Direct Cytotoxic Activity of CD8+ T Cells Against Ichthyophthirius Multifiliis
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Biogeography and Evolution of the Carassius Auratus-Complex in East
Takada et al. BMC Evolutionary Biology 2010, 10:7 http://www.biomedcentral.com/1471-2148/10/7 RESEARCH ARTICLE Open Access Biogeography and evolution of the Carassius auratus-complex in East Asia Mikumi Takada1,2*, Katsunori Tachihara1, Takeshi Kon2, Gunji Yamamoto2, Kei’ichiro Iguchi3, Masaki Miya4, Mutsumi Nishida2 Abstract Background: Carassius auratus is a primary freshwater fish with bisexual diploid and unisexual gynogenetic triploid lineages. It is distributed widely in Eurasia and is especially common in East Asia. Although several genetic studies have been conducted on C. auratus, they have not provided clear phylogenetic and evolutionary descriptions of this fish, probably due to selection bias in sampling sites and the DNA regions analysed. As the first step in clarifying the evolutionary entity of the world’s Carassius fishes, we attempted to clarify the phylogeny of C. auratus populations distributed in East Asia. Results: We conducted a detailed analysis of a large dataset of mitochondrial gene sequences [CR, 323 bp, 672 sequences (528 sequenced + 144 downloaded); CR + ND4 + ND5 + cyt b, 4669 bp in total, 53 sequences] obtained from C. auratus in East Asia. Our phylogeographic analysis revealed two superlineages, one distributed mainly among the Japanese main islands and the other in various regions in and around the Eurasian continent, including the Ryukyus and Taiwan. The two superlineages include seven lineages with high regional specificity that are composed of endemic populations indigenous to each region. The divergence time of the seven lineages was estimated to be 0.2 million years ago (Mya) by a fossil-based method and 1.0-1.9 Mya by the molecular clock method. -
Table S2.Xlsx
Species Family DNA content Chromosome References (pg/nuclei) number Actinopterygii Ptychobarbus dipogon Cyprinidae ‐ 446 [1] Acipenser baerii Acipenseridae 15.02 437 present study Acipenser mikadoi Acipenseridae 12.9 402 [2*, 3] Acipenser brevirostrum Acipenseridae 13.07 372 [4, 5*] Acipenser baerii Acipenseridae 12.7 368 [6*, 7] Acipenser transmontanus Acipenseridae 9.46 271 [5*, 8] Huso dauricus Acipenseridae 8.3 268 [9*, 10] Acipenser schrenckii Acipenseridae 8.2 266 [9*, 10] Carassius auratus langsdorfii Cyprinidae ‐ 204 [11] Carassius auratus auratus Cyprinidae 5.12 150 [12] Corydoras aeneus Callichthyidae 6.6 134 [13] Myxini Eptatretus burgeri Myxinidae 6.0 36 [14*, 15] Paramyxine atami Myxinidae ‐ 34 [14] Petromyzontida Geotria australis Geotriidae 3.08 180 [16*, 17] Lethenteron reissneri Petromyzontidae ‐ 174 [18] Chondrichthyes Notorynchus cepedianus Notorynchidae 8.8 104 [19] Heterodontus francisci Heterodontidae 17.5 102 [19] Sarcopterygii Protopterus dolloi Protopteridae 163.2 68 [20] Latimeria chalumnae Latimeriidae 7.2 48 [21*, 22] Amphibia Xenopus longipes Pipidae ‐ 108 [23] Xenopus ruwenzoriensis Pipidae 7.95 108 [24*, 25] Reptilia Platemys platycephala Chelidae ‐ 96 [26] Carettochelys insculpta Carettochelyidae ‐ 68 [27] Aves Alcedo atthis Alcedinidae 2.8 138 [28, 29*] Upupa epops Upupidae 2.56 126 [28, 30*] Mammalia Tympanoctomys barrerae Octodontidae 16.8 102 [31, 32*] Ichthyomys pittieri Cricetidae ‐ 92 [33] References 1. Yu XY, Yu XJ. A schizothoracin fish species, Diptychus dipogon, with very high number of chromosomes Chrom Inform Serv. 1990;48:17-8. 2. Zhou H, Fujimoto T, Adachi S, Yamaha E, Arai K. Genome size variation estimated by flow cytometry in Acipenser mikadoi, Huso dauricus in relation to other species of Acipenseriformes. -
Polyphyletic Origin of Ornamental Goldfish
