Evolution of Limblessness
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Molecular Phylogenetic Estimates of Evolutionary Affinities and the First
PRIMARY RESEARCH PAPER | Philippine Journal of Systematic Biology DOI 10.26757/pjsb2020b14002 Molecular phylogenetic estimates of evolutionary affinities and the first reports of phenotypic variation in two secretive, endemic reptiles from the Romblon Island Group, central Philippines Camila G. Meneses1,2,*, Cameron D. Siler3,4, Juan Carlos T. Gonzalez1,2, Perry L. Wood, Jr.5,6, and Rafe M. Brown6 Abstract We report on the first molecular estimates of phylogenetic relationships of Brachymeles dalawangdaliri (Scincidae) and Pseudogekko isapa (Gekkonidae), and present new data on phenotypic variation in these two poorly known taxa, endemic to the Romblon Island Group of the central Philippines. Because both species were recently described on the basis of few, relatively older, museum specimens collected in the early 1970s (when preservation of genetic material was not yet standard practice in biodiversity field inventories), neither taxon has ever been included in modern molecular phylogenetic analyses. Likewise, because the original type series for each species consisted of only a few specimens, biologists have been unable to assess standard morphological variation in either taxon, or statistically assess the importance of characters contributing to their diagnoses and identification. Here we ameliorate both historical shortfalls. First, our new genetic data allowed us to perform novel molecular phylogenetic analyses aimed at elucidating the evolutionary relationships of these lineages; secondly, with population level phenotypic data, from the first statistical sample collected for either species, and including adults of both sexes. We reaffirm the distinctiveness of both named taxa as valid species, amend their diagnoses to facilitate the recognition of both, distinguish them from congeners, and consider the biogeographic affinities of both lineages. -
Zootaxa, a New Genus and Species of Eyelid-Less And
Zootaxa 1873: 50–60 (2008) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2008 · Magnolia Press ISSN 1175-5334 (online edition) A new genus and species of eyelid-less and limb reduced gymnophthalmid lizard from northeastern Brazil (Squamata, Gymnophthalmidae) MIGUEL TREFAUT RODRIGUES1 & EDNILZA MARANHÃO DOS SANTOS2 1Universidade de São Paulo, Instituto de Biociências, Departamento de Zoologia, Caixa Postal 11.461, CEP 05422-970, São Paulo, Brazil. E-mail: [email protected] 2Universidade Federal Rural de Pernambuco, Unidade Acadêmica de Serra Talhada, Departamento de Biologia, Fazenda Saco, s/n, Serra Talhada, Pernambuco, Brazil. E-mail: [email protected] Abstract Scriptosaura catimbau, a new genus and species of elongate, fossorial, sand swimming eyelid-less gymnophthalmid li- zard is described on the basis of specimens obtained at Fazenda Porto Seguro, municipality of Buíque, State of Pernam- buco, in the Caatingas of northeastern Brazil. The type locality is entirely included within the area of the recently created Parque Nacional do Catimbau. The new lizard lacks external forelimbs, has rudimentary styliform hindlimbs and is fur- ther characterized by the absence of prefrontal, frontal, frontoparietal and supraocular scales, and by having one pair of chin shields. A member of the Gymnophthalmini radiation, the new genus is considered to be sister to Calyptommatus from which it differs externally by the absence of an ocular scale and absence of an enlarged temporal scale. Key words: Scriptosaura catimbau, new genus, Gymnophthalmidae, taxonomy, Catimbau Nacional Park, Pernambuco State, Brazil, Caatingas Resumo Scriptosaura catimbau, um novo gênero e espécie arenícola de lagarto gimnoftalmídeo fossorial com corpo alongado e sem pálpebra é descrito com base em espécimes obtidos na Fazenda Porto Seguro, município de Buíque, estado de Per- nambuco, nas Caatingas do nordeste brasileiro. -
USF Board of Trustees ( March 7, 2013)
