Jungermanniopsida, Calypogeiaceae)
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Two Morphologically Distinct Groups of the Calypogeia Fissa Complex Were Found in Europe
Biodiv. Res. Conserv. 23: 29-41, 2011 BRC www.brc.amu.edu.pl DOI 10.2478/v10119-011-0014-x Two morphologically distinct groups of the Calypogeia fissa complex were found in Europe Katarzyna Buczkowska1*, Jakub Sawicki2, Monika SzczeciÒska2, Stanis≥aw RosadziÒski3, Mariola Rabska1 & Alina Bπczkiewicz1 1Department of Genetics, Adam Mickiewicz University, Umultowska 89, 61-614 PoznaÒ, Poland, e-mail: *[email protected] 2Department of Botany and Nature Protection, Uniwersity of Warmia and Mazury in Olsztyn, Plac £Ûdzki 1, 10-728 Olsztyn, Poland 3Department of Plant Ecology and Environmental Protection, Adam Mickiewicz University, Umultowska 89, 61-614 PoznaÒ, Poland Abstract: Two genetically distinct groups (PS and PB) detected previously within the C. fissa complex in Europe were studied with respect to 47 morphometric characters. The two examined groups differed statistically significantly with respect to 34 morphological traits. The forward stepwise method of discriminant analysis showed that the set of diagnostic characters could be limited to nine. The best diagnostic features were morphological characters describing the shape of leaf: length and width of leaf, height of dorsal part and distance from the apex to the ventral base of the leaf, length of the 3rd coordinate of the leaf, and underleaf width as well as characters of the stem: length of internodes and size of internode cells. Plants of the PS group were smaller (shoot width range from 922-1780 µm) than plants of the PB group (1600-3900 µm). Based on genetically identified samples, classification functions for each group were computed and the derived functions were used for the classi- fication of samples from the herbarium collections. -
Mitochondrial Genomes of the Early Land Plant Lineage
Dong et al. BMC Genomics (2019) 20:953 https://doi.org/10.1186/s12864-019-6365-y RESEARCH ARTICLE Open Access Mitochondrial genomes of the early land plant lineage liverworts (Marchantiophyta): conserved genome structure, and ongoing low frequency recombination Shanshan Dong1,2, Chaoxian Zhao1,3, Shouzhou Zhang1, Li Zhang1, Hong Wu2, Huan Liu4, Ruiliang Zhu3, Yu Jia5, Bernard Goffinet6 and Yang Liu1,4* Abstract Background: In contrast to the highly labile mitochondrial (mt) genomes of vascular plants, the architecture and composition of mt genomes within the main lineages of bryophytes appear stable and invariant. The available mt genomes of 18 liverwort accessions representing nine genera and five orders are syntenous except for Gymnomitrion concinnatum whose genome is characterized by two rearrangements. Here, we expanded the number of assembled liverwort mt genomes to 47, broadening the sampling to 31 genera and 10 orders spanning much of the phylogenetic breadth of liverworts to further test whether the evolution of the liverwort mitogenome is overall static. Results: Liverwort mt genomes range in size from 147 Kb in Jungermanniales (clade B) to 185 Kb in Marchantiopsida, mainly due to the size variation of intergenic spacers and number of introns. All newly assembled liverwort mt genomes hold a conserved set of genes, but vary considerably in their intron content. The loss of introns in liverwort mt genomes might be explained by localized retroprocessing events. Liverwort mt genomes are strictly syntenous in genome structure with no structural variant detected in our newly assembled mt genomes. However, by screening the paired-end reads, we do find rare cases of recombination, which means multiple concurrent genome structures may exist in the vegetative tissues of liverworts. -
Bryophyte Flora of the Czech Republic: Updated Checklist and Red List and a Brief Analysis
