Tetrahedral Units: Fordodecahedral Super-Structures Y. Ortiz A,B, D. J. Kleina, & J. F. Liebmanc a MARS, Texas A&M Unive
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Archimedean Solids
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln MAT Exam Expository Papers Math in the Middle Institute Partnership 7-2008 Archimedean Solids Anna Anderson University of Nebraska-Lincoln Follow this and additional works at: https://digitalcommons.unl.edu/mathmidexppap Part of the Science and Mathematics Education Commons Anderson, Anna, "Archimedean Solids" (2008). MAT Exam Expository Papers. 4. https://digitalcommons.unl.edu/mathmidexppap/4 This Article is brought to you for free and open access by the Math in the Middle Institute Partnership at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in MAT Exam Expository Papers by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Archimedean Solids Anna Anderson In partial fulfillment of the requirements for the Master of Arts in Teaching with a Specialization in the Teaching of Middle Level Mathematics in the Department of Mathematics. Jim Lewis, Advisor July 2008 2 Archimedean Solids A polygon is a simple, closed, planar figure with sides formed by joining line segments, where each line segment intersects exactly two others. If all of the sides have the same length and all of the angles are congruent, the polygon is called regular. The sum of the angles of a regular polygon with n sides, where n is 3 or more, is 180° x (n – 2) degrees. If a regular polygon were connected with other regular polygons in three dimensional space, a polyhedron could be created. In geometry, a polyhedron is a three- dimensional solid which consists of a collection of polygons joined at their edges. The word polyhedron is derived from the Greek word poly (many) and the Indo-European term hedron (seat). -
The Cubic Groups
The Cubic Groups Baccalaureate Thesis in Electrical Engineering Author: Supervisor: Sana Zunic Dr. Wolfgang Herfort 0627758 Vienna University of Technology May 13, 2010 Contents 1 Concepts from Algebra 4 1.1 Groups . 4 1.2 Subgroups . 4 1.3 Actions . 5 2 Concepts from Crystallography 6 2.1 Space Groups and their Classification . 6 2.2 Motions in R3 ............................. 8 2.3 Cubic Lattices . 9 2.4 Space Groups with a Cubic Lattice . 10 3 The Octahedral Symmetry Groups 11 3.1 The Elements of O and Oh ..................... 11 3.2 A Presentation of Oh ......................... 14 3.3 The Subgroups of Oh ......................... 14 2 Abstract After introducing basics from (mathematical) crystallography we turn to the description of the octahedral symmetry groups { the symmetry group(s) of a cube. Preface The intention of this account is to provide a description of the octahedral sym- metry groups { symmetry group(s) of the cube. We first give the basic idea (without proofs) of mathematical crystallography, namely that the 219 space groups correspond to the 7 crystal systems. After this we come to describing cubic lattices { such ones that are built from \cubic cells". Finally, among the cubic lattices, we discuss briefly the ones on which O and Oh act. After this we provide lists of the elements and the subgroups of Oh. A presentation of Oh in terms of generators and relations { using the Dynkin diagram B3 is also given. It is our hope that this account is accessible to both { the mathematician and the engineer. The picture on the title page reflects Ha¨uy'sidea of crystal structure [4]. -
VOLUME of POLYHEDRA USING a TETRAHEDRON BREAKUP We
VOLUME OF POLYHEDRA USING A TETRAHEDRON BREAKUP We have shown in an earlier note that any two dimensional polygon of N sides may be broken up into N-2 triangles T by drawing N-3 lines L connecting every second vertex. Thus the irregular pentagon shown has N=5,T=3, and L=2- With this information, one is at once led to the question-“ How can the volume of any polyhedron in 3D be determined using a set of smaller 3D volume elements”. These smaller 3D eelements are likely to be tetrahedra . This leads one to the conjecture that – A polyhedron with more four faces can have its volume represented by the sum of a certain number of sub-tetrahedra. The volume of any tetrahedron is given by the scalar triple product |V1xV2∙V3|/6, where the three Vs are vector representations of the three edges of the tetrahedron emanating from the same vertex. Here is a picture of one of these tetrahedra- Note that the base area of such a tetrahedron is given by |V1xV2]/2. When this area is multiplied by 1/3 of the height related to the third vector one finds the volume of any tetrahedron given by- x1 y1 z1 (V1xV2 ) V3 Abs Vol = x y z 6 6 2 2 2 x3 y3 z3 , where x,y, and z are the vector components. The next question which arises is how many tetrahedra are required to completely fill a polyhedron? We can arrive at an answer by looking at several different examples. Starting with one of the simplest examples consider the double-tetrahedron shown- It is clear that the entire volume can be generated by two equal volume tetrahedra whose vertexes are placed at [0,0,sqrt(2/3)] and [0,0,-sqrt(2/3)]. -
Can Every Face of a Polyhedron Have Many Sides ?
