Freezing Points of Aqueous Alcohols: Free Energy of Interaction of the CHOH, CH₂, CONH and C[Double Bond]C Functional Groups in Dilute Aqueous Solutions
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Prediction of Osmotic Coefficients by Pair Correlation Function Method" (1991)
New Jersey Institute of Technology Digital Commons @ NJIT Dissertations Electronic Theses and Dissertations Spring 1-31-1991 Thermodynamics of strong electrolyte solutions : prediction of osmotic coefficientsy b pair correlation function method One Kwon Rim New Jersey Institute of Technology Follow this and additional works at: https://digitalcommons.njit.edu/dissertations Part of the Chemical Engineering Commons Recommended Citation Rim, One Kwon, "Thermodynamics of strong electrolyte solutions : prediction of osmotic coefficients by pair correlation function method" (1991). Dissertations. 1145. https://digitalcommons.njit.edu/dissertations/1145 This Dissertation is brought to you for free and open access by the Electronic Theses and Dissertations at Digital Commons @ NJIT. It has been accepted for inclusion in Dissertations by an authorized administrator of Digital Commons @ NJIT. For more information, please contact [email protected]. Copyright Warning & Restrictions The copyright law of the United States (Title 17, United States Code) governs the making of photocopies or other reproductions of copyrighted material. Under certain conditions specified in the law, libraries and archives are authorized to furnish a photocopy or other reproduction. One of these specified conditions is that the photocopy or reproduction is not to be “used for any purpose other than private study, scholarship, or research.” If a, user makes a request for, or later uses, a photocopy or reproduction for purposes in excess of “fair use” that user may be -
Thermodynamic Properties of 1:1 Salt Aqueous Solutions with the Electrolattice M
D o s s i e r This paper is a part of the hereunder thematic dossier published in OGST Journal, Vol. 68, No. 2, pp. 187-396 and available online here Cet article fait partie du dossier thématique ci-dessous publié dans la revue OGST, Vol. 68, n°2, pp. 187-396 et téléchargeable ici © Photos: IFPEN, Fotolia, X. DOI: 10.2516/ogst/2012094 DOSSIER Edited by/Sous la direction de : Jean-Charles de Hemptinne InMoTher 2012: Industrial Use of Molecular Thermodynamics InMoTher 2012 : Application industrielle de la thermodynamique moléculaire Oil & Gas Science and Technology – Rev. IFP Energies nouvelles, Vol. 68 (2013), No. 2, pp. 187-396 Copyright © 2013, IFP Energies nouvelles 187 > Editorial électrostatique ab initio X. Rozanska, P. Ungerer, B. Leblanc and M. Yiannourakou 217 > Improving the Modeling of Hydrogen Solubility in Heavy Oil Cuts Using an Augmented Grayson Streed (AGS) Approach 309 > Improving Molecular Simulation Models of Adsorption in Porous Materials: Modélisation améliorée de la solubilité de l’hydrogène dans des Interdependence between Domains coupes lourdes par l’approche de Grayson Streed Augmenté (GSA) Amélioration des modèles d’adsorption dans les milieux poreux R. Torres, J.-C. de Hemptinne and I. Machin par simulation moléculaire : interdépendance entre les domaines J. Puibasset 235 > Improving Group Contribution Methods by Distance Weighting Amélioration de la méthode de contribution du groupe en pondérant 319 > Performance Analysis of Compositional and Modified Black-Oil Models la distance du groupe For a Gas Lift Process A. Zaitseva and V. Alopaeus Analyse des performances de modèles black-oil pour le procédé d’extraction par injection de gaz 249 > Numerical Investigation of an Absorption-Diffusion Cooling Machine Using M. -
Solvent Effects on the Thermodynamic Functions of Dissociation of Anilines and Phenols