Agenda item: (to be completed by Board staff) USF Board of Trustees ( March 7, 2013) Issue: Proposed Ph.D. in Integrative Biology ________________________________________________________________ Proposed action: New Degree Program Approval ________________________________________________________________ Background information: This application for a new Ph.D is driven by a recent reorganization of the Department of Biology. The reorganization began in 2006 and was completed in 2009. The reorganization of the Department of Biology, in part, reflected the enormity of the biological sciences, and in part, different research perspectives and directions taken by the faculty in each of the respective areas of biology. Part of the reorganization was to replace the original Ph.D. in Biology with two new doctoral degrees that better serve the needs of the State and our current graduate students by enabling greater focus of the research performed to earn the Ph.D. The well-established and highly productive faculty attracts students to the Tampa Campus from all over the United States as well as from foreign countries. The resources to support the two Ph.D. programs have already been established in the Department of Biology and are sufficient to support the two new degree programs. The reorganization created two new departments; the Department of Cell Biology, Microbiology, and Molecular Biology (CMMB) and the Department of Integrative Biology (IB). This proposal addresses the creation of a new Ph.D., in Integrative Biology offered by the Department of Integrative Biology (CIP Code 26.1399). The name of the Department, Integrative Biology, reflects the belief that the study of biological processes and systems can best be accomplished by the incorporation of numerous integrated approaches Strategic Goal(s) Item Supports: The proposed program directly supports the following: Goal 1 and Goal 2 Workgroup Review: ACE March 7, 2013 Supporting Documentation: See Complete Proposal below Prepared by: Dr. -
Snakes of the Siwalik Group (Miocene of Pakistan): Systematics and Relationship to Environmental Change
Palaeontologia Electronica http://palaeo-electronica.org SNAKES OF THE SIWALIK GROUP (MIOCENE OF PAKISTAN): SYSTEMATICS AND RELATIONSHIP TO ENVIRONMENTAL CHANGE Jason J. Head ABSTRACT The lower and middle Siwalik Group of the Potwar Plateau, Pakistan (Miocene, approximately 18 to 3.5 Ma) is a continuous fluvial sequence that preserves a dense fossil record of snakes. The record consists of approximately 1,500 vertebrae derived from surface-collection and screen-washing of bulk matrix. This record represents 12 identifiable taxa and morphotypes, including Python sp., Acrochordus dehmi, Ganso- phis potwarensis gen. et sp. nov., Bungarus sp., Chotaophis padhriensis, gen. et sp. nov., and Sivaophis downsi gen. et sp. nov. The record is dominated by Acrochordus dehmi, a fully-aquatic taxon, but diversity increases among terrestrial and semi-aquatic taxa beginning at approximately 10 Ma, roughly coeval with proxy data indicating the inception of the Asian monsoons and increasing seasonality on the Potwar Plateau. Taxonomic differences between the Siwalik Group and coeval European faunas indi- cate that South Asia was a distinct biogeographic theater from Europe by the middle Miocene. Differences between the Siwalik Group and extant snake faunas indicate sig- nificant environmental changes on the Plateau after the last fossil snake occurrences in the Siwalik section. Jason J. Head. Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, P.O. Box 37012, Washington, DC 20013-7012, USA. [email protected] School of Biological Sciences, Queen Mary, University of London, London, E1 4NS, United Kingdom. KEY WORDS: Snakes, faunal change, Siwalik Group, Miocene, Acrochordus. PE Article Number: 8.1.18A Copyright: Society of Vertebrate Paleontology May 2005 Submission: 3 August 2004. -
The First Miocene Fossils of Lacerta Cf. Trilineata (Squamata, Lacertidae) with A
bioRxiv preprint doi: https://doi.org/10.1101/612572; this version posted April 17, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. The first Miocene fossils of Lacerta cf. trilineata (Squamata, Lacertidae) with a comparative study of the main cranial osteological differences in green lizards and their relatives Andrej Čerňanský1,* and Elena V. Syromyatnikova2, 3 1Department of Ecology, Laboratory of Evolutionary Biology, Faculty of Natural Sciences, Comenius University in Bratislava, Mlynská dolina, 84215, Bratislava, Slovakia 2Borissiak Paleontological Institute, Russian Academy of Sciences, Profsoyuznaya 123, 117997 Moscow, Russia 3Zoological Institute, Russian Academy of Sciences, Universitetskaya nab., 1, St. Petersburg, 199034 Russia * Email: [email protected] Running Head: Green lizard from the Miocene of Russia Abstract We here