Vertebrate Phylogeny Continued O Evolution of the Tetrapods O Evolution of the Amniotes O Evolution of the Sauropsids O Evolution of the Synapsids
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Distributions of Extinction Times from Fossil Ages and Tree Topologies: the Example of Some Mid-Permian Synapsid Extinctions Gilles Didier, Michel Laurin
Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier, Michel Laurin To cite this version: Gilles Didier, Michel Laurin. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions. 2021. hal-03258099v2 HAL Id: hal-03258099 https://hal.archives-ouvertes.fr/hal-03258099v2 Preprint submitted on 20 Sep 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier1 and Michel Laurin2 1 IMAG, Univ Montpellier, CNRS, Montpellier, France 2 CR2P (\Centre de Pal´eontologie { Paris"; UMR 7207), CNRS/MNHN/SU, Mus´eumNational d'Histoire Naturelle, Paris, France September 16, 2021 Abstract Given a phylogenetic tree that includes only extinct, or a mix of extinct and extant taxa, where at least some fossil data are available, we present a method to compute the distribution of the extinction time of a given set of taxa under the Fossilized-Birth-Death model. Our approach differs from the previous ones in that it takes into account (i) the possibility that the taxa or the clade considered may diversify before going extinct and (ii) the whole phylogenetic tree to estimate extinction times, whilst previous methods do not consider the diversification process and deal with each branch independently. -
Osteological Connections of the Petrosal Bone of the Extant Hippopotamidae Hippopotamus Amphibius and Choeropsis Liberiensis Maeva Orliac, Franck Guy, Renaud Lebrun
Osteological connections of the petrosal bone of the extant Hippopotamidae Hippopotamus amphibius and Choeropsis liberiensis Maeva Orliac, Franck Guy, Renaud Lebrun To cite this version: Maeva Orliac, Franck Guy, Renaud Lebrun. Osteological connections of the petrosal bone of the extant Hippopotamidae Hippopotamus amphibius and Choeropsis liberiensis. MorphoMuseum, Association Palæovertebrata, 2014, 1 (1), pp.e1. 10.18563/m3.1.1.e1. hal-01902601 HAL Id: hal-01902601 https://hal.archives-ouvertes.fr/hal-01902601 Submitted on 26 Oct 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. ANATOMY ATLAS Osteological connections of the petrosal bone of the extant Hippopotamidae Hippopotamus amphibius and Choeropsis liberiensis ORLIAC M.J*, GUY F.†, LEBRUN R.* * Laboratoire de Paléontologie, Institut des Sciences de l’Évolution de Montpellier (ISE-M, UMR 5554, CNRS, UM2, IRD), c.c. 064, Université Montpellier 2, place Eugène Bataillon, F-34095 Montpellier Cedex 05, France † Université de Poitiers - UFR SFA, iPHEP UMR CNRS 7262, Bât B35 - TSA 51106, 6 rue Michel brunet, 86073, Poitiers Cedex 9, France Abstract: This project presents the osteological connections of the petrosal bone of the extant Hippopotamidae Hippopotamus amphibius and Choeropsis liberiensis by a virtual osteological dissection of the ear region. -
The Mammary Gland and Its Origin During Synapsid Evolution
P1: GMX Journal of Mammary Gland Biology and Neoplasia (JMGBN) pp749-jmgbn-460568 January 9, 2003 17:51 Style file version Nov. 07, 2000 Journal of Mammary Gland Biology and Neoplasia, Vol. 7, No. 3, July 2002 (C 2002) The Mammary Gland and Its Origin During Synapsid Evolution Olav T. Oftedal1 Lactation appears to be an ancient reproductive trait that predates the origin of mammals. The synapsid branch of the amniote tree that separated from other taxa in the Pennsylva- nian (>310 million years ago) evolved a glandular rather than scaled integument. Repeated radiations of synapsids produced a gradual accrual of mammalian features. The mammary gland apparently derives from an ancestral apocrine-like gland that was associated with hair follicles. This association is retained by monotreme mammary glands and is evident as ves- tigial mammary hair during early ontogenetic development of marsupials. The dense cluster of mammo-pilo-sebaceous units that open onto a nipple-less mammary patch in monotremes may reflect a structure that evolved to provide