Email [email protected] Description Q9W0F6 Wed Feb 13 11:22:52 Date GMT 2013 Unique Job 87426d8098a05341 ID

Detailed template

information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

Fold:UDP-Glycosyltransferase/glycogen phosphorylase 1 d2nzwa1 Alignment 100.0 13 Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:FucT-like

PDB header: Chain: A: PDB Molecule:phosphatidylinositol mannosyltransferase (pima); 2 c2gejA_ 59.1 9 Alignment PDBTitle: crystal structure of phosphatidylinositol mannosyltransferase (pima)2 from mycobacterium smegmatis in complex with gdp-man

Fold:UDP-Glycosyltransferase/glycogen phosphorylase 3 d2f9fa1 Alignment 58.4 13 Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl group 1

PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; 4 c2r60A_ 58.4 18 Alignment PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii

Fold:Aminoacid dehydrogenase-like, N-terminal domain 5 d1o0sa2 Alignment 56.1 34 Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Malic N-domain

PDB header:transferase Chain: B: PDB Molecule:predicted glycosyltransferases; 6 c3c4vB_ Alignment 52.4 16 PDBTitle: structure of the retaining glycosyltransferase msha:the2 first step in mycothiol biosynthesis. organism:3 corynebacterium glutamicum : complex with udp and 1l-ins-1-4 p.

PDB header: Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; 7 c3dzcA_ 50.3 17 Alignment PDBTitle: 2.35 angstrom resolution structure of wecb (vc0917), a udp-n-2 acetylglucosamine 2-epimerase from vibrio cholerae.

PDB header:transferase Chain: H: PDB Molecule:glycosyl transferase, group 1 family 8 c2jjmH_ Alignment 44.5 9 protein; PDBTitle: crystal structure of a family gt4 glycosyltransferase from2 bacillus anthracis orf ba1558.

PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; 9 c3ot5D_ 44.3 20 Alignment PDBTitle: 2.2 angstrom resolution crystal structure of putative udp- n-2 acetylglucosamine 2-epimerase from listeria monocytogenes

Fold:UDP-Glycosyltransferase/glycogen phosphorylase 10 d2iw1a1 Alignment 41.3 7 Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1

PDB header:signaling protein Chain: F: PDB Molecule:rho guanine nucleotide exchange factor 11 c1shzF_ Alignment 40.1 26 1; PDBTitle: crystal structure of the p115rhogef rgrgs domain in a2 complex with galpha(13):galpha(i1) chimera PDB header:cell adhesion Chain: A: PDB Molecule:erythrocyte membrane protein, putative; 12 c3vuvA_ 39.6 11 Alignment PDBTitle: crystal structure of the merozoite surface protein mspdbl2 from p.2 falciparum bound to zinc

PDB header: Chain: F: PDB Molecule:guanidinobutyrase; 13 c3nioF_ 39.2 11 Alignment PDBTitle: crystal structure of pseudomonas aeruginosa guanidinobutyrase

PDB header:cell adhesion Chain: A: PDB Molecule:erythrocyte membrane protein, putative; 14 c3vuuA_ 38.7 12 Alignment PDBTitle: crystal structure of the merozoite surface protein mspdbl2 from p.2 falciparum

PDB header:membrane protein Chain: A: PDB Molecule:erythrocyte membrane protein 1 15 c2wauA_ 37.8 13 Alignment (pfemp1); PDBTitle: structure of dbl6 epsilon domain from var2csa

PDB header:membrane protein/signaling protein Chain: E: PDB Molecule:cardiac phospholamban; 16 c1zllE_ 36.5 26 Alignment PDBTitle: nmr structure of unphosphorylated human phospholamban2 pentamer

PDB header:transferase Chain: A: PDB Molecule:gdp-mannose-dependent alpha-(1-6)- 17 c3okaA_ Alignment 36.5 11 phosphatidylinositol PDBTitle: crystal structure of corynebacterium glutamicum pimb' in complex with2 gdp-man (triclinic crystal form)

PDB header:transferase Chain: B: PDB Molecule:type 1 capsular polysaccharide 18 c3qhpB_ Alignment 34.9 20 biosynthesis protein j PDBTitle: crystal structure of the catalytic domain of cholesterol- alpha-2 glucosyltransferase from helicobacter pylori