Preslia 84: 813–850, 2012 813 Bryophyte flora of the Czech Republic: updated checklist and Red List and a brief analysis Bryoflóra České republiky: aktualizace seznamu a červeného seznamu a stručná analýza Dedicated to the centenary of the Czech Botanical Society (1912–2012) Jan K u č e r a1, Jiří Vá ň a2 & Zbyněk H r a d í l e k3 1University of South Bohemia, Faculty of Science, Branišovská 31, CZ–370 05 České Budějovice, Czech Republic, e-mail: [email protected]; 2Charles University Prague, Department of Botany, Faculty of Science, Benátská 2, CZ–128 01 Prague 2, Czech Republic, e-mail: [email protected]; 3Palacký University Olomouc, Department of Botany, Faculty of Science, Šlechtitelů 11, CZ-783 71 Olomouc-Holice, Czech Republic, e-mail: [email protected]. Kučera J., Váňa J. & Hradílek Z. (2012): Bryophyte flora of the Czech Republic: updated checklist and Red List and a brief analysis. – Preslia 84: 813–850. The bryoflora of the Czech Republic is analysed using an updated version of the checklist that includes recent taxonomic and nomenclatural changes. In addition, the baseline data was com- pletely revised using the IUCN 3.1 criteria. The main list includes 863 species of bryophytes (4 hornworts, 207 liverworts and 652 mosses) with 5 additional subspecies and 23 generally recog- nized varieties; 9 additional species are listed as of doubtful taxonomic status and 17 other species are evaluated as of uncertain occurrence. Of the 892 taxa evaluated, 46% qualified for inclusion in Red List categories (40 taxa in category RE, 70 in CR, 88 in EN, 93 in VU, 66 in LR-nt, 24 in DD-va and 30 in DD), while 54% are considered Least Concern (LC). -
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cryptogamie Bryologie 2021 ● 42 ● 4 DIRECTEUR DE LA PUBLICATION / PUBLICATION DIRECTOR : Bruno David, Président du Muséum national d’Histoire naturelle RÉDACTEUR EN CHEF / EDITOR-IN-CHIEF : Denis LAMY ASSISTANTE DE RÉDACTION / ASSISTANT EDITOR : Marianne SALAÜN ([email protected]) MISE EN PAGE / PAGE LAYOUT : Marianne SALAÜN RÉDACTEURS ASSOCIÉS / ASSOCIATE EDITORS Biologie moléculaire et phylogénie / Molecular biology and phylogeny Bernard GOFFINET Department of Ecology and Evolutionary Biology, University of Connecticut (United States) Mousses d’Europe / European mosses Isabel DRAPER Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid (Spain) Francisco LARA GARCÍA Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid (Spain) Mousses d’Afrique et d’Antarctique / African and Antarctic mosses Rysiek OCHYRA Laboratory of Bryology, Institute of Botany, Polish Academy of Sciences, Krakow (Pologne) Bryophytes d’Asie / Asian bryophytes Rui-Liang ZHU School of Life Science, East China Normal University, Shanghai (China) Bioindication / Biomonitoring Franck-Olivier DENAYER Faculté des Sciences Pharmaceutiques et Biologiques de Lille, Laboratoire de Botanique et de Cryptogamie, Lille (France) Écologie des bryophytes / Ecology of bryophyte Nagore GARCÍA MEDINA Department of Biology (Botany), and Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid (Spain) COUVERTURE / COVER : Extraits d’éléments de la Figure -
Jungermanniales of Coles and Clark Counties of Illinois Charles T
Eastern Illinois University The Keep Masters Theses Student Theses & Publications 1976 Jungermanniales of Coles and Clark Counties of Illinois Charles T. Schiller Eastern Illinois University This research is a product of the graduate program in Botany at Eastern Illinois University. Find out more about the program. Recommended Citation Schiller, Charles T., "Jungermanniales of Coles and Clark Counties of Illinois" (1976). Masters Theses. 3372. https://thekeep.eiu.edu/theses/3372 This is brought to you for free and open access by the Student Theses & Publications at The Keep. It has been accepted for inclusion in Masters Theses by an authorized administrator of The Keep. For more information, please contact [email protected]. JUNGERMANNIALES OF COLES AND CLARK COUNTIES OF ILLINOIS (TITLE) BY CHARLES T. SCHILLER THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTERS OF SCIENCE IN THE GRADUATE SCHOOL, EASTERN ILLINOIS UNIVERSITY CHARLESTON, ILLINOIS ,· 1976 YEAR \ I HEREBY RECOMMEND THIS THESIS BE ACCEPTED AS FULFILLING THIS PART OF THE GRADUATE DEGREE CITED ABOVE ADVISER PAPER CERTIFICATE #2 TO: Graduate Degree Candidates who have written formal theses. SUBJECT: Permission to reproduce theses. ' The University Library is receiving a nurnber of requests from other institutions asking permission to reproduce dissertations for inclusion in their library holdings. Although no copyright laws are involved, we feel that professional courtesy demands that permission be obtained from the author before we allow theses to be copied. Please sign one of the following statements: Booth Library of Eastern Illinois University has my permission to lend my thesis to a reputable college or university for the purpose of copying it for inclusion in that institution's library or research holdings. -
