Insect Hormones (19Th Ecdysone) Interna Onal Workshop, 2013
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2012 Annual Report Joseph A
University of New Mexico UNM Digital Repository Annual Reports Museum of Southwestern Biology 9-1-2013 2012 Annual Report Joseph A. Cook Follow this and additional works at: https://digitalrepository.unm.edu/msb_annual_reports Recommended Citation Cook, Joseph A.. "2012 Annual Report." (2013). https://digitalrepository.unm.edu/msb_annual_reports/10 This Annual Report is brought to you for free and open access by the Museum of Southwestern Biology at UNM Digital Repository. It has been accepted for inclusion in Annual Reports by an authorized administrator of UNM Digital Repository. For more information, please contact [email protected]. MUSEUM OF SOUTHWESTERN BIOLOGY ACADEMIC YEAR 2012-2013 ANNUAL REPORT JOSEPH A. COOK, DIRECTOR The Museum of Southwestern Biology (MSB) continues to be a vital contributor to educational initiatives at UNM. Numerous undergraduate projects, graduate theses & dissertations (42 graduate students, 9 completed in this period), or projects in Biology, Anthropology, Art, and elsewhere use MSB specimens as a basis for their studies. Many undergraduate students associated with MSB (76 in this period) continue on to graduate programs, professional schools or obtain jobs in conservation and management agencies in state, federal, or private sector positions. Each division immerses students in natural history, systematics, molecular biology, morphology, species identification, museum specimen preparation and curation, field studies, and web-based informatics. MSB continues to lead in training under-represented students or international students, especially those from Latin America. Indeed, MSB has been the locus of large student-training efforts for many years and sponsors two museum- centered programs (funded by the National Science Foundation) that focus on student success: Undergraduate Opportunities (UnO- $1,010,000) and Aim-up! ($495,000). -
Metabarcoding Soil Microarthropods for Soil Quality Assessment: Importance of Integrated Taxonomy, Phylogenetic Marker Selection and Sampling Design
Metabarcoding soil microarthropods for soil quality assessment: Importance of integrated taxonomy, phylogenetic marker selection and sampling design by Jesse Frank James Hoage A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science (MSc) in Biology The Faculty of Graduate Studies Laurentian University Sudbury, Ontario, Canada © Jesse Frank James Hoage, 2018 ii THESIS DEFENCE COMMITTEE/COMITÉ DE SOUTENANCE DE THÈSE Laurentian Université/Université Laurentienne Faculty of Graduate Studies/Faculté des études supérieures Title of Thesis Titre de la thèse Metabarcoding soil microarthropods for soil quality assessment: Importance of integrated taxonomy, phylogenetic marker selection and sampling design Name of Candidate Nom du candidat Hoage, Jesse Degree Diplôme Master of Science Department/Program Date of Defence Département/Programme Biology Date de la soutenance September 10, 2018 APPROVED/APPROUVÉ Thesis Examiners/Examinateurs de thèse: Dr. Nathan Basiliko (Co-Supervisor/Co-directeur de thèse) Dr. Lisa Venier (Co-Supervisor/Co-directrice de thèse) Dr. Nadia Mykytczuk (Committee member/Membre du comité) Dr. Yves Alarie (Committee member/Membre du comité) Approved for the Faculty of Graduate Studies Approuvé pour la Faculté des études supérieures Dr. David Lesbarrères Monsieur David Lesbarrères Dr. Pedro Antunes Dean, Faculty of Graduate Studies (External Examiner/Examinateur externe) Doyen, Faculté des études supérieures ACCESSIBILITY CLAUSE AND PERMISSION TO USE I, Jesse Hoage, hereby grant to Laurentian University and/or its agents the non-exclusive license to archive and make accessible my thesis, dissertation, or project report in whole or in part in all forms of media, now or for the duration of my copyright ownership. I retain all other ownership rights to the copyright of the thesis, dissertation or project report. -
Patterns of Animal Dispersal, Vicariance and Diversification in the Holarctic