Can Every Face of a Polyhedron Have Many Sides ? Branko Grünbaum Dedicated to Joe Malkevitch, an old friend and colleague, who was always partial to polyhedra Abstract. The simple question of the title has many different answers, depending on the kinds of faces we are willing to consider, on the types of polyhedra we admit, and on the symmetries we require. Known results and open problems about this topic are presented. The main classes of objects considered here are the following, listed in increasing generality: Faces: convex n-gons, starshaped n-gons, simple n-gons –– for n ≥ 3. Polyhedra (in Euclidean 3-dimensional space): convex polyhedra, starshaped polyhedra, acoptic polyhedra, polyhedra with selfintersections. Symmetry properties of polyhedra P: Isohedron –– all faces of P in one orbit under the group of symmetries of P; monohedron –– all faces of P are mutually congru- ent; ekahedron –– all faces have of P the same number of sides (eka –– Sanskrit for "one"). If the number of sides is k, we shall use (k)-isohedron, (k)-monohedron, and (k)- ekahedron, as appropriate. We shall first describe the results that either can be found in the literature, or ob- tained by slight modifications of these. Then we shall show how two systematic ap- proaches can be used to obtain results that are better –– although in some cases less visu- ally attractive than the old ones. There are many possible combinations of these classes of faces, polyhedra and symmetries, but considerable reductions in their number are possible; we start with one of these, which is well known even if it is hard to give specific references for precisely the assertion of Theorem 1. -
Just (Isomorphic) Friends: Symmetry Groups of the Platonic Solids
Just (Isomorphic) Friends: Symmetry Groups of the Platonic Solids Seth Winger Stanford University|MATH 109 9 March 2012 1 Introduction The Platonic solids have been objects of interest to mankind for millennia. Each shape—five in total|is made up of congruent regular polygonal faces: the tetrahedron (four triangular sides), the cube (six square sides), the octahedron (eight triangular sides), the dodecahedron (twelve pentagonal sides), and the icosahedron (twenty triangular sides). They are prevalent in everything from Plato's philosophy, where he equates them to the four classical elements and a fifth heavenly aether, to middle schooler's role playing games, where Platonic dice determine charisma levels and who has to get the next refill of Mountain Dew. Figure 1: The five Platonic solids (http://geomag.elementfx.com) In this paper, we will examine the symmetry groups of these five solids, starting with the relatively simple case of the tetrahedron and moving on to the more complex shapes. The rotational symmetry groups of the solids share many similarities with permutation groups, and these relationships will be shown to be an isomorphism that can then be exploited when discussing the Platonic solids. The end goal is the most complex case: describing the symmetries of the icosahedron in terms of A5, the group of all sixty even permutations in the permutation group of degree 5. 2 The Tetrahedron Imagine a tetrahedral die, where each vertex is labeled 1, 2, 3, or 4. Two or three rolls of the die will show that rotations can induce permutations of the vertices|a different number may land face up on every throw, for example|but how many such rotations and permutations exist? There are two main categories of rotation in a tetrahedron: r, those around an axis that runs from a vertex of the solid to the centroid of the opposing face; and q, those around an axis that runs from midpoint to midpoint of opposing edges (see Figure 2). -
Cycloalkanes, Cycloalkenes, and Cycloalkynes
