General Characters of Fungi
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Fungi-Rhizopus
Characters of Fungi Some of the most important characters of fungi are as follows: 1. Occurrence 2. Thallus organization 3. Different forms of mycelium 4. Cell structure 5. Nutrition 6. Heterothallism and Homothallism 7. Reproduction 8. Classification of Fungi. 1. Occurrence: Fungi are cosmopolitan and occur in air, water soil and on plants and animals. They prefer to grow in warm and humid places. Hence, we keep food in the refrigerator to prevent bacterial and fungal infestation. 2. Thallus organization: Except some unicellular forms (e.g. yeasts, Synchytrium), the fungal body is a thallus called mycelium. The mycelium is an interwoven mass of thread-like hyphae (Sing, hypha). Hyphae may be septate (with cross wall) and aseptate (without cross wall). Some fungi are dimorphic that found as both unicellular and mycelial forms e.g. Candida albicans. 3. Different forms of mycelium: (a) Plectenchyma (fungal tissue): In a fungal mycelium, hyphae organized loosely or compactly woven to form a tissue called plectenchyma. It is two types: i. Prosenchyma or Prosoplectenchyma: In these fungal tissue hyphae are loosely interwoven lying more or less parallel to each other. ii. Pseudoparenchyma or paraplectenchyma: In these fungal tissue hyphae are compactly interwoven looking like a parenchyma in cross-section. (b) Sclerotia (Gr. Skleros=haid): These are hard dormant bodies consist of compact hyphae protected by external thickened hyphae. Each Sclerotium germinates into a mycelium, on return of favourable condition, e.g., Penicillium. (c) Rhizomorphs: They are root-like compactly interwoven hyphae with distinct growing tip. They help in absorption and perennation (to tide over the unfavourable periods), e.g., Armillaria mellea. -
Classifications of Fungi
Chapter 24 | Fungi 675 Sexual Reproduction Sexual reproduction introduces genetic variation into a population of fungi. In fungi, sexual reproduction often occurs in response to adverse environmental conditions. During sexual reproduction, two mating types are produced. When both mating types are present in the same mycelium, it is called homothallic, or self-fertile. Heterothallic mycelia require two different, but compatible, mycelia to reproduce sexually. Although there are many variations in fungal sexual reproduction, all include the following three stages (Figure 24.8). First, during plasmogamy (literally, “marriage or union of cytoplasm”), two haploid cells fuse, leading to a dikaryotic stage where two haploid nuclei coexist in a single cell. During karyogamy (“nuclear marriage”), the haploid nuclei fuse to form a diploid zygote nucleus. Finally, meiosis takes place in the gametangia (singular, gametangium) organs, in which gametes of different mating types are generated. At this stage, spores are disseminated into the environment. Review the characteristics of fungi by visiting this interactive site (http://openstaxcollege.org/l/ fungi_kingdom) from Wisconsin-online. 24.2 | Classifications of Fungi By the end of this section, you will be able to do the following: • Identify fungi and place them into the five major phyla according to current classification • Describe each phylum in terms of major representative species and patterns of reproduction The kingdom Fungi contains five major phyla that were established according to their mode of sexual reproduction or using molecular data. Polyphyletic, unrelated fungi that reproduce without a sexual cycle, were once placed for convenience in a sixth group, the Deuteromycota, called a “form phylum,” because superficially they appeared to be similar. -
Division II: Eumycota Subdivision: Mastigomycotina, Class: Chytridiomycetes (Chytridiales), Oomycetes (Peronosporales)
