The Spetses Summer Schools
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2009 Riboclub Program
2019 RiboClub Program RNA: 20 Years of Discoveries In Association with the Gairdner Foundation September 22-27 - Hotel Chéribourg, Orford, Québec, Canada Organizing Committee: Allan Jacobson, Robert Singer, Adrian Krainer, Françoise Stutz, Yukihide Tomari, Sandra Wolin, Nehalkumar Thakor (ARRTI co-organizer for western Canada) and the RiboClub. Sunday, September 22, 2019 (Day1) 15:00 – 20:00 Registration / Coffee and cake 17:00 – 17:10 Welcome notes and Announcements Sherif Abou Elela RiboClub organizer and co-founder, Member of the Université de Sherbrooke RNA Group 17:15 – 17:45 Opening Lecture I: RNA Biology: Origins and Reflections Joan Steitz Sterling Professor of Molecular Biophysics and Biochemistry, Yale University First speakers of the RiboClub 1998 17:45 – 18:15 Opening Lecture II: RNA Biology: History of Discoveries Witold Filipowicz Professor of Biochemistry, Friedrich Miescher Institute for Biomedical Research 18:15 – 18:45 Special presentation by the recipient of the RiboClub 2009 life achievement award: Initiating the study of Initiation: Initiating translation initiation: a short history and perspective Nahum Sonenberg, Member of the RiboClub, Gilman Cheney Chair in Biochemistry, McGill University 18:45 – 19:45 Cocktail and social time 19:45 – 19:50 Introduction of members of the community and dignitaries Raymund Wellinger Master of ceremonies, Co-founder of the Université de Sherbrooke RNA group, 19:50 – 19:50 Welcome note Pierre Cossette President, Université de Sherbrooke 19:50 – 20:45 Networking Dinner 20:45 – 20:55 -
The Ins and Outs of Circadian Timekeeping Steven a Brown* and Ueli Schibler†
gd9507.qxd 11/10/1999 12:14 PM Page 588 588 The ins and outs of circadian timekeeping Steven A Brown* and Ueli Schibler† Recent research in Drosophila and in mammals has generated The mechanism by which light signals entrain the clock is fascinating new models for how circadian clocks in these another topic of intense interest, and will be our other focus. organisms are reset by light and how these clocks, in turn, direct circadian outputs. Though light perception by the central clock is Central clock mechanisms: a brief summary ocular in mammals, it probably proceeds via a mechanism In all cases examined to date, circadian clocks have been separate from traditional visual transduction. In Drosophila, one cell-autonomous: a single cell can generate and maintain mechanism is non-ocular and is in fact present in many different self-sustained circadian oscillations. The molecular basis tissues. In both organisms, the cryptochrome family of for these rhythms may rely on a negative feedback loop in photoreceptor-like molecules plays a role in the circadian clock, which clock proteins negatively regulate their own abun- though their function is incompletely understood. Moreover, dance or activity. This regulation may occur both at the although a master clock resides in the brain, a functional clock transcriptional and at the post-transcriptional level. For appears to reside in most cells of the body. In these tissues, at example, in the bread mold Neurospora crassa, the Fre- least some output genes are controlled at the transcriptional quency protein negatively regulates its own transcription level directly by clock proteins; others appear to be regulated by by interfering with the ability of the White-collar-1 and cascades of circadian transcription factors. -
ED611743.Pdf
