Size Assessment in Polychaete Worms—Application of Morphometric Correlations for Common North Atlantic Taxa
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Annelida, Phyllodocida)
A peer-reviewed open-access journal ZooKeys 488: 1–29Guide (2015) and keys for the identification of Syllidae( Annelida, Phyllodocida)... 1 doi: 10.3897/zookeys.488.9061 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Guide and keys for the identification of Syllidae (Annelida, Phyllodocida) from the British Isles (reported and expected species) Guillermo San Martín1, Tim M. Worsfold2 1 Departamento de Biología (Zoología), Laboratorio de Biología Marina e Invertebrados, Facultad de Ciencias, Universidad Autónoma de Madrid, Canto Blanco, 28049 Madrid, Spain 2 APEM Limited, Diamond Centre, Unit 7, Works Road, Letchworth Garden City, Hertfordshire SG6 1LW, UK Corresponding author: Guillermo San Martín ([email protected]) Academic editor: Chris Glasby | Received 3 December 2014 | Accepted 1 February 2015 | Published 19 March 2015 http://zoobank.org/E9FCFEEA-7C9C-44BF-AB4A-CEBECCBC2C17 Citation: San Martín G, Worsfold TM (2015) Guide and keys for the identification of Syllidae (Annelida, Phyllodocida) from the British Isles (reported and expected species). ZooKeys 488: 1–29. doi: 10.3897/zookeys.488.9061 Abstract In November 2012, a workshop was carried out on the taxonomy and systematics of the family Syllidae (Annelida: Phyllodocida) at the Dove Marine Laboratory, Cullercoats, Tynemouth, UK for the National Marine Biological Analytical Quality Control (NMBAQC) Scheme. Illustrated keys for subfamilies, genera and species found in British and Irish waters were provided for participants from the major national agencies and consultancies involved in benthic sample processing. After the workshop, we prepared updates to these keys, to include some additional species provided by participants, and some species reported from nearby areas. -
Polychaetes Associated with a Tropical Ocean Outfall: Synthesis of a Biomonitoring Program Off O'ahu, Hawai'f
Polychaetes Associated with a Tropical Ocean Outfall: Synthesis ofa Biomonitoring Program off O'ahu, Hawai'F J. H. Bailey-Brock,2,3,4,5 B. Paavo,3,4 B. M. Barrett,3,4 and J. Dreyer3,4 Abstract: A comparison of benthic polychaete communities off the Sand Island Wastewater Outfall was undertaken to recognize organic enrichment indicator species for Hawaiian waters. Primary-treatment sewage is discharged off the south shore of O'ahu at 70 m depth. A historical data set spanning 9 yr for seven sites at 70 m and two recent studies at 20, 50, and 100 m depths were analyzed. Geochemical data did not support the assumption that the outfall is an im portant source of organic enrichment in nutrient-poor sandy sediments within oligotrophic tropical waters. Five polychaete species, however, appeared partic ularly sensitive, positively or negatively, to environmental conditions near the outfall. Neanthes arenaceodentata (Nereididae) and Ophryotrocha adherens (Dor villeidae) have been dominant at sites within the outfall's zone of initial dilution (ZID). Since 1993, N arenaceodentata has virtually disappeared, and 0. adherens concurrently became abundant and continued to flourish at ZID sites. Well known indicators within the Capitella capitata complex (Capitellidae) were pres ent at ZID and control (far field) sites though their ZID abundance was greater. Two sabellids, Euchone sp. Band Augeneriella dubia were inversely distributed, the smaller Euchone sp. B at far field sites and larger A. dubia within ZID sta tions. The former was most likely restricted to a greater proportion offine sed iment particles at two far field sites. -
Boccardia Proboscidea Class: Polychaeta, Sedentaria, Canalipalpata
