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Management Strategies for Control of Soybean Cyst Nematode and Their Effect on Nematode Community
Management Strategies for Control of Soybean Cyst Nematode and Their Effect on Nematode Community A Thesis SUBMITTED TO THE FACULTY OF UNIVERSITY OF MINNESOTA BY Zane Grabau IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE Dr. Senyu Chen June 2013 © Zane Grabau 2013 Acknowledgements I would like to acknowledge my committee members John Lamb, Robert Blanchette, and advisor Senyu Chen for their helpful feedback and input on my research and thesis. Additionally, I would like to thank my advisor Senyu Chen for giving me the opportunity to conduct research on nematodes and, in many ways, for making the research possible. Additionally, technicians Cathy Johnson and Wayne Gottschalk at the Southern Research and Outreach Center (SROC) at Waseca deserve much credit for the hours of technical work they devoted to these experiments without which they would not be possible. I thank Yong Bao for his patient in initially helping to train me to identify free-living nematodes and his assistance during the first year of the field project. Similarly, I thank Eyob Kidane, who, along with Senyu Chen, trained me in the methods for identification of fungal parasites of nematodes. Jeff Vetsch from SROC deserves credit for helping set up the field project and advising on all things dealing with fertilizers and soil nutrients. I want to acknowledge a number of people for helping acquire the amendments for the greenhouse study: Russ Gesch of ARS in Morris, MN; SROC swine unit; and Don Wyse of the University of Minnesota. Thanks to the University of Minnesota Plant Disease Clinic for contributing information for the literature review. -
The Complete Mitochondrial Genome of the Columbia Lance Nematode
Ma et al. Parasites Vectors (2020) 13:321 https://doi.org/10.1186/s13071-020-04187-y Parasites & Vectors RESEARCH Open Access The complete mitochondrial genome of the Columbia lance nematode, Hoplolaimus columbus, a major agricultural pathogen in North America Xinyuan Ma1, Paula Agudelo1, Vincent P. Richards2 and J. Antonio Baeza2,3,4* Abstract Background: The plant-parasitic nematode Hoplolaimus columbus is a pathogen that uses a wide range of hosts and causes substantial yield loss in agricultural felds in North America. This study describes, for the frst time, the complete mitochondrial genome of H. columbus from South Carolina, USA. Methods: The mitogenome of H. columbus was assembled from Illumina 300 bp pair-end reads. It was annotated and compared to other published mitogenomes of plant-parasitic nematodes in the superfamily Tylenchoidea. The phylogenetic relationships between H. columbus and other 6 genera of plant-parasitic nematodes were examined using protein-coding genes (PCGs). Results: The mitogenome of H. columbus is a circular AT-rich DNA molecule 25,228 bp in length. The annotation result comprises 12 PCGs, 2 ribosomal RNA genes, and 19 transfer RNA genes. No atp8 gene was found in the mitog- enome of H. columbus but long non-coding regions were observed in agreement to that reported for other plant- parasitic nematodes. The mitogenomic phylogeny of plant-parasitic nematodes in the superfamily Tylenchoidea agreed with previous molecular phylogenies. Mitochondrial gene synteny in H. columbus was unique but similar to that reported for other closely related species. Conclusions: The mitogenome of H. columbus is unique within the superfamily Tylenchoidea but exhibits similarities in both gene content and synteny to other closely related nematodes. -
Morphological and Molecular Characterization And
Turkish Journal of Zoology Turk J Zool (2017) 41: 227-236 http://journals.tubitak.gov.tr/zoology/ © TÜBİTAK Research Article doi:10.3906/zoo-1506-47 Morphological and molecular characterization and phylogenetic position of a new record, Tylenchorhynchus zeae, and some known species of Telotylenchidae Siddiqi, 1960 and Merliniidae Siddiqi, 1971 from Iran 1 1, 1 2 Somaye ALVANI , Esmat MAHDIKHANI-MOGHADAM *, Hamid ROUHANI , Abbas MOHAMMADI 1 Department of Plant Protection, Faculty of Agriculture, Ferdowsi University of Mashhad, Mashhad, Iran 2 Department of Plant Protection, Faculty of Agriculture, University of Birjand, Birjand, Iran Received: 04.07.2015 Accepted/Published