CYCLOALKANES, CYCLOALKENES, AND CYCLOALKYNES any important hydrocarbons, known as cycloalkanes, contain rings of carbon atoms linked together by single bonds. The simple cycloalkanes of formula (CH,), make up a particularly important homologous series in which the chemical properties change in a much more dramatic way with increasing n than do those of the acyclic hydrocarbons CH,(CH,),,-,H. The cyclo- alkanes with small rings (n = 3-6) are of special interest in exhibiting chemical properties intermediate between those of alkanes and alkenes. In this chapter we will show how this behavior can be explained in terms of angle strain and steric hindrance, concepts that have been introduced previously and will be used with increasing frequency as we proceed further. We also discuss the conformations of cycloalkanes, especially cyclo- hexane, in detail because of their importance to the chemistry of many kinds of naturally occurring organic compounds. Some attention also will be paid to polycyclic compounds, substances with more than one ring, and to cyclo- alkenes and cycloalkynes. 12-1 NOMENCLATURE AND PHYSICAL PROPERTIES OF CYCLOALKANES The IUPAC system for naming cycloalkanes and cycloalkenes was presented in some detail in Sections 3-2 and 3-3, and you may wish to review that ma- terial before proceeding further. Additional procedures are required for naming 446 12 Cycloalkanes, Cycloalkenes, and Cycloalkynes Table 12-1 Physical Properties of Alkanes and Cycloalkanes Density, Compounds Bp, "C Mp, "C diO,g ml-' propane cyclopropane butane cyclobutane pentane cyclopentane hexane cyclohexane heptane cycloheptane octane cyclooctane nonane cyclononane "At -40". bUnder pressure. polycyclic compounds, which have rings with common carbons, and these will be discussed later in this chapter. -
Chapter 3: Transformations Groups, Orbits, and Spaces of Orbits
Preprint typeset in JHEP style - HYPER VERSION Chapter 3: Transformations Groups, Orbits, And Spaces Of Orbits Gregory W. Moore Abstract: This chapter focuses on of group actions on spaces, group orbits, and spaces of orbits. Then we discuss mathematical symmetric objects of various kinds. May 3, 2019 -TOC- Contents 1. Introduction 2 2. Definitions and the stabilizer-orbit theorem 2 2.0.1 The stabilizer-orbit theorem 6 2.1 First examples 7 2.1.1 The Case Of 1 + 1 Dimensions 11 3. Action of a topological group on a topological space 14 3.1 Left and right group actions of G on itself 19 4. Spaces of orbits 20 4.1 Simple examples 21 4.2 Fundamental domains 22 4.3 Algebras and double cosets 28 4.4 Orbifolds 28 4.5 Examples of quotients which are not manifolds 29 4.6 When is the quotient of a manifold by an equivalence relation another man- ifold? 33 5. Isometry groups 34 6. Symmetries of regular objects 36 6.1 Symmetries of polygons in the plane 39 3 6.2 Symmetry groups of some regular solids in R 42 6.3 The symmetry group of a baseball 43 7. The symmetries of the platonic solids 44 7.1 The cube (\hexahedron") and octahedron 45 7.2 Tetrahedron 47 7.3 The icosahedron 48 7.4 No more regular polyhedra 50 7.5 Remarks on the platonic solids 50 7.5.1 Mathematics 51 7.5.2 History of Physics 51 7.5.3 Molecular physics 51 7.5.4 Condensed Matter Physics 52 7.5.5 Mathematical Physics 52 7.5.6 Biology 52 7.5.7 Human culture: Architecture, art, music and sports 53 7.6 Regular polytopes in higher dimensions 53 { 1 { 8. -
Inverted Geometries at Carbon
Acc. Chem. Res. 1984,17, 379-386 379 Inverted Geometries at Carbon KENNETHB. WIBERG Department of Chemistry, Yale University, New Haven, Connecticut 06511 Received March 3, 1984 (Revised Manuscript Received June 25, 1984) One of the main structural elements in organic Scheme I chemistry is the tetrahedral geometry of a four-coor- dinate carbon. Distortions from a perfect tetrahedron are common, but they are generally fairly small. It is, + HOAc - however, possible to "invert" the normal geometry via OAc a C3" or "umbrella" motion leading to a set of com- pounds having all of the groups attached to some car- bon lying