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Bacterial Cell Membrane
BACTERIAL CELL MEMBRANE Dr. Rakesh Sharda Department of Veterinary Microbiology NDVSU College of Veterinary Sc. & A.H., MHOW CYTOPLASMIC MEMBRANE ➢The cytoplasmic membrane, also called a cell membrane or plasma membrane, is about 7 nanometers (nm; 1/1,000,000,000 m) thick. ➢It lies internal to the cell wall and encloses the cytoplasm of the bacterium. ➢It is the most dynamic structure of a prokaryotic cell. Structure of cell membrane ➢The structure of bacterial plasma membrane is that of unit membrane, i.e., a fluid phospholipid bilayer, composed of phospholipids (40%) and peripheral and integral proteins (60%) molecules. ➢The phospholipids of bacterial cell membranes do not contain sterols as in eukaryotes, but instead consist of saturated or monounsaturated fatty acids (rarely, polyunsaturated fatty acids). ➢Many bacteria contain sterol-like molecules called hopanoids. ➢The hopanoids most likely stabilize the bacterial cytoplasmic membrane. ➢The phospholipids are amphoteric molecules with a polar hydrophilic glycerol "head" attached via an ester bond to two non-polar hydrophobic fatty acid tails. ➢The phospholipid bilayer is arranged such that the polar ends of the molecules form the outermost and innermost surface of the membrane while the non-polar ends form the center of the membrane Fluid mosaic model ➢The plasma membrane contains proteins, sugars, and other lipids in addition to the phospholipids. ➢The model that describes the arrangement of these substances in lipid bilayer is called the fluid mosaic model ➢Dispersed within the bilayer are various structural and enzymatic proteins, which carry out most membrane functions. ➢Some membrane proteins are located and function on one side or another of the membrane (peripheral proteins). -
Hydrogen Isotope Fractionation in Lipids of the Methane-Oxidizing Bacterium Methylococcus Capsulatus
Geochimica et Cosmochimica Acta, Vol. 66, No. 22, pp. 3955–3969, 2002 Copyright © 2002 Elsevier Science Ltd Pergamon Printed in the USA. All rights reserved 0016-7037/02 $22.00 ϩ .00 PII S0016-7037(02)00981-X Hydrogen isotope fractionation in lipids of the methane-oxidizing bacterium Methylococcus capsulatus 1, 2 3 1 ALEX L. SESSIONS, *LINDA L. JAHNKE, ARNDT SCHIMMELMANN, and JOHN M. HAYES 1Department of Geology and Geophysics, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA 2Exobiology Branch, NASA-Ames Research Center, Moffett Field, CA 94035, USA 3Biogeochemical Laboratories, Department of Geological Sciences, Indiana University, Bloomington, IN 47405, USA (Received December 10, 2001; accepted in revised form June 7, 2002) Abstract—Hydrogen isotopic compositions of individual lipids from Methylococcus capsulatus, an aerobic, methane-oxidizing bacterium, were analyzed by hydrogen isotope-ratio-monitoring gas chromatography–mass spectrometry (GC-MS). The purposes of the study were to measure isotopic fractionation factors between methane, water, and lipids and to examine the biochemical processes that determine the hydrogen isotopic composition of lipids. M. capsulatus was grown in six replicate cultures in which the ␦D values of methane and water were varied independently. Measurement of concomitant changes in ␦D values of lipids allowed estimation of the proportion of hydrogen derived from each source and the isotopic fractionation associated with the utilization of each source. All lipids examined, including fatty acids, sterols, and hopanols, derived 31.4 Ϯ 1.7% of their hydrogen from methane. This was apparently true whether the cultures were harvested during exponential or stationary phase. Examination of the relevant biochemical pathways indicates that no hydrogen is transferred directly (with C-H bonds intact) from methane to lipids. -
A Distinct Pathway for Tetrahymanol Synthesis in Bacteria