moisture and other constituents to permeable eggs. Mammary patch secretions were coopted to provide nutrients to hatchlings, but some constituents including lactose may have been secreted by ancestral apocrine-like glands in early synapsids. Advanced Triassic therapsids, such as cynodonts, almost certainly secreted complex, nutrient-rich milk, allowing a progressive decline in egg size and an increasingly altricial state of the young at hatching. This is indicated by the very small body size, presence of epipubic bones, and limited tooth replacement in advanced cynodonts and early mammali- aforms. Nipples that arose from the mammary patch rendered mammary hairs obsolete, while placental structures have allowed lactation to be truncated in living eutherians. -
Controle Cardiovascular Autonômico E Metabolismo Em Embriões De Lagartos (Reptilia; Lepidosauria)
UNIVERSIDADE ESTADUAL PAULISTA “JÚLIO DE MESQUITA FILHO” unesp INSTITUTO DE BIOCIÊNCIAS – RIO CLARO PROGRAMA DE PÓS-GRADUAÇÃO EM CIÊNCIAS BIOLÓGICAS ÁREA DE ZOOLOGIA (DOUTORADO) Controle cardiovascular autonômico e metabolismo em embriões de lagartos (Reptilia; Lepidosauria) MARINA RINCON SARTORI Tese apresentada ao Instituto de Biociências do Câmpus de Rio Claro, Universidade Estadual Paulista, como parte dos requisitos para obtenção do título de Doutora em Ciências Biológicas (Área de Zoologia). Setembro - 2016 Controle cardiovascular autonômico e metabolismo em embriões de lagartos (Reptilia; Lepidosauria) MARINA RINCON SARTORI Tese apresentada ao Instituto de Biociências do Câmpus de Rio Claro, Universidade Estadual Paulista, como parte dos requisitos para obtenção do título de Doutora em Ciências Biológicas (Área de Zoologia). Orientador: Augusto Shinya Abe Setembro - 2016 598.1 Sartori, Marina Rincon S251c Controle cardiovascular autonômico e metabolismo em embriões de lagartos (Reptilia; Lepidosauria) / Marina Rincon Sartori. - Rio Claro, 2016 141 f. : il., figs., gráfs., tabs., fots. Tese (doutorado) - Universidade Estadual Paulista, Instituto de Biociências de Rio Claro Orientador: Augusto Shinya Abe 1. Réptil. 2. Regulação cardiovascular. 3. Desenvolvimento embrionário. 4. Iguana. 5. Squamata. 6. Frequência cardíaca. I. Título. Ficha Catalográfica elaborada pela STATI - Biblioteca da UNESP Campus de Rio Claro/SP Agradecimentos Um doutorado se resume a anos de dedicação e aprendizado. Nesse período há um grande amadurecimento, pessoal e profissional. E não é possível chegar até o fim sem o apoio e suporte de diversas pessoas, tanto as diretamente quanto as indiretamente envolvidas. Muitas não serão citadas nesta breve seção de agradecimentos mas a todos os que compartilharam comigo muitos desses momentos gostaria de deixar o meu sentimento de gratidão. -
The Conservation Biology of Tortoises
The Conservation Biology of Tortoises Edited by Ian R. Swingland and Michael W. Klemens IUCN/SSC Tortoise and Freshwater Turtle Specialist Group and The Durrell Institute of Conservation and Ecology Occasional Papers of the IUCN Species Survival Commission (SSC) No. 5 IUCN—The World Conservation Union IUCN Species Survival Commission Role of the SSC 3. To cooperate with the World Conservation Monitoring Centre (WCMC) The Species Survival Commission (SSC) is IUCN's primary source of the in developing and evaluating a data base on the status of and trade in wild scientific and technical information required for the maintenance of biological flora and fauna, and to provide policy guidance to WCMC. diversity through the conservation of endangered and vulnerable species of 4. To provide advice, information, and expertise to the Secretariat of the fauna and flora, whilst recommending and promoting measures for their con- Convention on International Trade in Endangered Species of Wild Fauna servation, and for the management of other species of conservation concern. and Flora (CITES) and other international agreements affecting conser- Its objective is to mobilize action to prevent the extinction of species, sub- vation of species or biological diversity. species, and discrete populations of fauna and flora, thereby not only maintain- 5. To carry out specific tasks on behalf of the Union, including: ing biological diversity but improving the status of endangered and vulnerable species. • coordination of a programme of activities for the conservation of biological diversity within the framework of the IUCN Conserva- tion Programme. Objectives of the SSC • promotion of the maintenance of biological diversity by monitor- 1. -