ISSN 1849-7209 FACULTY OF EDUCATION JOSIP JURAJ STROSSMAYER UNIVERSITY OF OSIJEK CROATIAN ACADEMY OF SCIENCES AND ARTS THE CENTER FOR SCIENTIFIC WORK IN VINKOVCI EDITORS VESNICA MLINAREVIĆ, MAJA BRUST NEMET, JASMINA HUSANOVIĆ PEHAR INTERCULTURAL EDUCATION OBRAZOVANJE ZA INTERKULTURALIZAM CONFERENCE PROCEEDINGS 4th International Scientific and Professional Conference INTERCULTURAL EDUCATION Osijek, September 17th – 18th 2020 OSIJEK, 2021 Title Intercultural Education Obrazovanje za interkulturalizam Publisher Faculty of Education, Josip Juraj Strossmayer University of Osijek, Republic of Croatia Croatian Academy of Sciences and Arts, the Center for Scientific Work in Vinkovci, Republic of Croatia For the publisher Damir Matanović, PhD, Professor Editors Vesnica Mlinarević, PhD, Professor (Republic of Croatia) Maja Brust Nemet, PhD, Assistant Professor (Republic of Croatia) Jasmina Husanović Pehar, PhD, Associate Professor (Bosnia and Herzegovina) Technical editor Maja Brust Nemet, PhD, Assistant Professor Proofreading Ivana Moritz, PhD, Assistant Professor Cover design Goran Kujundžić, PhD, Associate Professor in Art Prepress and printing Zebra, Vinkovci January, 2021 ISSN 1849-7209 All rights reserved. No part of this book may be reproduced or utilized in any form of by any means, without permission in writing form from the publisher. Edition 150 copies Reviewers of Conference Proceedings Damir Arsenijević, PhD, Professor (Bosnia and Herzegovina) Smiljana Zrilić, PhD, Professor (Republic of Croatia) Reviewers of papers Josip Ivanović, -
2009 Riboclub Program
RiboClub 2017 in association with the Swiss National Center of Competence in RNA & Disease. September 24-28 RNPs: the Good, the Bad and the Ugly Insights into RNA-protein complex assembly and function in health and disease Hotel et Villégiature Chéribourg 2603 Chemin du Parc Orford (Magog) Quebec, Canada Sunday, September 24th 15:00 – 18:00 Registration for early arrivals 18:00 – 19:30 Welcome reception 19:30 – 21:30 Opening dinner Monday, September 25th 08:00 – 08:45 Registration 08:45 – 08:55 Opening Notes and Announcements (Sherif Abou Elela) 08:55 – 09:10 Welcome Notes by Beat Nobs, Ph.D., Swiss Ambassador to Canada 09:10 – 09:15 Presentation of Keynote speaker (Oliver Mühlemann) 09:15 – 10:15 Keynote presentation From bench to clinical trial: microRNA 122 as an antiviral target for hepatitis C virus Peter Sarnow, Stanford University, Stanford 10:15 – 10:45 Coffee break Session 1: Non-coding RNA function Chair: Martin Jinek (Host: Benoit Chabot) 10:45 – 10:50 Introduction by Martin Jinek 10:50 – 11:05 Mbnl1-dependent mis-regulation and mis-splicing of a conserved myogenic lncRNA in myotonic dystrophy type 1 Pascal Chartrand, Universite de Montreal, Montreal 11:05 – 11:30 Non-canonical function of DGCR8 controls mESCs exit from pluripotency Constance Ciaudo, ETH Zurich, Zurich 11:30 – 11:45 microRNAs use different ways to regulate gene expression in animals Martin Simard, Universite Laval, Quebec 11:45 – 12:10 Structure, evolution and targeting of non coding RNAs Gabriele Varani, University of Washington, Seattle 12:10 – 12:35 Structural -
Female Fellows of the Royal Society
Female Fellows of the Royal Society Professor Jan Anderson FRS [1996] Professor Ruth Lynden-Bell FRS [2006] Professor Judith Armitage FRS [2013] Dr Mary Lyon FRS [1973] Professor Frances Ashcroft FMedSci FRS [1999] Professor Georgina Mace CBE FRS [2002] Professor Gillian Bates FMedSci FRS [2007] Professor Trudy Mackay FRS [2006] Professor Jean Beggs CBE FRS [1998] Professor Enid MacRobbie FRS [1991] Dame Jocelyn Bell Burnell DBE FRS [2003] Dr Philippa Marrack FMedSci FRS [1997] Dame Valerie Beral DBE FMedSci FRS [2006] Professor Dusa McDuff FRS [1994] Dr Mariann Bienz FMedSci FRS [2003] Professor Angela McLean FRS [2009] Professor Elizabeth Blackburn AC FRS [1992] Professor Anne Mills FMedSci FRS [2013] Professor Andrea Brand FMedSci FRS [2010] Professor Brenda Milner CC FRS [1979] Professor Eleanor Burbidge FRS [1964] Dr Anne O'Garra FMedSci FRS [2008] Professor Eleanor Campbell FRS [2010] Dame Bridget Ogilvie AC DBE FMedSci FRS [2003] Professor Doreen Cantrell FMedSci FRS [2011] Baroness Onora O'Neill * CBE FBA FMedSci FRS [2007] Professor Lorna Casselton CBE FRS [1999] Dame Linda Partridge DBE FMedSci FRS [1996] Professor Deborah Charlesworth FRS [2005] Dr Barbara Pearse FRS [1988] Professor Jennifer Clack FRS [2009] Professor Fiona Powrie FRS [2011] Professor Nicola Clayton FRS [2010] Professor Susan Rees FRS [2002] Professor Suzanne Cory AC FRS [1992] Professor Daniela Rhodes FRS [2007] Dame Kay Davies DBE FMedSci FRS [2003] Professor Elizabeth Robertson FRS [2003] Professor Caroline Dean OBE FRS [2004] Dame Carol Robinson DBE FMedSci -
