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Supp Tables.Pdf Supplemental Table 1 Inflammation KEGG ID Title Gene Count KEGG:mmu04662 B cell receptor signaling pathway 20 KEGG:mmu04060 Cytokine-cytokine receptor interaction 44 KEGG:mmu04010 MAPK signaling pathway 55 KEGG:mmu04650 Natural killer cell mediated cytotoxicity 30 KEGG:mmu04620 Toll-like receptor signaling pathway 36 133 unique genes Gene IDs locus description expression KO/WT 109689 Arrb1 arrestin, beta 1 0.741 216869 Arrb2 arrestin, beta 2 0.681 11911 Atf4 activating transcription factor 4 0.118 12042 Bcl10 B-cell leukemia/lymphoma 10 0.625 12122 Bid BH3 interacting domain death agonist 0.743 12370 Casp8 caspase 8 1.378 20296 Ccl2 chemokine (C-C motif) ligand 2 60.632 20301 Ccl27a chemokine (C-C motif) ligand 27A 0.676 20302 Ccl3 chemokine (C-C motif) ligand 3 2.549 20303 Ccl4 chemokine (C-C motif) ligand 4 2.4 20304 Ccl5 chemokine (C-C motif) ligand 5 0.405 20305 Ccl6 chemokine (C-C motif) ligand 6 5.443 20306 Ccl7 chemokine (C-C motif) ligand 7 101.398 20307 Ccl8 chemokine (C-C motif) ligand 8 24.988 20308 Ccl9 chemokine (C-C motif) ligand 9 1.361 12774 Ccr5 chemokine (C-C motif) receptor 5 6.792 21939 Cd40 CD40 antigen 0.6845 12506 Cd48 CD48 antigen 0.523 12517 Cd72 CD72 antigen 0.326 12524 Cd86 CD86 antigen 3 12977 Csf1 colony stimulating factor 1 (macrophage) 6.425 12978 Csf1r colony stimulating factor 1 receptor 0.492 12983 Csf2rb colony stimulating factor 2 receptor, beta, 0.607 13051 Cx3cr1 chemokine (C-X3-C) receptor 1 0.568 14825 Cxcl1 chemokine (C-X-C motif) ligand 1 1.479 15945 Cxcl10 chemokine (C(C-X-C-X-C motif) ligand 10 0.6620.662 20310 Cxcl2 chemokine (C-X-C motif) ligand 2 1.39 17329 Cxcl9 chemokine (C-X-C motif) ligand 9 0.604 13163 Daxx Fas death domain-associated protein 0.647 13198 Ddit3 DNA-damage inducible transcript 3 1.593 19252 Dusp1 dual specificity phosphatase 1 0.422 70686 Dusp16 dual specificity phosphatase 16 1.262 319520 Dusp4 dual specificity phosphatase 4 0.689 67603 Dusp6 dual specificity phosphatase 6 1.924 14127 Fcer1g Fc receptor, IgE, high affinity I, gamma po0.002 14130 Fcgr2b Fc receptor, IgG, low affinity IIb 1.78 14131 Fcgr3 Fc receptor, IgG, low affinity III 4.466 192176 Flna filamin, alpha 0.694 286940 Flnb filamin, beta 0.7445 14281 Fos FBJ osteosarcoma oncogene 0.673 17873 Gadd45b growth arrest and DNA-damage-inducible0.701 23882 Gadd45g growth arrest and DNA-damage-inducible0.566 14964 H2-D1 histocompatibility 2, D region locus 1 0.702 15040 H2-T23 histocompatibility 2, T region locus 23 1.358 23900 Hcst hematopoietic cell signal transducer 0.737 15896 Icam2 intercellular adhesion molecule 2 0.626 15979 Ifngr1 interferon gamma receptor 1 0.387 56489 Ikbke inhibitor of kappaB kinase epsilon 0.504 16154 Il10ra interleukin 10 receptor, alpha 0.236 16157 Il11ra1 interleukin 11 receptor, alpha chain 1 1.346 16173 Il18 interleukin 18 1.329 16175 Il1a interleukin 1 alpha 5.595 16176 Il1b interleukin 1 beta 4.626 16188 Il3ra interleukin 3 receptor, alpha chain 0.574 16194 Il6ra interleukin 6 receptor, alpha 0.695 16197 Il7r interleukin 7 receptor 1.409 16323 Inhba inhibin beta-A 8.497 16331 Inpp5d inositol polyphosphate-5-phosphatase D 0.617 16179 Irak1 interleukin-1 