Reptiles A. Cladistics 1. Many Groups of Organisms
Reptiles A. Cladistics 1. Many groups of organisms are “polyphyletic” a. This means that the group combines 2 or more lineages - example=fish 2. Cladistics follows only pure lineages going back in time - example Osteichthys B. Reptile Classifiecation - looks like a polyphyletic group 1. Dry skin - no loss of water through skin like amphibians 2. Aminotic egg - an egg that can survive on dry land - in contrast with the amphibian egg C. Mammals and Birds are derived from different lineages of reptiles (We will see below) D. Stem Reptiles 1. Different lineages based on the temporal region of their skulls - number of holes (or bars) a. These holes are necessary to accommodate large jaw muscles b. Anapsid Skull - no holes in temporal - jaws can move fast, but with little force 1. Muscles that move the jaw are small 2. There is no good paleotological evidence for the transition between amphibians and reptiles - no fossil intermediates a. Fossil amphibians have lots of dermal bones in skull b. Amphibians have no temporal openings in skull 1. (Aside) both fossil amphibians and primitive reptiles have a parietal “eye” that senses light and dark (“third” eye in middle of head) c. Reptile skull is higher than amphibian to accomodate larger jaw muscles d. Of the modern reptiles only turtles are anapsids 2. Diapsid Skull - has holes in the temporal region a. Diapsid reptiles gave rise to lizards and snakes - they have a diapsid skull 1. Also Tuatara, crocodiles, dinosaurs and pterydactyls Reptiles b. One group of diapsids also had a pre-orbital hole in the skull in front of eye - this hole is still preserved in the birds - this anatomy suggests strongly that the birds are derived from the diapsid reptiles 3. -
(Diapsida: Saurosphargidae), with Implications for the Morphological Diversity and Phylogeny of the Group
Geol. Mag.: page 1 of 21. c Cambridge University Press 2013 1 doi:10.1017/S001675681300023X A new species of Largocephalosaurus (Diapsida: Saurosphargidae), with implications for the morphological diversity and phylogeny of the group ∗ CHUN LI †, DA-YONG JIANG‡, LONG CHENG§, XIAO-CHUN WU†¶ & OLIVIER RIEPPEL ∗ Laboratory of Evolutionary Systematics of Vertebrates, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, PO Box 643, Beijing 100044, China ‡Department of Geology and Geological Museum, Peking University, Beijing 100871, PR China §Wuhan Institute of Geology and Mineral Resources, Wuhan, 430223, PR China ¶Canadian Museum of Nature, PO Box 3443, STN ‘D’, Ottawa, ON K1P 6P4, Canada Department of Geology, The Field Museum, 1400 S. Lake Shore Drive, Chicago, IL 60605-2496, USA (Received 31 July 2012; accepted 25 February 2013) Abstract – Largocephalosaurus polycarpon Cheng et al. 2012a was erected after the study of the skull and some parts of a skeleton and considered to be an eosauropterygian. Here we describe a new species of the genus, Largocephalosaurus qianensis, based on three specimens. The new species provides many anatomical details which were described only briefly or not at all in the type species, and clearly indicates that Largocephalosaurus is a saurosphargid. It differs from the type species mainly in having three premaxillary teeth, a very short retroarticular process, a large pineal foramen, two sacral vertebrae, and elongated small granular osteoderms mixed with some large ones along the lateral most side of the body. With additional information from the new species, we revise the diagnosis and the phylogenetic relationships of Largocephalosaurus and clarify a set of diagnostic features for the Saurosphargidae Li et al. -
The Ear in Mammal-Like Reptiles and Early Mammals