Division II: Eumycota Subdivision: Mastigomycotina, class: Chytridiomycetes (Chytridiales), Oomycetes (Peronosporales) General characters Members of the class Oomycetes are mostly aquatic but some are facultative or obligate parasites of vascular plants. Majority of them are with filamentous hyaline coenocytic mycelium. Cell wall contains cellulose. They produce asexual spores called zoospores. Oospore is the sexual spores. Class: Oomycetes Zoospores biflagellate (posterior flagellum whiplash-type; anterior tinsel-type); cell wall cellulosic. 1. Members of the class comycetes are mostly aquatic but some are facultative or obligate parasites of vascular plants. 2. They are distinguished by the presence of well-developed holocarpic or eucarpic mycelium or rhizomycelium and zoospores bearing two flagella, one whiplash type and the other tinsel type. In some members, Zoospores are not formed and the zoosporangia function as conidia. The cell wall does not contain chitin, small amounts of cellulose are detected but the principal components are glucans. 3. In sexual reproduction the union of antheridia and oogonia produces oospores. Order: Peronosporales This order includes highly economically important plant pathogens. The members cause downy mildew and white rust diseases. Hyphae are well developed and aseptate. Cell wall is composed of glucan-cellulose complex and hydroxyproline. Parasites produce haustoria, which may be knob-like, elongated or branched and are found within the host cells. Asexual reproduction is by well-defined sporangia. Sexual reproduction is by means of well- differentiated sex organs, antheridia (male) and oogonia (female). Oospores germinate directly or by producing a sporangium. Families Pythiaceae Sporangiophores similar to the vegetative hyphae or if different then of indeterminate growth. Pythiaceae contains genera like Pythium and Phytophthora Albuginaceae Sporangiophores strikingly different from vegetative hyphae, slender or thick, variously club-shaped, arranged in a layer, and bear sporangia in chain at the tip. -
Parasex Generates Phenotypic Diversity De Novo and Impacts Drug Resistance and Virulence in Candida Albicans
| INVESTIGATION Parasex Generates Phenotypic Diversity de Novo and Impacts Drug Resistance and Virulence in Candida albicans Matthew P. Hirakawa, Darius E. Chyou,1 Denis Huang,1 Aaron R. Slan,1 and Richard J. Bennett2 Department of Molecular Microbiology and Immunology, Brown University, Providence, Rhode Island 02912 ORCID ID: 0000-0001-7563-484X (R.J.B.) ABSTRACT Candida albicans is a diploid fungus that is a frequent cause of mucosal and systemic infections in humans. This species exhibits an unusual parasexual cycle in which mating produces tetraploid cells that undergo a nonmeiotic program of concerted chromosome loss to return to a diploid or aneuploid state. In this work, we used a multipronged approach to examine the capacity of parasex to generate diversity in C. albicans. First, we compared the phenotypic properties of 32 genotyped progeny and observed wide-ranging differences in fitness, filamentation, biofilm formation, and virulence. Strikingly, one parasexual isolate displayed in- creased virulence relative to parental strains using a Galleria mellonella model of infection, establishing that parasex has the potential to enhance pathogenic traits. Next, we examined parasexual progeny derived from homothallic, same-sex mating events, and reveal that parasex can generate diversity de novo from identical parental strains. Finally, we generated pools of parasexual progeny and examined resistance of these pools to environmental stresses. Parasexual progeny were generally less fit than control strains across most test conditions, but showed an increased ability to grow in the presence of the antifungal drug fluconazole (FL). FL-resistant progeny were aneuploid isolates, often being diploid strains trisomic for both Chr3 and Chr6. -
Lichens of Alaska's South Coast
United States Department of Agriculture Lichens of Alaska’s South Coast Forest Service R10-RG-190 Alaska Region Reprint April 2014 WHAT IS A LICHEN? Lichens are specialized fungi that “farm” algae as a food source. Unlike molds, mildews, and mushrooms that parasitize or scavenge food from other organisms, the fungus of a lichen cultivates tiny algae and / or blue-green bacteria (called cyanobacteria) within the fabric of interwoven fungal threads that form the body of the lichen (or thallus). The algae and cyanobacteria produce food for themselves and for the fungus by converting carbon dioxide and water into sugars using the sun’s energy (photosynthesis). Thus, a lichen is a combination of two or sometimes three organisms living