Biological Journal of the Linnean Society (2001), 73: 345-390. With 15 figures doi:10.1006/bij1.2001.0542, available online at http;//www.idealibrary.comon IDE bl 0 c Patterns of animal dispersal, vicariance and diversification in the Holarctic ISABEL SANMARTIN1*, HENRIK ENGHOFF' and FREDRIK RONQUISTl 'Department of Systematic Zoology, Evolutionary Biology Centre, Uppsala University, Norbyvugen 180, SE-752 36 Uppsala, Sweden 2Zoologisk Museum, Uniuersitetsparken 15, DK-2100 Copenhagen, Denmark Received 23 October 2000; accepted for publication 25 March 2001 We analysed patterns of animal dispersal, vicariance and diversification in the Holarctic based on complete phylogenies of 57 extant non-marine taxa, together comprising 770 species, documenting biogeographic events from the Late Mesozoic to the present. Four major areas, each corresponding to a historically persistent landmass, were used in the analyses: eastern Nearctic (EN), western Nearctic (WN), eastern Palaeoarctic (EP) and western Palaeoarctic (WP). Parsimony-based tree fitting showed that there is no significantly supported general area cladogram for the dataset. Yet, distributions are strongly phylogenetically conserved, as revealed by dispersal- vicariance analysis (DIVA). DIVA-based permutation tests were used to pinpoint phylogenetically determined biogeographic patterns. Consistent with expectations, continental dispersals (WP-EP and WN-EN) are sig- nificantly more common than palaeocontinental dispersals (WN-EP and EN-WP), which in turn are more common than disjunct dispersals (EN-EP and WN-WP). There is significant dispersal asymmetry both within the Nearctic (WN+EN more common than EN+WN) and the Palaeoarctic (EP+WP more common than WP-tEP). Cross- Beringian faunal connections have traditionally been emphasized but are not more important than cross-Atlantic connections in our data set. -
Neotropical Microlepidoptera, XXI: New Genera and Species of Oecophoridae from Chile
Neotropical Microlepidoptera, XXI: New Genera and Species of Oecophoridae from Chile J. F. GATES CLARKE SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 273 SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of "diffusing knowledge" was expressed by the first Secretary of the Smithsonian. In his formal plan for the Institution, Joseph Henry outlined a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to the Marine Sciences Smithsonian Contributions to Paleobiotogy Smithsonian Contributions to Zoology Smithsonian Studies in Air and Space Smithsonian Studies in History and Technology In these series, the Institution publishes small papers and full-scale monographs that report the research and collections of its various museums and bureaux or of professional colleagues in the world cf science and scholarship. The publications are distributed by mailing lists to libraries, universities, and similar institutions throughout the world. Papers or monographs submitted for series publication are received by the Smithsonian Institution Press, subject to its own review for format and style, only through departments of the various Smithsonian museums or bureaux, where the manuscripts are given substantive review. -
Rapid and Accurate Taxonomic Classification of Insect (Class Insecta
Molecular Ecology Resources (2014) doi: 10.1111/1755-0998.12240 Rapid and accurate taxonomic classification of insect (class Insecta) cytochrome c oxidase subunit 1 (COI) DNA barcode sequences using a na€ıve Bayesian classifier TERESITA M. PORTER,* JOEL F. GIBSON,† SHADI SHOKRALLA,† DONALD J. BAIRD,‡ G. BRIAN GOLDING* andMEHRDAD HAJIBABAEI† *McMaster University, Department of Biology, 1280 Main Street West, Hamilton, ON, Canada L8S 4K1, †Biodiversity Institute of Ontario & Department of Integrative Biology, University of Guelph, 50 Stone Road East, Guelph, ON, Canada N1G 2W1, ‡Environment Canada at Canadian Rivers Institute, Department of Biology, University of New Brunswick, Fredericton, NB, Canada E3B 6E1 Abstract Current methods to identify unknown insect (class Insecta) cytochrome c oxidase (COI barcode) sequences often rely on thresholds of distances that can be difficult to define, sequence similarity cut-offs, or monophyly. Some of the most commonly used metagenomic classification methods do not provide a measure of confidence for the taxonomic assignments they provide. The aim of this study was to use a na€ıve Bayesian classifier (Wang et al. Applied and Envi- ronmental Microbiology, 2007; 73: 5261) to automate taxonomic assignments for large batches of insect COI sequences such as data obtained from high-throughput environmental sequencing. This method provides rank-flexible taxo- nomic assignments with an associated bootstrap support value, and it is faster than the BLAST-based methods com- monly used in environmental sequence surveys. We have developed and rigorously tested the performance of three different training sets using leave-one-out cross-validation, two field data sets, and targeted testing of Lepidoptera, Diptera and Mantodea sequences obtained from the Barcode of Life Data system. -
