Marceda-Veiga 2012 Towards the Conservation Of
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Cenozoic Tectonic and Climatic Events in Southern Iberian Peninsula: Implications
Research paper Cenozoic tectonic and climatic events in southern Iberian Peninsula: implications for the evolutionary history of freshwater fish of the genus Squalius (Actinopterygii, Cyprinidae) Silvia Perea 1*, Marta Cobo-Simon2 and Ignacio Doadrio1 1 Biodiversity and Evolutionary Group. Museo Nacional de Ciencias Naturales, CSIC, C/ José Gutiérrez Abascal, 2. 28006, Madrid, Spain 2 National Center of Biotechnology, Systems Biology Department, C/ Darwin 3. 28049, Madrid, Spain. *Corresponding author: Silvia Perea; Tel.: +34 91 4111328; fax: +34 91 5645078. Museo Nacional de Ciencias Naturales, CSIC, Biodiversity and Evolutionary Group, C/ José Gutiérrez Abascal, 2. 28006, Madrid, Spain E-mail addresses: SP: [email protected] (Corresponding author) ID: [email protected] MCS: [email protected] 1 ABSTRACT Southern Iberian freshwater ecosystems located at the border between the European and African plates represent a tectonically complex region spanning several geological ages, from the uplifting of the Betic Mountains in the Serravalian-Tortonian periods to the present. This area has also been subjected to the influence of changing climate conditions since the Middle-Upper Pliocene when seasonal weather patterns were established. Consequently, the ichthyofauna of southern Iberia is an interesting model system for analyzing the influence of Cenozoic tectonic and climatic events on its evolutionary history. The cyprinids Squalius malacitanus and Squalius pyrenaicus are allopatrically distributed in southern Iberia and their evolutionary history may have been defined by Cenozoic tectonic and climatic events. We analyzed MT-CYB (510 specimens) and RAG1 (140 specimens) genes of both species to reconstruct phylogenetic relationships and to estimate divergence times and ancestral distribution ranges of the species and their populations. -
Iberian Cyprinids: Habitat Requirements and Vulnerabilities
Session 1 Cyprinid species: ecology and constraints Iberian cyprinids: habitat requirements and vulnerabilities 2nd Stakeholder Workshop – Iberia – Lisboa, Portugal 20.03.2019 Francisco Godinho Hidroerg 20/03/2018 Francisco Godinho 1 Setting the scene 22/03/2018 Francisco Godinho 2 Relatively small river catchmentsIberian fluvial systems Douro/Duero is the largest one, with 97 600 km2 Loire – 117 000 km2, Rhinne -185 000 km2, Vistula – 194 000 km2, Danube22/03/2018 – 817 000 km2, Volga –Francisco 1 380 Godinho 000 km2 3 Most Iberian rivers present a mediterranean hydrological regime (temporary rivers are common) Vascão river, a tributary of the Guadiana river 22/03/2018 Francisco Godinho 4 Cyprinidae are the characteristic fish taxa of Iberian fluvial ecosystems, occurring from mountain streams (up to 1000 m in altitude) to lowland rivers Natural lakes are rare in the Iberian Peninsula and most natural freshwater bodies are rivers and streams 22/03/2018 Francisco Godinho 5 Six fish-based river types have been distinguished in Portugal (INAG and AFN, 2012) Type 1 - Northern salmonid streams Type 2 - Northern salmonid–cyprinid trans. streams Type 3 - Northern-interior medium-sized cyprinid streams Type 4 - Northern-interior medium-sized cyprinid streams Type 5 - Southern medium-sized cyprinid streams Type 6 - Northern-coastal cyprinid streams With the exception of assemblages in small northern, high altitude streams, native cyprinids dominate most unaltered fish assemblages, showing a high sucess in the hidrological singular 22/03/2018 -
1 Serena Zaccara 2 Department of Theoretical and Applied