Phylum: Annelida Boccardia proboscidea Class: Polychaeta, Sedentaria, Canalipalpata Order: Spionida, Spioniformia A burrowing spionid worm Family: Spionidae Taxonomy: Boccardia proboscidea’s senior Trunk: subjective synonym, Polydora californica Posterior: Pygidium is a round, flaring (Treadwell, 1914) and an un-typified name, disc with four unequal lobes where dorsal Spio californica (Fewkes, 1889) were both lobes are smaller (Fig. 4) (Hartman 1969). suppressed in 2012 by the International Parapodia: Biramous after first setiger. Commission on Zoological Nomenclature Podia on the first setiger are not lobed, small (ICZN, case 3520). The widely cited and and inconspicuous. The second setiger's used name, Boccardia proboscidea parapodial lobes become twice as large as (Hartman, 1940) was conserved (ICZN the first's, and continue to worm posterior. 2012). Setae (chaetae): All setae are simple and in- clude bunches of short, capillary spines to se- Description tiger six (except for modified setiger five) Size: Specimens up to 30–35 mm in length (Figs. 5a, b). A transverse row of and 1.5 mm in width, where length extends approximately eight neuropodial uncini with age (Hartman 1940). The illustrated (hooded hooks) with bifid (two-pronged) tips specimen has approximately 130 segments begins on setiger seven and continues to (Fig. 1). posterior end (Fig. 5e), with bunches of Color: Yellow-orange with red branchiae capillary setae below them (until setiger 11). and dusky areas around prostomium and Notosetae of setiger five are heavy, dark and parapodia (Hartman 1969). Sato-Okoshi arranged vertically in two rows of five with and Okoshi (1997) report black pigment fol- pairs of long, falcate spines (Fig. -
Chaetal Type Diversity Increases During Evolution of Eunicida (Annelida)
Org Divers Evol (2016) 16:105–119 DOI 10.1007/s13127-015-0257-z ORIGINAL ARTICLE Chaetal type diversity increases during evolution of Eunicida (Annelida) Ekin Tilic1 & Thomas Bartolomaeus1 & Greg W. Rouse2 Received: 21 August 2015 /Accepted: 30 November 2015 /Published online: 15 December 2015 # Gesellschaft für Biologische Systematik 2015 Abstract Annelid chaetae are a superior diagnostic character Keywords Chaetae . Molecular phylogeny . Eunicida . on species and supraspecific levels, because of their structural Systematics variety and taxon specificity. A certain chaetal type, once evolved, must be passed on to descendants, to become char- acteristic for supraspecific taxa. Therefore, one would expect Introduction that chaetal diversity increases within a monophyletic group and that additional chaetae types largely result from transfor- Chaetae in annelids have attracted the interest of scientist for a mation of plesiomorphic chaetae. In order to test these hypoth- very long time, making them one of the most studied, if not the eses and to explain potential losses of diversity, we take up a most studied structures of annelids. This is partly due to the systematic approach in this paper and investigate chaetation in significance of chaetal features when identifying annelids, Eunicida. As a backbone for our analysis, we used a three- since chaetal structure and arrangement are highly constant gene (COI, 16S, 18S) molecular phylogeny of the studied in species and supraspecific taxa. Aside from being a valuable eunicidan species. This phylogeny largely corresponds to pre- source for taxonomists, chaetae have also been the focus of vious assessments of the phylogeny of Eunicida. Presence or many studies in functional ecology (Merz and Edwards 1998; absence of chaetal types was coded for each species included Merz and Woodin 2000; Merz 2015; Pernet 2000; Woodin into the molecular analysis and transformations for these char- and Merz 1987). -