Lepidoptera: Oecophoridae)
Research Article Biodiversity and Natural History (2016) 2(1): 46-49 Redescripción y registros geográficos de Teresita diffinis (Felder & Rogenhofer) (Lepidoptera: Oecophoridae) A redescription and geographical records of Teresita diffinis (Felder & Rogenhofer) (Lepidoptera: Oecophoridae) Francisco Urra Museo Nacional de Historia Natural, casilla 787, Santiago, Chile. *E-mail: [email protected] Resumen Se actualiza la descripción morfológica de Teresita diffinis (Felder & Rogenhofer). Se entregan fotografías del adulto y de las estructuras genitales, la venación alar, y antecedentes de la distribución geográfica de esta especie. Palabras clave: Colchagua, Curicó, microlepidópteros, Oecophorinae, Olmué, taxonomía, Teresita isaura. Abstract The morphological description of Teresita diffinis (Felder & Rogenhofer) is updated. Photographs of adult and genital structures, wing venation, and geographic distribution data for this species are given. Key words: Colchagua, Curicó, Microlepidoptera, Oecophorinae, Olmué, taxonomy, Teresita isaura. INTRODUCCIÓN subtriangular, más larga que ancha, sacculus sin procesos; aedeagus curvo, extremo distal agudo, extremo proximal se El género Teresita Clarke, incluye dos especies conocidas, T. proyecta ventralmente, vesica con finas espículas en isaura Clarke, 1978 y T. diffinis (Felder & Rogenhofer, 1875). extremo distal. La genitalia de la hembra de la especie tipo T. isaura, la especie tipo del género, fue descrita a partir de se desconoce. un único ejemplar macho, recolectado en la localidad de Río En este trabajo se entrega una descripción actualizada de Blanco, Malleco, IX Región de la Araucanía. En tanto T. Teresita diffinis, se ilustran por primera vez las estructuras diffinis, fue asignada originalmente al género Cryptolechia genitales del macho y la hembra, y se proveen registros de por Felder & Rogenhofer (1875), quienes sólo presentan la su distribución geográfica. -
Evolution and Classification of Bibionidae (Diptera: Bibionomorpha)
AN ABSTRACT OF THE DISSERTATION OF Scott J. Fitzgerald for the degree of Doctor of Philosophy in Entomology presented on 3 June, 2004. Title: Evolution and Classification of Bibionidae (Diptera: Bibionomorpha). Abstract approved: Signature redacted forprivacy. p 1ff Darlene D. Judd The family Bibionidae has a worldwide distribution and includes approximately 700 species in eight extant genera. Recent studies have not produced compelling evidence supporting Bibionidae as a monophyletic group or identified the sister group to bibionids. Therefore, the purpose of this study is to examine the classification and evolution of the family Bibionidae in a cladistic framework. The study has four primary objectives: 1) test the monophyly of the family; 2) determine the sister group of Bibionidae; 3) examine generic and subfamilial relationships within the family; and 4) provide a taxonomic revision of the extant and fossil genera of Bibionidae. Cladistic methodology was employed and 212 morphological characters were developed from all life stages (adult, pupa, larva, and egg). Characters were coded as binary or multistate and considered equally weighted and unordered. A heuristic search with a multiple random taxon addition sequence was used and Bremer support values are provided to show relative branch support. A strict consensus of 43 equal-length trees of 1,106 steps indicates that the family Bibionidae is monophyletic and is sister group to Pachyneuridae. All bibionid genera are supported as monophyletic except for Bibio and Bibiodes (monophyly of the latter genus was not examined because only one exemplar was included). Results indicate that the subfamilies Hesperininae and Bibioninae are monophyletic and Pleciinae is paraphyletic. -