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Bournemouth University Research Online 1 Correspondence: 2 Serena Zaccara 3 Department of Theoretical and Applied Sciences, University of Insubria, Via J. H. 4 Dunant, 3 – 21100 – Varese (VA), Italy. 5 Phone: +39 0332 421422 6 E-mail: [email protected] 7 8 Morphologic and genetic variability in the Barbus fishes (Teleostei, Cyprinidae) of 9 Central Italy 10 11 12 ZACCARA SERENA1, QUADRONI SILVIA1, VANETTI ISABELLA1, CAROSI 13 ANTONELLA2, LA PORTA GIANANDREA2, CROSA GIUSEPPE1, BRITTON ROBERT 14 3, LORENZONI MASSIMO2 15 16 1Department of Theoretical and Applied Sciences, University of Insubria, Varese (VA) - 17 Italy 18 2Department of Chemistry, Biology and Biotechnology, University of Perugia, Perugia 19 (PG) - Italy 20 3Centre for Conservation Ecology and Environmental Change, Bournemouth University, 21 Poole, Dorset - UK 22 23 Running title: Barbels dispersion in central Italy 24 Zaccara et al. 25 Zaccara et al. 1 26 Zaccara, S. (2018) New patterns of morphologic and genetic variability of barbels 27 (Teleostei, Cyprinidae) in central Italy. Zoologica Scripta, 00, 000-000. 28 29 Abstract 30 31 Italian freshwaters are highly biodiverse, with species present including the native 32 fishes Barbus plebejus and Barbus tyberinus that are threatened by habitat alteration, 33 fish stocking and invasive fishes, especially European barbel Barbus barbus. In central 34 Italy, native fluvio-lacustrine barbels are mainly allopatric and so provide an excellent 35 natural system to evaluate the permeability of the Apennine Mountains. Here, the 36 morphologic and genetic distinctiveness was determined for 611 Barbus fishes collected 37 along the Padany-Venetian (Adriatic basins; PV) and Tuscany-Latium (Tyrrhenian 38 basins; TL) districts. -
Actinopterygii, Cyprinidae) En La Cuenca Del Mediterráneo Occidental
UNIVERSIDAD COMPLUTENSE DE MADRID FACULTAD DE CIENCIAS BIOLÓGICAS TESIS DOCTORAL Filogenia, filogeografía y evolución de Luciobarbus Heckel, 1843 (Actinopterygii, Cyprinidae) en la cuenca del Mediterráneo occidental MEMORIA PARA OPTAR AL GRADO DE DOCTOR PRESENTADA POR Miriam Casal López Director Ignacio Doadrio Villarejo Madrid, 2017 © Miriam Casal López, 2017 UNIVERSIDAD COMPLUTENSE DE MADRID Facultad de Ciencias Biológicas Departamento de Zoología y Antropología física Phylogeny, phylogeography and evolution of Luciobarbus Heckel, 1843, in the western Mediterranean Memoria presentada para optar al grado de Doctor por Miriam Casal López Bajo la dirección del Doctor Ignacio Doadrio Villarejo Madrid - Febrero 2017 Ignacio Doadrio Villarejo, Científico Titular del Museo Nacional de Ciencias Naturales – CSIC CERTIFICAN: Luciobarbus Que la presente memoria titulada ”Phylogeny, phylogeography and evolution of Heckel, 1843, in the western Mediterranean” que para optar al grado de Doctor presenta Miriam Casal López, ha sido realizada bajo mi dirección en el Departamento de Biodiversidad y Biología Evolutiva del Museo Nacional de Ciencias Naturales – CSIC (Madrid). Esta memoria está además adscrita académicamente al Departamento de Zoología y Antropología Física de la Facultad de Ciencias Biológicas de la Universidad Complutense de Madrid. Considerando que representa trabajo suficiente para constituir una Tesis Doctoral, autorizamos su presentación. Y para que así conste, firmamos el presente certificado, El director: Ignacio Doadrio Villarejo El doctorando: Miriam Casal López En Madrid, a XX de Febrero de 2017 El trabajo de esta Tesis Doctoral ha podido llevarse a cabo con la financiación de los proyectos del Ministerio de Ciencia e Innovación. Además, Miriam Casal López ha contado con una beca del Ministerio de Ciencia e Innovación. -
Guide to Monogenoidea of Freshwater Fish of Palaeartic and Amur Regions
GUIDE TO MONOGENOIDEA OF FRESHWATER FISH OF PALAEARTIC AND AMUR REGIONS O.N. PUGACHEV, P.I. GERASEV, A.V. GUSSEV, R. ERGENS, I. KHOTENOWSKY Scientific Editors P. GALLI O.N. PUGACHEV D. C. KRITSKY LEDIZIONI-LEDIPUBLISHING © Copyright 2009 Edizioni Ledizioni LediPublishing Via Alamanni 11 Milano http://www.ledipublishing.com e-mail: [email protected] First printed: January 2010 Cover by Ledizioni-Ledipublishing ISBN 978-88-95994-06-2 All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, transmitted or utilized in any form or by any means, electonical, mechanical, photocopying or oth- erwise, without permission in writing from the publisher. Front cover: /Dactylogyrus extensus,/ three dimensional image by G. Strona and P. Galli. 