Fold:UDP-Glycosyltransferase/glycogen phosphorylase 19 d1f6da_ Alignment 34.8 16 Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDP-N-acetylglucosamine 2-epimerase

Fold:Cystatin-like 20 d1q42a_ Alignment 34.4 20 Superfamily:NTF2-like Family:NTF2-like

PDB header:transferase/rna Chain: A: PDB Molecule:trna isopentenyltransferase; 21 c3eplA_ Alignment not modelled 34.3 18 PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism Fold:Cystatin-like 22 d1of5b_ Alignment not modelled 33.4 40 Superfamily:NTF2-like Family:NTF2-like PDB header:dna binding protein Chain: I: PDB Molecule:dna-packaging protein gp3; 23 c3p9aI_ not modelled 33.3 41 Alignment PDBTitle: an atomic view of the nonameric small terminase subunit of2 bacteriophage p22 Fold:Aminoacid dehydrogenase-like, N-terminal domain 24 d1pj3a2 Alignment not modelled 28.4 18 Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Malic enzyme N-domain PDB header:hydrolase Chain: A: PDB Molecule:agmatine ; 25 c3pzlA_ not modelled 28.4 19 Alignment PDBTitle: the crystal structure of agmatine ureohydrolase of thermoplasma2 volcanium PDB header:isomerase Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; 26 c3beoA_ not modelled 27.5 11 Alignment PDBTitle: a structural basis for the of non-2 hydrolyzing udp-glcnac 2-epimerases Fold:Aminoacid dehydrogenase-like, N-terminal domain 27 d1gq2a2 Alignment not modelled 26.6 23 Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Malic enzyme N-domain

PDB header:membrane protein 28 c2y8dA_ Alignment not modelled 25.2 9 Chain: A: PDB Molecule:erythrocyte membrane protein 1; PDBTitle: structure of dbl6 epsilon domain from var2csa strain fcr3 Fold:Duffy binding domain-like 29 d1zroa1 Alignment not modelled 24.8 11 Superfamily:Duffy binding domain-like Family:Duffy binding domain PDB header:translation Chain: C: PDB Molecule:mrna transport regulator mtr2; 30 c1q40C_ not modelled 24.4 20 Alignment PDBTitle: crystal structure of the c. albicans mtr2-mex67 m domain complex Fold:Duffy binding domain-like 31 d1zroa2 Alignment not modelled 23.6 11 Superfamily:Duffy binding domain-like Family:Duffy binding domain

Fold:Acyl carrier protein-like 32 d1dv5a_ Alignment not modelled 21.5 17 Superfamily:ACP-like Family:apo-D-alanyl carrier protein PDB header:transferase Chain: C: PDB Molecule:3-deoxy-d-manno-2-octulosonic acid 33 c2xcuC_ Alignment not modelled 20.9 17 transferase; PDBTitle: membrane-embedded monofunctional glycosyltransferase waaa of aquifex2 aeolicus, comlex with cmp PDB header:transferase Chain: D: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of the full-length trna2 34 c3exaD_ not modelled 20.5 11 Alignment isopentenylpyrophosphate transferase (bh2366) from3 bacillus halodurans, northeast structural genomics4 consortium target bhr41. Fold:/deacetylase 35 d1woha_ Alignment not modelled 19.7 27 Superfamily:Arginase/deacetylase Family:Arginase-like amidino