Food and Nutrition Sciences, 2015, 6, 1005-1013 Published Online August 2015 in SciRes. http://www.scirp.org/journal/fns http://dx.doi.org/10.4236/fns.2015.611104 Polyphyletic Origin of Ornamental Goldfish Aleksandr V. Podlesnykh1, Vladimir A. Brykov1,2, Lubov A. Skurikhina1 1Far Eastern Branch of the Russian Academy of Sciences, A. V. Zhirmunsky Institute of Marine Biology, Vladivostok, Russia 2School of Natural Sciences, Far Eastern Federal University, Vladivostok, Russia Email: [email protected] Received 6 May 2015; accepted 17 August 2015; published 20 August 2015 Copyright © 2015 by authors and Scientific Research Publishing Inc. This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/ Abstract Mitochondrial DNA fragment of cytb was compared in all species Carassius auratus complex and three forms of ornamental goldfish. It is shown that the phylogenetic relationships between com- plex species correspond to the existing views, based on mtDNA data and geographical distribution. All forms of ornamental goldfish have a monophyletic origin from Chinese goldfish C. auratus au- ratus. The analysis showed that three nuclear genes (rps7, GH1 and Rh) in the two forms of orna- mental goldfish (Oriental twintail goldfish and Chinese Ranchu) were almost identical C. auratus auratus genes, while all three gene in another more simple form of goldfish (common goldfish) were highly homologous to carp Cyprinus carpio nuclear genes. The obtained data suggested that in the history of aquarium goldfish breeding occurred the stage of distant hybridization between goldfish and common carp. Subsequently, the nuclear genomes of some ornamental forms could be enriched by goldfish genes (a relatively recent form as Oriental twintail goldfish and Chinese Ranchu) or common carp genes (the simplest and most ancient forms like common goldfish) as a result of multidirectional breeding and selection of aquarium goldfish various forms. -
Electrophoretic Studies of Diploid, Triploid, and Tetraploid Forms of the Japanese Silver Crucian Carp, Carassius Auratus Langsdorfii
Japan.J.Ichthyol. 魚 類 学 雑 誌 40(1):65-75,1993 40(1):65-75,1993 Electrophoretic Studies of Diploid, Triploid, and Tetraploid Forms of the Japanese Silver Crucian Carp, Carassius auratus langsdorfii Yasushi Shimizu,1,2 Takashi Oshiro1 and Mitsuru Sakaizumi2,31 Department of Aquatic Biosciences, Tokyo University of Fisheries, 4-5-7 Konan, Minato-ku, Tokyo 108, Japan 2Department of Experimental Animal Science, The Tokyo Metropolitan Institute of Medical Science, 3-18-22 Honkomagome, Bunkyo-ku, Tokyo 113, Japan 3Present address: Department of Biology, College of General Education, Niigata University, 2-8050 Ikarashi, Niigata 950-21, Japan (Received October 29, 1992; in revisedform February 8, 1993; accepted March 22, 1993) Abstract The diploid-polyploid complex in the Japanese silver crucian carp (ginbuna), Carassius auratus langsdorfii, includes a diploid bisexual form, a triploid gynogenetic form and a tetraploid gynogenetic form. However, the origin of the polyploids remains to be clarified. Flow cytometric and electrophoretic analyses of Japanese crucian carp demonstrated that all the individuals with a two-banded pattern for an AMY-2 gene were polyploid, and 90% of the polyploids gave such a two-banded pattern. One of the two bands was not found in diploid subspecies in Japan but was present in both Korean crucian carp and goldfish. The diploid subspecies, kinbuna (C.auratus subsp.), which is distributed along the Pacific coast of eastern Japan, generated a diagnostic band of phosphoglucomutase. This band was also found in the polyploid "ginbuna" from the same region, but was observed in neither triploids nor diploids from other regions. -
Species Composition and Invasion Risks of Alien Ornamental Freshwater
www.nature.com/scientificreports OPEN Species composition and invasion risks of alien ornamental freshwater fshes from pet stores in Klang Valley, Malaysia Abdulwakil Olawale Saba1,2, Ahmad Ismail1, Syaizwan Zahmir Zulkifi1, Muhammad Rasul Abdullah Halim3, Noor Azrizal Abdul Wahid4 & Mohammad Noor Azmai Amal1* The ornamental fsh trade has been considered as one of the most important routes of invasive alien fsh introduction into native freshwater ecosystems. Therefore, the species composition and invasion risks of fsh species from 60 freshwater fsh pet stores in Klang Valley, Malaysia were studied. A checklist of taxa belonging to 18 orders, 53 families, and 251 species of alien fshes was documented. Fish Invasiveness Screening Test (FIST) showed that seven (30.43%), eight (34.78%) and eight (34.78%) species were considered to be high, medium and low invasion risks, respectively. After the calibration of the Fish Invasiveness Screening Kit (FISK) v2 using the Receiver Operating Characteristics, a threshold value of 17 for distinguishing between invasive and non-invasive fshes was identifed. As a result, nine species (39.13%) were of high invasion risk. In this study, we found that non-native fshes dominated (85.66%) the freshwater ornamental trade in Klang Valley, while FISK is a more robust tool in assessing the risk of invasion, and for the most part, its outcome was commensurate with FIST. This study, for the frst time, revealed the number of high-risk ornamental fsh species that give an awareness of possible future invasion if unmonitored in Klang Valley, Malaysia. As a global hobby, fshkeeping is cherished by both young and old people. -
