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Phyre 2 Results for Q2FV59

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Phyre 2 Results for Q2FV59 Email [email protected] Description Q2FV59 Tue Jul 17 17:05:54 BST Date 2012 Unique Job 2b2080859139b16d ID Detailed template information # Template Alignment Coverage 3D Model Confidence % i.d. Template Information PDB header:transferase Chain: A: PDB Molecule:dehydrosqualene synthase; 1 c2zcpA_ Alignment 100.0 99 PDBTitle: crystal structure of the c(30) carotenoid dehydrosqualene2 synthase from staphylococcus aureus complexed with3 farnesyl thiopyrophosphate Fold:Terpenoid synthases 2 d1ezfa_ Alignment 100.0 18 Superfamily:Terpenoid synthases Family:Squalene synthase PDB header:transferase Chain: G: PDB Molecule:geranyl diphosphate synthase; 3 c3aq0G_ Alignment 98.4 15 PDBTitle: ligand-bound form of arabidopsis medium/long-chain length prenyl2 pyrophosphate synthase (surface polar residue mutant) Fold:Terpenoid synthases 4 d2q80a1 Alignment 98.0 12 Superfamily:Terpenoid synthases Family:Isoprenyl diphosphate synthases PDB header:transferase Chain: A: PDB Molecule:polyprenyl synthetase; 5 c4dhdA_ 97.9 13 Alignment PDBTitle: crystal structure of isoprenoid synthase a3msh1 (target efi-501992)2 from pyrobaculum calidifontis PDB header:transferase Chain: A: PDB Molecule:geranylgeranyl pyrophosphate 6 c1wy0A_ Alignment 97.9 13 synthetase; PDBTitle: crystal structure of geranylgeranyl pyrophosphate synthetase from2 pyrococcus horikoshii ot3 Fold:Terpenoid synthases 7 d1v4ea_ Alignment 97.8 15 Superfamily:Terpenoid synthases Family:Isoprenyl diphosphate synthases PDB header:transferase Chain: D: PDB Molecule:farnesyl-diphosphate synthase; 8 c3m9uD_ 97.7 10 Alignment PDBTitle: crystal structure of geranylgeranyl pyrophosphate synthase2 from lactobacillus brevis atcc 367 PDB header:transferase Chain: B: PDB Molecule:decaprenyl diphosphate synthase; 9 c3mzvB_ 97.7 11 Alignment PDBTitle: crystal structure of a decaprenyl diphosphate synthase from2 rhodobacter capsulatus PDB header:transferase Chain: B: PDB Molecule:geranylgeranyl pyrophosphate synthase; 10 c3n3dB_ 97.6 13 Alignment PDBTitle: crystal structure of geranylgeranyl pyrophosphate synthase from2 lactobacillus brevis atcc 367 PDB header:transferase Chain: B: PDB Molecule:trans-isoprenyl diphosphate synthase; 11 c3oyrB_ Alignment 97.4 11 PDBTitle: crystal structure of polyprenyl synthase from caulobacter crescentus2 cb15 complexed with calcium and isoprenyl diphosphate PDB header:transferase Chain: A: PDB Molecule:putative polyprenyl synthetase; 12 c3nf2A_ 97.3 14 Alignment PDBTitle: crystal structure of polyprenyl synthetase from streptomyces2 coelicolor a3(2) PDB header:transferase Chain: B: PDB Molecule:octaprenyl-diphosphate synthase; 13 c3rmgB_ 97.2 10 Alignment PDBTitle: crystal structure of geranylgeranyl pyrophosphate synthase from2 bacteroides thetaiotaomicron PDB header:transferase Chain: D: PDB Molecule:component b of hexaprenyl diphosphate 14 c3aqbD_ Alignment 97.1 15 synthase; PDBTitle: m. luteus b-p 26 heterodimeric hexaprenyl diphosphate synthase in2 complex with magnesium PDB header:transferase Chain: B: PDB Molecule:geranylgeranyl pyrophosphate 15 c2e8xB_ Alignment 97.0 