together. Perhaps the most important contribution of the fungus is to provide a protective habitat for the algae or cyanobacteria. The green or blue-green photosynthetic layer is often visible between two white fungal layers if a piece of lichen thallus is torn off. Most lichen-forming fungi cannot exist without the photosynthetic partner because they have become dependent on them for survival. But in all cases, a fungus looks quite different in the lichenized form compared to its free-living form. HOW DO LICHENS REPRODUCE? Lichens sexually reproduce with fruiting bodies of various shapes and colors that can often look like miniature mushrooms. These are called apothecia (Fig. 1) and contain spores that germinate and Figure 1. Apothecia, fruiting grow into the fungus. Each bodies fungus must find the right photosynthetic partner in order to become a lichen. Lichens reproduce asexually in several ways. -
Ordovician Land Plants and Fungi from Douglas Dam, Tennessee
PROOF The Palaeobotanist 68(2019): 1–33 The Palaeobotanist 68(2019): xxx–xxx 0031–0174/2019 0031–0174/2019 Ordovician land plants and fungi from Douglas Dam, Tennessee GREGORY J. RETALLACK Department of Earth Sciences, University of Oregon, Eugene, OR 97403, USA. *Email: gregr@uoregon. edu (Received 09 September, 2019; revised version accepted 15 December, 2019) ABSTRACT The Palaeobotanist 68(1–2): Retallack GJ 2019. Ordovician land plants and fungi from Douglas Dam, Tennessee. The Palaeobotanist 68(1–2): xxx–xxx. 1–33. Ordovician land plants have long been suspected from indirect evidence of fossil spores, plant fragments, carbon isotopic studies, and paleosols, but now can be visualized from plant compressions in a Middle Ordovician (Darriwilian or 460 Ma) sinkhole at Douglas Dam, Tennessee, U. S. A. Five bryophyte clades and two fungal clades are represented: hornwort (Casterlorum crispum, new form genus and species), liverwort (Cestites mirabilis Caster & Brooks), balloonwort (Janegraya sibylla, new form genus and species), peat moss (Dollyphyton boucotii, new form genus and species), harsh moss (Edwardsiphyton ovatum, new form genus and species), endomycorrhiza (Palaeoglomus strotheri, new species) and lichen (Prototaxites honeggeri, new species). The Douglas Dam Lagerstätte is a benchmark assemblage of early plants and fungi on land. Ordovician plant diversity now supports the idea that life on land had increased terrestrial weathering to induce the Great Ordovician Biodiversification Event in the sea and latest Ordovician (Hirnantian) -
Wood Decay Fungi in Landscape Trees
Pest Notes, Publication 74109 Revised August 2019 Integrated Pest Management for Home Gardeners and Landscape Professionals Wood Decay Fungi in Landscape Trees everal fungal diseases, sometimes called heart rots, Ssap rots, or canker rots, decay wood in tree trunks Figure 1. White rot of oak. and limbs (Figures 1 and 2). Under conditions favor- ing growth of specific rot fungi, extensive portions of the wood of living trees can decay in a relatively short time (i.e., months to years). Decay fungi reduce wood strength and may kill storage and conductive tissues in the sapwood. While most species of woody plants are subject to trunk and limb decay, older and weaker trees are most susceptible. DAMAGE Decay fungi destroy cell wall components; including cellulose, hemicellulose, and lignin, that make up the woody portion of a tree. Depending on the organism, decay fungi can destroy the living (sapwood) or the central core (heartwood) part of the tree. Decay isn’t always visible on the outside of the tree, except where the bark Figure 2. Heart brown rot in a conifer trunk. has been cut or injured, when a cavity is present, or when rot fungi produce reproductive structures. Wood decay can make trees hazardous, of wood weight can result in 70 to 90% as infected trunks and limbs become loss in wood strength. Many branches unable to support their own weight and that fall from trees appear sound, but fall, especially when stressed by wind, upon analysis, they were colonized by Authors: heavy rain, or other conditions. Decay wood decay organisms. -
The Role of Diatom Resting Spores in Pelagic–Benthic Coupling in the Southern Ocean