2447 Introductions V3.Indd
BRYOATT Attributes of British and Irish Mosses, Liverworts and Hornworts With Information on Native Status, Size, Life Form, Life History, Geography and Habitat M O Hill, C D Preston, S D S Bosanquet & D B Roy NERC Centre for Ecology and Hydrology and Countryside Council for Wales 2007 © NERC Copyright 2007 Designed by Paul Westley, Norwich Printed by The Saxon Print Group, Norwich ISBN 978-1-85531-236-4 The Centre of Ecology and Hydrology (CEH) is one of the Centres and Surveys of the Natural Environment Research Council (NERC). Established in 1994, CEH is a multi-disciplinary environmental research organisation. The Biological Records Centre (BRC) is operated by CEH, and currently based at CEH Monks Wood. BRC is jointly funded by CEH and the Joint Nature Conservation Committee (www.jncc/gov.uk), the latter acting on behalf of the statutory conservation agencies in England, Scotland, Wales and Northern Ireland. CEH and JNCC support BRC as an important component of the National Biodiversity Network. BRC seeks to help naturalists and research biologists to co-ordinate their efforts in studying the occurrence of plants and animals in Britain and Ireland, and to make the results of these studies available to others. For further information, visit www.ceh.ac.uk Cover photograph: Bryophyte-dominated vegetation by a late-lying snow patch at Garbh Uisge Beag, Ben Macdui, July 2007 (courtesy of Gordon Rothero). Published by Centre for Ecology and Hydrology, Monks Wood, Abbots Ripton, Huntingdon, Cambridgeshire, PE28 2LS. Copies can be ordered by writing to the above address until Spring 2008; thereafter consult www.ceh.ac.uk Contents Introduction . -
Marchantiophyta
Glime, J. M. 2017. Marchantiophyta. Chapt. 2-3. In: Glime, J. M. Bryophyte Ecology. Volume 1. Physiological Ecology. Ebook 2-3-1 sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 9 July 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 2-3 MARCHANTIOPHYTA TABLE OF CONTENTS Distinguishing Marchantiophyta ......................................................................................................................... 2-3-2 Elaters .......................................................................................................................................................... 2-3-3 Leafy or Thallose? ....................................................................................................................................... 2-3-5 Class Marchantiopsida ........................................................................................................................................ 2-3-5 Thallus Construction .................................................................................................................................... 2-3-5 Sexual Structures ......................................................................................................................................... 2-3-6 Sperm Dispersal ........................................................................................................................................... 2-3-8 Class Jungermanniopsida ................................................................................................................................. -
Kenai National Wildlife Refuge's Species List