Online: 01.07.2016 Final Version: 04.04.2017 Abstract: In order to identify the plant-parasitic nematodes associated with Berberis vulgaris, Crocus sativus, and Ziziphus zizyphus, 360 soil samples were collected from the rhizosphere of these plants in the South Khorasan Province of Iran during 2012–2014. Among the identified species, Tylenchorhynchus zeae Sethi and Swarup, 1968 of Telotylenchidae Siddiqi, 1960 is a new record from Iran and the isolate is described and illustrated based on morphological, morphometric, and molecular characteristics. The phylogenetic tree inferred from partial sequences of the 28S rRNA (D2D3 segments) grouped the Iranian isolate with other T. zeae sequences, forming a strongly supported clade (Bayesian posterior probability: 100%). T. zeae is reported here for the first time on Ziziphus zizyphus for Iranian nematofauna. Additional morphological and molecular information is also provided for other species including Amplimerlinius globigerus, Merlinius brevidens, Pratylenchoides alkani, P. ritteri, Scutylenchus rugosus, S. tartuensis, and Trophurus impar from B. vulgaris, C. sativus, and Z. -
A Synopsis of the Genera and Species in the Tylenchorhynchinae (Tylenchoidea, Nematoda)1
OF WASHINGTON, VOLUME 40, NUMBER 1, JANUARY 1973 123 Speer, C. A., and D. M. Hammond. 1970. tured bovine cells. J. Protozool. 18 (Suppl.): Development of Eimeria larimerensis from the 11. Uinta ground squirrel in cell cultures. Ztschr. Vetterling, J. M., P. A. Madden, and N. S. Parasitenk. 35: 105-118. Dittemore. 1971. Scanning electron mi- , L. R. Davis, and D. M. Hammond. croscopy of poultry coccidia after in vitro 1971. Cinemicrographic observations on the excystation and penetration of cultured cells. development of Eimeria larimerensis in cul- Ztschr. Parasitenk. 37: 136-147. A Synopsis of the Genera and Species in the Tylenchorhynchinae (Tylenchoidea, Nematoda)1 A. C. TARJAN2 ABSTRACT: The genera Uliginotylenchus Siddiqi, 1971, Quinisulcius Siddiqi, 1971, Merlinius Siddiqi, 1970, Ttjlenchorhynchus Cobb, 1913, Tetylenchus Filipjev, 1936, Nagelus Thome and Malek, 1968, and Geocenamus Thorne and Malek, 1968 are discussed. Keys and diagnostic data are presented. The following new combinations are made: Tetylenchus aduncus (de Guiran, 1967), Merlinius al- boranensis (Tobar-Jimenez, 1970), Geocenamus arcticus (Mulvey, 1969), Merlinius brachycephalus (Litvinova, 1946), Merlinius gaudialis (Izatullaeva, 1967), Geocenamus longus (Wu, 1969), Merlinius parobscurus ( Mulvey, 1969), Merlinius polonicus (Szczygiel, 1970), Merlinius sobolevi (Mukhina, 1970), and Merlinius tatrensis (Sabova, 1967). Tylenchorhynchus galeatus Litvinova, 1946 is with- drawn from the genus Merlinius. The following synonymies are made: Merlinius berberidis (Sethi and Swarup, 1968) is synonymized to M. hexagrammus (Sturhan, 1966); Ttjlenchorhynchus chonai Sethi and Swarup, 1968 is synonymized to T. triglyphus Seinhorst, 1963; Quinisulcius nilgiriensis (Seshadri et al., 1967) is synonymized to Q. acti (Hopper, 1959); and Tylenchorhynchus tener Erzhanova, 1964 is regarded a synonym of T. -
Australasian Nematology Newsletter
ISSN 1327-2101 AUSTRALASIAN NEMATOLOGY NEWSLETTER Published by: Australasian Association of Nematologists VOLUME 15 NO. 1 JANUARY 2004 1 From the Editor Thank you to all those who made contributions to this newsletter. July Issue The deadline for the July issue will be June 15th. I will notify you a month in advance so please have your material ready once again. Contacts Dr Mike Hodda President, Australasian Association of Nematologists CSIRO Division of Entomology Tel: (02) 6246 4371 GPO Box 1700 Fax: (02) 6246 4000 CANBERRA ACT 2601 Email: [email protected] Dr Ian Riley Secretary, Australasian Association of Nematologists Department of Applied & Molecular Ecology University of Adelaide Tel: (08) 8303-7259 PMB 1 Fax: (08) 8379-4095 GLEN OSMOND SA 5064 Email: [email protected] Mr John Lewis Treasurer, Australasian Association of Nematologists SARDI, Plant Pathology Unit Tel: (08) 8303 9394 GPO Box 397 Fax: (08) 8303 9393 ADELAIDE SA 5100 Email: [email protected] Ms Jennifer Cobon Editor, Australasian Association of Nematologists Department of Primary Industries Tel: (07) 3896 9892 80 Meiers Road Fax: (07) 3896 9533 INDOOROOPILLY QLD 4068 Email: [email protected] 1 Association News WORKSHOP NOTICE Review of nematode resistance screening/breeding in Australasia A Workshop of the Australasian Association of Nematologists Friday, 6 February 2004 Plant Research Centre, Waite Campus, Urrbrae, South Australia The program will commence with a keynote presentation by Dr Roger Cook – a global overview on development of nematode resistant crops – followed by a series of short presentations by individuals actively involved in screening/breeding for nematode resistance in Australasia. -
