Beneficial Genotype of Swine FUT1 Gene Governing Resistance to E. Coli F18 Is Associated with Important Economic Traits

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Beneficial Genotype of Swine FUT1 Gene Governing Resistance to E. Coli F18 Is Associated with Important Economic Traits c Indian Academy of Sciences RESEARCH NOTE Beneficial genotype of swine FUT1 gene governing resistance to E. coli F18 is associated with important economic traits WEN-BIN BAO1,4, LAN YE1, ZHANG-YUAN PAN1,JINZHU1, GUO-QIANG ZHU2,4, XUE-GEN HUANG3,4 and SHENG-LONG WU1,4∗ 1Key Laboratory for Animal Genetics, Breeding, Reproduction and Molecular Design of Jiangsu Province, College of Animal Science and Technology, and 2College of Veterinary Medicine, Yangzhou University, Yangzhou, Jiangsu 225009, People’s Republic of China 3Suzhou Taihu Pig Breeding Centre, Jiangsu Province, Suzhou, Jiangsu 215000, People’s Republic of China 4Jiangsu Engineering Research Centre for Molecular Breeding of Pig, Changzhou, Jiangsu 213149, People’s Republic of China [Bao W.-B., Ye L., Pan Z.-Y., Zhu J., Zhu G.-Q., Huang X.-G. and Wu S.-L. 2011 Beneficial genotype of swine FUT1 gene governing resistance to E. coli F18 is associated with important economic traits. J. Genet. 90, 315–318] Introduction breeds (Shi et al. 2003;Yanet al. 2004;Wuet al. 2006;Bao et al. 2008). The above results suggested that it is not fea- Porcine post-weaning diarrhoea (PWD) and porcine edema sible to select AA resistant genotype in FUT1 directly from disease (ED) are bacterial diseases caused by enterotoxigenic Chinese native pig breeds. In addition, we should target the Escherichia coli F18 (ETEC F18). These diseases cause breeding of ETEC F18 resistant breeds in imported breeds economic loss to the swine industry. The pathogenicity of only. ECF18 bacteria depends on the existence of ECF18 receptor Sutai pig is the hybridization product of Duroc and Taihu in the brush border membranes of the small intestinal mucosa pigs after 15 years of practices. In 1999, it was approved by in piglets (Nagy and Fekete 1999). Using the candidate gene National Committee of Livestock and Poultry Species as a approach and linkage analysis, Vogeli et al. (1997) demon- α new breed. Using a small number of AG type (9.2%) indi- strated that (1, 2)-fucosyltransferase gene (FUT1) in chro- viduals in FUT1 gene detected from Sutai pigs, our group mosome 6qll is the candidate gene controlling the adhesion conducted proper selection and assortative mating. While to F18 receptor. Research by Meijerink et al. (1997) showed we were working on the selective breeding for resistance to the existence of a G/A mutation at nucleotide 307 of FUT1 ETEC F18 in Sutai pig, we paid careful attention not only open reading frame (ORF); and that pigs with genotype AA to the resistant varieties of ETEC F18 but also to the stabil- are resistant to ETEC F18 and pigs with genotype GG or the ity and improvement of some important economic traits and heterozygote AG are sensitive to ETEC F18. Breeding for general disease resistance ability. The effects on these addi- disease resistance could be implemented by marker-assisted tional traits directly determine the feasibility of further breed- selection using FUT1 gene as the ETEC F18R candidate ing for diseases resistance. Based on the polymorphic detec- gene (Meijerink et al. 1997). In another study, we adopted in tion of FUT1 gene in the breeding base population of Sutai vivo adherent experiment of pig intestinal epithelial cells and pigs resistant to ETEC F18, we analysed the relationship of F18 E. coli and showed that the intestinal epithelial cells of these genotypes to the growth and development, and repro- piglets with GG and AG genotypes in FUT1 gene can adhere ductive ability. Therefore, we could further study the genetic to the wild E. coli and can also adhere to the recombined effect of FUT1 gene. This is necessary for designing the new E. coli which is expressing F18 pilus and F18 subunit F resistance varieties system of Sutai pigs in future. in vitro (Wu et al. 2006). While studying the polymorphism at nucleotide 307 of FUT1 ORF in Chinese native pig breeds and imported breeds, some Chinese researchers found that the AA resistant Materials and methods genotype polymorphism at M307 was detected in imported Experimental materials breeds, the AA genotype was not found in any Chinese native Small amount of AG type (9.2%) individuals in FUT1 gene ∗ For correspondence. E-mail: [email protected]. detected from Sutai pigs were used for proper selection Keywords. pig; FUT1 gene; growth and development; reproductive performance. Journal of Genetics, Vol. 90, No. 2, August 2011 315 Wen-Bin Bao et al. and assortative mating to establish an ETEC F18 resistant B-ultrasound scanner: scapuloposterior position around the resource population of 576 Sutai pigs. About 1.0 g of ear 4th or 5th rib, last rib, and lumbosacral junction