A distinct pathway for tetrahymanol synthesis in bacteria Amy B. Banta1, Jeremy H. Wei1, and Paula V. Welander2 Department of Earth System Science, Stanford University, Stanford, CA 94305 Edited by John M. Hayes, Woods Hole Oceanographic Institution, Berkeley, CA, and approved September 25, 2015 (received for review June 11, 2015) Tetrahymanol is a polycyclic triterpenoid lipid first discovered in the physiological role of tetrahymanol in bacteria is unknown. Recent ciliate Tetrahymena pyriformis whose potential diagenetic product, studies have highlighted increased tetrahymanol production in gammacerane, is often used as a biomarker for water column strat- R. palustris TIE-1 under certain physiological conditions (e.g., ification in ancient ecosystems. Bacteria are also a potential source photoautotrophic growth) and also when cellular hopanoid lipid of tetrahymanol, but neither the distribution of this lipid in extant profiles are altered in gene deletion mutants (22, 23), but the bacteria nor the significance of bacterial tetrahymanol synthesis for physiological significance of these changes is not known. Further, interpreting gammacerane biosignatures is known. Here we couple the biochemical mechanism of tetrahymanol synthesis in bacteria comparative genomics with genetic and lipid analyses to link a pro- is unclear. In ciliates, squalene-tetrahymanol cyclase (Stc) cata- tein of unknown function to tetrahymanol synthesis in bacteria. This tetrahymanol synthase (Ths) is found in a variety of bacterial lyzes the cyclization of squalene directly to tetrahymanol (24), but genomes, including aerobic methanotrophs, nitrite-oxidizers, and neither of the two known bacterial tetrahymanol producers harbor sulfate-reducers, and in a subset of aquatic and terrestrial metage- a copy of Stc (10, 24). -
7Th International Conference on Countercurrent Chromatography, Hangzhou, August 6-8, 2012 Program
010 7th international conference on countercurrent chromatography, Hangzhou, August 6-8, 2012 Program January, August 6, 2012 8:30 – 9:00 Registration 9:00 – 9:10 Opening CCC 2012 Chairman: Prof. Qizhen Du 9:10 – 9:20 Welcome speech from the director of Zhejiang Gongshang University Session 1 – CCC Keynotes Chirman: Prof. Guoan Luo pH-zone-refining countercurrent chromatography : USA 09:20-09:50 Ito, Y. Origin, mechanism, procedure and applications K-1 Sutherland, I.*; Hewitson. P.; Scalable technology for the extraction of UK 09:50-10:20 Janaway, L.; Wood, P; pharmaceuticals (STEP): Outcomes from a year Ignatova, S. collaborative researchprogramme K-2 10:20-11:00 Tea Break with Poster & Exhibition session 1 France 11:00-11:30 Berthod, A. Terminology for countercurrent chromatography K-3 API recovery from pharmaceutical waste streams by high performance countercurrent UK 11:30-12:00 Ignatova, S.*; Sutherland, I. chromatography and intermittent countercurrent K-4 extraction 12:00-13:30 Lunch break 7th international conference on countercurrent chromatography, Hangzhou, August 6-8, 2012 January, August 6, 2012 Session 2 – CCC Instrumentation I Chirman: Prof. Ian Sutherland Pro, S.; Burdick, T.; Pro, L.; Friedl, W.; Novak, N.; Qiu, A new generation of countercurrent separation USA 13:30-14:00 F.; McAlpine, J.B., J. Brent technology O-1 Friesen, J.B.; Pauli, G.F.* Berthod, A.*; Faure, K.; A small volume hydrostatic CCC column for France 14:00-14:20 Meucci, J.; Mekaoui, N. full and quick solvent selection O-2 Construction of a HSCCC apparatus with Du, Q.B.; Jiang, H.; Yin, J.; column capacity of 12 or 15 liters and its China Xu, Y.; Du, W.; Li, B.; Du, application as flash countercurrent 14:20-14:40 O-3 Q.* chromatography in quick preparation of (-)-epicatechin 14:40-15:30 Tea Break with Poster & Exhibition session 2 Session 3 – CCC Instrumentation II Chirman: Prof. -
First Genomic Insights Into Members of a Candidate Bacterial Phylum Responsible for Wastewater Bulking
First genomic insights into members of a candidate bacterial phylum responsible for wastewater bulking Yuji Sekiguchi1, Akiko Ohashi1, Donovan H. Parks2, Toshihiro Yamauchi3, Gene W. Tyson2,4 and Philip Hugenholtz2,5 1 Biomedical Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan 2 Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland, St. Lucia, Queensland, Australia 3 Administrative Management Department, Kubota Kasui Corporation, Minato-ku, Tokyo, Japan 4 Advanced Water Management Centre, The University of Queensland, St. Lucia, Queensland, Australia 5 Institute for Molecular Bioscience, The University of Queensland, St. Lucia, Queensland, Australia ABSTRACT Filamentous cells belonging to the candidate bacterial phylum KSB3 were