Diptera Families MS FINAL
The Diptera Families of British Columbia The Diptera Families of British Columbia G.G.E. Scudder and R.A. Cannings March 31, 2006 G.G.E. Scudder and R.A. Cannings Printed 04/25/06 Coleoptera Families of British Columbia Table of Contents Introduction......................................................................................................................................1 Order Diptera Description................................................................................................................3 Keys to Order Diptera and Families.................................................................................................6 Family Descriptions .......................................................................................................................26 Suborder NEMATOCERA............................................................................................................26 Infraorder TIPULOMORPHA .......................................................................................................26 Family TANYDERIDAE (Primitive Crane Flies) [Fig. 1]............................................................26 Family TIPULIDAE (Crane Flies) [Fig. 2]....................................................................................26 Infraorder BLEPHARICEROMORPHA .......................................................................................27 Family BLEPHARICERIDAE (Net-winged Midges) [Fig. 3]......................................................27 Family DEUTEROPHLEBIIDAE (Mountain -
Pachyneura Fasciata Zetterstedt, 1838 (Diptera, Pachyneuridae) DNA Barcoded from the Northernmost Forests of the World
© Norwegian Journal of Entomology. 20 December 2019 Pachyneura fasciata Zetterstedt, 1838 (Diptera, Pachyneuridae) DNA barcoded from the northernmost forests of the world JOSTEIN KJÆRANDSEN Kjærandsen, J. 2019. Pachyneura fasciata Zetterstedt, 1838 (Diptera, Pachyneuridae) DNA barcoded from the northernmost forests of the world. Norwegian Journal of Entomology 66, 77–80. New records of Pachyneura fasciata Zetterstedt, 1838 are presented from Harrelv Nature Reserve at Varanger Peninsula, Norway, where a lush riverine ravine dominated by grey alder (Alnus incana) forms one of the worlds´ northernmost patches of forests. This expands the known distribution of Pachyneura fasciata far north of the Taiga belt with continuous natural spruce forest, previously assumed to demark its northern distribution limit in Fennoscandia. Fresh specimens were successfully DNA barcoded and compared with a few other records of the species available on The Barcode of Life Data System (BOLD), including a record from Primorskiy Krai in far east Russia, which is genetically separated from the European population by a distance of 2.09%. Key words: Diptera, Pachyneuridae, Pachyneura, Norway, new records, new distribution, biology, DNA barcoding. Jostein Kjærandsen, Tromsø University Museum, UiT - The Arctic University of Norway, P.O. Box 6050 Langnes, NO-9037 Tromsø. E-mail: [email protected] Introduction in Finland and at the Kola Peninsula of Russia. Paramonov & Salmela (2016) further reviewed The family Pachyneuridae (including Cramptono- the various habitats the species inhabits, and myiinae) was regarded as sister-group to the noted that the northern limit appears to follow the families Bibionidae and Hesperinidae combined distribution limit of continuous spruce forests in by Ševčík et al. -
Oecophoridae (Lepidoptera: Gelechioidea)
Boletín Nahuelbuta Natural (Abril 2020) 5: 1 Artículo de Investigación Lepidópteros de la Cordillera de Nahuelbuta, parte I: Oecophoridae (Lepidoptera: Gelechioidea) Lepidoptera of the Nahuelbuta Range, part I: Oecophoridae (Lepidoptera: Gelechioidea) Francisco Urra1,2, Jorge Pérez-Schultheiss3, Alexander Otárola4 & Sebastián Araneda1 1Área de de Entomología, Museo Nacional de Historia Natural de Chile, Casilla 787, Correo Central, Santiago, Chile 2PPG Biologia Animal, Departamento de Zoologia, Instituto de Biociências, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9500, Porto Alegre, RS, 91501-970, Brazil 3Área de Zoología de Invertebrados, Museo Nacional de