Fungal Cannons: Explosive Spore Discharge in the Ascomycota Frances Trail
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Development and Evaluation of Rrna Targeted in Situ Probes and Phylogenetic Relationships of Freshwater Fungi
Development and evaluation of rRNA targeted in situ probes and phylogenetic relationships of freshwater fungi vorgelegt von Diplom-Biologin Christiane Baschien aus Berlin Von der Fakultät III - Prozesswissenschaften der Technischen Universität Berlin zur Erlangung des akademischen Grades Doktorin der Naturwissenschaften - Dr. rer. nat. - genehmigte Dissertation Promotionsausschuss: Vorsitzender: Prof. Dr. sc. techn. Lutz-Günter Fleischer Berichter: Prof. Dr. rer. nat. Ulrich Szewzyk Berichter: Prof. Dr. rer. nat. Felix Bärlocher Berichter: Dr. habil. Werner Manz Tag der wissenschaftlichen Aussprache: 19.05.2003 Berlin 2003 D83 Table of contents INTRODUCTION ..................................................................................................................................... 1 MATERIAL AND METHODS .................................................................................................................. 8 1. Used organisms ............................................................................................................................. 8 2. Media, culture conditions, maintenance of cultures and harvest procedure.................................. 9 2.1. Culture media........................................................................................................................... 9 2.2. Culture conditions .................................................................................................................. 10 2.3. Maintenance of cultures.........................................................................................................10 -
Peziza and Pezizaceae Inferred from Multiple Nuclear Genes: RPB2, -Tubulin, and LSU Rdna
Molecular Phylogenetics and Evolution 36 (2005) 1–23 www.elsevier.com/locate/ympev Evolutionary relationships of the cup-fungus genus Peziza and Pezizaceae inferred from multiple nuclear genes: RPB2, -tubulin, and LSU rDNA Karen Hansen ¤, Katherine F. LoBuglio, Donald H. PWster Harvard University Herbaria, Cambridge, MA 02138, USA Received 5 May 2004; revised 17 December 2004 Available online 22 April 2005 Abstract To provide a robust phylogeny of Pezizaceae, partial sequences from two nuclear protein-coding genes, RPB2 (encoding the sec- ond largest subunit of RNA polymerase II) and -tubulin, were obtained from 69 and 72 specimens, respectively, to analyze with nuclear ribosomal large subunit RNA gene sequences (LSU). The three-gene data set includes 32 species of Peziza, and 27 species from nine additional epigeous and six hypogeous (truZe) pezizaceous genera. Analyses of the combined LSU, RPB2, and -tubulin data set using parsimony, maximum likelihood, and Bayesian approaches identify 14 Wne-scale lineages within Pezizaceae. Species of Peziza occur in eight of the lineages, spread among other genera of the family, conWrming the non-monophyly of the genus. Although parsimony analyses of the three-gene data set produced a nearly completely resolved strict consensus tree, with increased conWdence, relationships between the lineages are still resolved with mostly weak bootstrap support. Bayesian analyses of the three- gene data, however, show support for several more inclusive clades, mostly congruent with Bayesian analyses of RPB2. No strongly supported incongruence was found among phylogenies derived from the separate LSU, RPB2, and -tubulin data sets. The RPB2 region appeared to be the most informative single gene region based on resolution and clade support, and accounts for the greatest number of potentially parsimony informative characters within the combined data set, followed by the LSU and the -tubulin region. -
Phaeoseptaceae, Pleosporales) from China