receptor-associated kinase 10.738 266632 Irak4 interleukin-1 receptor-associated kinase 40.708 54131 Irf3 interferon regulatory factor 3 0.714 27056 Irf5 interferon regulatory factor 5 0.397 54123 Irf7 interferon regulatory factor 7 1.75 16590 Kit kit oncogene 0.475 16634 Klra3 killer cell lectin-like receptor, subfamily A, 0.573 16653 Kras v-Ki-ras2 Kirsten rat sarcoma viral oncoge2.362 240354 Malt1 mucosa associated lymphoid tissue lymph1.51 23938 Map2k5 mitogen-activated protein kinase kinase 50.733 26401 Map3k1 mitogen-activated protein kinase kinase k 0.755 53859 Map3k14 mitogen-activated protein kinase kinase k 0.512 53608 Map3k6 mitogen-activated protein kinase kinase k 0.605 26410 Map3k8 mitogen-activated protein kinase kinase k 0.471 26412 Map4k2 mitogen-activated protein kinase kinase k 0.71 225028 Map4k3 mitogen-activated protein kinase kinase k 0.643 26413 Mapk1 mitogen-activated protein kinase 1 0.719 26416 Mapk14 mitogen-activated protein kinase 14 0.407 26417 Mapk3 mitogen-activated protein kinase 3 0.658 26419 Mapk8 mitogen-activated protein kinase 8 1.423 26420 Mapk9 mitogen-activated protein kinase 9 0.751 17164 Mapkapk2 MAP kinase-activated protein kinase 2 0.518 102626 Mapkapk3 mitogen-activated protein kinase-activated0.606 17260 Mef2c myocyte enhancer factor 2C 1.394 17347 Mknk2 MAP kinase-interacting serine/threonine k0.639 18018 Nfatc1 nuclear factor of activated T-cells, cytopla0.672 18035 Nfkbia nuclear factor of kappa light polypeptide g0.709 18413 Osm oncostatin M 3.691 18479 Pak1 p21 protein (Cdc42/Rac)-activated kinase0.647 18590 Pdgfa platelet derived growth factor, alpha 1.868 54635 Pdgfc platelet-derived growth factor, C polypept 2.225 18707 Pik3cd phosphatidylinositol 3-kinase catalytic del 0.719 30955 Pik3cg phosphoinositide-3-kinase, catalytic, gam 0.712 18709 Pik3r2 phosphatidylinositol 3-kinase, regulatory s0.703 234779 Plcg2 phospholipase C, gamma 2 0.75 19043 Ppm1b protein phosphatase 1B, magnesium depe1.374 19055 Ppp3ca protein phosphatase 3, catalytic subunit, a0.694 19056 Ppp3cb protein phosphatase 3, catalytic subunit, b0.762 19058 Ppp3r1pp proteinpp phosphatasep 3, regulatory subunit1.689 18751 Prkcb protein kinase C, beta 0.348 19229 Ptk2b PTK2 protein tyrosine kinase 2 beta 0.571 15170 Ptpn6 protein tyrosine phosphatase, non-recepto0.518 320139 Ptpn7 protein tyrosine phosphatase, non-recepto1.496 19353 Rac1 RAS-related C3 botulinum substrate 1 0.698 19369 Raet1b retinoic acid early transcript beta 1.412 19370 Raet1c retinoic acid early transcript gamma 2.977 110157 Raf1 v-raf-leukemia viral oncogene 1 0.47 19419 Rasgrp1 RAS guanyl releasing protein 1 0.532 240168 Rasgrp3 RAS, guanyl releasing protein 3 1.418 233046 Rasgrp4 RAS guanyl releasing protein 4 0.567 19697 Rela v-rel reticuloendotheliosis viral oncogene 0.728 19766 Ripk1 receptor (TNFRSF)-interacting serine-thre0.741 20111 Rps6ka1 ribosomal protein S6 kinase polypeptide 10.505 73086 Rps6ka5 ribosomal protein S6 kinase, polypeptide 0.611 20130 Rras Harvey rat sarcoma oncogene, subgroup 0.601 26904 Sh2d1b1 SH2 domain protein 1B1 0.575 20750 Spp1 secreted phosphoprotein 1 1.337 20846 Stat1 signal transducer and activator of transcri 0.689 16765 Stmn1 stathmin 1 1.473 68652 Tab2 TGF-beta