Kenai National Wildlife Refuge Species List, version 2017-06-30 Kenai National Wildlife Refuge biology staff June 30, 2017 2 Cover images represent changes to the checklist. Top left: Halobi- sium occidentale observed at Gull Rock, June 8, 2017 (https://www. inaturalist.org/observations/6565787). Image CC BY Matt Bowser. Top right: Aegialites alaskaensis observed at Gull Rock, June 8, 2017 (http://www.inaturalist.org/observations/6612922). Image CC BY Matt Bowser. Bottom left: Fucus distichus observed at Gull Rock, June 8, 2017 (https://www.inaturalist.org/observations/6612338). Image CC BY Matt Bowser. Bottom right: Littorina subrotundata observed at Gull Rock, June 8, 2017 (http://www.inaturalist.org/observations/6612398). Image CC BY Matt Bowser. Contents Contents 3 Introduction 5 Purpose............................................................ 5 About the list......................................................... 5 Acknowledgments....................................................... 5 Native species 7 Vertebrates .......................................................... 7 Invertebrates ......................................................... 24 Vascular Plants........................................................ 47 Bryophytes .......................................................... 59 Chromista........................................................... 63 Fungi ............................................................. 63 Protozoa............................................................ 72 Non-native species 73 -
Isozyme and Dna Markers Reveal a New Genetically Distinct Taxon of Calypogeia Sphagnicola (Jungermanniopsiada, Calypogeiaceae)
Polish Botanical Journal 57(1): 95–107, 2012 ISOZYME AND DNA MARKERS REVEAL A NEW GENETICALLY DISTINCT TAXON OF CALYPOGEIA SPHAGNICOLA (JUNGERMANNIOPSIADA, CALYPOGEIACEAE) KATARZYNA BUCZKOWSKA, JAKUB SAWICKI, MONIKA SZCZECIŃSKA, HENRYK KLAMA & ALINA BĄCZKIEWICZ Abstract. Genetic studies of Calypogeia sphagnicola (Arnell & J. Perss.) Warnst. & Loeske revealed that besides C. sphagnicola f. sphagnicola and C. sphagnicola f. paludosa (Warnst.) Schust., recently recognized as separate species, a third genetically distinct group of plants connected with Sphagnum communities can be distinguished in the Calypogeia genus in Poland. The new group differs from C. sphagnicola f. sphagnicola in 4 loci and from C. sphagnicola f. paludosa in 6 loci. The distinctness of the new group was supported by sequence analysis of four chloroplast loci (rpoC1, trnH-psbA, trnG, trnL) and species-specifi c SCAR markers. Three SCAR markers (Cal01, Cal02 and Cal03) distinguished the new Calypogeia group both from two C. sphagnicola forms as well as from other European Calypogeia species. The new C. sphagnicola is very rare, so far it was found in only one locality in the Tatra National Park, where it occurs in a swamp by the Sichlański stream, in the Las Capowski forest. Key words: Liverworts, Calypogeia, chloroplast genome, isozyme pattern, SCAR markers Katarzyna Buczkowska & Alina Bączkiewicz, Department of Genetics, Adam Mickiewicz University, Umultowska 89, 61-614 Poznań, Poland; e-mail: [email protected] & [email protected] Jakub Sawicki & Monika Szczecińska, Department of Botany and Nature Protection, Uniwersity of Warmia and Mazury in Olsztyn, Plac Łódzki 1, 10-728 Olsztyn, Poland; e-mail: [email protected] & [email protected] Henryk Klama, Institute of Environmental Protection and Engineering, University of Bielsko-Biała, Willowa 2, 43-309 Bielsko- Biała, Poland; e-mail: [email protected] INTRODUCTION Complementing classical taxonomy of liverworts, known from Europe: C. -
A Miniature World in Decline: European Red List of Mosses, Liverworts and Hornworts
A miniature world in decline European Red List of Mosses, Liverworts and Hornworts Nick Hodgetts, Marta Cálix, Eve Englefield, Nicholas Fettes, Mariana García Criado, Lea Patin, Ana Nieto, Ariel Bergamini, Irene Bisang, Elvira Baisheva, Patrizia Campisi, Annalena Cogoni, Tomas Hallingbäck, Nadya Konstantinova, Neil Lockhart, Marko Sabovljevic, Norbert Schnyder, Christian Schröck, Cecilia Sérgio, Manuela Sim Sim, Jan Vrba, Catarina C. Ferreira, Olga Afonina, Tom Blockeel, Hans Blom, Steffen Caspari, Rosalina Gabriel, César Garcia, Ricardo Garilleti, Juana González Mancebo, Irina Goldberg, Lars Hedenäs, David Holyoak, Vincent Hugonnot, Sanna Huttunen, Mikhail Ignatov, Elena Ignatova, Marta Infante, Riikka Juutinen, Thomas Kiebacher, Heribert Köckinger, Jan Kučera, Niklas Lönnell, Michael Lüth, Anabela Martins, Oleg Maslovsky, Beáta Papp, Ron Porley, Gordon Rothero, Lars Söderström, Sorin Ştefǎnuţ, Kimmo Syrjänen, Alain Untereiner, Jiri Váňa Ɨ, Alain Vanderpoorten, Kai Vellak, Michele Aleffi, Jeff Bates, Neil