Biogeosciences, 15, 3071–3084, 2018 https://doi.org/10.5194/bg-15-3071-2018 © Author(s) 2018. This work is distributed under the Creative Commons Attribution 4.0 License. The role of diatom resting spores in pelagic–benthic coupling in the Southern Ocean Mathieu Rembauville1, Stéphane Blain1, Clara Manno2, Geraint Tarling2, Anu Thompson3, George Wolff3, and Ian Salter1,4 1Sorbonne Universités, UPMC Univ. Paris 06, CNRS, Laboratoire d’Océanographie Microbienne (LOMIC), Observatoire Océanologique, 66650 Banyuls-sur-mer, France 2British Antarctic Survey, Natural Environmental Research Council, High Cross, Madingley Road, Cambridge, CB3 0ET, UK 3School of Environmental Sciences, 4 Brownlow Street, University of Liverpool, Liverpool, L69 3GP, UK 4Faroe Marine Research Institute, Box 3051, 110, Torshavn, Faroe Islands Correspondence: Ian Salter ([email protected], [email protected]) Received: 5 October 2017 – Discussion started: 10 October 2017 Revised: 20 March 2018 – Accepted: 13 April 2018 – Published: 18 May 2018 Abstract. Natural iron fertilization downstream of Southern statistical framework to link seasonal variation in ecological Ocean island plateaus supports large phytoplankton blooms flux vectors and lipid composition over a complete annual and promotes carbon export from the mixed layer. In ad- cycle. Our analyses demonstrate that ecological processes in dition to sequestering atmospheric CO2, the biological car- the upper ocean, e.g. resting spore formation and grazing, not bon pump also supplies organic matter (OM) to deep-ocean only impact the magnitude and stoichiometry of the Southern ecosystems. Although the total flux of OM arriving at the Ocean biological pump, but also regulate the composition of seafloor sets the energy input to the system, the chemical exported OM and the nature of pelagic–benthic coupling. -
Polypore Diversity in North America with an Annotated Checklist
Mycol Progress (2016) 15:771–790 DOI 10.1007/s11557-016-1207-7 ORIGINAL ARTICLE Polypore diversity in North America with an annotated checklist Li-Wei Zhou1 & Karen K. Nakasone2 & Harold H. Burdsall Jr.2 & James Ginns3 & Josef Vlasák4 & Otto Miettinen5 & Viacheslav Spirin5 & Tuomo Niemelä 5 & Hai-Sheng Yuan1 & Shuang-Hui He6 & Bao-Kai Cui6 & Jia-Hui Xing6 & Yu-Cheng Dai6 Received: 20 May 2016 /Accepted: 9 June 2016 /Published online: 30 June 2016 # German Mycological Society and Springer-Verlag Berlin Heidelberg 2016 Abstract Profound changes to the taxonomy and classifica- 11 orders, while six other species from three genera have tion of polypores have occurred since the advent of molecular uncertain taxonomic position at the order level. Three orders, phylogenetics in the 1990s. The last major monograph of viz. Polyporales, Hymenochaetales and Russulales, accom- North American polypores was published by Gilbertson and modate most of polypore species (93.7 %) and genera Ryvarden in 1986–1987. In the intervening 30 years, new (88.8 %). We hope that this updated checklist will inspire species, new combinations, and new records of polypores future studies in the polypore mycota of North America and were reported from North America. As a result, an updated contribute to the diversity and systematics of polypores checklist of North American polypores is needed to reflect the worldwide. polypore diversity in there. We recognize 492 species of polypores from 146 genera in North America. Of these, 232 Keywords Basidiomycota . Phylogeny . Taxonomy . species are unchanged from Gilbertson and Ryvarden’smono- Wood-decaying fungus graph, and 175 species required name or authority changes. -
16. Plants.Pptx
2/27/11 Class announcements Simulation #3-#5 – Class results 1. Next Friday – HW5. Diffusion homework due. Available at GAE homeworks link 2. Next Friday’s GAE – bring 2 calculators for each circle 4 group. Particles past Concentration gradient = ΔC (Particle number) Δx (Distance of 4 circles) Fick’s First Law of Diffusion Simulation #6 – Class results ΔC area J = -D J Δx Not enough Δx e.g., a membrane data for 80 s J = flux (“diffusion rate”) D = diffusion coefficient ΔC = concentration difference Δx = distance € (Negative sign means down the gradient, but biologists often drop Two (of many) possibilities include: the sign.) 1) t is directly proportional to x (the plot of t vs. x is a straight line) 2) t is directly proportional to x squared (the plot is parabolic) 1 2/27/11 Movement of small diffusible molecules 2 Fick’s Second Law of Diffusion For example, glucose - 2 ∂C ∂ C ( x) = D molecular weight: 180 Da Δ 2 t = t x -6 2 ∂ ∂ diffusion coefficient: 7.0 x 10 cm /sec 2D Einstein’s solution - “time-to-diffuse equation” Distance (Δx) Time (t) Typical Structure 10 nm 100 ns Cell membrane 2 (Δx) 1 µm 1 ms Bacteria € t = 10 µm 100 ms€ Eukaryotic cell HELP ME, 2D 207! 