activated kinase 1/MAP3K7 bin0.752 21803 Tgfb1 transforming growth factor, beta 1 0.71 21812 Tgfbr1 transforming growth factor, beta receptor 0.765 21813 Tgfbr2 transforming growth factor, beta receptor 1.773 106759 Ticam1 toll-like receptor adaptor molecule 1 0.697 225471 Ticam2 toll-like receptor adaptor molecule 2 0.739 21899 Tlr6 toll-like receptor 6 0.695 170744 Tlr8 toll-like receptor 8 0.731 18383 Tnfrsf11b tumor necrosis factor receptor superfamily4.188 27279 Tnfrsf12a tumor necrosis factor receptor superfamily1.455 21937 Tnfrsf1a tumor necrosis factor receptor superfamily0.71 21938 Tnfrsf1b tumor necrosis factor receptor superfamily0.441 94185 Tnfrsf21 tumor necrosis factor receptor superfamily0.722 24099 Tnfsf13b tumor necrosis factor (ligand) superfamily 1.84 50930 Tnfsf14 tumor necrosis factor (ligand) superfamily 2.022 22339 Vegfa vascular endothelial growth factor A 0.698 Differentiation Apoptosis Cancer KEGG ID Title Gene Count KEGG:mmu04115 p53 signaling 18 KEGG:mmu04210 Apoptosis 28 KEGG:mmu04110 Cell cycle 29 KEGG:mmu05220 Chronic myeloid leukemia 20 KEGG:mmu05210 Colorectal cancer 21 KEGG:mmu05212 Pancreatic cancer 23 KEGG:mmu05211 Renal cell carcinoma 19 92 unique genes Gene IDs locus description expression KO/WT 72993 Appl1 adaptor protein, phosphotyrosine interacti1.329 11863 Arnt aryl hydrocarbon receptor nuclear transloc0.757 11920 Atm ataxia telangiectasia mutated homolog (h 0.605 12015 Bad BCL2-associated agonist of cell death 0.748 170770 Bbc3 BCL2 binding component 3 0.623 12043 Bcl2 B-cell leukemia/lymphoma 2 1.406 12048 Bcl2l1 BCL2-like 1 1.56 12122 Bid BH3 interacting domain death agonist 0.743 11797 Birc2 baculoviral IAP repeat-containing 2 0.65 11799 Birc5 baculoviral IAP repeat-containing 5 1.313 12368 Casp6 caspase 6 0.587 12370 Casp8 caspase 8 1.378 268697 Ccnb1 cyclin B1 1.575 12443 Ccnd1 cyclin D1 2.234 12452 Ccng2 cyclin G2 0.451 12521 Cd82 CD82 antigen 0.635 52563 Cdc23 CDC23 (cell division cycle 23, yeast, hom1.551 12544 Cdc45l cell division cycle 45 homolog (S. cerevisi1.429 23834 Cdc6 cell division cycle 6 homolog (S. cerevisia1.811 12545 Cdc7 cell division cycle 7 (S. cerevisiae) 1.511 12534 Cdk1 cyclincyclin-dependent-dependent kinase 1 1.451.45 12575 Cdkn1a cyclin-dependent kinase inhibitor 1A (P210.681 12577 Cdkn1c cyclin-dependent kinase inhibitor 1C (P570.295 12579 Cdkn2b cyclin-dependent kinase inhibitor 2B (p15 0.402 12983 Csf2rb colony stimulating factor 2 receptor, beta, 0.607 13555 E2f1 E2F transcription factor 1 1.688 242705 E2f2 E2F transcription factor 2 0.425 112407 Egln3 EGL nine homolog 3 (C. elegans) 0.497 13663 Ei24 etoposide induced 2.4 mRNA 0.735 23871 Ets1 E26 avian leukemia oncogene 1, 5 domai 0.519 14194 Fh1 fumarate hydratase 1 1.343 14281 Fos FBJ osteosarcoma oncogene 0.673 14367 Fzd5 frizzled homolog 5 (Drosophila) 1.451 56371 Fzr1 fizzy/cell division cycle 20 related 1 (Droso0.72 14388 Gab1 growth factor receptor bound protein 2-as 3.013 17873 Gadd45b growth arrest and DNA-damage-inducible0.701 23882 Gadd45g growth arrest and DNA-damage-inducible0.566 29870 Gtse1 G two S phase expressed protein 1 1.325 16175 Il1a interleukin 1 alpha 5.595 16176 Il1b interleukin
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