Mycosphere 10(1): 757–775 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/17 Morphological and phylogenetic studies of Pleopunctum gen. nov. (Phaeoseptaceae, Pleosporales) from China Liu NG1,2,3,4,5, Hyde KD4,5, Bhat DJ6, Jumpathong J3 and Liu JK1*,2 1 School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, P.R. China 2 Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang 550006, P.R. China 3 Faculty of Agriculture, Natural Resources and Environment, Naresuan University, Phitsanulok 65000, Thailand 4 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 5 Mushroom Research Foundation, Chiang Rai 57100, Thailand 6 No. 128/1-J, Azad Housing Society, Curca, P.O., Goa Velha 403108, India Liu NG, Hyde KD, Bhat DJ, Jumpathong J, Liu JK 2019 – Morphological and phylogenetic studies of Pleopunctum gen. nov. (Phaeoseptaceae, Pleosporales) from China. Mycosphere 10(1), 757–775, Doi 10.5943/mycosphere/10/1/17 Abstract A new hyphomycete genus, Pleopunctum, is introduced to accommodate two new species, P. ellipsoideum sp. nov. (type species) and P. pseudoellipsoideum sp. nov., collected from decaying wood in Guizhou Province, China. The genus is characterized by macronematous, mononematous conidiophores, monoblastic conidiogenous cells and muriform, oval to ellipsoidal conidia often with a hyaline, elliptical to globose basal cell. Phylogenetic analyses of combined LSU, SSU, ITS and TEF1α sequence data of 55 taxa were carried out to infer their phylogenetic relationships. The new taxa formed a well-supported subclade in the family Phaeoseptaceae and basal to Lignosphaeria and Thyridaria macrostomoides. -
Phylogenetic Investigations of Sordariaceae Based on Multiple Gene Sequences and Morphology
mycological research 110 (2006) 137– 150 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres Phylogenetic investigations of Sordariaceae based on multiple gene sequences and morphology Lei CAI*, Rajesh JEEWON, Kevin D. HYDE Centre for Research in Fungal Diversity, Department of Ecology & Biodiversity, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, PR China article info abstract Article history: The family Sordariaceae incorporates a number of fungi that are excellent model organisms Received 10 May 2005 for various biological, biochemical, ecological, genetic and evolutionary studies. To deter- Received in revised form mine the evolutionary relationships within this group and their respective phylogenetic 19 August 2005 placements, multiple-gene sequences (partial nuclear 28S ribosomal DNA, nuclear ITS ribo- Accepted 29 September 2005 somal DNA and partial nuclear b-tubulin) were analysed using maximum parsimony and Corresponding Editor: H. Thorsten Bayesian analyses. Analyses of different gene datasets were performed individually and Lumbsch then combined to generate phylogenies. We report that Sordariaceae, with the exclusion Apodus and Diplogelasinospora, is a monophyletic group. Apodus and Diplogelasinospora are Keywords: related to Lasiosphaeriaceae. Multiple gene analyses suggest that the spore sheath is not Ascomycota a phylogenetically significant character to segregate Asordaria from Sordaria. Smooth- Gelasinospora spored Sordaria species (including so-called Asordaria species) constitute a natural group. Neurospora Asordaria is therefore congeneric with Sordaria. Anixiella species nested among Gelasinospora Sordaria species, providing further evidence that non-ostiolate ascomata have evolved from ostio- late ascomata on several independent occasions. This study agrees with previous studies that show heterothallic Neurospora species to be monophyletic, but that homothallic ones may have a multiple origins. -
Classifications of Fungi
Chapter 24 | Fungi 675 Sexual Reproduction Sexual reproduction introduces genetic variation into a population of fungi. In fungi, sexual reproduction often occurs in response to adverse environmental conditions. During sexual reproduction, two mating types are produced. When both mating types are present in the same mycelium, it is called homothallic, or self-fertile. Heterothallic mycelia require two different, but compatible, mycelia to reproduce sexually. Although there are many variations in fungal sexual reproduction, all include the following three stages (Figure 24.8). First, during plasmogamy (literally, “marriage or union of cytoplasm”), two haploid cells fuse, leading to a dikaryotic stage where two haploid nuclei coexist in a single cell. During karyogamy (“nuclear marriage”), the haploid nuclei fuse to form a diploid zygote nucleus. Finally, meiosis takes place in the gametangia (singular, gametangium) organs, in which gametes of different mating types are generated. At this stage, spores are disseminated into the environment. Review the characteristics of fungi by visiting this interactive site (http://openstaxcollege.org/l/ fungi_kingdom) from Wisconsin-online. 24.2 | Classifications of Fungi By the end of this section, you will be able to do the following: • Identify fungi and place them into the five major phyla according to current classification • Describe each phylum in terms of major representative species and patterns of reproduction The kingdom Fungi contains five major phyla that were established according to their mode of sexual reproduction or using molecular data. Polyphyletic, unrelated fungi that reproduce without a sexual cycle, were once placed for convenience in a sixth group, the Deuteromycota, called a “form phylum,” because superficially they appeared to be similar. -