DARIA SIEKHAUS, Ph.D
DARIA SIEKHAUS, Ph.D. Address: Institute of Science and Technology (IST) Austria Am Campus 1 Bertalanffy Building 3400 Klosterneuburg Austria Telephone: 0043 664 886 876 96 E-mail: [email protected] Birthplace: Berkeley, California, United States Nationality: USA EDUCATION: Stanford University, Department of Biochemistry, Stanford, CA, Ph.D. 1998 Harvard and Radcliffe Colleges, Cambridge, MA, B.A. in Biology, magna cum laude, 1987 RESEARCH EXPERIENCE: Assistant Professor ‐ IST Austria. Jan 2012‐ present Research Scientist – New York University Medical Center, Skirball Institute, Dept. of Developmental Genetics Advisor: Ruth Lehmann, Ph.D. Understanding the mechanism of invasive migration in Drosophila immune cells. 2003‐2011 Post‐doctoral Fellow – University of California Berkeley, Dept. of Molecular Cell Biology Advisor: David Drubin, Ph.D. Understanding the interpretation of chemotropic gradients in S. cerevisiae through cell biological and genetic analyses. 1999‐2003 Graduate Student – Stanford University, Dept. of Biochemistry Advisors: Robert S. Fuller, Ph.D., Mark A. Krasnow, M.D. Ph.D. Identification, and genetic and functional characterization of the neuropeptide and prohormone processing proteases in Drosophila involved in hatching behavior at the end of embryogenesis. 1989-1998 Deutscher Akademischer Austauschdienst Fellow – Max Planck Institute for Biophysical Chemistry, Göttingen, Germany Advisor: Peter Gruss, Ph.D. Expression, purification and biochemical characterization of the murine neuron specific zinc finger gene, -
Driving Diffusion of Scientific Innovation
Driving Diffusion of Scientific Innovation - The Role of Institutional Entrepreneurship and Open Science in Synthetic Biology Vom Promotionsausschuss der Technischen Universit¨at Hamburg-Harburg zur Erlangung des akademischen Grades Doktor der Wirtschafts- und Sozialwissenschaften (Dr. rer. pol.) genehmigte Dissertation von Giulio Barth aus M¨unster 2018 Advisors: Prof. Dr. C. Ihl, Prof. Dr. M. G. M¨ohrle Institute of Entrepreneurship, TUHH i Gutachter: Prof. Dr. C. Ihl Prof. Dr. M. G. Mohrle¨ Vorsitz: Prof. Dr. C. Luthje¨ Tag der mundlichen¨ Prufung:¨ 14. September 2018 ”Our victory: inevitable; our timing: uncertain.” (Drew Endy, Assistant Professor Stanford University) i Abstract Scientific innovations need to widely diffuse to fully exploit their potential. Prior research investigated levers on the diffusion of scientific innovation with particular interest on institutions, e.g., settings of property rights. As institutional theory lacks in explaining emergence and shaping of institu- tions, the institutional entrepreneur approach faces these limitations. Key actors combine logics from multiple fields and convince their social context of their ideas to legitimate the creation of new institutions and shape an emerging field. This thesis validates theories on institutional entrepreneurs and investigates the end-to process from diffusing a logic to the impact of an established insti- tution on scientific innovations in context of the emerging synthetic biology. The field is expected to introduce the 5th revolution and characterized by the central logic of making biology an engineering discipline. In chapter 4 theories on institutional entrepreneurs driving diffusion of in- stitutional logics to shape an emerging field are validated. To measure the social influence mechanisms, the heterogeneous diffusion model is adapted to the institutional logic. -
2013 Annual Report