Development of a Multi-Trophic Level Metabarcoding Tool for Benthic Monitoring of Aquaculture Farms
REPORT NO. 2980 DEVELOPMENT OF A MULTI-TROPHIC LEVEL METABARCODING TOOL FOR BENTHIC MONITORING OF AQUACULTURE FARMS CAWTHRON INSTITUTE | REPORT NO. 2980 JANUARY 2017 DEVELOPMENT OF A MULTI-TROPHIC LEVEL METABARCODING TOOL FOR BENTHIC MONITORING OF AQUACULTURE FARMS XAVIER POCHON, NIGEL KEELEY, SUSIE WOOD Prepared for Seafood Innovation Limited Ltd, New Zealand King Salmon Ltd, Ngāi Tahu Seafood, the Ministry for Primary Industries, Waikato Regional Council, and the Marlborough District Council CAWTHRON INSTITUTE 98 Halifax Street East, Nelson 7010 | Private Bag 2, Nelson 7042 | New Zealand Ph. +64 3 548 2319 | Fax. +64 3 546 9464 www.cawthron.org.nz REVIEWED BY: APPROVED FOR RELEASE BY: Anastasija Zaiko Chris Cornelisen ISSUE DATE: 16 January 2017 RECOMMENDED CITATION: Pochon X, Keeley N, Wood S 2017. Development of a new molecular tool for biomonitoring New Zealand’s fish farms. Prepared for Seafood Innovation Limited Ltd, New Zealand King Salmon Ltd, Ngāi Tahu Seafood, the Ministry for Primary Industries, Waikato Regional Council, and the Marlborough District Council Cawthron Report No. 2980. 48 p. plus appendices. © COPYRIGHT This publication must not be reproduced or distributed, electronically or otherwise, in whole or in part without the written permission of the Copyright Holder, which is the party that commissioned the report. CAWTHRON INSTITUTE | REPORT NO. 2980 JANUARY 2017 EXECUTIVE SUMMARY The Cawthron Institute was commissioned by a range of private and government agencies and industry partners to develop a molecular-based tool for assessing benthic impacts associated with salmon farming practices in New Zealand. The analysis was undertaken using cutting-edge molecular techniques, with the view that over time these rapidly evolving techniques could be integrated into the current suite of assessment tools routinely used by industry partners and stakeholders. -
A New Species of Ampharete (Annelida: Ampharetidae) from The
European Journal of Taxonomy 531: 1–16 ISSN 2118-9773 https://doi.org/10.5852/ejt.2019.531 www.europeanjournaloftaxonomy.eu 2019 · Parapar J. et al. This work is licensed under a Creative Commons Attribution License (CC BY 4.0). Research article A new species of Ampharete (Annelida: Ampharetidae) from the West Shetland shelf (NE Atlantic Ocean), with two updated keys to the species of the genus in North Atlantic waters Julio PARAPAR 1,*, Juan MOREIRA 2 & Ruth BARNICH 3 1 Departamento de Bioloxía, Universidade da Coruña, Rúa da Fraga 10, 15008 A Coruña, Galicia, Spain. 2 Departamento de Biología (Zoología), Facultad de Ciencias, Universidad Autónoma de Madrid, 28049 Madrid, Spain. 2 Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, 28049 Madrid, Spain. 3 Thomson Unicomarine Ltd., Compass House, Surrey Research Park, Guildford, GU2 7AG, United Kingdom. * Corresponding author: [email protected] 2 Email: [email protected] 3 Email: [email protected] 1urn:lsid:zoobank.org:author:CE188F30-C9B0-44B1-8098-402D2A2F9BA5 2urn:lsid:zoobank.org:author:B1E38B9B-7751-46E0-BEFD-7C77F7BBBEF0 3urn:lsid:zoobank.org:author:F1E3AEB7-0C77-41BB-8A6C-F8B429F17DA1 Abstract. Ampharete oculicirrata sp. nov. (Annelida: Ampharetidae) is described from samples collected by the Joint Nature Conservation Committee and Marine Scotland Science, in the West Shetland Shelf NCMPA in the NE Atlantic. This species is characterised by a very small body size, thin and slender paleae, twelve thoracic and eleven abdominal uncinigers, presence of eyes both in the prostomium and the pygidium, the latter provided with a pair of long lateral cirri. -