In Vitro Characteristics of Cyprinid Herpesvirus 2: Effect of Kidney Extract Supplementation on Growth
Vol. 115: 223–232, 2015 DISEASES OF AQUATIC ORGANISMS Published August 20 doi: 10.3354/dao02885 Dis Aquat Org In vitro characteristics of cyprinid herpesvirus 2: effect of kidney extract supplementation on growth Tomoya Shibata1, Azusa Nanjo1, Masato Saito1, Keisuke Yoshii1, Takafumi Ito2, Teruyuki Nakanishi3, Takashi Sakamoto1, Motohiko Sano1,* 1Faculty of Marine Science, Tokyo University of Marine Science and Technology, Minato, Tokyo 108-8477, Japan 2Aquatic Animal Health Division, National Research Institute of Aquaculture, Fisheries Research Agency, Tamaki, Mie 519-0423, Japan 3Department of Veterinary Medicine, Nihon University, Fujisawa, Kanagawa 252-0880, Japan ABSTRACT: Herpesviral hematopoietic necrosis caused by goldfish hematopoietic necrosis virus (now identified as cyprinid herpesvirus 2, CyHV-2) has contributed to economic losses in goldfish Carassius auratus culture and is becoming a major obstacle in Prussian carp C. gibelio aquacul- ture in China. Several reports have described difficulties in culturing the virus, with the total loss of infectivity within several passages in cell culture. We succeeded in propagating CyHV-2 with a high infectious titer in a RyuF-2 cell line newly derived from the fin of the Ryukin goldfish variety using culture medium supplemented with 0.2% healthy goldfish kidney extract. The addition of kidney extract to the medium enabled rapid virus growth, resulting in the completion of cyto- pathic effect (CPE) within 4 to 6 d at 25°C. The extract also enabled reproducible virus culture 5−6 −1 with a titer of 10 TCID50 ml . The virus cultured using this protocol showed pathogenicity in goldfish after intraperitoneal injection. The virus grew in RyuF-2 cells at 15, 20, 25, 30, and 32°C but not at 34°C or higher. -
This Article Appeared in a Journal Published by Elsevier. the Attached
This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research and education use, including for instruction at the authors institution and sharing with colleagues. Other uses, including reproduction and distribution, or selling or licensing copies, or posting to personal, institutional or third party websites are prohibited. In most cases authors are permitted to post their version of the article (e.g. in Word or Tex form) to their personal website or institutional repository. Authors requiring further information regarding Elsevier’s archiving and manuscript policies are encouraged to visit: http://www.elsevier.com/authorsrights Author's personal copy Molecular Immunology 70 (2016) 1–7 Contents lists available at ScienceDirect Molecular Immunology j ournal homepage: www.elsevier.com/locate/molimm Functional analysis of membrane-bound complement regulatory protein on T-cell immune response in ginbuna crucian carp a,b a,c a a Indriyani Nur , Nevien K. Abdelkhalek , Shiori Motobe , Ryota Nakamura , a a,∗ a Masakazu Tsujikura , Tomonori Somamoto , Miki Nakao a Laboratory of Marine Biochemistry, Department of Bioscience and Biotechnology, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka 812-8581, Japan b Aquaculture Department, Fisheries and Marine Science Faculty, Halu Oleo University, Kendari 93232, Indonesia c Department of Internal Medicine, Infectious and Fish diseases, Faculty of Veterinary Medicine, El-Mansoura University, Egypt a r t i c l e i n f o a b s t r a c t Article history: Complements have long been considered to be a pivotal component in innate immunity. Recent Received 9 August 2015 researches, however, highlight novel roles of complements in T-cell-mediated adaptive immunity. -
Spontaneous Triploidy in the California Roach Hesperoleucus Symmetricus (Pisces: Cyprinidae)