2013 ANNUAL REPORT PETER WALL INSTITUTE FOR ADVANCED STUDIES The Institute is committed foremost to excellence in research; its goal is to stimulate collaborative, creative, innovative interdisciplinary research that makes important advances in knowledge. A guiding principle is that excellence and truly innovative research are achieved in a highly collaborative international research environment at the University of British Columbia, where UBC scholars have sustained opportunity to exchange ideas with national and international scholars, to work together on innovative research, develop new thinking that is beyond disciplinary boundaries, and engage in intellectual risk-taking. The Institute respects diversity of perspectives and backgrounds, research embedded in the community and integration of multimodal and expressive arts as an important component of research across all disciplines. The Institute is committed to wise stewardship of its resources in continuing to build on its significant research accomplishments. TABLE OF CONTENTS 04 Message from the Director 06 UBIAS Conference INTERNATIONAL PROGRAMS 10 International Visiting Research Scholar 14 UBC Visiting Scholar Abroad 18 International Research Roundtables 28 International Distinguished Visiting Professors 32 International Partnerships 36 Major Thematic Grant 39 French Lecture Series 40 Exploratory Workshops NATIONAL PROGRAMS 44 Peter Wall Distinguished Professor 48 Distinguished Scholars in Residence 54 Early Career Scholars 64 The Wall Exchange 66 The Wall Hour 70 Associate Research Fora 74 Theme Development Workshop 76 Research Mentoring Program 78 Colloquia 79 Special Events PETER WALL SOLUTIONS INITIATIVE 80 Program Review and Highlights ABOUT THE INSTITUTE 84 Funding and Governance 86 Committies 88 The Institute 90 Director and Staff Director’s Message Excellence in research is the Institute’s primary goal, creating the environment for collaborative, creative, interdisciplinary research that makes important advances in knowledge. -
Mapping of Shigella Flexneri's Tissue Distribution and Type III Secretion Apparatus Activity During Infection of the Large I
Mapping of Shigella flexneri’s tissue distribution and type III secretion apparatus activity during infection of the large intestine of guinea pigs Giulia Nigro, Ellen Arena, Martin Sachse, Maryse Moya-Nilges, Benoit Marteyn, Philippe Sansonetti, F-X Campbell-Valois To cite this version: Giulia Nigro, Ellen Arena, Martin Sachse, Maryse Moya-Nilges, Benoit Marteyn, et al.. Mapping of Shigella flexneri’s tissue distribution and type III secretion apparatus activity during infection of the large intestine of guinea pigs. Pathogens and Disease, Oxford University Press, 2019, 77 (7), pp.ftz054,. 10.1093/femspd/ftz054. hal-02429855 HAL Id: hal-02429855 https://hal.archives-ouvertes.fr/hal-02429855 Submitted on 13 Jan 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution - NonCommercial| 4.0 International License Pathogens and Disease, 77, 2019, ftz054 doi: 10.1093/femspd/ftz054 Advance Access Publication Date: 3 October 2019 Research Article RESEARCH ARTICLE Mapping of Shigella flexneri’s tissue distribution and type III secretion apparatus activity during infection of the large intestine of guinea pigs Giulia Nigro1, Ellen T. Arena1,2, Martin Sachse3, Maryse Moya-Nilges3, Benoit S. -
Mechanisms Directing Receptor-Specific Gene Regulation
Mechanisms Directing Receptor-Specific Gene Regulation by the Androgen and Glucocorticoid Receptor Inaugural-Dissertation to obtain the academic degree Doctor rerum naturalium (Dr. rer. nat.) submitted to the Department of Biology, Chemistry, Pharmacy of Freie Universität Berlin by Marina Kulik • 2021 The dissertation was prepared under the supervision of Dr. Sebastiaan H. Meijsing at the Max Planck Institute for Molecular Genetics in Berlin from September 2015 to February 2021. 1st Reviewer: Dr. Sebastiaan Meijsing 2nd Reviewer: Prof. Dr. Markus Wahl Date of defense: 21.05.2021 1 Selbstständigkeitserklärung Hiermit bestätige ich, dass ich die vorliegende Arbeit selbstständig und unter Zuhilfenahme der angegebenen Literatur erstellt habe. Acknowledgments First of all, I would like to express my gratitude to my supervisor Sebastiaan Meijsing for his support and guidance during my PhD. I would like to thank Martin Vingron for the opportunity to be part of his research group and for the great collaborations. Especially, I would like to thank Stefan Haas for introducing me to the world of RNA-seq and Gözde Kibar, who contributed with her bioinformatical analyses to this work. I would like to thank Sarah Kinkley for her support and for giving me the opportunity to finish my PhD in her group. I wish to thank Stefan Prekovic, Isabel Mayayo-Peralta and Wilbert Zwart from the NKI in Amsterdam for sharing their expertise in “nuclear signaling” and the great collaboration. I am particularly grateful to Melissa Bothe, her computational analyses and support in the lab contributed a lot to this work. My special gratitude goes to Laura Glaser for her continuous advice and for freezing my cells in the evening countless times. -