University of Wollongong Research Online University of Wollongong Thesis Collection 1954-2016 University of Wollongong Thesis Collections 1982 Solvent effects on the thermodynamic functions of dissociation of anilines and phenols Barkat A. Khawaja University of Wollongong Follow this and additional works at: https://ro.uow.edu.au/theses University of Wollongong Copyright Warning You may print or download ONE copy of this document for the purpose of your own research or study. The University does not authorise you to copy, communicate or otherwise make available electronically to any other person any copyright material contained on this site. You are reminded of the following: This work is copyright. Apart from any use permitted under the Copyright Act 1968, no part of this work may be reproduced by any process, nor may any other exclusive right be exercised, without the permission of the author. Copyright owners are entitled to take legal action against persons who infringe their copyright. A reproduction of material that is protected by copyright may be a copyright infringement. A court may impose penalties and award damages in relation to offences and infringements relating to copyright material. Higher penalties may apply, and higher damages may be awarded, for offences and infringements involving the conversion of material into digital or electronic form. Unless otherwise indicated, the views expressed in this thesis are those of the author and do not necessarily represent the views of the University of Wollongong. Recommended Citation Khawaja, Barkat A., Solvent effects on the thermodynamic functions of dissociation of anilines and phenols, Master of Science thesis, Department of Chemistry, University of Wollongong, 1982. -
Solvation Structure of Ions in Water
International Journal of Thermophysics, Vol. 28, No. 2, April 2007 (© 2007) DOI: 10.1007/s10765-007-0154-6 Solvation Structure of Ions in Water Raymond D. Mountain1 Molecular dynamics simulations of ions in water are reported for solutions of varying solute concentration at ambient conditions for six cations and four anions in 10 solutes. The solutes were selected to show trends in properties as the size and charge density of the ions change. The emphasis is on how the structure of water is modified by the presence of the ions and how many water molecules are present in the first solvation shell of the ions. KEY WORDS: anion; cation; molecular dynamics; potential functions; solva- tion; water. 1. INTRODUCTION The behavior of aqueous solutions of salts is a topic of continuing interest [1–3]. In this note we examine how the structure of water,as reflected in the oxy- gen–oxygen pair function, is modified as the concentration of ions increases. The method of generating the pair functions is molecular dynamics using the SPC/E model for water [4] and various models for ion–water interactions taken from the literature. The solutes are LiCl, NaCl, KCl, RbCl, NaF, CaCl2, CaSO4,Na2SO4, NaNO3, and guanidinium chloride (GdmCl) [C(NH2)3Cl]. This work is an extension of earlier work [5] to a larger set of ions. The water molecules and ions interact through site–site pair interac- tions consisting of Lennard–Jones potentials and Coulomb interactions so that the interaction between a pair of sites labeled i, j and separated by an interatomic distance r is 12 6 φij (r) = 4ij (σij /r) − (σij /r) + qiqj /r (1) where qi is the charge on site i. -
Affinity of Small-Molecule Solutes to Hydrophobic, Hydrophilic, and Chemically Patterned Interfaces in Aqueous Solution
Affinity of small-molecule solutes to hydrophobic, hydrophilic, and chemically patterned interfaces in aqueous solution Jacob I. Monroea, Sally Jiaoa, R. Justin Davisb, Dennis Robinson Browna, Lynn E. Katzb, and M. Scott Shella,1 aDepartment of Chemical Engineering, University of California, Santa Barbara, CA 93106; and bDepartment of Civil, Architectural and Environmental Engineering, University of Texas at Austin, Austin, TX 78712 Edited by Peter J. Rossky, Rice University, Houston, TX, and approved November 17, 2020 (received for review September 30, 2020) Performance of membranes for water purification is highly influ- However, a molecular understanding that links membrane enced by the interactions of solvated species with membrane surface chemistry to solute affinity and hence membrane func- surfaces, including surface adsorption of solutes upon fouling. tional properties remains incomplete, due in part to the complex Current efforts toward fouling-resistant membranes often pursue interplay among specific interactions (e.g., hydrogen bonds, surface hydrophilization, frequently motivated by macroscopic electrostatics, dispersion) and molecular morphology (e.g., sur- measures of hydrophilicity, because hydrophobicity is thought to face and polymer configurations) that are difficult to disentangle increase solute–surface affinity. While this heuristic has driven di- (11–14). Chemically heterogeneous surfaces are even less un- verse membrane functionalization strategies, here we build on derstood but can affect fouling in complex ways. -