describe the first fossil remains of a green lizardof the Lacerta group from the late Miocene (MN 13) of the Solnechnodolsk locality in southern European Russia. This region of Europe is crucial for our understanding of the paleobiogeography and evolution of these middle-sized lizards. Although this clade has a broad geographical distribution across the continent today, its presence in the fossil record has only rarely been reported. In contrast to that, the material described here is abundant, consists of a premaxilla, maxillae, frontals, bioRxiv preprint doi: https://doi.org/10.1101/612572; this version posted April 17, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
Ecology and Behaviour of Burton's Legless Lizard (Lialis Burtonis, Pygopodidae) in Tropical Australia
Asian Herpetological Research 2013, 4(1): 9–21 DOI: 10.3724/SP.J.1245.2013.00009 Ecology and Behaviour of Burton’s Legless Lizard (Lialis burtonis, Pygopodidae) in Tropical Australia Michael WALL1, 2 and Richard SHINE1* 1 School of Biological Sciences A08, University of Sydney, NSW 2006, Australia 2 Current address: 4940 Anza St. No. 4, San Francisco, CA 94121, USA Abstract The elongate, functionally limbless flap-footed lizards (family Pygopodidae) are found throughout Australia, ranging into southern New Guinea. Despite their diversity and abundance in most Australian ecosystems, pygopodids have attracted little scientific study. An intensive ecological study of one pygopodid, Burton’s legless lizard (Lialis burtonis Gray 1835), was conducted in Australia’s tropical Northern Territory. L. burtonis eats nothing but other lizards, primarily skinks, and appears to feed relatively infrequently (only 20.8% of stomachs contained prey). Ovulation and mating occur chiefly in the late dry-season (beginning around September), and most egg-laying takes place in the early to middle wet-season (November–January). Females can lay multiple clutches per year, some of which may be fertilised with stored sperm. Free-ranging L. burtonis are sedentary ambush foragers, with radio-tracked lizards moving on average < 5 m/day. Most foraging is done diurnally, but lizards may be active at any time of day or night. Radiotracked lizards were usually found in leaf-litter microhabitats, a preference that was also evident in habitat-choice experiments using field enclosures. Lizards typically buried themselves in 6–8 cm of litter; at this depth, they detect potential prey items while staying hidden from predators and prey and avoiding lethally high temperatures. -
Anfibios Y Reptiles 1 Keiner Meza-Tilvez1,2, Adolfo Mulet-Paso1,2 & Ronald Zambrano-Cantillo1 1Universidad De Cartagena & 2Fauna Silvestre Fundación
Fauna del Jardín Botánico “Guillermo Piñeres” de Cartagena, Turbaco, COLOMBIA Anfibios y Reptiles 1 Keiner Meza-Tilvez1,2, Adolfo Mulet-Paso1,2 & Ronald Zambrano-Cantillo1 1 2 Universidad de Cartagena & Fauna Silvestre Fundación Fotos: Adolfo Mulet Paso (AMP) – Hugo Claessen (HC) – Jairo H. Maldonado (JHM) – Jesús Torres Meza (JTM) – José Luis Pérez-González (JPG) – Jose Luna (JL) – Keiner Meza-Tilvez (KMT) – Luis Alberto Rueda Solano (LRS) – Mauricio Rivera Correa (MRC) – Juan Salvador Mendoza (JSM). © Jardín Botánico de Cartagena “Guillermo Piñeres” [[email protected]] Macho = (M), Hembra = (H) y Juvenil = (Juv.) [fieldguides.fieldmuseum.org] [1097] versión 1 12/2018 1 Rhinella horribilis 2 Rhinella humboldti 3 Dendrobates truncatus 4 Boana pugnax BUFONIDAE (foto KMT) BUFONIDAE (foto KMT) DENDROBATIDAE (foto KMT) HYLIDAE (foto KMT) 5 Boana xerophylla 6 Dendropsophus microcephalus 7 Scarthyla vigilans 8 Scinax rostratus HYLIDAE (foto LRS) HYLIDAE (foto KMT) HYLIDAE (foto KMT) HYLIDAE (foto KMT) 9 Scinax ruber 10 Trachycephalus typhonius 11 Engystomops pustulosus 12 Leptodactylus fragilis HYLIDAE (foto KMT) HYLIDAE (foto KMT) LEPTODACTYLIDAE (foto KMT) LEPTODACTYLIDAE (foto LRS) 13 Leptodactylus insularum 14 Pleurodema brachyops 15 Elachistocleis pearsei 16 Agalychnis callidryas LEPTODACTYLIDAE (foto AMP) LEPTODACTYLIDAE (foto KMT) MICROHYLIDAE (foto MRC) PHYLLOMEDUSIDAE (foto HC) 17 Phyllomedusa venusta 18 Basiliscus basiliscus (M) 19 Basiliscus basiliscus (Juv.) 20 Anolis auratus PHYLLOMEDUSIDAE (foto AMP) CORYTOPHANIDAE (foto KMT) CORYTOPHANIDAE (foto AMP) DACTYLOIDAE (foto AMP) Fauna del Jardín Botánico “Guillermo Piñeres” de Cartagena, Turbaco, COLOMBIA Anfibios y Reptiles 2 Keiner Meza-Tilvez1,2, Adolfo Mulet-Paso1,2 & Ronald Zambrano-Cantillo1 1 2 Universidad de Cartagena & Fauna Silvestre Fundación Fotos: Adolfo Mulet Paso (AMP) – Hugo Claessen (HC) – Jairo H. -