A Bioturbation Classification of European Marine Infaunal
A bioturbation classification of European marine infaunal invertebrates Ana M. Queiros 1, Silvana N. R. Birchenough2, Julie Bremner2, Jasmin A. Godbold3, Ruth E. Parker2, Alicia Romero-Ramirez4, Henning Reiss5,6, Martin Solan3, Paul J. Somerfield1, Carl Van Colen7, Gert Van Hoey8 & Stephen Widdicombe1 1Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH, U.K. 2The Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 OHT, U.K. 3Department of Ocean and Earth Science, National Oceanography Centre, University of Southampton, Waterfront Campus, European Way, Southampton SO14 3ZH, U.K. 4EPOC – UMR5805, Universite Bordeaux 1- CNRS, Station Marine d’Arcachon, 2 Rue du Professeur Jolyet, Arcachon 33120, France 5Faculty of Biosciences and Aquaculture, University of Nordland, Postboks 1490, Bodø 8049, Norway 6Department for Marine Research, Senckenberg Gesellschaft fu¨ r Naturforschung, Su¨ dstrand 40, Wilhelmshaven 26382, Germany 7Marine Biology Research Group, Ghent University, Krijgslaan 281/S8, Ghent 9000, Belgium 8Bio-Environmental Research Group, Institute for Agriculture and Fisheries Research (ILVO-Fisheries), Ankerstraat 1, Ostend 8400, Belgium Keywords Abstract Biodiversity, biogeochemical, ecosystem function, functional group, good Bioturbation, the biogenic modification of sediments through particle rework- environmental status, Marine Strategy ing and burrow ventilation, is a key mediator of many important geochemical Framework Directive, process, trait. processes in marine systems. In situ quantification of bioturbation can be achieved in a myriad of ways, requiring expert knowledge, technology, and Correspondence resources not always available, and not feasible in some settings. Where dedi- Ana M. Queiros, Plymouth Marine cated research programmes do not exist, a practical alternative is the adoption Laboratory, Prospect Place, The Hoe, Plymouth PL1 3DH, U.K. -
Thelepus Crispus Class: Polychaeta, Sedentaria, Canalipalpata
Phylum: Annelida Thelepus crispus Class: Polychaeta, Sedentaria, Canalipalpata Order: Terebellida, Terebellomorpha A terebellid worm Family: Terebellidae, Theleponinae Description (Hartman 1969). Notosetae present from Size: Individuals range in size from 70–280 second branchial segment (third body mm in length (Hartman 1969). The greatest segment) and continue almost to the worm body width at segments 10–16 is 13 mm (88 posterior (to 14th segment from end in mature –147 segments). The dissected individual specimens) (Hutchings and Glasby 1986). All on which this description is based was 120 neurosetae short handled, avicular (bird-like) mm in length (from Coos Bay, Fig. 1). uncini, imbedded in a single row on oval- Color: Pinkish orange and cream with bright shaped tori (Figs. 3, 5) where the single row red branchiae, dark pink prostomium and curves into a hook, then a ring in latter gray tentacles and peristomium. segments (Fig. 3). Each uncinus bears a General Morphology: Worm rather stout thick, short fang surmounted by 4–5 small and cigar-shaped. teeth (Hartman 1969) (two in this specimen) Body: Two distinct body regions consisting (Fig. 4). Uncini begin on the fifth body of a broad thorax with neuro- and notopodia segment (third setiger), however, Johnson and a tapering abdomen with only neuropo- (1901) and Hartman (1969) have uncini dia. beginning on setiger two. Anterior: Prostomium reduced, with Eyes/Eyespots: None. ample dorsal flap transversely corrugated Anterior Appendages: Feeding tentacles are dorsally (Fig. 5). Peristomium with circlet of long (Fig. 1), filamentous, white and mucus strongly grooved, unbranched tentacles (Fig. covered. 5), which cannot be retracted fully (as in Am- Branchiae: Branchiae present (subfamily pharctidae). -