3 Introduction; 6 Class Monogenoidea A.V. Gussev; 8 Subclass Polyonchoinea; 15 Order Dactylogyridea A.V. Gussev, P.I. Gerasev, O.N. Pugachev; 15 Suborder Dactylogyrinea: 13 Family Dactylogyridae; 17 Subfamily Dactylogyrinae; 13 Genus Dactylogyrus; 20 Genus Pellucidhaptor; 265 Genus Dogielius; 269 Genus Bivaginogyrus; 274 Genus Markewitschiana; 275 Genus Acolpenteron; 277 Genus Pseudacolpenteron; 280 Family Ancyrocephalidae; 280 Subfamily Ancyrocephalinae; 282 Genus Ancyrocephalus; 282 Subfamily Ancylodiscoidinae; 306 Genus Ancylodiscoides; 307 Genus Thaparocleidus; 308 Genus Pseudancylodiscoides; 331 Genus Bychowskyella; 332 Order Capsalidea A.V. Gussev; 338 Family Capsalidae; 338 Genus Nitzschia; 338 Order Tetraonchidea O.N. Pugachev; 340 Family Tetraonchidae; 341 Genus Tetraonchus; 341 Genus Salmonchus; 345 Family Bothitrematidae; 359 Genus Bothitrema; 359 Order Gyrodactylidea R. Ergens, O.N. Pugachev, P.I. Gerasev; 359 Family Gyrodactylidae; 361 Subfamily Gyrodactylinae; 361 Genus Gyrodactylus; 362 Genus Paragyrodactylus; 456 Genus Gyrodactyloides; 456 Genus Laminiscus; 457 Subclass Oligonchoinea A.V. -
Squalius Valentinus)
Document downloaded from: http://hdl.handle.net/10251/102250 This paper must be cited as: The final publication is available at http://doi.org/10.1016/J.ECOINF.2017.10.008 Copyright Elsevier Additional Information 1 Revisiting probabilistic neural networks: a comparative study 2 with support vector machines and the microhabitat suitability 3 for the Eastern Iberian chub (Squalius valentinus) 4 5 Rafael Muñoz-Mas1*, Shinji Fukuda2, Javier Pórtoles3, Francisco Martínez-Capel1 6 1 Institut d’Investigació per a la Gestió Integrada de Zones Costaneres (IGIC), 7 Universitat Politècnica de València, C/ Paranimf 1 – Grau de Gandia 46730, País Valencià, 8 (Spain). 9 2 Institute of Agriculture, Tokyo University of Agriculture and Technology, Saiwai-cho 3-5-8, 10 Fuchu, Tokyo 183-8509, (Japan). 11 3 Fundación para la Investigación del Clima, C/ Tremps 11, Madrid 28040, (Spain). 12 13 *Correspondence to: Rafael Muñoz-Mas, e-mail: [email protected], voice: +34 14 622098521 15 16 Keywords 17 differential evolution 18 habitat suitability model 19 Iberian Peninsula 20 machine learning 21 partial dependence plot 1 22 species distribution model 23 24 Abstract 25 Probabilistic Neural Networks (PNNs) and Support Vector Machines (SVMs) are flexible 26 classification techniques suited to render trustworthy species distribution and habitat 27 suitability models. Although several alternatives to improve PNNs’ reliability and 28 performance and/or to reduce computational costs exist, PNNs are currently not well 29 recognised as SVMs because the SVMs were compared with standard PNNs. To rule out this 30 idea, the microhabitat suitability for the Eastern Iberian chub (Squalius valentinus Doadrio & 31 Carmona, 2006) was modelled with SVMs and four types of PNNs (homoscedastic, 32 heteroscedastic, cluster and enhanced PNNs); all of them optimised with differential 33 evolution. -
FAMILY Leuciscidae Bonaparte, 1835 - Chubs, Daces, True Minnows, Roaches, Shiners, Etc
FAMILY Leuciscidae Bonaparte, 1835 - chubs, daces, true minnows, roaches, shiners, etc. SUBFAMILY Leuciscinae Bonaparte, 1835 - chubs, daces, trueminnows [=Leuciscini, Scardinii, ?Brachyentri, ?Pachychilae, Chondrostomi, Alburini, Pogonichthyi, Abramiformes, ?Paralabeonini, Cochlognathi, Laviniae, Phoxini, Acanthobramae, Bramae, Aspii, Gardonini, Cochlobori, Coelophori, Epicysti, Mesocysti, Plagopterinae, Campostominae, Exoglossinae, Graodontinae, Acrochili, Orthodontes, Chrosomi, Hybognathi, Tiarogae, Luxili, Ericymbae, Phenacobii, Rhinichthyes, Ceratichthyes, Mylochili, Mylopharodontes, Peleci, Medinae, Pimephalinae, Notropinae, Pseudaspinini] GENUS Abramis Cuvier, 1816 - breams [=Brama K, Brama W, Brama B, Leucabramis, Sapa, Zopa] Species Abramis ballerus (Linnaeus, 1758) - ballerus bream [=farenus] Species Abramis brama (Linnaeus, 1758) - bream, freshwater bream, bronze bream [=argyreus, bergi, danubii, gehini, latus, major, melaenus, orientalis, sinegorensis, vetula, vulgaris] GENUS Acanthobrama Heckel, 1843 - bleaks [=Acanthalburnus, Culticula, Trachybrama] Species Acanthobrama centisquama Heckel, 1843 - Damascus bleak Species Acanthobrama hadiyahensis Coad, et al., 1983 - Hadiyah bleak Species Acanthobrama lissneri Tortonese, 1952 - Tiberias bleak [=oligolepis] Species Acanthobrama marmid Heckel, 1843 - marmid bleak [=arrhada, cupida, elata] Species Acanthobrama microlepis (De Filippi, 1863) - Kura bleak [=punctulatus] Species Acanthobrama orontis Berg, 1949 - Antioch bleak Species Acanthobrama persidis (Coad, 1981) - Shur bleak -