on one side of a plane.'J Preparative Methods A number of compounds that are constrained to have The first of these compounds to be prepared is 6 that this type of structure have now been prepared. The is readily obtained from bicyclo[3.2.0]hex-l(5)-ene17via methods of preparation and their reactions and prop- cycloaddition reactions.lJ4 The structure of the di- erties will be described belowq3 It should be noted that (1) K. B. Wiberg, J. E. Hiatt, and G. J. Burgmaier, Tetrahedron Lett., inverted geometries may in some cases be found in the 5855 (1968). absence of structural constraint. Bicyclo[ l.l.0]butane4 (2)'K. B. Wiberg, G. B. Ellison, and J. J. Wendoloski, J. Am. Chem. and its derivatives5 are notable examples, and the re- SOC.,98, 1212 (1976). (3) For a review of earlier work on 'propellanes" see D. Ginsberg, lationship between the geometry at the bridgehead and "Propellanes", Verlag Chemie, Weinheim, 1975, and reference 8. -
New Perspectives on Polyhedral Molecules and Their Crystal Structures Santiago Alvarez, Jorge Echeverria
New Perspectives on Polyhedral Molecules and their Crystal Structures Santiago Alvarez, Jorge Echeverria To cite this version: Santiago Alvarez, Jorge Echeverria. New Perspectives on Polyhedral Molecules and their Crystal Structures. Journal of Physical Organic Chemistry, Wiley, 2010, 23 (11), pp.1080. 10.1002/poc.1735. hal-00589441 HAL Id: hal-00589441 https://hal.archives-ouvertes.fr/hal-00589441 Submitted on 29 Apr 2011 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Journal of Physical Organic Chemistry New Perspectives on Polyhedral Molecules and their Crystal Structures For Peer Review Journal: Journal of Physical Organic Chemistry Manuscript ID: POC-09-0305.R1 Wiley - Manuscript type: Research Article Date Submitted by the 06-Apr-2010 Author: Complete List of Authors: Alvarez, Santiago; Universitat de Barcelona, Departament de Quimica Inorganica Echeverria, Jorge; Universitat de Barcelona, Departament de Quimica Inorganica continuous shape measures, stereochemistry, shape maps, Keywords: polyhedranes http://mc.manuscriptcentral.com/poc Page 1 of 20 Journal of Physical Organic Chemistry 1 2 3 4 5 6 7 8 9 10 New Perspectives on Polyhedral Molecules and their Crystal Structures 11 12 Santiago Alvarez, Jorge Echeverría 13 14 15 Departament de Química Inorgànica and Institut de Química Teòrica i Computacional, 16 Universitat de Barcelona, Martí i Franquès 1-11, 08028 Barcelona (Spain). -
The Platonic Solids
The Platonic Solids William Wu [email protected] March 12 2004 The tetrahedron, the cube, the octahedron, the dodecahedron, and the icosahedron. From a ¯rst glance, one immediately notices that the Platonic Solids exhibit remarkable symmetry. They are the only convex polyhedra for which the same same regular polygon is used for each face, and the same number of faces meet at each vertex. Their symmetries are aesthetically pleasing, like those of stones cut by a jeweler. We can further enhance our appreciation of these solids by examining them under the lenses of group theory { the mathematical study of symmetry. This article will discuss the group symmetries of the Platonic solids using a variety of concepts, including rotations, reflections, permutations, matrix groups, duality, homomorphisms, and representations. 1 The Tetrahedron 1.1 Rotations We will begin by studying the symmetries of the tetrahedron. If we ¯rst restrict ourselves to rotational symmetries, we ask, \In what ways can the tetrahedron be rotated such that the result appears identical to what we started with?" The answer is best elucidated with the 1 Figure 1: The Tetrahedron: Identity Permutation aid of Figure 1. First consider the rotational axis OA, which runs from the topmost vertex through the center of the base. Note that we can repeatedly rotate the tetrahedron about 360 OA by 3 = 120 degrees to ¯nd two new symmetries. Since each face of the tetrahedron can be pierced with an axis in this fashion, we have found 4 £ 2 = 8 new symmetries. Figure 2: The Tetrahedron: Permutation (14)(23) Now consider rotational axis OB, which runs from the midpoint of one edge to the midpoint of the opposite edge. -