previously identified as the causative agent of fatal filament overgrowth (bulking) in a high-rate industrial anaerobic wastewater treatment bioreactor. Here, we obtained near complete genomes from two KSB3 populations in the bioreactor, including the dominant bulking filament, using diVerential coverage binning of metagenomic data. Fluorescence in situ hybridization with 16S rRNA-targeted probes specific for the two populations confirmed that both are filamentous organisms. Genome-based metabolic reconstruction and microscopic observation of the KSB3 filaments in the presence of sugar gradients indicate that both filament types are Gram-negative, strictly anaerobic fermenters capable of -
Understanding and Managing the Transition Using Essential Oils Vs
MENOPAUSE: UNDERSTANDING AND MANAGING THE TRANSITION USING ESSENTIAL OILS VS. TRADITIONAL ALLOPATHIC MEDICINE by Melissa A. Clanton A thesis submitted in partial fulfillment of the requirements for the Diploma of Aromatherapy 401 Australasian College of Health Sciences Instructors: Dorene Petersen, Erica Petersen, E. Joy Bowles, Marcangelo Puccio, Janet Bennion, Judika Illes, and Julie Gatti TABLE OF CONTENTS List of Tables and Figures............................................................................ iv Acknowledgments........................................................................................ v Introduction.................................................................................................. 1 Chapter 1 – Female Reproduction 1a – The Female Reproductive System............................................. 4 1b - The Female Hormones.............................................................. 9 1c – The Menstrual Cycle and Pregnancy....................................... 12 Chapter 2 – Physiology of Menopause 2a – What is Menopause? .............................................................. 16 2b - Physiological Changes of Menopause ..................................... 20 2c – Symptoms of Menopause ....................................................... 23 Chapter 3 – Allopathic Approaches To Menopausal Symptoms 3a –Diagnosis and Common Medical Treatments........................... 27 3b – Side Effects and Risks of Hormone Replacement Therapy ...... 32 3c – Retail Cost of Common Hormone Replacement -
Biosynthesis of Natural Products
63 2. Biosynthesis of Natural Products - Terpene Biosynthesis 2.1 Introduction Terpenes are a large and varied class of natural products, produced primarily by a wide variety of plants, insects, microoroganisms and animals. They are the major components of resin, and of turpentine produced from resin. The name "terpene" is derived from the word "turpentine". Terpenes are major biosynthetic building blocks within nearly every living creature. Steroids, for example, are derivatives of the triterpene squalene. When terpenes are modified, such as by oxidation or rearrangement of the carbon skeleton, the resulting compounds are generally referred to as terpenoids. Some authors will use the term terpene to include all terpenoids. Terpenoids are also known as Isoprenoids. Terpenes and terpenoids are the primary constituents of the essential oils of many types of plants and flowers. Essential oils are used widely as natural flavor additives for food, as fragrances in perfumery, and in traditional and alternative medicines such as aromatherapy. Synthetic variations and derivatives of natural terpenes and terpenoids also greatly expand the variety of aromas used in perfumery and flavors used in food additives. Recent estimates suggest that over 30'000 different terpenes have been characterized from natural sources. Early on it was recognized that the majority of terpenoid natural products contain a multiple of 5C-atoms. Hemiterpenes consist of a single isoprene unit, whereas the monoterpenes include e.g.: Monoterpenes CH2OH CHO CH2OH OH Myrcens -
Biosynthesis of New Alpha-Bisabolol Derivatives Through a Synthetic Biology Approach Arthur Sarrade-Loucheur