The Cloud Point Composition and Flory-Huggins Interaction Parameters of Polyethylene Glycol and Sodium Lignin Sulfonate in Water - Ethanol Mixture
AN ABSTRACT OF THE THESIS OF Luh, Song - Ping for the degree of Master of Science in Chemical Engineering presented on July 22, 1987 Title: The Cloud Point Composition and Flory - Huggins Interaction Parameters of Polyethylene Glycol and Sodium Lignin Sulfonate in Water - Ethanol Mixtures Redacted for Privacy Abstract Approved: Willi J. Frederick/Jr. In designing a solubility based separation process for solvent recovery of an organosolv pulping process, the phase behavior of polymeric lignin molecules in alcohol - water mixed solvent should be known. In this study, sodium lignin sulfonates (NaLS) samples were fractionated into three different molecular weight fractions using a partial dissolution method. The cloud point compositions of each of the three fractions were determined by a cloud point titration method. The experimental data were correlated using the three component Flory - Huggins equation of the Gibbs free energy change of mixing. The binary interaction parameter between water and that between ethanol and NaLSwere found to be a weak function of the NaLS volume fraction, while that between water and ethanol was strongly depend on the solvent composition. The Cloud Point Composition and Flory - Huggins Interaction Parameters of Polyethylene Glycol and Sodium Lignin Sulfonate in Water - Ethanol Mixtures by Luh, Song - Ping A THESIS submitted to Oregon State University in partial fulfillment of the requirements for the degree of Master of Science Completed July 22, 1987 Commencement June 1988 APPROVED: Redacted for Privacy Associate P fessor of Chemi401 Engineering in charge of major Redacted for Privacy Head of Department of dlemical Engineering Redacted for Privacy Dean of Gradu School (I Date thesis is presented July 22, 1987 Typed by Luh, Song - Ping for Luh, Song - Ping TABLE OF CONTENTS Page INTRODUCTION 1 LITERATURE REVIEW 3 1. -
Role of Solvation in Drug Design As Revealed by the Statistical Mechanics Integral Equation Theory of Liquids Norio Yoshida*
Review Cite This: J. Chem. Inf. Model. 2017, 57, 2646-2656 pubs.acs.org/jcim Role of Solvation in Drug Design as Revealed by the Statistical Mechanics Integral Equation Theory of Liquids Norio Yoshida* Department of Chemistry, Graduate School of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395 Japan ABSTRACT: Recent developments and applications in theoretical methods focusing on drug design and particularly on the solvent effect in molecular recognition based on the three-dimensional reference interaction site model (3D-RISM) theory are reviewed. Molecular recognition, a fundamental molecular process in living systems, is known to be the functional mechanism of most drugs. Solvents play an essential role in molecular recognition processes as well as in ligand−protein interactions. The 3D-RISM theory is derived from the fundamental statistical mechanics theory, which reproduces all solvation thermodynamics naturally and has some advantages over conventional solvation methods, such as molecular simulation and the continuum model. Here, we review the basics of the 3D-RISM theory and methods of molecular recognition in its applications toward drug design. KEYWORDS: Drug design, Molecular recognition, Solvation, 3D-RISM ■ INTRODUCTION ΔGG=Δconf +Δ G int +Δ G solv (2) Molecular recognition is one of the most important where ΔGconf, ΔGint, and ΔGsolv denote the changes in the fundamental processes in biological systems and is known to 1 conformational energy, the interaction energy between ligand be the functional mechanism of most drugs. This is defined as a molecular process in which a ligand molecule is bound at a and protein, and the solvation free energy, respectively. -
Calculating the Partition Coefficients of Organic Solvents in Octanol/Water and Octanol/Air