Observations on the Genus Doronchus Andrássy
Vol. 20, No. 1, pp.91-98 International Journal of Nematology June, 2010 Occurrence and distribution of nematodes in Idaho crops Saad L. Hafez*, P. Sundararaj*, Zafar A. Handoo** and M. Rafiq Siddiqi*** *University of Idaho, 29603 U of I Lane, Parma, Idaho 83660, USA **USDA-ARS-Nematology Laboratory, Beltsville, Maryland 20705, USA ***Nematode Taxonomy Laboratory, 24 Brantwood Road, Luton, LU1 1JJ, England, UK E-mail: [email protected] Abstract. Surveys were conducted in Idaho, USA during the 2000-2006 cropping seasons to study the occurrence, population density, host association and distribution of plant-parasitic nematodes associated with major crops, grasses and weeds. Eighty-four species and 43 genera of plant-parasitic nematodes were recorded in soil samples from 29 crops in 20 counties in Idaho. Among them, 36 species are new records in this region. The highest number of species belonged to the genus Pratylenchus; P. neglectus was the predominant species among all species of the identified genera. Among the endoparasitic nematodes, the highest percentage of occurrence was Pratylenchus (29.7) followed by Meloidogyne (4.4) and Heterodera (3.4). Among the ectoparasitic nematodes, Helicotylenchus was predominant (8.3) followed by Mesocriconema (5.0) and Tylenchorhynchus (4.8). Keywords. Distribution, Helicotylenchus, Heterodera, Idaho, Meloidogyne, Mesocriconema, population density, potato, Pratylenchus, survey, Tylenchorhynchus, USA. INTRODUCTION and cropping systems in Idaho are highly conducive for nematode multiplication. Information concerning the revious reports have described the association of occurrence and distribution of nematodes in Idaho is plant-parasitic nematode species associated with important to assess their potential to cause economic damage P several crops in the Pacific Northwest (Golden et al., to many crop plants. -
Transcriptome Profiling of the Root-Knot Nematode Meloidogyne Enterolobii During Parasitism and Identification of Novel Effector Proteins
Ecole Doctorale de Sciences de la Vie et de la Santé Unité de recherche : UMR ISA INRA 1355-UNS-CNRS 7254 Thèse de doctorat Présentée en vue de l’obtention du grade de docteur en Biologie Moléculaire et Cellulaire de L’UNIVERSITE COTE D’AZUR par NGUYEN Chinh Nghia Etude de la régulation du transcriptome de nématodes parasites de plante, les nématodes à galles du genre Meloidogyne Dirigée par Dr. Bruno FAVERY Soutenance le 8 Décembre, 2016 Devant le jury composé de : Pr. Pierre FRENDO Professeur, INRA UNS CNRS Sophia-Antipolis Président Dr. Marc-Henri LEBRUN Directeur de Recherche, INRA AgroParis Tech Grignon Rapporteur Dr. Nemo PEETERS Directeur de Recherche, CNRS-INRA Castanet Tolosan Rapporteur Dr. Stéphane JOUANNIC Chargé de Recherche, IRD Montpellier Examinateur Dr. Bruno FAVERY Directeur de Recherche, UNS CNRS Sophia-Antipolis Directeur de thèse Doctoral School of Life and Health Sciences Research Unity: UMR ISA INRA 1355-UNS-CNRS 7254 PhD thesis Presented and defensed to obtain Doctor degree in Molecular and Cellular Biology from COTE D’AZUR UNIVERITY by NGUYEN Chinh Nghia Comprehensive Transcriptome Profiling of Root-knot Nematodes during Plant Infection and Characterisation of Species Specific Trait PhD directed by Dr Bruno FAVERY Defense on December 8th 2016 Jury composition : Pr. Pierre FRENDO Professeur, INRA UNS CNRS Sophia-Antipolis President Dr. Marc-Henri LEBRUN Directeur de Recherche, INRA AgroParis Tech Grignon Reporter Dr. Nemo PEETERS Directeur de Recherche, CNRS-INRA Castanet Tolosan Reporter Dr. Stéphane JOUANNIC Chargé de Recherche, IRD Montpellier Examinator Dr. Bruno FAVERY Directeur de Recherche, UNS CNRS Sophia-Antipolis PhD Director Résumé Les nématodes à galles du genre Meloidogyne spp. -
Exotic Nematodes of Grains CP