Bell, Monserrat Brugués, Nils Cronberg, Jo Denyer, Jeff Duckett, H.J. During, Johannes Enroth, Vladimir Fedosov, Kjell-Ivar Flatberg, Anna Ganeva, Piotr Gorski, Urban Gunnarsson, Kristian Hassel, Helena Hespanhol, Mark Hill, Rory Hodd, Kristofer Hylander, Nele Ingerpuu, Sanna Laaka-Lindberg, Francisco Lara, Vicente Mazimpaka, Anna Mežaka, Frank Müller, Jose David Orgaz, Jairo Patiño, Sharon Pilkington, Felisa Puche, Rosa M. Ros, Fred Rumsey, J.G. Segarra-Moragues, Ana Seneca, Adam Stebel, Risto Virtanen, Henrik Weibull, Jo Wilbraham and Jan Żarnowiec About IUCN Created in 1948, IUCN has evolved into the world’s largest and most diverse environmental network. It harnesses the experience, resources and reach of its more than 1,300 Member organisations and the input of over 10,000 experts. IUCN is the global authority on the status of the natural world and the measures needed to safeguard it. -
Bryophyte Ecology Glossary
Glime, J. M. and Chavoutier, L. 2017. Glossary. In: Glime, J. M. Bryophyte Ecology. Ebook sponsored by Michigan Technological G-1 University and the International Association of Bryologists. Last updated 16 July 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. GLOSSARY JANICE GLIME AND LEICA CHAVOUTIER 1n: having only one set of chromosomes s.s.: Latin sensu stricto, meaning strict sense sp.: species 2n: having two sets of chromosomes spp.: more than one species 2,4-D: 2,4-dichlorophenoxyacetic acid; herbicide that mimics ssp.: subspecies IAA var.: variety 6-methoxybenzoxazolinone (6-MBOA): glycoside derivative; insect antifeedant; can stimulate reproductive activity in some small mammals that eat them by providing growth abiosis: absence or lack of life; nonviable state substances abiotic: referring to non-living and including dust and other >>: much greater particles gained from atmosphere, organic leachates from bryophytes (and host trees for epiphytes), decaying ♀: sign meaning female, i.e. bearing archegonia bryophyte parts, and remains of dead inhabitants; usually ♂: symbol meaning male includes substrate abortive: having development that is incomplete, abnormal, A stopped before maturity α-amylase: enzyme that hydrolyses alpha bonds of large, alpha- abscisic acid: ABA; plant hormone (growth regulator) linked polysaccharides, such as starch and glycogen, yielding abscission: process where plant organs are shed; e.g. deciduous glucose and maltose leaves in autumn A horizon: dark-colored soil layer with organic -
Comparative Analysis of Four Calypogeia Species Revealed Unexpected Change in Evolutionarily-Stable Liverwort Mitogenomes
G C A T T A C G G C A T genes Article Comparative Analysis of Four Calypogeia Species Revealed Unexpected Change in Evolutionarily-Stable Liverwort Mitogenomes Monika Slipiko´ 1,*, Kamil Myszczy ´nski 1 ID , Katarzyna Buczkowska-Chmielewska 2, Alina B ˛aczkiewicz 2, Monika Szczeci ´nska 1 and Jakub Sawicki 1 1 Department of Botany and Nature Protection, University of Warmia and Mazury in Olsztyn, Plac Łódzki 1, 10-727 Olsztyn, Poland; [email protected] (K.M.); [email protected] (M.S.); [email protected] (J.S.) 2 Department of Biology, Institute of Experimental Biology, Adam Mickiewicz University in Pozna´n, Umultowska 89, 61-614 Pozna´n,Poland; [email protected] (K.B.-C.); [email protected] (A.B.) * Correspondence: [email protected]; Tel.: +48-89-523-33-11 Received: 11 October 2017; Accepted: 12 December 2017; Published: 19 December 2017 Abstract: Liverwort mitogenomes are considered to be evolutionarily stable. A comparative analysis of four Calypogeia species revealed differences compared to previously sequenced liverwort mitogenomes. Such differences involve unexpected structural changes in the two genes, cox1 and atp1, which have lost three and two introns, respectively. The group I introns in the cox1 gene are proposed to have been lost by two-step localized retroprocessing, whereas one-step retroprocessing could be responsible for the disappearance of the group II introns in the atp1 gene. These cases represent the first identified losses of introns in mitogenomes of leafy liverworts (Jungermanniopsida) contrasting the stability of mitochondrial gene order with certain changes in the gene content and intron set in liverworts.