The Age of Chocolate: a Diversification History of Theobroma and Malvaceae
ORIGINAL RESEARCH published: 10 November 2015 doi: 10.3389/fevo.2015.00120 The age of chocolate: a diversification history of Theobroma and Malvaceae James E. Richardson 1, 2*, Barbara A. Whitlock 3, Alan W. Meerow 4 and Santiago Madriñán 5 1 Programa de Biología, Universidad del Rosario, Bogotá, Colombia, 2 Tropical Diversity Section, Royal Botanic Garden Edinburgh, Edinburgh, UK, 3 Department of Biology, University of Miami, Coral Gables, FL, USA, 4 United States Department of Agriculture—ARS—SHRS, National Clonal Germplasm Repository, Miami, FL, USA, 5 Laboratorio de Botánica y Sistemática, Departamento de Ciencias Biológicas, Universidad de los Andes, Bogotá, Colombia Dated molecular phylogenies of broadly distributed lineages can help to compare patterns of diversification in different parts of the world. An explanation for greater Neotropical diversity compared to other parts of the tropics is that it was an accident of the Andean orogeny. Using dated phylogenies, of chloroplast ndhF and nuclear DNA WRKY sequence datasets, generated using BEAST we demonstrate that the diversification of the genera Theobroma and Herrania occurred from 12.7 (11.6–14.9 [95% HPD]) million years ago (Ma) and thus coincided with Andean uplift from the mid-Miocene and that this lineage had a faster diversification rate than other major clades in Malvaceae. We also demonstrate that Theobroma cacao, the source of chocolate, diverged from its most recent common ancestor 9.9 (7.7–12.9 [95% HPD]) Ma, in the Edited by: Federico Luebert, mid-to late-Miocene, suggesting that this economically important species has had ample Universität Bonn, Germany time to generate significant within-species genetic diversity that is useful information Reviewed by: for a developing chocolate industry.
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