PDB header: 36 c1qr6A_ Alignment not modelled 19.1 18 Chain: A: PDB Molecule:malic enzyme 2; PDBTitle: human mitochondrial nad(p)-dependent malic enzyme PDB header:hydrolase Chain: D: PDB Molecule:; 37 c4dz4D_ not modelled 19.0 14 Alignment PDBTitle: x-ray crystal structure of a hypothetical agmatinase from burkholderia2 thailandensis PDB header:transcription 38 c4fe4C_ Alignment not modelled 18.6 28 Chain: C: PDB Molecule:xylose operon regulatory protein; PDBTitle: crystal structure of apo e. coli xylr PDB header:hydrolase Chain: A: PDB Molecule:putative agmatinase; 39 c3lhlA_ not modelled 18.1 17 Alignment PDBTitle: crystal structure of a putative agmatinase from clostridium difficile PDB header:oxidoreductase 40 c2aw5A_ Alignment not modelled 16.8 18 Chain: A: PDB Molecule:nadp-dependent malic enzyme; PDBTitle: crystal structure of a human malic enzyme PDB header:structural genomics Chain: A: PDB Molecule:hypothetical protein atu2571; 41 c2jq4A_ Alignment not modelled 16.7 10 PDBTitle: complete resonance assignments and solution structure calculation of2 atc2521 (nesg id: att6) from agrobacterium tumefaciens Fold:Acyl carrier protein-like 42 d2jq4a1 Alignment not modelled 16.7 10 Superfamily:ACP-like Family:Acyl-carrier protein (ACP) PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent malic enzyme; 43 c1gz3B_ Alignment not modelled 16.1 18 PDBTitle: molecular mechanism for the regulation of human mitochondrial2 nad(p)+-dependent malic enzyme by atp and fumarate Fold:Knottins (small inhibitors, toxins, lectins) 44 d1eita_ Alignment not modelled 15.7 27 Superfamily:omega toxin-like Family:Spider toxins

PDB header:neurotoxin 45 c1eitA_ Alignment not modelled 15.7 27 Chain: A: PDB Molecule:mu-agatoxin-i; PDBTitle: nmr study of mu-agatoxin

Fold:Arginase/deacetylase 46 d1d3va_ Alignment not modelled 15.7 19 Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases

Fold:UDP-Glycosyltransferase/glycogen phosphorylase 47 d2bfwa1 Alignment not modelled 15.7 17 Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1 PDB header:transferase Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)- 48 c3d3qB_ not modelled 15.1 29 Alignment isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100 PDB header:transferase 49 c2x0dA_ Alignment not modelled 14.9 22 Chain: A: PDB Molecule:wsaf; PDBTitle: apo structure of wsaf

Fold:Snake toxin-like 50 d2fd6u1 Alignment not modelled 14.9 31 Superfamily:Snake toxin-like Family:Extracellular domain of cell surface receptors PDB header:membrane protein Chain: A: PDB Molecule:erythrocyte membrane protein 1; 51 c3cpzA_ not modelled 14.8 13 Alignment PDBTitle: crystal structure of var2csa dbl3x domain in the presence of2 dodecasaccharide of csa PDB header:unknown function Chain: A: PDB Molecule:ferredoxin-like protein of unknown function; 52 c3bguA_ not modelled 14.7 17 Alignment PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (tfu_0763) from thermobifida fusca yx at 1.50 a resolution Fold:UDP-Glycosyltransferase/glycogen phosphorylase 53 d1rzua_ Alignment not modelled 14.5 16 Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Alignment Family:Glycosyl transferases group 1 PDB header:transcription regulator Chain: A: PDB Molecule:sugar-binding transcriptional regulator, laci family; 54 c3dbiA_ not modelled 13.8 13 Alignment PDBTitle: crystal structure of sugar-binding transcriptional regulator (laci2 family) from escherichia coli complexed with phosphate PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent malic enzyme; 55 c1o0sB_ not modelled 13.7 27 Alignment PDBTitle: crystal structure of ascaris suum malic enzyme complexed with nadh Fold:Aminoacid dehydrogenase-like, N-terminal domain 56 d1vl6a2 Alignment not modelled 13.6 22 Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Malic enzyme N-domain PDB header:rna binding protein Chain: A: PDB Molecule:rna-directed rna polymerase; 57 c3jsbA_ not modelled 13.4 31 Alignment PDBTitle: crystal structure of the n-terminal domain of the lymphocytic2 choriomeningitis virus l protein Fold:Arginase/deacetylase 58 d2a0ma1 Alignment not modelled 13.3 20 Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases PDB header:hydrolase Chain: B: PDB Molecule:3-guanidinopropionase; 59 c3nipB_ not modelled 13.2 15 Alignment PDBTitle: crystal structure of pseudomonas aeruginosa guanidinopropionase2 complexed with 1,6-diaminohexane PDB header:transferase Chain: A: PDB Molecule:infectious bursal virus vp1 polymerase; 60 c2r70A_ Alignment not modelled 12.8 21 PDBTitle: crystal structure of infectious bursal disease virus vp12 polymerase, cocrystallized with an oligopeptide mimicking3 the vp3 c-terminus. PDB header:membrane protein Chain: A: PDB Molecule:erythrocyte membrane protein 1; 61 c2xu0A_ Alignment not modelled 12.4 13 PDBTitle: crystal structure of the nts-dbl1(alpha-1) domain of the plasmodium2 falciparum membrane protein 1 (pfemp1) from the varo strain. Fold:Phosphorylase/hydrolase-like 62 d1z2la1 Alignment not modelled 12.4 14 Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases

PDB header:oxidoreductase 63 c3nv9A_ Alignment not modelled 12.2 28 Chain: A: PDB Molecule:malic enzyme; PDBTitle: crystal structure of entamoeba histolytica malic enzyme PDB header:transferase/rna Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate 64 c3fozB_ Alignment not modelled 12.1 28 transferase; PDBTitle: structure of e. coli isopentenyl-trna transferase in complex with e.2 coli trna(phe) PDB header:receptor Chain: A: PDB Molecule:duffy receptor, alpha form; 65 c2c6jA_ not modelled 12.0 7 Alignment PDBTitle: structure of p. knowlesi dbl domain capable of binding2 human duffy antigen Fold:Duffy binding domain-like 66 d2c6ja1 Alignment not modelled 12.0 7 Superfamily:Duffy binding domain-like Family:Duffy binding domain

Fold:UDP-Glycosyltransferase/glycogen phosphorylase 67 d1v4va_ Alignment not modelled 11.7 16 Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDP-N-acetylglucosamine 2-epimerase PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dimeric protein of unknown function and ferredoxin-like 68 c3fmbA_ not modelled 11.6 13 Alignment PDBTitle: crystal structure of dimeric protein of unknown function and2 ferredoxin-like fold (yp_212648.1) from bacteroides fragilis nctc3 9343 at 1.85 a resolution Fold:Arginase/deacetylase 69 d1gq6a_ Alignment not modelled 11.3 23 Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases PDB header:membrane protein, protein transport Chain: B: PDB Molecule:escu; 70 c3c00B_ not modelled 10.9 21 Alignment PDBTitle: crystal structural of the mutated g247t escu/spas c- terminal domain PDB header:hydrolase Chain: D: PDB Molecule:allophanate hydrolase subunit 1; 71 c3mmlD_ not modelled 10.7 21 Alignment PDBTitle: allophanate hydrolase complex from mycobacterium smegmatis, msmeg0435-2 msmeg0436 PDB header:immune system Chain: A: PDB Molecule:lung surfactant protein b; 72 c1dfwA_ Alignment not modelled 10.7 56 PDBTitle: conformational mapping of the n-terminal segment of2 surfactant protein b in lipid using 13c-enhanced fourier3 transform infrared spectroscopy (ftir) PDB header:transferase Chain: A: PDB Molecule:adenylate isopentenyltransferase; 73 c3a8tA_ not modelled 10.5 32 Alignment PDBTitle: plant adenylate isopentenyltransferase in complex with atp PDB header:dna binding protein 74 c3b0bA_ Alignment not modelled 10.4 32 Chain: A: PDB Molecule:centromere protein s; PDBTitle: crystal structure of the chicken cenp-s/cenp-x complex PDB header:isomerase Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; 75 c4hwgA_ not modelled 10.4 14 Alignment PDBTitle: structure of udp-n-acetylglucosamine 2-epimerase from rickettsia2 bellii PDB header:hormone Chain: A: PDB Molecule:pancreatic hormone; 76 c2bf9A_ not modelled 9.9 47 Alignment PDBTitle: anisotropic refinement of avian (turkey) pancreatic2 polypeptide at 0.99 angstroms resolution. PDB header:chaperone 77 c3q6nF_ Alignment not modelled 9.9 17 Chain: F: PDB Molecule:heat shock protein hsp 90-alpha; PDBTitle: crystal structure of human mc-hsp90 in p21 space group PDB header:translation Chain: A: PDB Molecule:arginine attenuator peptide; 78 c2xl1A_ Alignment not modelled 9.8 21 PDBTitle: structural basis of translational stalling by human cytomegalovirus2 (hcmv) and fungal arginine attenuator peptide (aap) PDB header:splicing Chain: A: PDB Molecule:pre-mrna-splicing factor prp9; 79 c4dgwA_ not modelled 9.5 18 Alignment PDBTitle: crystal structure of the sf3a splicing factor complex of u2 snrnp PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator gntr; 80 c3h5oB_ not modelled 9.4 11 Alignment PDBTitle: the crystal structure of transcription regulator gntr from2 chromobacterium violaceum PDB header:oxidoreductase Chain: B: PDB Molecule:uncharacterized protein with ferredoxin- like fold; 81 c3fgvB_ not modelled 9.3 18 Alignment PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (spo2313) from silicibacter pomeroyi dss-3 at 1.30 a resolution PDB header:membrane protein Chain: A: PDB Molecule:erythrocyte membrane protein 1; 82 c2yk0A_ Alignment not modelled 9.2 15 PDBTitle: structure of the n-terminal nts-dbl1-alpha and cidr- gamma double2 domain of the pfemp1 protein from plasmodium falciparum varo3 strain. Fold:Ferredoxin-like 83 d1q4ra_ Alignment not modelled 9.0 13 Superfamily:Dimeric alpha+beta barrel Family:Plant stress-induced protein