Biosynthesis of new alpha-bisabolol derivatives through a synthetic biology approach Arthur Sarrade-Loucheur To cite this version: Arthur Sarrade-Loucheur. Biosynthesis of new alpha-bisabolol derivatives through a synthetic biology approach. Biochemistry, Molecular Biology. INSA de Toulouse, 2020. English. NNT : 2020ISAT0003. tel-02976811 HAL Id: tel-02976811 https://tel.archives-ouvertes.fr/tel-02976811 Submitted on 23 Oct 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. THÈSE En vue de l’obtention du DOCTORAT DE L’UNIVERSITÉ DE TOULOUSE Délivré par l'Institut National des Sciences Appliquées de Toulouse Présentée et soutenue par Arthur SARRADE-LOUCHEUR Le 30 juin 2020 Biosynthèse de nouveaux dérivés de l'α-bisabolol par une approche de biologie synthèse Ecole doctorale : SEVAB - Sciences Ecologiques, Vétérinaires, Agronomiques et Bioingenieries Spécialité : Ingénieries microbienne et enzymatique Unité de recherche : TBI - Toulouse Biotechnology Institute, Bio & Chemical Engineering Thèse dirigée par Gilles TRUAN et Magali REMAUD-SIMEON Jury -
Sterols and Triterpenes: Antiviral Potential Supported by In-Silico Analysis
plants Review Sterols and Triterpenes: Antiviral Potential Supported by In-Silico Analysis Nourhan Hisham Shady 1,†, Khayrya A. Youssif 2,†, Ahmed M. Sayed 3 , Lassaad Belbahri 4 , Tomasz Oszako 5 , Hossam M. Hassan 3,6 and Usama Ramadan Abdelmohsen 1,7,* 1 Department of Pharmacognosy, Faculty of Pharmacy, Deraya University, Universities Zone, P.O. Box 61111, New Minia City, Minia 61519, Egypt; [email protected] 2 Department of Pharmacognosy, Faculty of Pharmacy, Modern University for Technology and Information, Cairo 11865, Egypt; [email protected] 3 Department of Pharmacognosy, Faculty of Pharmacy, Nahda University, Beni-Suef 62513, Egypt; [email protected] (A.M.S.); [email protected] (H.M.H.) 4 Laboratory of Soil Biology, University of Neuchatel, 2000 Neuchatel, Switzerland; [email protected] 5 Departement of Forest Protection, Forest Research Institute, 05-090 S˛ekocinStary, Poland; [email protected] 6 Department of Pharmacognosy, Faculty of Pharmacy, Beni-Suef University, Beni-Suef 62514, Egypt 7 Department of Pharmacognosy, Faculty of Pharmacy, Minia University, Minia 61519, Egypt * Correspondence: [email protected]; Tel.: +2-86-2347759 † Equal contribution. Abstract: The acute respiratory syndrome caused by the novel coronavirus (SARS-CoV-2) caused severe panic all over the world. The coronavirus (COVID-19) outbreak has already brought massive human suffering and major economic disruption and unfortunately, there is no specific treatment for COVID-19 so far. Herbal medicines and purified natural products can provide a rich resource for novel antiviral drugs. Therefore, in this review, we focused on the sterols and triterpenes as potential candidates derived from natural sources with well-reported in vitro efficacy against numerous types of viruses. -
Use the Right Citrus-Based Cleaning Products to Avoid Corrosion Or Rust Bob Beckley, Project Leader
United States Department of Agriculture Facilities Forest Service Technology & Development Program March 2006 0673–2319–MTDC 7300/7100/5100/2400/2300 Use the Right Citrus-Based Cleaning Products to Avoid Corrosion or Rust Bob Beckley, Project Leader itrus-based cleaning products are commonly found in metal on their chain saws. The crew stopped using citrus-based residential and commercial settings. The ingredients in products because they believed citric acid was causing the these products vary widely (figure 1). While some of damage. However, the damage probably was caused by a C water-based citrus cleaning product. What To Look for in a Citrus-Based Cleaning Product The Material Safety Data Sheets (MSDSs) for chemical products list their ingredients. The MSDS for a citrus-based cleaner should list D-Limonene among the ingredients. D- Limonene is in the terpene family, which includes citrus and pine oils. Terpenes are generally not corrosive or harmful to metals or most plastics and polymers. Terpenes won’t cause rusting, pitting, etching, or staining. Citrus-based terpenes can dissolve heavy petroleum greases and residues in about 30 Figure 1—Citrus-based cleaners are commonly used in residential and minutes when they are used at ambient temperatures. commercial settings, but users often are unaware of the difference between citrus oil-based cleaning products and water-based products. A citrus oil-based cleaning product will not cause corrosion these products can cause corrosion or rust, others do not. The or rust. Such products are made from the oil found in the difference is based on the ingredients. Hundreds of cleaning orange peel, rather than the pulp and juice of the orange. -