300 µm 1.5 min Sea urchin embryo t = time 1 mm 16.6 min Volvox Δx = mean distance traveled D = diffusion coefficient 2 cm 4.6 days Human heart wall 10 cm 82.7 days Squid giant axon Adapted from www.npl.co.uk/educate-+-explore/beginners-guides-posters/einstein-and-blackboard€ The Evolution of Plants - They Made the Land Green The “easy” life of an aquatic alga • Bathed in nutrients -
A Higher-Level Phylogenetic Classification of the Fungi
mycological research 111 (2007) 509–547 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres A higher-level phylogenetic classification of the Fungi David S. HIBBETTa,*, Manfred BINDERa, Joseph F. BISCHOFFb, Meredith BLACKWELLc, Paul F. CANNONd, Ove E. ERIKSSONe, Sabine HUHNDORFf, Timothy JAMESg, Paul M. KIRKd, Robert LU¨ CKINGf, H. THORSTEN LUMBSCHf, Franc¸ois LUTZONIg, P. Brandon MATHENYa, David J. MCLAUGHLINh, Martha J. POWELLi, Scott REDHEAD j, Conrad L. SCHOCHk, Joseph W. SPATAFORAk, Joost A. STALPERSl, Rytas VILGALYSg, M. Catherine AIMEm, Andre´ APTROOTn, Robert BAUERo, Dominik BEGEROWp, Gerald L. BENNYq, Lisa A. CASTLEBURYm, Pedro W. CROUSl, Yu-Cheng DAIr, Walter GAMSl, David M. GEISERs, Gareth W. GRIFFITHt,Ce´cile GUEIDANg, David L. HAWKSWORTHu, Geir HESTMARKv, Kentaro HOSAKAw, Richard A. HUMBERx, Kevin D. HYDEy, Joseph E. IRONSIDEt, Urmas KO˜ LJALGz, Cletus P. KURTZMANaa, Karl-Henrik LARSSONab, Robert LICHTWARDTac, Joyce LONGCOREad, Jolanta MIA˛ DLIKOWSKAg, Andrew MILLERae, Jean-Marc MONCALVOaf, Sharon MOZLEY-STANDRIDGEag, Franz OBERWINKLERo, Erast PARMASTOah, Vale´rie REEBg, Jack D. ROGERSai, Claude ROUXaj, Leif RYVARDENak, Jose´ Paulo SAMPAIOal, Arthur SCHU¨ ßLERam, Junta SUGIYAMAan, R. Greg THORNao, Leif TIBELLap, Wendy A. UNTEREINERaq, Christopher WALKERar, Zheng WANGa, Alex WEIRas, Michael WEISSo, Merlin M. WHITEat, Katarina WINKAe, Yi-Jian YAOau, Ning ZHANGav aBiology Department, Clark University, Worcester, MA 01610, USA bNational Library of Medicine, National Center for Biotechnology Information, -
A New Species of Bird's Nest Fungi: Characterisation of <I>Cyathus Subglobisporus</I>
Persoonia 21, 2008: 71–76 www.persoonia.org RESEARCH ARTICLE doi:10.3767/003158508X370578 A new species of bird’s nest fungi: characterisation of Cyathus subglobisporus sp. nov. based on morphological and molecular data R.-L. Zhao1, D.E. Desjardin 2, K. Soytong 3, K.D. Hyde 4, 5* Key words Abstract Recent collections of bird’s nest fungi (i.e. Crucibulum, Cyathus, Mycocalia, Nidula, and Nidularia species) in northern Thailand resulted in the discovery of a new species of Cyathus, herein described as C. subglobisporus. bird’s nest fungi This species is distinct by a combination of ivory-coloured fruiting bodies covered with shaggy hairs, plications on gasteromycetes the inner surface of the peridium and subglobose basidiospores. Phylogenetic analyses based on ITS and LSU new species ribosomal DNA sequences using neighbour-joining, maximum likelihood and weighted maximum parsimony sup- phylogeny port Cyathus subglobisporus as a distinct species and sister to a clade containing C. annulatus, C. renweii and rDNA C. stercoreus in the Striatum group. Article info Received: 24 June 2008; Accepted: 8 September 2008; Published: 23 September 2008. INTRODUCTION Cyathus striatus as representatives of the Nidulariaceae. Their phylogenetic reconstruction indicated that the Nidulariaceae The genus Cyathus along with the genera Crucibulum, Myco- was sister to the Cystodermateae (represented by Cystoderma calia, Nidula, and Nidularia are known as the bird’s nest fungi amianthinum). Together these two clades appear sister to the because of their small vase-shaped or nest-like fruiting bodies Agaricaceae s.l. but without bootstrap support. A phylogenetic containing lentil-shaped or egg-like peridioles.