Article Cite This: J. Chem. Inf. Model. XXXX, XXX, XXX−XXX pubs.acs.org/jcim Calculating the Partition Coefficients of Organic Solvents in Octanol/ Water and Octanol/Air † ‡ § ∥ Miroslava A. Nedyalkova,*, Sergio Madurga, Marek Tobiszewski, and Vasil Simeonov † Inorganic Chemistry Department, Faculty of Chemistry and Pharmacy, University of Sofia, Sofia 1164, Bulgaria ‡ Departament de Ciencià de Materials i Química Física and Institut de Química Teoricà i Computacional (IQTCUB), Universitat de Barcelona, 08028 Barcelona, Catalonia, Spain § Department of Analytical Chemistry, Faculty of Chemistry, Gdansḱ University of Technology (GUT), 80-233 Gdansk,́ Poland ∥ Analytical Chemistry Department, Faculty of Chemistry and Pharmacy, University of Sofia, Sofia 1164, Bulgaria *S Supporting Information ABSTRACT: Partition coefficients define how a solute is distributed between two immiscible phases at equilibrium. The experimental estimation of partition coefficients in a complex system can be an expensive, difficult, and time-consuming process. Here a computa- tional strategy to predict the distributions of a set of solutes in two relevant phase equilibria is presented. The octanol/water and octanol/air partition coefficients are predicted for a group of polar solvents using density functional theory (DFT) calculations in combination with a solvation model based on density (SMD) and are in excellent agreement with experimental data. Thus, the use of quantum-chemical calculations to predict partition coefficients from free energies should be a valuable alternative for unknown solvents. The obtained results indicate that the SMD continuum model in conjunction with any of the three DFT functionals (B3LYP, M06-2X, and M11) agrees with the observed experimental values. The highest correlation to experimental data for the octanol/water partition coefficients was reached by the M11 functional; for the octanol/air partition coefficient, the M06-2X functional yielded the best performance. -
Calculation of the Water-Octanol Partition Coefficient of Cholesterol for SPC, TIP3P, and TIP4P Water
Calculation of the water-octanol partition coefficient of cholesterol for SPC, TIP3P, and TIP4P water Cite as: J. Chem. Phys. 149, 224501 (2018); https://doi.org/10.1063/1.5054056 Submitted: 29 August 2018 . Accepted: 13 November 2018 . Published Online: 11 December 2018 Jorge R. Espinosa, Charlie R. Wand, Carlos Vega , Eduardo Sanz, and Daan Frenkel COLLECTIONS This paper was selected as an Editor’s Pick ARTICLES YOU MAY BE INTERESTED IN Common microscopic structural origin for water’s thermodynamic and dynamic anomalies The Journal of Chemical Physics 149, 224502 (2018); https://doi.org/10.1063/1.5055908 Improved general-purpose five-point model for water: TIP5P/2018 The Journal of Chemical Physics 149, 224507 (2018); https://doi.org/10.1063/1.5070137 Comparison of simple potential functions for simulating liquid water The Journal of Chemical Physics 79, 926 (1983); https://doi.org/10.1063/1.445869 J. Chem. Phys. 149, 224501 (2018); https://doi.org/10.1063/1.5054056 149, 224501 © 2018 Author(s). THE JOURNAL OF CHEMICAL PHYSICS 149, 224501 (2018) Calculation of the water-octanol partition coefficient of cholesterol for SPC, TIP3P, and TIP4P water Jorge R. Espinosa,1 Charlie R. Wand,2,3 Carlos Vega,1 Eduardo Sanz,1 and Daan Frenkel2 1Departamento de Quimica Fisica, Facultad de Ciencias Quimicas, Universidad Complutense de Madrid, 28040 Madrid, Spain 2Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom 3School of Chemical Engineering and Analytical Science, University of Manchester, Manchester M13 9PL, United Kingdom (Received 29 August 2018; accepted 13 November 2018; published online 11 December 2018) We present a numerical study of the relative solubility of cholesterol in octanol and water. -
CH. 9 Electrolyte Solutions
CH. 9 Electrolyte Solutions 9.1 Activity Coefficient of a Nonvolatile Solute in Solution and Osmotic Coefficient for the Solvent As shown in Ch. 6, the chemical potential is 0 where i is the chemical potential in the standard state and is a measure of concentration. For a nonvolatile solute, its pure liquid is often not a convenient standard state because a pure nonvolatile solute cannot exist as a liquid. For the dissolved solute, * i is the chemical potential of i in a hypothetical ideal solution at unit concentration (i = 1). In the ideal solution i = 1 for all compositions In real solution, i 1 as i 0 A common misconception: The standard state for the solute is the solute at infinite dilution. () At infinite dilution, the chemical potential of the solute approaches . Thus, the standard state should be at some non-zero concentration. A standard state need not be physically realizable, but it must be well- defined. For convenience, unit concentration i = 1 is used as the standard state. Three composition scales: Molarity (moles of solute per liter of solution, ci) The standard state of the solute is a hypothetical ideal 1-molar solution of i. (c) In real solution, i 1 as ci 0 Molality (moles of solute per kg of solvent, mi) // commonly used for electrolytes // density of solution not needed The standard state is hypothetical ideal 1-molal solution of i. (m) In real solution, i 1 as mi 0 Mole fraction xi Molality is an inconvenient scale for concentrated solution, and the mole fraction is a more convenient scale. -