INDUSTRY BIOSECURITY PLAN FOR THE GRAINS INDUSTRY Generic Contingency Plan Exotic nematodes affecting the grains industry Specific examples detailed in this plan: Maize cyst nematode (Heterodera zeae), Soybean cyst nematode (Heterodera glycines) and Chickpea cyst nematode (Heterodera ciceri) Plant Health Australia August 2013 Disclaimer The scientific and technical content of this document is current to the date published and all efforts have been made to obtain relevant and published information on these pests. New information will be included as it becomes available, or when the document is reviewed. The material contained in this publication is produced for general information only. It is not intended as professional advice on any particular matter. No person should act or fail to act on the basis of any material contained in this publication without first obtaining specific, independent professional advice. Plant Health Australia and all persons acting for Plant Health Australia in preparing this publication, expressly disclaim all and any liability to any persons in respect of anything done by any such person in reliance, whether in whole or in part, on this publication. The views expressed in this publication are not necessarily those of Plant Health Australia. Further information For further information regarding this contingency plan, contact Plant Health Australia through the details below. Address: Level 1, 1 Phipps Close DEAKIN ACT 2600 Phone: +61 2 6215 7700 Fax: +61 2 6260 4321 Email: [email protected] Website: www.planthealthaustralia.com.au An electronic copy of this plan is available from the web site listed above. © Plant Health Australia Limited 2013 Copyright in this publication is owned by Plant Health Australia Limited, except when content has been provided by other contributors, in which case copyright may be owned by another person. -
JOURNAL of NEMATOLOGY Integrative Taxonomy, Distribution
JOURNAL OF NEMATOLOGY Article | DOI: 10.21307/jofnem-2021-015 e2021-15 | Vol. 53 Integrative taxonomy, distribution, and host associations of Geocenamus brevidens and Quinisulcius capitatus from southern Alberta, Canada Maria Munawar1, Dmytro P. 1, 2 Yevtushenko * and Pablo Castillo Abstract 1Department of Biological Sciences, University of Lethbridge, 4401 Two stunt nematode species, Geocenamus brevidens and University Drive W, Lethbridge, Quinisulcius capitatus, were recovered from the potato growing regions AB, T1K 3M4, Canada. of southern Alberta, described and characterized based on integrative taxonomy. Morphometrics, distribution, and host associations 2Institute for Sustainable of both species are discussed. The Canadian populations of both Agriculture (IAS), Spanish National species displayed minor variations in morphometrical characteristics Research Council (CSIC), Campus (viz., slightly longer bodies and tails) from the original descriptions. de Excelencia Internacional The populations of G. brevidens and Q. capitatus species examined Agroalimentario, ceiA3, Avenida in this study are proposed as standard and reference populations Menéndez Pidal s/n, 14004 for each respective species until topotype specimens become Córdoba, Spain. available and molecularly characterized. Phylogenetic analyses, *E-mail: dmytro.yevtushenko@ based on partial 18S, 28S, and ITS sequences, placed both species uleth.ca with related stunt nematode species. The present study updates the taxonomic records of G. brevidens and Q. capitatus from a This -
Studies on the Morphology and Bio-Ecology of Nematode Fauna of Rewa
STUDIES ON THE MORPHOLOGY AND BIO-ECOLOGY OF NEMATODE FAUNA OF REWA A TMESIS I SUBMITTED FOR THE DEGREE OF DOCTOR OF PHlLOSOPHy IN ZOOLOGY A. P. S. UNIVERSITY. REWA (M. P.) INDIA 1995 MY MANOJ KUMAR SINGH ZOOLOGICAL RESEARCH LAB GOVT. AUTONOMOUS MODEL SCIENCE COLLEGE REWA (M. P.) INDIA La u 4 # s^ ' T5642 - 7 OCT 2002 ^ Dr. C. B. Singh Department of Zoology M Sc, PhD Govt Model Science Coll Professor & Head Rewa(M P ) - 486 001 Ref Date 3^ '^-f^- ^'^ir CERTIFICATE Shri Manoj Kumar Singh, Research Scholar, Department of Zoology, Govt. Model Science College, Rewa has duly completed this thesis entitled "STUDIES ON THE MORPHOLOGY AND BIO-ECOLOGY OF NEMATODE FAUNA OF REWA" under my supervision and guidance He was registered for the degree of Philosophy in Zoology on Jan 11, 1993. Certified that - 1. The thesis embodies the work of the candidate himself 2. The candidate worked under my guidance for the period specified b\ A. P. S. University, Rewa. 3. The work is upto the standard, both from, itscontentsas well as literary presentation point of view. I feel pleasure in commendingthis work to university for the awaid of the degree. (Dr. Co. Singh) or^ra Guide Professor & Head of Zoology department Govt. Model Science College (Autonomous) Rewa (M.P.) DECLARATION The work embodied in this thesis is original and was conducted druing the peirod for Jan. 1993 to July 1995 at the Zoological Research Lab, Govt. Model Science College Rewa, (M.P.) to fulfil the requirement for the degree of Doctor of Philosophy in Zoology from A.P.S. -