Cytogcnet. Cell Genet. 17: 144-149 (1976) Spontaneous triploidy in the California roach Hesperoleucus symmetricus (Pisces: Cyprinidae) J.R.G old 1 and J.C. A vise2 'Genetics Section, Texas A&M University, College Station, Tex., and "Department of Zoology, University of Georgia, Athens, Ga. Abstract A single triploid individual (3n = 75) of the California roach,Hesperoleucus symmetricus, was identified among a sample of nine specimens from the Russian River, California. The diploid number ofH. symmetricus, as revealed by the karyotypes of the remaining eight specimens, is 50. Aside from the all-female triploid unisexual fishes, this is the first report of a triploid fish from the wild, and the second report of a triploid in a bisexual fish species. The most likely origin of the triploid was probably fusion of a haploid sperm with an unreduced ovum. Among the vertebrates, viable triploids are exceedingly infrequent in nature, and, with very few exceptions, they have been found only in certain unisexual forms among the fishes(Schultz, 1971) and salamanders (M aslin , 1971). The exceptions include a few isolated individuals of the bird Gallus domesticus(O hno et al., 1963; Sarvei.la , 1970; A bdel - H ameed and Shoefner , 1971), a few species of salamanders and frogs (references in Cuellar and U yeno , 1972), and the fishSalmo gairdneri (C uellar and U yeno , 1972). Triploidy or diploid/triploid chimerism has been reported in other vertebrates, e.g., man, but is associated with embryonic mortality or early death(C hu et al., 1964; C arr , 1970; Schindler and M ikamo , 1970; Bloom , 1972). -
Morphological Identification of Haematopoietic Cells in Pronephros
Volume 60(2):113-118, 2016 Acta Biologica Szegediensis http://www2.sci.u-szeged.hu/ABS ARTICLE Morphological identification of haematopoietic cells in pronephros of common carp (Cyprinus carpio Linnaeus, 1758) Damir Suljeviæ, Erna Islamagić, Andi Alijagić*, Muhamed Fočak, Maja Mitrašinović-Brulić Department of Biology (Biochemistry and Physiology), Faculty of Science, University of Sarajevo, Sarajevo, Bosnia and Herzegovina ABSTRACT Haemopoietic tissue of the common carp pronephros (Cyprinus carpio Linnaeus, KEY WORDS 1758) was studied in regard of morphometric analysis of the erythropoietic, leukopoietic and common carp thrombopoietic cell populations. The aim of this study was to perform evaluation of immature haematopoiesis precursor cells in head kidney of common carp (sampled from Bardaca lake) because there is pronephros no well known data regarding this issue. Microscopic identification of haematopoietic cells cell-lineage included measurement of cell and nuclear size, nuclear-cytoplasmic ratio, determination of the cell area cell and nuclear shape, cytosol coloration and presence of specific granules in the cytosol. The frequency of immature cells and their cell area was also analyzed. Erythroblasts were the most abundant among all observed haemopoietic cell lineages and were the most variable in the size. The largest area was characteristic of monocyte precursors and no significant differences were observed regarding the cell area between prothrombocytes and lymphoblasts, which makes difficult in cell characterization. High number of emerged cells in short time also makes difficult to identify particular stages of maturation in some bloodlines. Rapid maturation of granuloid cells observed within the haemopoietic tissue indicates their functional significance in adaptation to the changeable microenvironment. Acta Biol Szeged 60(2):113-118 (2016) Introduction intestine (Stosik and Deptula 1993). -
Family - Cyprinidae
Family - Cyprinidae One of the largest families of fish. Found in a huge range in temperate and tropical waters of Europe, Africa, Asia, and North America. This family is characterised by no jaw teeth, mouth barbels, no adipose fin. Most closely related to the native families Ariidae and Plotosidae. Various sorts of carp are the best known, but the family also includes minnows, daces, and bitterlings. Four species have established self-maintaing populations in Australia since their introduction in1862. Being small and brightly coloured many species of cyprinids are popular with aquarists, and some valuable economically. Goldfish Carassius auratus Linnaeus (R.M McDowall) Other names: Carp, Crucian carp, Prussian carp. Description: A small, plump, deep-bodied fish, with a large blunt head. Small, toothless protusible mouth and moderately large eyes. Dorsal fin (III-IV, 14- 20); Anal fin small (II-III, 5-7). Tail moderately