Historia Natural de Chile, Casilla 787, Correo Central, Santiago, Chile 4Área de Educación, Museo Nacional de Historia Natural de Chile, Casilla 787, Santiago, Chile Resumen Se entrega un listado de especies de la familia Oecophoridae, recolectadas en la cordillera de Nahuelbuta, durante tres expediciones efectuadas entre los años 2016 y 2019. Se documenta la presencia de 27 especies, pertenecientes a 20 géneros conocidos. De estas especies, 11 corresponderían a especies endémicas de la zona, mientras que otras 15 especies se registran por primera vez para la cordillera de Nahuelbuta. Palabras claves: Lepidopterofauna, microlepidópteros, polillas, trampa de luz. Abstract A list of species of the Oecophoridae family, collected in the Nahuelbuta mountain range, during three expeditions between 2016 and 2019, is provided. The presence of 27 species, belonging to 20 -
1. "Dalaca" Species of Authors That Are Not Placed Un- Der Dalaca Walker
NOTES 1. "Dalaca" species of authors that are not placed un ies have been examined by the author for assign der Dalaca Walker, 1856, belong to other genera ment to subfamily. [po 271 presently undefined, or the species need further 17. Exaeretia Stainton, 1849, is considered by the au study. [po 17] thor to be the senior synonym of Depressariodes 2. This is the first time Palaeosetidae have been re Turati, 1924, and Martyrhilda Clarke, 1941, but presented in the Neotropical fauna (Nielsen and some authors restrict Exaeretia to a few Palearc Robinson, 1983). [po 17] tic species only. [po 27] 3. Nepticulinae is used in place of Stigmellinae, as 18. Oecophoridae genera described by Clarke (1978) proposed by ScobIe (1983), due to the need for nom were not assigned to subfamilies by Clarke. They inate subordinate taxa (ICZN Art. 37). [po 17] are placed in the checklist according to their appa 4. Nepticulini is used, as in footnote 3, in place of rently valid subfamily and tribal assignments but in Stigmellini, as proposed by ScobIe (1983) (ICZN Art. alphabetical order under each higher category. [po 37). [po 17] 271 5. Prodoxoides is included, although described in 1984, 19. Eumimographe Dognin, 1905, is considered a sepa due to the significance of including the first dis rate genus by some researchers. [po 281 covery of Prodoxidae from temperate South Ameri 20. Atterialydia Druce was transferred from Tortrici ca. [po 18] dae to Oecophoridae by Obraztsov (1966. Proc. US 6. Tineidae genera are listed alphabetically pending a NM., 118:620). The species is herein assigned to the generic revision, since the author considers the pre Eumimographe group of species,now in Hypercallia. -
Zootaxa, Lepidoptera, Gelechioidea
ZOOTAXA 510 Catalog of the type specimens of Gelechioidea (Lepidoptera) in the collection of the National Museum of Natural History, Smithsonian Institution, Washington, DC JOHN W. BROWN, DAVID ADAMSKI, RONALD W. HODGES & STEPHEN M. BAHR, II Magnolia Press Auckland, New Zealand JOHN W. BROWN, DAVID ADAMSKI, RONALD W. HODGES & STEPHEN M. BAHR, II Catalog of the type specimens of Gelechioidea (Lepidoptera) in the collection of the National Museum of Natural History, Smithsonian Institution, Washington, DC (Zootaxa 510) 160 pp.; 30 cm. 14 May 2004 ISBN 1-877354-40-6 (Paperback) ISBN 1-877354-41-4 (Online edition) FIRST PUBLISHED IN 2004 BY Magnolia Press P.O. Box 41383 Auckland 1030 New Zealand e-mail: [email protected] http://www.mapress.com/zootaxa/ © 2004 Magnolia Press All rights reserved. No part of this publication may be reproduced, stored, transmitted or disseminated, in any form, or by any means, without prior written permission from the publisher, to whom all requests to re- produce copyright material should be directed in writing. This authorization does not extend to any other kind of copying, by any means, in any form, and for any purpose other than private research use. ISSN 1175-5326 (Print edition) ISSN 1175-5334 (Online edition) Zootaxa 510: 1–160 (2004) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA 510 Copyright © 2004 Magnolia Press ISSN 1175-5334 (online edition) Catalog of the type specimens of Gelechioidea (Lepidoptera) in the collection of the National Museum of Natural History, Smithsonian Institution, Washington, DC JOHN W. BROWN, DAVID ADAMSKI, RONALD W. HODGES & STEPHEN M.