16 synthetase; PDBTitle: s. cerevisiae geranylgeranyl pyrophosphate synthase in2 complex with magnesium and gpp PDB header:transferase Chain: A: PDB Molecule:geranylgeranyl pyrophosphate synthase; 16 c3lmdA_ 96.6 8 Alignment PDBTitle: crystal structure of geranylgeranyl pyrophosphate synthase2 from corynebacterium glutamicum atcc 13032 PDB header:transferase Chain: A: PDB Molecule:octaprenyl pyrophosphate synthase; 17 c3tc1A_ 96.6 15 Alignment PDBTitle: crystal structure of octaprenyl pyrophosphate synthase from2 helicobacter pylori Fold:Terpenoid synthases 18 d1rtra_ Alignment 96.4 11 Superfamily:Terpenoid synthases Family:Isoprenyl diphosphate synthases PDB header:transferase Chain: B: PDB Molecule:geranyltranstransferase; 19 c3ts7B_ 96.2 12 Alignment PDBTitle: crystal structure of farnesyl diphosphate synthase (target efi-501951)2 from methylococcus capsulatus PDB header:transferase Chain: A: PDB Molecule:geranylgeranyl pyrophosphate synthase; 20 c3lk5A_ 95.7 12 Alignment PDBTitle: crystal structure of putative geranylgeranyl pyrophosphate synthase2 from corynebacterium glutamicum PDB header:transferase Chain: A: PDB Molecule:trans-isoprenyl diphosphate synthase; 21 c3oyrA_ Alignment not modelled 95.4 10 PDBTitle: crystal structure of polyprenyl synthase from caulobacter crescentus2 cb15 complexed with calcium and isoprenyl diphosphate PDB header:transferase Chain: B: PDB Molecule:geranyltranstransferase; 22 c3ucaB_ not modelled 95.3 15 Alignment PDBTitle: crystal structure of isoprenoid synthase (target efi- 501974) from2 clostridium perfringens PDB header:transferase Chain: B: PDB Molecule:farnesyl diphosphate synthase; 23 c3m0gB_ not modelled 94.8 18 Alignment PDBTitle: crystal structure of putative farnesyl diphosphate synthase from2 rhodobacter capsulatus PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; 24 c3ipiA_ not modelled 94.5 11 Alignment PDBTitle: crystal structure of a geranyltranstransferase from the2 methanosarcina mazei PDB header:transferase Chain: A: PDB Molecule:farnesyl pyrophosphate synthetase; 25 c3cp6A_ not modelled 94.4 15 Alignment PDBTitle: crystal structure of human farnesyl diphosphate synthase (t201a2 mutant) complexed with mg and biphosphonate inhibitor PDB header:lyase Chain: A: PDB Molecule:isoprene synthase; 26 c3n0fA_ not modelled 94.4 14 Alignment PDBTitle: crystal structure of isoprene synthase from grey poplar leaves2 (populus x canescens) PDB header:transferase Chain: B: PDB Molecule:geranylgeranyl pyrophosphate 27 c2azjB_ Alignment not modelled 94.4 12 synthetase; PDBTitle: crystal structure for the mutant d81c of sulfolobus2 solfataricus hexaprenyl pyrophosphate synthase PDB header:transferase Chain: A: PDB Molecule:geranylgeranyl diphosphate synthetase; 28 c1wmwA_ Alignment not modelled 94.3 17 28 c1wmwA_ not modelled 94.3 17 Alignment PDBTitle: crystal structure of geranulgeranyl diphosphate synthase from thermus2 thermophilus PDB header:lyase Chain: A: PDB Molecule:epi-isozizaene synthase; 29 c3lg5A_ not modelled 93.9 11 Alignment PDBTitle: f198a epi-isozizaene synthase: complex with mg, inorganic2 pyrophosphate and benzyl triethyl ammonium cation Fold:Terpenoid synthases 30 d1fpsa_ Alignment not modelled 93.2 13 Superfamily:Terpenoid synthases