Acta Palaeontologica Polonica Vol. 28, No. 1-2 pp, 147-158 Warszawa, 1983 Second Symposium on Mesozoic T erre stial Ecosystems, Jadwisin 1981 KENNETH A. KERMACK and FRANCES MUSSETT THE EAR IN MAMMAL-LIKE REPTILES AND EARLY MAMMALS KERMACK, K . A. a nd MUSS ETT, F.: The ear in mammal-like r eptiles an d early mammals. Acta Palaeont. P olonica , 28, 1-2, 147-158, 1983. Th e early m embers of the Theropsida lacked a tympanic membrane. In the later theropslds, the Therapsid a, a tym p an ic membrane develop ed from thc skin on the lateral side of th e lower jaw. The tympanum is not homologous In the Therapsida and ' t he Sauropslda. The ther apsid ea r w as a poor receiver of airborne sound, both In hi gh frequency r esp onse and In the r ange of frequencies encompassed. With the radiation of the Sauropsida in the Triassic the large therapsids became extinct, the small therap si ds evolv ed In to the mammal s and became nocturnal. High frequency hearin g w as essen tial for the nocturn al mode of life; quadrate and arttcutar became diss ociated from the jaw hinge to become the m ammali an au di tory ossi cles . I n the Theria the cochlea became coil ed. The spiral cochlea could n ot have existed until there w as a middle ear w ith the n ec essary h ig h f re q uency r esp onse. This m ay n ot have been until the Cretace ous. -
A Small Lepidosauromorph Reptile from the Early Triassic of Poland
A SMALL LEPIDOSAUROMORPH REPTILE FROM THE EARLY TRIASSIC OF POLAND SUSAN E. EVANS and MAGDALENA BORSUK−BIAŁYNICKA Evans, S.E. and Borsuk−Białynicka, M. 2009. A small lepidosauromorph reptile from the Early Triassic of Poland. Palaeontologia Polonica 65, 179–202. The Early Triassic karst deposits of Czatkowice quarry near Kraków, southern Poland, has yielded a diversity of fish, amphibians and small reptiles. Two of these reptiles are lepido− sauromorphs, a group otherwise very poorly represented in the Triassic record. The smaller of them, Sophineta cracoviensis gen. et sp. n., is described here. In Sophineta the unspecial− ised vertebral column is associated with the fairly derived skull structure, including the tall facial process of the maxilla, reduced lacrimal, and pleurodonty, that all resemble those of early crown−group lepidosaurs rather then stem−taxa. Cladistic analysis places this new ge− nus as the sister group of Lepidosauria, displacing the relictual Middle Jurassic genus Marmoretta and bringing the origins of Lepidosauria closer to a realistic time frame. Key words: Reptilia, Lepidosauria, Triassic, phylogeny, Czatkowice, Poland. Susan E. Evans [[email protected]], Department of Cell and Developmental Biology, Uni− versity College London, Gower Street, London, WC1E 6BT, UK. Magdalena Borsuk−Białynicka [[email protected]], Institut Paleobiologii PAN, Twarda 51/55, PL−00−818 Warszawa, Poland. Received 8 March 2006, accepted 9 January 2007 180 SUSAN E. EVANS and MAGDALENA BORSUK−BIAŁYNICKA INTRODUCTION Amongst living reptiles, lepidosaurs (snakes, lizards, amphisbaenians, and tuatara) form the largest and most successful group with more than 7 000 widely distributed species. The two main lepidosaurian clades are Rhynchocephalia (the living Sphenodon and its extinct relatives) and Squamata (lizards, snakes and amphisbaenians). -
The Treeness of the Tree of Historical Trees of Life
RESEARCH ARTICLE The treeness of the tree of historical trees of life 1 2 3 1 Marie Fisler , CeÂdric CreÂmière , Pierre Darlu , Guillaume LecointreID * 1 UMR 7205 CNRS-MNHN-SU-EPHE « Institut de SysteÂmatique, Evolution et Biodiversite », deÂpartement « Origines & E volution », MuseÂum National d'Histoire Naturelle, Paris, France, 2 MuseÂe d'Histoire Naturelle du Havre, Place du vieux marcheÂ, Le Havre, France, 3 UMR 7206 CNRS-MNHN-UPD « Eco-anthropologie et Ethnobiologie », deÂpartement « Hommes, Nature et SocieÂteÂs », MuseÂum National d'Histoire Naturelle, Paris, France a1111111111 * [email protected] a1111111111 a1111111111 a1111111111 Abstract a1111111111 This paper compares and categorizes historical ideas about trees showing relationships among biological entities. The hierarchical structure of a tree is used to test the global con- sistency of similarities among these