Do Worm Lizards Occur in Nebraska? Louis A
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Papers in Herpetology Papers in the Biological Sciences 1993 Do Worm Lizards Occur in Nebraska? Louis A. Somma Florida State Collection of Arthropods, [email protected] Follow this and additional works at: http://digitalcommons.unl.edu/biosciherpetology Part of the Biodiversity Commons, and the Population Biology Commons Somma, Louis A., "Do Worm Lizards Occur in Nebraska?" (1993). Papers in Herpetology. 11. http://digitalcommons.unl.edu/biosciherpetology/11 This Article is brought to you for free and open access by the Papers in the Biological Sciences at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Papers in Herpetology by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. @ o /' number , ,... :S:' .' ,. '. 1'1'13 Do Mono Li ••rel,. Occur ill 1!I! ..br .... l< .. ? by Louis A. Somma Department of- Zoology University of Florida Gainesville, FL 32611 Amphisbaenids, or worm lizards, are a small enigmatic suborder of reptiles (containing 4 families; ca. 140 species) within the order Squamata, which include~ the more speciose lizards and snakes (Gans 1986). The name amphisbaenia is derived from the mythical Amphisbaena (Topsell 1608; Aldrovandi 1640), a two-headed beast (one head at each end), whose fantastical description may have been based, in part, upon actual observations of living worm lizards (Druce 1910). While most are limbless and worm-like in appearance, members of the family Bipedidae (containing the single genus Sipes) have two forelimbs located close to the head. This trait, and the lack of well-developed eyes, makes them look like two-legged worms. -
Froglog95 New Version Draft1.Indd
March 2011 Vol. 95 FrogLogwww.amphibians.org News from the herpetological community The new face of the ASG “Lost” Frogs Red List The global search Updating South comes to an end. Africas Red Where next? Lists. Page 1 FrogLog Vol. 95 | March 2011 | 1 2 | FrogLog Vol. 95 | March 2011 CONTENTS The Sierra Caral of Guatemala a refuge for endemic amphibians page 5 The Search for “Lost” Frogs page 12 Recent diversifi cation in old habitats: Molecules and morphology in the endangered frog, Craugastor uno page 17 Updating the IUCN Red List status of South African amphibians 6 Amphibians on the IUCN Red List: Developments and changes since the Global Amphibian Assessment 7 The forced closure of conservation work on Seychelles Sooglossidae 8 Alien amphibians challenge Darwin’s naturalization hypothesis 9 Is there a decline of amphibian richness in Bellanwila-Attidiya Sanctuary? 10 High prevalence of the amphibian chytrid pathogen in Gabon 11 Breeding-site selection by red-belly toads, Melanophryniscus stelzneri (Anura: Bufonidae), in Sierras of Córdoba, Argentina 11 Upcoming meetings 20 | Recent Publications 20 | Internships & Jobs 23 Funding Opportunities 22 | Author Instructions 24 | Current Authors 25 FrogLog Vol. 95 | March 2011 | 3 FrogLog Editorial elcome to the new-look FrogLog. It has been a busy few months Wfor the ASG! We have redesigned the look and feel of FrogLog ASG & EDITORIAL COMMITTEE along with our other media tools to better serve the needs of the ASG community. We hope that FrogLog will become a regular addition to James P. Collins your reading and a platform for sharing research, conservation stories, events, and opportunities. -
U.S. Fish & Wildlife Service June 14, 2016 Biological Opinion Revised
U.S. Fish & Wildlife Service June 14, 2016 Biological Opinion ON Revised Land and Resource Management Plan Amendment to increase Florida Scrub- Jay Management Areas on the Ocala National Forest (Amendment 12) Prepared by: U.S. Fish and Wildlife Service Jacksonville, Florida Biological Opinion U.S. Forest Service Southern Region FWS Log No. 04EF1000-2016-F-0215 2 The Service concurs with your determination that the effects from activities under the proposed amendment on the Florida bonamia, scrub buckwheat, and Lewton’s polygala are within the scope of effects described in the September 18, 1998 BA for the LRMP and evaluated in the Service’s 1998 Opinion. In addition, effects of implementing the LRMP (including the proposed amendment) on the scrub pigeon wings were recently disclosed in your Biological Assessment (BA) of Nov 24, 