The Myxocoumarins a and B from Stigmatella Aurantiaca Strain MYX-030
The myxocoumarins A and B from Stigmatella aurantiaca strain MYX-030 Tobias A. M. Gulder*1, Snežana Neff2, Traugott Schüz2, Tammo Winkler2, René Gees2 and Bettina Böhlendorf*2 Full Research Paper Open Access Address: Beilstein J. Org. Chem. 2013, 9, 2579–2585. 1Kekulé Institute of Organic Chemistry and Biochemistry, University of doi:10.3762/bjoc.9.293 Bonn, Gerhard-Domagk-Straβe 1, 53121 Bonn, Germany and 2Syngenta Crop Protection AG, CH-4002 Basel, Switzerland Received: 21 August 2013 Accepted: 01 November 2013 Email: Published: 20 November 2013 Tobias A. M. Gulder* - [email protected]; Bettina Böhlendorf* - [email protected] This article is part of the Thematic Series "Natural products in synthesis and biosynthesis" and is dedicated to Prof. Dr. Gerhard Höfle on the * Corresponding author occasion of his 74th birthday. Keywords: Guest Editor: J. S. Dickschat antifungal activity; myxobacteria; natural products; Stigmatella aurantiaca; structure elucidation © 2013 Gulder et al; licensee Beilstein-Institut. License and terms: see end of document. Abstract The myxobacterial strain Stigmatella aurantiaca MYX-030 was selected as promising source for the discovery of new biologically active natural products by our screening methodology. The isolation, structure elucidation and initial biological evaluation of the myxocoumarins derived from this strain are described in this work. These compounds comprise an unusual structural framework and exhibit remarkable antifungal properties. Introduction Despite declining interest of most big R&D-driven chemical epothilones A (1), Figure 1), microtubule-stabilizing macrolac- companies in recent years, natural products continue to serve as tones that are clinically used in cancer therapy [16-20]. one of the most important sources of new bioactive chemical entities, both in the pharmaceutical [1-4] as well as in the agro- But also from an agrochemical point of view, myxobacteria chemical industry [5-8]. -
DIFFERENCES in Terpenoid Levels Between Plant Species Are Known To
GENETICS OF TEP.PENES I. GENE CONTROL OF MONOTERPENE LEVELS IN PINUS MONTICOLA DOUGL. JAMES W. HANOVER Geneticist, Forestry Sciences Laboratory, lntermountain Forest and Range Experiment Station, U.S. Department of Agriculture, Moscow, Idaho * Receivedi o.v.6 1.INTRODUCTION DIFFERENCESin terpenoid levels between plant species are known to exist but little is known about their genetic bases. The terpenes have been used extensively in biochemical systematic studies in Pinus (Mirov, 1958, 1961; Williams and Bannister, 1962; Forde, 1964), Eucalyptus (Baker and Smith, 1920; Penfold and Morrison, 1927), Cup ressacee (Erdtman, 1958),andmany other plant families and genera (Alston and Turner, 1963).Thesestudies were usually based upon the assumption that variation within a species is relatively small. Although this may be valid in some cases, Bannister et al. (1962)andothers have shown that the level of terpenes can vary with geographic origin within a species. Recent data on tree-to-tree variability in the monoterpenes of Pinus ponderosa Laws. show that such variation can be relatively large (Smith, 1964). Results of similar work in our laboratory with western white pine (Pinus monticola Dougi.) also revealed substantial qualitative and quantitative variation in the cortex monoterpenes between trees. In order to provide a basis for the use of terpenes for comparative biochemical studies, an understanding of both their variability and mode of inheritance is essential. The objective of the present study is to demonstrate the degree to which levels of six monoterpene compounds are gene-controlled in western white pine. Interrelations among the terpenes and between terpenes and growth are also considered, 2.MATERIALS AND METHODS Thematerials for this study are of three types: (i) parents—as clonal lines of grafts, () F1 progeny from crosses between the ortets (parents) represented by the clones, and () S1 progeny of the parent trees.