ideas; in other words we assess the ªtreenessº of the OPEN ACCESS tree of historical trees. The collected data are figures and ideas about trees showing rela- Citation: Fisler M, CreÂmière C, Darlu P, Lecointre G tionships among biological entities published or drawn by naturalists from 1555 to 2012. (2020) The treeness of the tree of historical trees of They are coded into a matrix of 235 historical trees and 141 descriptive attributes. From the life. PLoS ONE 15(1): e0226567. https://doi.org/ most parsimonious ªtreeº of historical trees, treeness is measured by consistency index, 10.1371/journal.pone.0226567 retention index and homoplasy excess ratio. This tree is used to create sets or categories of Editor: Marc Robinson-Rechavi, Universite de trees, or to study the circulation of ideas. From an unrooted network of historical trees, tree- Lausanne Faculte de biologie et medecine, ness is measured by the delta-score. -
The Skull O Neurocranium, Form and Function O Dermatocranium, Form
Lesson 15 ◊ Lesson Outline: ♦ The Skull o Neurocranium, Form and Function o Dermatocranium, Form and Function o Splanchnocranium, Form and Function • Evolution and Design of Jaws • Fate of the Splanchnocranium ♦ Trends ◊ Objectives: At the end of this lesson, you should be able to: ♦ Describe the structure and function of the neurocranium ♦ Describe the structure and function of the dermatocranium ♦ Describe the origin of the splanchnocranium and discuss the various structures that have evolved from it. ♦ Describe the structure and function of the various structures that have been derived from the splanchnocranium ♦ Discuss various types of jaw suspension and the significance of the differences in each type ◊ References: ♦ Chapter: 9: 162-198 ◊ Reading for Next Lesson: ♦ Chapter: 9: 162-198 The Skull: From an anatomical perspective, the skull is composed of three parts based on the origins of the various components that make up the final product. These are the: Neurocranium (Chondocranium) Dermatocranium Splanchnocranium Each part is distinguished by its ontogenetic and phylogenetic origins although all three work together to produce the skull. The first two are considered part of the Cranial Skeleton. The latter is considered as a separate Visceral Skeleton in our textbook. Many other morphologists include the visceral skeleton as part of the cranial skeleton. This is a complex group of elements that are derived from the ancestral skeleton of the branchial arches and that ultimately gives rise to the jaws and the skeleton of the gill -
Clades™ Prehistoric Card Game a Clade Is a Section of the Evolutionary Family Tree—Basically Any Branch, Including All Its Sub-Branches
CLADES™ PREHISTORIC Card Game A clade is a section of the evolutionary family tree —basically any branch, including all its sub-branches. A clade is a family of organisms, or living things, that are all more closely related to each other than they are to any other organisms. In this game you match cards according to their clades. Contents: Deck of 83 Clades Prehistoric cards. Includes 27 cards of each color and 2 bonus cards. There are also 5 animal description cards not used in play. Object: Spot matching card triples to collect the biggest animal pile! Setup Deal 1 face-down card to each player as their personal card. For now, players keep these cards face-down and don’t look at them. Deal 12 face-down shared cards to the middle of the play area. If you’re learning or teaching the game: • Before dealing, set aside the bonus cards and the cards showing only one or two animals. Play with just the cards showing three animals. • Deal 7 shared cards instead of 12. CLADESPrehistoricRules2.indd 1 10/17/17 10:15 AM All players help flip the 12 shared cards face-up. Sort the cards into three Making Triples rows according to their clades: top for Mammalia (mammals), middle for Sauropsida (sauropsids, or reptiles and birds), and bottom for Arthropoda In Clades Prehistoric, any two cards can make a triple with exactly one other (arthropods, or “bugs”). When the table is ready, each player picks up their card in the deck. personal card and looks at it.