Watching Dynamics and Assembly of Spliceosomal
WATCHING DYNAMICS AND ASSEMBLY OF SPLICEOSOMAL COMPLEXES AT SINGLE MOLECULE RESOLUTION A thesis submitted for the degree of DOCTOR OF PHILOSOPHY 2015 CHANDANI MANOJA WARNASOORIYA Section of Virology, Department of Medicine Imperial College London 1 Copyright Declaration The copyright of this thesis rests with the author and is made available under a Creative Commons Attribution Non-Commercial No Derivatives licence. Researchers are free to copy, distribute or transmit the thesis on the condition that they attribute it, that they do not use it for commercial purposes and that they do not alter, transform or build upon it. For any reuse or redistribution, researchers must make clear to others the licence terms of this work. 2 Declaration of Origin I hereby declare that this project was entirely my own work (except the gel images in figures 4.2-4.5 in the chapter 4) and that any additional sources of information have been properly cited. I hereby declare that any internet sources, published and unpublished works from which I have quoted or drawn reference have been referenced fully in the text and in the reference list. I understand that failure to do so will result in failure of this project due to plagiarism. Chapter 3 was in collaboration with Prof. Samuel Butcher and Prof. David Brow at University of Wisconsin-Madison, Wisconsin, USA. The Prp24 full length protein and the truncated protein (234C) were provided by them. Chapter 4 was in collaboration with Prof. Kiyoshi Nagai and his lab members Dr. John Hardin and Yasushi Kondo at LMB Cambridge University, Cambridge, UK. -
Structural and Functional Characterization of the N-Terminal Acetyltransferase Natc
Structural and functional characterization of the N-terminal acetyltransferase NatC Inaugural-Dissertation to obtain the academic degree Doctor rerum naturalium (Dr. rer. nat.) submitted to the Department of Biology, Chemistry, Pharmacy of Freie Universität Berlin by Stephan Grunwald Berlin October 01, 2019 Die vorliegende Arbeit wurde von April 2014 bis Oktober 2019 am Max-Delbrück-Centrum für Molekulare Medizin unter der Anleitung von PROF. DR. OLIVER DAUMKE angefertigt. Erster Gutachter: PROF. DR. OLIVER DAUMKE Zweite Gutachterin: PROF. DR. ANNETTE SCHÜRMANN Disputation am 26. November 2019 iii iv Erklärung Ich versichere, dass ich die von mir vorgelegte Dissertation selbstständig angefertigt, die benutzten Quellen und Hilfsmittel vollständig angegeben und die Stellen der Arbeit – einschließlich Tabellen, Karten und Abbildungen – die anderen Werken im Wortlaut oder dem Sinn nach entnommen sind, in jedem Einzelfall als Entlehnung kenntlich gemacht habe; und dass diese Dissertation keiner anderen Fakultät oder Universität zur Prüfung vorgelegen hat. Berlin, 9. November 2020 Stephan Grunwald v vi Acknowledgement I would like to thank Prof. Oliver Daumke for giving me the opportunity to do the research for this project in his laboratory and for the supervision of this thesis. I would also like to thank Prof. Dr. Annette Schürmann from the German Institute of Human Nutrition (DifE) in Potsdam-Rehbruecke for being my second supervisor. From the Daumke laboratory I would like to especially thank Dr. Manuel Hessenberger, Dr. Stephen Marino and Dr. Tobias Bock-Bierbaum, who gave me helpful advice. I also like to thank the rest of the lab members for helpful discussions. I deeply thank my wife Theresa Grunwald, who always had some helpful suggestions and kept me alive while writing this thesis.