Self-Fertility and Uni-Directional Mating-Type Switching in Ceratocystis Coerulescens, a Filamentous Ascomycete
Curr Genet (1997) 32: 52–59 © Springer-Verlag 1997 ORIGINAL PAPER T. C. Harrington · D. L. McNew Self-fertility and uni-directional mating-type switching in Ceratocystis coerulescens, a filamentous ascomycete Received: 6 July 1996 / 25 March 1997 Abstract Individual perithecia from selfings of most some filamentous ascomycetes. Although a switch in the Ceratocystis species produce both self-fertile and self- expression of mating-type is seen in these fungi, it is not sterile progeny, apparently due to uni-directional mating- clear if a physical movement of mating-type genes is in- type switching. In C. coerulescens, male-only mutants of volved. It is also not clear if the expressed mating-types otherwise hermaphroditic and self-fertile strains were self- of the respective self-fertile and self-sterile progeny are sterile and were used in crossings to demonstrate that this homologs of the mating-type genes in other strictly heter- species has two mating-types. Only MAT-2 strains are othallic species of ascomycetes. capable of selfing, and half of the progeny from a MAT-2 Sclerotinia trifoliorum and Chromocrea spinulosa show selfing are MAT-1. Male-only, MAT-2 mutants are self- a 1:1 segregation of self-fertile and self-sterile progeny in sterile and cross only with MAT-1 strains. Similarly, self- perithecia from selfings or crosses (Mathieson 1952; Uhm fertile strains generally cross with only MAT-1 strains. and Fujii 1983a, b). In tetrad analyses of selfings or crosses, MAT-1 strains only cross with MAT-2 strains and never self. half of the ascospores in an ascus are large and give rise to It is hypothesized that the switch in mating-type during self-fertile colonies, and the other ascospores are small and selfing is associated with a deletion of the MAT-2 gene. -
Fusarium Graminearum ~4(Final)-1
MARCH 2016 Fusarium graminearum (Fusarium Head Blight ) T. Kelly Turkington1, Andrew Petran2, Tania Yonow3,4, and Darren J. Kriticos3,4 1 Lacombe Research Centre and Beaverlodge Research Farm, Agriculture and Agri‐Food Canada, Lacombe, Alberta, Canada 2 Department of Horticultural Sciences, University of Minnesota, St. Paul, MN, USA 3 HarvestChoice, InSTePP, University of Minnesota, St. Paul, MN, USA 4 CSIRO, Biosecurity and Agriculture Flagships, Canberra, Australia Background Information Introduction Common Names: Fusarium graminearum Schwabe [teleomorph Gibberella Fusarium head blight; FHB, head blight of maize zeae (Schweinitz) Petch], is of world‐wide importance on small grain cereals and corn, occurring under a wide Scientiic Name: range of soil and environmental conditions (CAB Fusarium graminearum (anamorph = asexual stage), International 2003; Gilchrist and Dubin 2002; Parry et al. Gibberella zeae (teleomorph = sexual stage) 1995; Stack 2003). Since the early 1990s, fusarium head blight (FHB) caused primarily by F. graminearum has Synonyms: become one of the most signiicant cereal diseases faced Botryosphaeria saubinetii, Dichomera saubinetii, by producers in central Canada and the prairie region, Dothidea zeae, Fusarium roseum, Gibbera saubinetii, and the midwestern United States (e.g., Gilbert and Gibberella roseum, Gibberella saubinetii, Sphaeria Tekauz 2000; McMullen et al. 1997b; Tekauz et al. 2000). saubinetii, Sphaeria zeae Fusarium graminearum was identiied by CIMMYT to be a Taxonomy: major limiting factor to wheat production in many parts Kingdom: Animalia; Phylum: Ascomycota; of the world (Stack 1999). The fungus can produce Class: Sordariomycetes; Order: Hypocreales; several mycotoxins, including deoxynivalenol (DON) and Family: Nectriaceae zearalenone. In non‐ruminants, feed contaminated with DON can reduce growth rates, while zearalenone can Crop Hosts: cause reproductive problems (Charmley et al. -
Reproductive Isolation: Evidence That Ascobolus Stercorarius and Ascobolus Furfuraceus Are Two Species, Not One