2015 were evaluated in the Service’s Opinion of December 17, 2015. Therefore, these plant species will not be addressed further in the amended Opinion below. This amended Opinion is based on information provided to the Service through a BA, telephone conversations, e-mails, field investigation notes, and other sources of information. A complete administrative record of this consultation is on file at the Jacksonville Ecological Services Office. Consultation History September 21, 1998: NFF initiated formal consultation on revision of the LRMP December 18, 1998: The Service provided a non-jeopardy combined Biological and Conference Opinion on the LRMP to NFF concluding formal consultation. From March 2014 to November of 2015, the Service and staff from the NFF supervisor’s office and ONF participated in several meetings and conference calls to discuss how to address Forest Service Section 7(a)(1) obligations under the Act and the proposed amendment to the NFF LRMP. -
Reptiles of the Wet Tropics
Reptiles of the Wet Tropics The concentration of endemic reptiles in the Wet Tropics is greater than in any other area of Australia. About 162 species of reptiles live in this region and 24 of these species live exclusively in the rainforest. Eighteen of them are found nowhere else in the world. Many lizards are closely related to species in New Guinea and South-East Asia. The ancestors of two of the resident geckos are thought to date back millions of years to the ancient super continent of Gondwana. PRICKLY FOREST SKINK - Gnypetoscincus queenlandiae Length to 17cm. This skink is distinguished by its very prickly back scales. It is very hard to see, as it is nocturnal and hides under rotting logs and is extremely heat sensitive. Located in the rainforest in the Wet Tropics only, from near Cooktown to west of Cardwell. RAINFOREST SKINK - Eulamprus tigrinus Length to 16cm. The body has irregular, broken black bars. They give birth to live young and feed on invertebrates. Predominantly arboreal, they bask in patches of sunlight in the rainforest and shelter in tree hollows at night. Apparently capable of producing a sharp squeak when handled or when fighting. It is rare and found only in rainforests from south of Cooktown to west of Cardwell. NORTHERN RED-THROATED SKINK - Carlia rubrigularis Length to 14cm. The sides of the neck are richly flushed with red in breeding males. Lays 1-2 eggs per clutch, sometimes communally. Forages for insects in leaf litter, fallen logs and tree buttresses. May also prey on small skinks and own species. -
Integrative and Comparative Biology Integrative and Comparative Biology, Volume 60, Number 1, Pp
Integrative and Comparative Biology Integrative and Comparative Biology, volume 60, number 1, pp. 190–201 doi:10.1093/icb/icaa015 Society for Integrative and Comparative Biology SYMPOSIUM Convergent Evolution of Elongate Forms in Craniates and of Locomotion in Elongate Squamate Reptiles Downloaded from https://academic.oup.com/icb/article-abstract/60/1/190/5813730 by Clark University user on 24 July 2020 Philip J. Bergmann ,* Sara D. W. Mann,* Gen Morinaga,1,*,† Elyse S. Freitas‡ and Cameron D. Siler‡ *Department of Biology, Clark University, Worcester, MA, USA; †Department of Integrative Biology, Oklahoma State University, Stillwater, OK, USA; ‡Department of Biology and Sam Noble Oklahoma Museum of Natural History, University of Oklahoma, Norman, OK, USA From the symposium “Long Limbless Locomotors: The Mechanics and Biology of Elongate, Limbless Vertebrate Locomotion” presented at the annual meeting of the Society for Integrative and Comparative Biology January 3–7, 2020 at Austin, Texas. 1E-mail: [email protected] Synopsis Elongate, snake- or eel-like, body forms have evolved convergently many times in most major lineages of vertebrates. Despite studies of various clades with elongate species, we still lack an understanding of their evolutionary dynamics and distribution on the vertebrate tree of life. We also do not know whether this convergence in body form coincides with convergence at other biological levels. Here, we present the first craniate-wide analysis of how many times elongate body forms have evolved, as well as rates of its evolution and reversion to a non-elongate form. We then focus on five convergently elongate squamate species and test if they converged in vertebral number and shape, as well as their locomotor performance and kinematics.