Family:Isoprenyl diphosphate synthases PDB header:transferase Chain: A: PDB Molecule:farnesyl pyrophosphate synthase; 31 c1yhlA_ not modelled 93.0 17 Alignment PDBTitle: structure of the complex of trypanosoma cruzi farnesyl diphosphate2 synthase with risedronate, dmapp and mg+2 PDB header:lyase 32 c1hx9A_ Alignment not modelled 93.0 15 Chain: A: PDB Molecule:5-epi-aristolochene synthase; PDBTitle: crystal structure of teas w273s form 1 Fold:Terpenoid synthases 33 d5easa2 Alignment not modelled 92.2 15 Superfamily:Terpenoid synthases Family:Terpenoid cyclase C-terminal domain PDB header:transferase Chain: B: PDB Molecule:geranylgeranyl pyrophosphate 34 c2j1pB_ Alignment not modelled 92.1 16 synthetase; PDBTitle: geranylgeranyl diphosphate synthase from sinapis alba in2 complex with ggpp Fold:Terpenoid synthases 35 d1rqja_ Alignment not modelled 91.5 13 Superfamily:Terpenoid synthases Family:Isoprenyl diphosphate synthases PDB header:lyase Chain: B: PDB Molecule:(+)-delta-cadinene synthase isozyme xc1; 36 c3g4dB_ not modelled 91.3 17 Alignment PDBTitle: crystal structure of (+)-delta-cadinene synthase from gossypium2 arboreum and evolutionary divergence of metal binding motifs for3 catalysis PDB header:isomerase Chain: A: PDB Molecule:(+)-bornyl diphosphate synthase; 37 c1n20A_ not modelled 90.5 15 Alignment PDBTitle: (+)-bornyl diphosphate synthase: complex with mg and 3-aza-2 2,3-dihydrogeranyl diphosphate Fold:Terpenoid synthases 38 d1n1ba2 Alignment not modelled 90.3 14 Superfamily:Terpenoid synthases Family:Terpenoid cyclase C-terminal domain PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative farnesyl pyrophosphate 39 c2o1oB_ Alignment not modelled 90.1 14 synthase; PDBTitle: cryptosporidium parvum putative polyprenyl pyrophosphate2 synthase (cgd4_2550) in complex with risedronate. PDB header:lyase Chain: A: PDB Molecule:farnesyl pyrophosphate synthase, putative; 40 c3ez3A_ not modelled 89.9 13 Alignment PDBTitle: crystal structure of plasmodium vivax geranylgeranylpyrophosphate2 synthase pvx_092040 with zoledronate and ipp bound PDB header:transferase Chain: F: PDB Molecule:farnesyl diphosphate synthase; 41 c2f94F_ not modelled 88.7 15 Alignment PDBTitle: crystal structure of human fpps in complex with ibandronate PDB header:transferase Chain: B: PDB Molecule:geranyl diphosphate synthase small 42 c3qkcB_ Alignment not modelled 87.8 13 subunit; PDBTitle: crystal structure of geranyl diphosphate synthase small subunit from2 antirrhinum majus Fold:Terpenoid synthases 43 d1ps1a_ Alignment not modelled 86.9 7 Superfamily:Terpenoid synthases Family:Aristolochene/pentalenene synthase PDB header:lyase Chain: B: PDB Molecule:1,8-cineole synthase; 44 c2j5cB_ Alignment not modelled 85.0 14 PDBTitle: rational conversion of substrate and product specificity2 in a monoterpene synthase. structural insights into the3 molecular basis of rapid evolution. PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; 45 c3p8rA_ not modelled 84.7 14 Alignment PDBTitle: crystal structure of polyprenyl synthase from vibrio cholerae PDB header:transferase Chain: B: PDB Molecule:geranyltranstransferase; 46 c3p8lB_ not modelled 84.5 13 Alignment PDBTitle:
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