Fungal Genetics Reports Volume 51 Article 10 Reproductive Isolation: Evidence that Ascobolus stercorarius and Ascobolus furfuraceus are two species, not one G. N. Bistis Drew University Follow this and additional works at: https://newprairiepress.org/fgr This work is licensed under a Creative Commons Attribution-Share Alike 4.0 License. Recommended Citation Bistis, G. N. (2004) "Reproductive Isolation: Evidence that Ascobolus stercorarius and Ascobolus furfuraceus are two species, not one," Fungal Genetics Reports: Vol. 51, Article 10. https://doi.org/ 10.4148/1941-4765.1140 This Regular Paper is brought to you for free and open access by New Prairie Press. It has been accepted for inclusion in Fungal Genetics Reports by an authorized administrator of New Prairie Press. For more information, please contact [email protected]. Reproductive Isolation: Evidence that Ascobolus stercorarius and Ascobolus furfuraceus are two species, not one Abstract Strains obtained from the germination of 30-40 year old ascospores from seven stocks of the heterothallicAscobolus stercorarius - furfuraceous complex were mated in all combinations. All st X st and fu X fu pairings were fertile (ascospores) whereas all st X fu pairings were sterile (no ascospores). Based on this reproductive isolation between st and fu strains I conclude that the complex consists of two species. The block that segregated the two species is probably some stage in the establishment of the dikaryotic phase in ascogenous hyphae. One hypothesis is that this block is at the stage of nuclear recognition. This regular paper is available in Fungal Genetics Reports: https://newprairiepress.org/fgr/vol51/iss1/10 Bistis: Reproductive Isolation: Evidence that Ascobolus stercorarius and Number 51, 2004 23 Reproductive Isolation: Evidence that Ascobolus stercorarius and Ascobolus furfuraceus are two species, not one. -
Molecular Systematics of the Marine Dothideomycetes
available online at www.studiesinmycology.org StudieS in Mycology 64: 155–173. 2009. doi:10.3114/sim.2009.64.09 Molecular systematics of the marine Dothideomycetes S. Suetrong1, 2, C.L. Schoch3, J.W. Spatafora4, J. Kohlmeyer5, B. Volkmann-Kohlmeyer5, J. Sakayaroj2, S. Phongpaichit1, K. Tanaka6, K. Hirayama6 and E.B.G. Jones2* 1Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90112, Thailand; 2Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand; 3National Center for Biothechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.; 4Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, U.S.A.; 5Institute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, North Carolina 28557, U.S.A.; 6Faculty of Agriculture & Life Sciences, Hirosaki University, Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan *Correspondence: E.B. Gareth Jones, [email protected] Abstract: Phylogenetic analyses of four nuclear genes, namely the large and small subunits of the nuclear ribosomal RNA, transcription elongation factor 1-alpha and the second largest RNA polymerase II subunit, established that the ecological group of marine bitunicate ascomycetes has representatives in the orders Capnodiales, Hysteriales, Jahnulales, Mytilinidiales, Patellariales and Pleosporales. Most of the fungi sequenced were intertidal mangrove taxa and belong to members of 12 families in the Pleosporales: Aigialaceae, Didymellaceae, Leptosphaeriaceae, Lenthitheciaceae, Lophiostomataceae, Massarinaceae, Montagnulaceae, Morosphaeriaceae, Phaeosphaeriaceae, Pleosporaceae, Testudinaceae and Trematosphaeriaceae. Two new families are described: Aigialaceae and Morosphaeriaceae, and three new genera proposed: Halomassarina, Morosphaeria and Rimora. -
Studies of Coprophilous Ascomycetes in Kenya – Ascobolus Species from Wildlife Dung
Current Research in Environmental & Applied Mycology Doi 10.5943/cream/2/1/1 Studies of coprophilous ascomycetes in Kenya – Ascobolus species from wildlife dung Mungai PG1,2,3, Njogu JG3, Chukeatirote E1,2 and Hyde KD1,2* 1Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 2School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand 3Biodiversity Research and Monitoring Division, Kenya Wildlife Service, P.O. Box 40241 00100 Nairobi, Kenya Mungai PG, Njogu JG, Chukeatirote E, Hyde KD 2012 – Studies of coprophilous ascomycetes in Kenya – Ascobolus species from wildlife dung. Current Research in Environmental & Applied Mycology 2(1), 1-16, Doi 10.5943/cream/2/1/1 Species of coprophilous Ascobolus were examined in a study of coprophilous fungi in different habitats and wildlife dung types from National Parks in Kenya. Dung