Molecular Phylogeny of the Family Capitellidae (Annelida)
Title Molecular Phylogeny of the Family Capitellidae (Annelida) Author(s) Tomioka, Shinri; Kakui, Keiichi; Kajihara, Hiroshi Zoological Science, 35(5), 436-445 Citation https://doi.org/10.2108/zs180009 Issue Date 2018-10 Doc URL http://hdl.handle.net/2115/75605 Type article File Information Zoological Science35-5_436‒445(2018).pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP ZOOLOGICAL436 SCIENCE 35: 436–445 (2018) S. Tomioka et al. © 2018 Zoological Society of Japan Molecular Phylogeny of the Family Capitellidae (Annelida) Shinri Tomioka1*, Keiichi Kakui2, and Hiroshi Kajihara2 1Rishiri Town Museum, Senhoshi, Rishiri Is., Hokkaido 097-0311, Japan 2Department of Biological Sciences, Faculty of Science, Hokkaido University, N10 W8, Sapporo, Hokkaido 060-0810, Japan Capitellids have emerged as monophyletic in most but not all recent molecular phylogenies, indi- cating that more extensive taxon sampling is necessary. In addition, monophyly of most or all capitellid genera was questionable, as some diagnostic characters vary ontogenetically within individuals. We tested the monophyly of Capitellidae and eight capitellid genera using phyloge- netic analyses of combined 18S, 28S, H3, and COI gene sequences from 36 putative capitellid spe- cies. In our trees, Capitellidae formed a monophyletic sister group to Echiura, and Capitella was also monophyletic, separated by a long branch from other capitellids. Well-supported clades each containing representatives of different genera, or containing a subset of species within a genus, indicated that Barantolla, Heteromastus, and Notomastus are likely not monophyletic. We mapped three morphological characters traditionally used to define capitellid genera (head width relative to width of first segment, number of thoracic segments, and number of segments with capillary chae- tae) onto our tree. -
OREGON ESTUARINE INVERTEBRATES an Illustrated Guide to the Common and Important Invertebrate Animals
OREGON ESTUARINE INVERTEBRATES An Illustrated Guide to the Common and Important Invertebrate Animals By Paul Rudy, Jr. Lynn Hay Rudy Oregon Institute of Marine Biology University of Oregon Charleston, Oregon 97420 Contract No. 79-111 Project Officer Jay F. Watson U.S. Fish and Wildlife Service 500 N.E. Multnomah Street Portland, Oregon 97232 Performed for National Coastal Ecosystems Team Office of Biological Services Fish and Wildlife Service U.S. Department of Interior Washington, D.C. 20240 Table of Contents Introduction CNIDARIA Hydrozoa Aequorea aequorea ................................................................ 6 Obelia longissima .................................................................. 8 Polyorchis penicillatus 10 Tubularia crocea ................................................................. 12 Anthozoa Anthopleura artemisia ................................. 14 Anthopleura elegantissima .................................................. 16 Haliplanella luciae .................................................................. 18 Nematostella vectensis ......................................................... 20 Metridium senile .................................................................... 22 NEMERTEA Amphiporus imparispinosus ................................................ 24 Carinoma mutabilis ................................................................ 26 Cerebratulus californiensis .................................................. 28 Lineus ruber ......................................................................... -
The Namanereidinae (Polychaeta: Nereididae). Part 1, Taxonomy and Phylogeny