forked. Pelvic fins 7rays; pectorals with 16-18 rays; many long gill rakers (40-46); vertebrae 27-28. Commonly grows to 100-200 mm, can reach up to 400 mm and 1 kg. Distribution: Possiblly one of the most widespread of the exotic species introduced to Australia. Appears in most freshwater systems in the southern half of Australia, extending from the Fitzroy River in Queensland, throughout New South Wales, Victoria, and South Australia in the inland Murry-Darling system and Cooper Creek, to the south-west of Western Australia. Natural History: Is originally a native to eastern Asia, but now has almost worldwide range. Was imported to Australia in 1876 as an ornamental fish. Alien Fishes | Family Cyprinidae | Page 1 European Carp Cyprinus carpio Linnaeus. -
Hexaploidy in Yellowfish Species (Barbus, Pisces, Cyprinidae) from Southern Africa
Journal of Fish Biology (1990) 37, 105-1 15 Hexaploidy in yellowfish species (Barbus, Pisces, Cyprinidae) from southern Africa L. K. OELLERMANNAND P. H. SICELTON* J.L.B. Smith Institute of Ichthyology, Private Bag 1015, Grahamstown 6140, Republic of South Africa (Received 18 July 1989, Accepted I February 1990) Five small-scaled yellowfish (large Burbus spp.) from southern Africa are shown to have modal 148 or 150chromosomes. Themajority ofcyprinid species have 2N = 50chromosomes, indicating that the yellowfish karyotype is hexaploid in origin. However, as there is no indication that the species are unisexual or that normal reproduction occurs by any means other than bisexual fertilization, the yellowfish karyotype is considered to have reverted to a diploid condition. Key words: karyology; yellowfish; Burbus; hexaploidy; southern Africa. I. INTRODUCTION The name ' yellowfish ' is given to several large-sized Burbus species in southern Africa (Jubb, 1967). The yellowfish fall into two groups on the basis of scale size. The group with smaller scales consists of five recognized species distributed in the Orange River system and adjacent drainage systems (Skelton, 1986). The second group, with larger scales, consists of two species, Barbus rnarequensis Smith, 1841 and Barbus codringtonii Boulenger, 1908, distributed in east coastal drainages from the Phongola River to the Zambezi River system. This study concerns the five small-scaled yellowfish species, viz. Barbus cupensis Smith, 1841 from the Olifants River system, Burbus aeneus (Burchell, 1822) and Burbus kimberleyensis Gilchrist & Thompson, 1913 from the Orange River system, Barbus polylepis Boulenger, 1907 from the Limpopo, lncomati and Phongola River systems, and Burbus natalensis Castelnau, 1861 from the rivers of Natal. -
Black, Grey and Watch Lists of Alien Species in the Czech Republic
A peer-reviewed open-access journal NeoBiota 28: 1–37 (2016)Black, Grey and Watch Lists of alien species in the Czech Republic... 1 doi: 10.3897/neobiota.28.4824 RESEARCH ARTICLE NeoBiota http://neobiota.pensoft.net Advancing research on alien species and biological invasions Black, Grey and Watch Lists of alien species in the Czech Republic based on environmental impacts and management strategy Jan Pergl1, Jiří Sádlo1, Adam Petrusek2, Zdeněk Laštůvka3, Jiří Musil4, Irena Perglová1, Radek Šanda5, Hana Šefrová6, Jan Šíma7, Vladimír Vohralík8, Petr Pyšek1,2 1 Institute of Botany, Department of Invasion Ecology, The Czech Academy of Sciences, CZ-252 43 Průhonice, Czech Republic 2 Department of Ecology, Faculty of Science, Charles University in Prague, Viničná 7, CZ-128 44 Praha 2, Czech Republic 3 Department of Zoology, Fisheries, Hydrobiology and Apidology, Mendel University in Brno, Zemědělská 1, CZ-613 00 Brno, Czech Republic 4 T.G. Masaryk Water Research Institute, Department of Aquatic Ecology, Podbabská 30, CZ-60 00 Prague 6, Czech Republic 5 National Museum, Department of Zoology, Václavské náměstí 68, CZ-115 79 Prague 1, Czech Republic 6 Department of Crop Science, Breeding and Plant Medicine, Mendel University in Brno, Zemědělská 1, CZ-613 00 Brno, Czech Republic 7 Ministry of the Environment of the Czech Republic, Department of Species Protection and Implementation of International Commitments, Vršovická 1442/65, CZ-100 10 Praha 10, Czech Republic 8 Department of Zoology, Faculty of Science, Charles University in Prague, Viničná 7, CZ-128 44 Praha 2, Czech Republic Corresponding author: Jan Pergl ([email protected]) Academic editor: I.