Fold:MCP/YpsA-like 84 d1weha_ Alignment not modelled 8.8 20 Superfamily:MCP/YpsA-like Family:MoCo carrier protein-like PDB header:transferase Chain: B: PDB Molecule:nucleotide sugar synthetase-like protein; 85 c3rhzB_ Alignment not modelled 8.8 13 PDBTitle: structure and functional analysis of a new subfamily of2 glycosyltransferases required for glycosylation of serine-rich3 streptococcal adhesions PDB header:sugar binding protein Chain: B: PDB Molecule:trehalose-synthase tret; 86 c2xmpB_ not modelled 8.8 9 Alignment PDBTitle: crystal structure of trehalose synthase tret mutant e326a2 from p.horishiki in complex with udp PDB header:transcription regulator Chain: B: PDB Molecule:transcription regulator; 87 c3clkB_ not modelled 8.8 15 Alignment PDBTitle: crystal structure of a transcription regulator from lactobacillus2 plantarum PDB header:neuropeptide 88 c2dezA_ Alignment not modelled 8.7 27 Chain: A: PDB Molecule:peptide yy; PDBTitle: structure of human pyy

Fold:UDP-Glycosyltransferase/glycogen phosphorylase 89 d2bisa1 Alignment not modelled 8.7 16 Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1 PDB header:signaling protein Chain: A: PDB Molecule:lymphocyte cytosolic protein 2; 90 c2eapA_ not modelled 8.5 31 Alignment PDBTitle: solution structure of the n-terminal sam-domain of human2 lymphocyte cytosolic protein 2 Fold:SAM domain-like 91 d1pk3a1 Alignment not modelled 8.5 17 Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain

PDB header:neuropeptide 92 c1ronA_ Alignment not modelled 8.4 20 Chain: A: PDB Molecule:neuropeptide y; PDBTitle: nmr solution structure of human neuropeptide y

Fold:RuvA C-terminal domain-like 93 d1olma1 Alignment not modelled 8.3 10 Superfamily:CRAL/TRIO N-terminal domain Family:CRAL/TRIO N-terminal domain

PDB header:structural protein 94 c2zv4O_ Alignment not modelled 8.3 29 Chain: O: PDB Molecule:major vault protein; PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution PDB header:hydrolase Chain: F: PDB Molecule:urokinase plasminogen activator surface 95 c2i9bF_ not modelled 8.2 31 Alignment receptor; PDBTitle: crystal structure of atf-urokinase receptor complex Fold:Flavodoxin-like 96 d1zmba1 Alignment not modelled 8.1 21 Superfamily:SGNH hydrolase Family:Putative acetylxylan esterase-like Fold:Anticodon-binding domain of a subclass of class I aminoacyl- tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I 97 d1li5a1 not modelled 8.0 40 Alignment aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Fold:Arginase/deacetylase 98 d2aeba1 Alignment not modelled 8.0 17 Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases

PDB header:hydrolase 99 c4g3hC_ Alignment not modelled 7.9 20 Chain: C: PDB Molecule:arginase (rocf); PDBTitle: crystal structure of helicobacter pylori arginase