© Copyright Australian Museum, 1999 Records of the Australian Museum, Supplement 25 (1999). ISBN 0-7313-8856-9 The Namanereidinae (Polychaeta: Nereididae). Part 1, Taxonomy and Phylogeny CHRISTOPHER J. GLASBY National Institute for Water & Atmospheric Research, PO Box 14-901, Kilbirnie, Wellington, New Zealand [email protected] ABSTRACT. A cladistic analysis and taxonomic revision of the Namanereidinae (Nereididae: Polychaeta) is presented. The cladistic analysis utilising 39 morphological characters (76 apomorphic states) yielded 10,000 minimal-length trees and a highly unresolved Strict Consensus tree. However, monophyly of the Namanereidinae is supported and two clades are identified: Namalycastis containing 18 species and Namanereis containing 15 species. The monospecific genus Lycastoides, represented by L. alticola Johnson, is too poorly known to be included in the analysis. Classification of the subfamily is modified to reflect the phylogeny. Thus, Namalycastis includes large-bodied species having four pairs of tentacular cirri; autapomorphies include the presence of short, subconical antennae and enlarged, flattened and leaf-like posterior cirrophores. Namanereis includes smaller-bodied species having three or four pairs of tentacular cirri; autapomorphies include the absence of dorsal cirrophores, absence of notosetae and a tripartite pygidium. Cryptonereis Gibbs, Lycastella Feuerborn, Lycastilla Solís-Weiss & Espinasa and Lycastopsis Augener become junior synonyms of Namanereis. Thirty-six species are described, including seven new species of Namalycastis (N. arista n.sp., N. borealis n.sp., N. elobeyensis n.sp., N. intermedia n.sp., N. macroplatis n.sp., N. multiseta n.sp., N. nicoleae n.sp.), four new species of Namanereis (N. minuta n.sp., N. serratis n.sp., N. stocki n.sp., N. -
Polychaete Worms Definitions and Keys to the Orders, Families and Genera
THE POLYCHAETE WORMS DEFINITIONS AND KEYS TO THE ORDERS, FAMILIES AND GENERA THE POLYCHAETE WORMS Definitions and Keys to the Orders, Families and Genera By Kristian Fauchald NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY In Conjunction With THE ALLAN HANCOCK FOUNDATION UNIVERSITY OF SOUTHERN CALIFORNIA Science Series 28 February 3, 1977 TABLE OF CONTENTS PREFACE vii ACKNOWLEDGMENTS ix INTRODUCTION 1 CHARACTERS USED TO DEFINE HIGHER TAXA 2 CLASSIFICATION OF POLYCHAETES 7 ORDERS OF POLYCHAETES 9 KEY TO FAMILIES 9 ORDER ORBINIIDA 14 ORDER CTENODRILIDA 19 ORDER PSAMMODRILIDA 20 ORDER COSSURIDA 21 ORDER SPIONIDA 21 ORDER CAPITELLIDA 31 ORDER OPHELIIDA 41 ORDER PHYLLODOCIDA 45 ORDER AMPHINOMIDA 100 ORDER SPINTHERIDA 103 ORDER EUNICIDA 104 ORDER STERNASPIDA 114 ORDER OWENIIDA 114 ORDER FLABELLIGERIDA 115 ORDER FAUVELIOPSIDA 117 ORDER TEREBELLIDA 118 ORDER SABELLIDA 135 FIVE "ARCHIANNELIDAN" FAMILIES 152 GLOSSARY 156 LITERATURE CITED 161 INDEX 180 Preface THE STUDY of polychaetes used to be a leisurely I apologize to my fellow polychaete workers for occupation, practised calmly and slowly, and introducing a complex superstructure in a group which the presence of these worms hardly ever pene- so far has been remarkably innocent of such frills. A trated the consciousness of any but the small group great number of very sound partial schemes have been of invertebrate zoologists and phylogenetlcists inter- suggested from time to time. These have been only ested in annulated creatures. This is hardly the case partially considered. The discussion is complex enough any longer. without the inclusion of speculations as to how each Studies of marine benthos have demonstrated that author would have completed his or her scheme, pro- these animals may be wholly dominant both in num- vided that he or she had had the evidence and inclina- bers of species and in numbers of specimens.