Morphology and Ultrastructure of the Intestine in a Plant- Parasitic Nematode, Tylenchorhynchus Dubius
Morphology and Ultrastructure of the Intestine in a Plant- Parasitic Nematode, Tylenchorhynchus dubius J. R. BYERS and R. V. ANDERSON 1 Abstract: An unusual feature of the intestine in Tylenchorhynchus dubius is the presence, within the intestinal cytoplasm, of an extensive system of fibrillar bundles consisting of thin (14 nm diam) filaments and thick (70-90 nm diam), rod-like elements arranged in closely packed arrays. The larger of the fibrillar bundles, for which the term "intestinal fasciculi" is proposed, are evident in whole mounts and apparently correspond to the lateral or sinuous canals described in some other tylenchids. The nature and function of fasciculi are not known, but some poss~ilities are considered. Fasciculi were found in at least seven other species of Tylenchorhynchus. The intestinal cytoplasm also contains the usual sub cellular organelles and large amounts of reserve materials in the form of particulate glycogen and three types of globules. The surface of the cells bordering the lumen is elaborated into numerous microvilli which have central filaments and often bear regular external projections. Although terminal bars delimit the apical margins between cells, the frequent lack of complete lateral boundaries and extensive length of the fasciculi indicate that the intestinal epithelium is a multinucleate mosaic or syncytium. Although there are numerous descriptions intestine. Results from light microscopy were of the ultrastructure of the intestine in based on studies of whole mounts in glycerine, nematodes (see 5, 9, 12 for references), only a heat-relaxed specimens in water mounts and few have dealt with the intestine of plant semi-thin sections (0.5-1 pm). -
Plant-Parasitic Nematodes in Germany – an Annotated Checklist
86 (3) · December 2014 pp. 177–198 Plant-parasitic nematodes in Germany – an annotated checklist Dieter Sturhan Arnethstr. 13D, 48159 Münster, Germany, and c/o Julius Kühn-Institut, Toppheideweg 88, 48161 Münster, Germany E-mail: [email protected] Received 15 September 2014 | Accepted 28 October 2014 Published online at www.soil-organisms.de 1 December 2014 | Printed version 15 December 2014 Abstract A total of 268 phytonematode species indigenous in Germany or more recently introduced and established outdoors are listed. Their current taxonomic status and classification is given, which is not always in agreement with that applied in Fauna Europaea or recent publications. Recently used synonyms are included and comments on the species status are sometimes added. Species originally described from Germany are particularly marked, presence of types and other voucher specimens in the German Nematode Collection - Terrestrial Nematodes (DNST) is indicated; likewise potential occurrence or absence of species in field soil and similar cultivated land is noted. Species known from indoor plants and only occasionally observed outdoors are listed separately. Synonymies and species considered as species inquirendae are listed in case records refer to Germany; records and identifications considered as doubtful are also listed. In a separate section notes on a number of genera and species are added, taxonomic problems are indicated, and data on morphology, distribution and habitat of some recently discovered species and of still unidentified or undescribed species or populations are given. Longidorus macroteromucronatus is synonymised with L. poessneckensis. Paratrophurus striatus is transferred as T. casigo nom. nov., comb. nov. to the genus Tylenchorhynchus. Neotypes of Merlinius bavaricus and Bursaphelenchus fraudulentus are designated.