at 4 cm tissue was collected from every individual and placed into to the dorsal line) of 60-kg pigs (gilt pigs) were measured. a 1.5 mL Eppendoff tube in ice boxes before taking to the After reaching reproductive ability stable for the 3rd and lab. A routine phenol–chloroform method was used to extract 4th parity, the total number born (TNB), number born alive DNA from each sample. (NBA), body weight of litter (BWL), number of alive wean- ing litter (NW) and weaning weight of litter (WWL) were PCR-RFLP analysis measured. Using the general linear model (GLM) in SPSS ver- Primers: 5 -CCA ACG CCT CCG ATT CCT GT-3 and sion 11.5 software (SPSS, Chicago, USA), several charac- 5 -GTG CAT GGC AGG CTG GAT GA-3 were designed teristic values and relationship between different genotypes according to FUT1 gene sequence in GenBank (accession after endonuclease digestion were predicted by least square no. L50534). Exactly 25 μL of PCR product included 100 ng procedure. of template DNA, 5 pmol of each primer, 10× PCR Buffer, 2 mM dNTP mixture and 1 U of Taq DNA polymerase (TakaRa, Dalian, China) was used. PCR conditions carried out by thermal cycle, were 95◦C for 5 min, and then 94◦Cfor 40 s, 60◦C for 40 s, 72◦C for 45 s, 30 cycles and an exten- sion at 72◦C for 10 min. PCR products were checked in 1% Results and discussion agarose gels stained with ethidium bromide. PCR product, PCR-RFLP analysis for FUT1 gene 10 μL each, was digested overnight at 37◦Cby2UofHin6I (Sangon, Shanghai, China) restriction enzyme. The digested PCR products were detected with 1% agarose electrophore- fragments were electrophoresed in 10% polyacrylamide gels sis. A clear specific DNA band was shown at position 161 bp in 1× TBE at a constant voltage of 120 V, stained by silver which agreed with the predicted amplified fragment size and visualized under ultraviolet light using transilluminator. There is a restriction recognition site for Hin6I at position M307 in FUT1 gene that can be completely digested by Hin6I to produce GG phenotype (117/44 bp). If this posi- Performance measurement and statistic analysis tion has a G→A mutation, Hin6I enzyme would not be Individual body weight of breeding base population of Sutai able to digest the fragment resulting in AA type (161 bp). pigs was measured for newborn litter and 35-day-weaning When both alleles are existed together they produced AG litter. The body length, height, back width and back fat thick- type (161/117/44 bp). The restriction map is shown in ness (three points averages were detected for live body by figure 1. Figure 1. The genotyping results of FUTI gene by PCR-RFLP. Lanes 2, 4 were GG genotype; lanes 6, 7, 8 were AA genotype; lanes 1, 3 and 5 were AG genotype. M was pUC19 DNA/Msp I marker (Sangon, Shanghai, China). 316 Journal of Genetics, Vol. 90, No. 2, August 2011 Growth correlates of porcine FUT1 Polymorphism of FUT1 gene in Sutai pigs table 1. The average growth and development of AA type was better than those of AG and GG types. The weaning weight Among the 576 samples, the number of AA, AG and GG of litter at 35th day of AA and AG types were significantly genotypes in FUT1 gene were 135, 351 and 90, respectively. higher than that of GG type (P < 0.05). The body length Their corresponding genotype frequencies were 0.235, 0.609 of AA type was significantly higher than that of AG and GG and 0.156. The gene frequency for disease resistant gene A types (P < 0.05), with no significant difference between AG was 0.540, while the frequency for sensitive gene G was and GG types (P > 0.05). The body height and back width of 0.460. Before the selective breeding, no AA genotype was AA type were both significantly higher than those of AG type detected in Sutai pigs. The frequencies for AG and GG geno- (P < 0.05), with no significant difference from those of GG types were 0.092 and 0.908, respectively. The gene fre- type (P > 0.05). In terms of back fat thickness, AA type was quency for disease resistant gene A was 0.046, while the lower than AG and GG types with no significant difference frequency for sensitive gene G was 0.954 (Bao et al. 2008). among genotypes. This suggests that the artificial selection (selectively main- Jiang et al. (2005) proposed that AA genotype is a benefi- taining AG and AA types) substantially affected the FUT1 cial genotype for meat quality and carcass traits. Increasing gene distribution in the breeding base population of Sutai the frequency of the A allele not only enhances the groups’ pigs resistant to ETEC F18. anti-disease ability, but also improves the meat quality and carcass traits. He et al. (2006) found the fat content of pig with AA type in FUT1 gene was lower than that of AG and Relationship between FUT1 gene polymorphism, early growth GG types, with larger amount of total meat than AG and and development GG types and better meat quality than GG type.
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