From Hydrophobic to Hydrophilic Behaviour: a Simulation Study of Solvation Entropy and Free Energy of Simple Solutes R
From hydrophobic to hydrophilic behaviour: A simulation study of solvation entropy and free energy of simple solutes R. M. Lynden-Bell Atomistic Simulation Group and Irish Centre for Colloid Science, School of Mathematics and Physics, The Queen’s University, Belfast BT7 1NN, United Kingdom J. C. Rasaiah Department of Chemistry, University of Maine, Orono, Maine 04469 ~Received 14 April 1997; accepted 30 April 1997! We describe atomistic simulations of the free energy and entropy of hydration of ions in aqueous solution at 25 °C using a simple point charge model ~SPC/E! for water and charged spherical Lennard-Jones solutes. We use a novel method with an extended Lagrangian or Hamiltonian in which the charge and the size of the ions are considered as dynamical variables. This enables us to determine thermodynamic properties as continuous functions of solute size and charge and to move smoothly from hydrophilic to hydrophobic solvation conditions. On passing between these extremes, the entropy of solvation goes through maxima. For example it shows a double maximum as a function of charge at constant size and a single maximum as a function of size at constant ~non-zero! charge. These maxima correspond to extremes of structure-breaking and are associated with the disappearance of the second solvation shell in the radial distribution function; no anomalies are seen in the first shell. We also present direct evidence of the asymmetry in the free energy, enthalpy and entropy of hydration of ions on charge inversion arising from the asymmetry in the charge distribution in a water molecule. Our calculation only includes local contributions to the thermodynamic functions, but once finite size corrections are applied, the results are in reasonable agreement with experiment. -
Calculation of the Free Energy of Solvation from Molecular Dynamics Simulations*
Pure Appl. Chem., Vol. 76, No. 1, pp. 231–240, 2004. © 2004 IUPAC Calculation of the free energy of solvation from molecular dynamics simulations* Paulo F. B. Gonçalves and Hubert Stassen‡ Grupo de Química Teórica, Instituto de Química, Universidade Federal do Rio Grande do Sul, 91540-000 Porto Alegre-RS, Brazil Abstract: Molecular dynamics simulation has been employed in the computation of the free energy of solvation for a large number of solute molecules with different chemical function- alities in the solvents water, acetonitril, dimethyl sulfoxide, tetrahydrofuran, and carbon disulfide. The free solvation energy has been separated into three contributions: the work necessary to create a cavity around the solute in the solvent, the electrostatic contribution, and the free energy containing the short-range interactions between solute and solvent mol- ecules. The cavitational contribution was computed from the Claverie–Pierotti model applied to excluded volumes obtained from nearest-neighbor solute–solvent configurations treating the solvent molecules as spherical. The electrostatic term was calculated from a dielectric continuum approach with explicitly incorporating the solvent’s partial charges. The short- range contribution to the free solvation energy was obtained from the force field employed in the simulations. For solutions with available experimental data for the free energy of sol- vation, we found a satisfactory agreement of the computed free solvation energies and the ex- perimental data set. INTRODUCTION ∆ The free energy of solvation Gsolv represents a very important property for the thermodynamical de- scription of a solution with impact in the chemical, biological, and pharmaceutical sciences. From the ∆ theoretical point of view, several approaches have been developed to predict Gsolv.