samples were collected in the field and returned to the laboratory where they were incubated in moist chamber culture. Coprophilous Ascobolus were isolated from giraffe, impala, common zebra, African elephant dung, Cape buffalo, dikdik, hippopotamus, black rhinoceros and waterbuck dung. Six species, Ascobolus amoenus, A. bistisii, A. calesco, A. immersus, A. nairobiensis and A. tsavoensis are identified and described. Ascobolus calesco, A. amoenus and A. bistisii were the most common. Two new species, Ascobolus nairobiensis and A. tsavoensis are introduced in this paper. In addition, two others, Ascobolus bistisii and A. calesco are new records in Kenya and are described and illustrated. The diversity of coprophilous Ascobolus from wildlife dung in Kenya as deduced from this study is very high. Key words – Ascobolus amoenus – A. -
A Taxonomic Study of the Coprophilous Ascomycetes Of
Eastern Illinois University The Keep Masters Theses Student Theses & Publications 1971 A Taxonomic Study of the Coprophilous Ascomycetes of Southeastern Illinois Alan Douglas Parker Eastern Illinois University This research is a product of the graduate program in Botany at Eastern Illinois University. Find out more about the program. Recommended Citation Parker, Alan Douglas, "A Taxonomic Study of the Coprophilous Ascomycetes of Southeastern Illinois" (1971). Masters Theses. 3958. https://thekeep.eiu.edu/theses/3958 This is brought to you for free and open access by the Student Theses & Publications at The Keep. It has been accepted for inclusion in Masters Theses by an authorized administrator of The Keep. For more information, please contact [email protected]. PA ER CERTIFICATE #2 f TO Graduate Degree Candidates who have written formal theses. SUBJECT: Permission to reproduce theses. Th' University Library is receiving a number of requests from other ins.litutions asking permission to reproduce dissertations for inclusion in their library holdings. Although no copyright laws are involved, we:feel that professional courtesy demands that permission be obtained frqm the author before we allow theses to be copied. Ple'ase sign one of the following statements. Bo9th Library of 'Eastern Illinois University has my permission to le�� my thesis to a reputable college or university for the purpose of copying it for inclusion in that institution's library or research hol�ings. Date Author I ��spectfully request Booth Library of Eastern Illinois University not al�pw my thesis be reproduced because � µ� 7 Date ILB1861.C57X P2381>C2/ A TAXONOMIC STUDY OF THE COPROPHILOUS ASCOMYCETES OF sou·rHEASTERN ILLINOIS (TITLE) BY ALAN DOUGLAS PARKER ...... -
Perithecial Ascomycetes from the 400 Million Year Old Rhynie Chert: an Example of Ancestral Polymorphism
Mycologia, 97(1), 2005, pp. 269±285. q 2005 by The Mycological Society of America, Lawrence, KS 66044-8897 Perithecial ascomycetes from the 400 million year old Rhynie chert: an example of ancestral polymorphism Editor's note: Unfortunately, the plates for this article published in the December 2004 issue of Mycologia 96(6):1403±1419 were misprinted. This contribution includes the description of a new genus and a new species. The name of a new taxon of fossil plants must be accompanied by an illustration or ®gure showing the essential characters (ICBN, Art. 38.1). This requirement was not met in the previous printing, and as a result we are publishing the entire paper again to correct the error. We apologize to the authors. T.N. Taylor1 terpreted as the anamorph of the fungus. Conidioge- Department of Ecology and Evolutionary Biology, and nesis is thallic, basipetal and probably of the holoar- Natural History Museum and Biodiversity Research thric-type; arthrospores are cube-shaped. Some peri- Center, University of Kansas, Lawrence, Kansas thecia contain mycoparasites in the form of hyphae 66045 and thick-walled spores of various sizes. The structure H. Hass and morphology of the fossil fungus is compared H. Kerp with modern ascomycetes that produce perithecial as- Forschungsstelle fuÈr PalaÈobotanik, Westfalische cocarps, and characters that de®ne the fungus are Wilhelms-UniversitaÈt MuÈnster, Germany considered in the context of ascomycete phylogeny. M. Krings Key words: anamorph, arthrospores, ascomycete, Bayerische Staatssammlung fuÈr PalaÈontologie und ascospores, conidia, fossil fungi, Lower Devonian, my- Geologie, Richard-Wagner-Straûe 10, 80333 MuÈnchen, coparasite, perithecium, Rhynie chert, teleomorph Germany R.T.