UNIVERSITY of CALIFORNIA Los Angeles Design, Structural
UNIVERSITY OF CALIFORNIA Los Angeles Design, Structural Characterization and Application of High Symmetry Protein Nanocages A dissertation submitted in partial satisfaction of the requirements for the degree Doctor of Philosophy in Chemistry by Kevin Alexander Cannon 2019 © Copyright by Kevin Alexander Cannon 2019 ABSTRACT OF THE DISSERTATION Design, Structural Characterization and Application of High Symmetry Protein Nanocages by Kevin Alexander Cannon Doctor of Philosophy in Chemistry University of California, Los Angeles, 2019 Professor Todd O. Yeates, Chair In nature, it is extremely common to find proteins that assemble into homo-oligomeric complexes from multiple copies of themselves. Almost half of known proteins form such complexes, most of which are cyclically or dihedrally symmetric. In some exceptional cases, however, protein molecules will self-assemble into much larger, closed three-dimensional geometries resembling the Platonic solids. Examples include icosahedral viral capsids, bacterial microcompartment shells, and octahedral ferritin assemblies. Protein scientists have studied and marveled at these exquisite protein cage structures for decades, and some have even ventured to produce novel types of protein cage assemblies unseen in nature through their own engineering efforts. In recent years, the field of protein design has seen striking progress in the development of design methodologies for taking proteins found in nature and modifying them to self-assemble into cages of tetrahedral, octahedral, or icosahedral point group symmetry, and these unique new ii types of protein assemblies are even beginning to find use in medicine, imaging, and biomaterials applications. My thesis work addresses both the design and application areas of the field of symmetric protein cage design. -
Molecular Symmetry 6
Molecular symmetry 6 Symmetry governs the bonding and hence the physical and spectroscopic properties of molecules. An introduction to symmetry In this chapter we explore some of the consequences of molecular symmetry and introduce the analysis systematic arguments of group theory. We shall see that symmetry considerations are essential for 6.1 Symmetry operations, elements constructing molecular orbitals and analysing molecular vibrations. They also enable us to extract and point groups information about molecular and electronic structure from spectroscopic data. 6.2 Character tables The systematic treatment of symmetry makes use of a branch of mathematics called group Applications of symmetry theory. Group theory is a rich and powerful subject, but we shall confine our use of it at 6.3 Polar molecules this stage to the classification of molecules in terms of their symmetry properties, the con- 6.4 Chiral molecules struction of molecular orbitals, and the analysis of molecular vibrations and the selection 6.5 Molecular vibrations rules that govern their excitation. We shall also see that it is possible to draw some general conclusions about the properties of molecules without doing any calculations at all. The symmetries of molecular orbitals 6.6 Symmetry-adapted linear combinations 6.7 The construction of molecular orbitals An introduction to symmetry analysis 6.8 The vibrational analogy That some molecules are ‘more symmetrical’ than others is intuitively obvious. Our aim Representations though, is to define the symmetries of individual molecules precisely, not just intuitively, 6.9 The reduction of a representation and to provide a scheme for specifying and reporting these symmetries.