D.1.1 Guidance on Stream Barrier Surveying and Reporting. Part A: Locating, Surveying and Prioritising Mitigation Actions for Stream Barriers
Ref. Ares(2016)6721952 - 01/12/2016 D.1.1 Guidance on Stream Barrier Surveying and Reporting. Part A: Locating, Surveying and Prioritising Mitigation Actions for Stream Barriers. This is version 1.0 of Guidance on Stream Barrier Surveying and Reporting. Part A: Locating, Surveying and Prioritising Mitigation Actions for Stream Barriers. This document is a deliverable of the AMBER project, which has received funding from the European Union’s Horizon 2020 Programme for under Grant Agreement (GA) #689682. D1.1: Guidance on Stream Barrier Surveying and Reporting. Part A: Locating, Surveying and Prioritising Mitigation Actions for Stream Barriers. November, 2016. Author(s): James Kerr (SOTON), Andrew Vowles (SOTON), Jesse O’Hanley (IBK), Paul Kemp (SOTON) for The AMBER Consortium. November 2016 DISCLAIMER The opinion stated in this report reflects the opinion of the authors and not the opinion of the European Commission. All intellectual property rights are owned by the AMBER consortium members and are protected by the applicable laws. Except where otherwise specified, all document contents are: “©AMBER Project - All rights reserved”. Reproduction is not authorized without prior written agreement. The commercial use of any information contained in this document may require a license from the owner of that information. All AMBER consortium members are also committed to publish accurate and up to date information and take the greatest care to do so. However, the AMBER consortium members cannot accept liability for any inaccuracies or omissions nor do they accept liability for any direct, indirect, special, consequential or other losses or damages of any kind arising out of the use of this information. -
International Standardization of Common Names for Iberian Endemic Freshwater Fishes Pedro M
Limnetica, 28 (2): 189-202 (2009) Limnetica, 28 (2): x-xx (2008) c Asociacion´ Iberica´ de Limnolog´a, Madrid. Spain. ISSN: 0213-8409 International Standardization of Common Names for Iberian Endemic Freshwater Fishes Pedro M. Leunda1,∗, Benigno Elvira2, Filipe Ribeiro3,6, Rafael Miranda4, Javier Oscoz4,Maria Judite Alves5,6 and Maria Joao˜ Collares-Pereira5 1 GAVRN-Gestion´ Ambiental Viveros y Repoblaciones de Navarra S.A., C/ Padre Adoain 219 Bajo, 31015 Pam- plona/Iruna,˜ Navarra, Espana.˜ 2 Universidad Complutense de Madrid, Facultad de Biolog´a, Departamento de Zoolog´a y Antropolog´a F´sica, 28040 Madrid, Espana.˜ 3 Virginia Institute of Marine Science, School of Marine Science, Department of Fisheries Science, Gloucester Point, 23062 Virginia, USA. 4 Universidad de Navarra, Departamento de Zoolog´a y Ecolog´a, Apdo. Correos 177, 31008 Pamplona/Iruna,˜ Navarra, Espana.˜ 5 Universidade de Lisboa, Faculdade de Ciencias,ˆ Centro de Biologia Ambiental, Campo Grande, 1749-016 Lis- boa, Portugal. 6 Museu Nacional de Historia´ Natural, Universidade de Lisboa, Rua da Escola Politecnica´ 58, 1269-102 Lisboa, Portugal. 2 ∗ Corresponding author: [email protected] 2 Received: 8/10/08 Accepted: 22/5/09 ABSTRACT International Standardization of Common Names for Iberian Endemic Freshwater Fishes Iberian endemic freshwater shes do not have standardized common names in English, which is usually a cause of incon- veniences for authors when publishing for an international audience. With the aim to tackle this problem, an updated list of Iberian endemic freshwater sh species is presented with a reasoned proposition of a standard international designation along with Spanish and/or Portuguese common names adopted in the National Red Data Books. -
Phylogenetic Overview of the Genus Squalius (Actinopterygii, Cyprinidae) in the Iberian Peninsula, with Description of Two New Species
Phylogenetic overview of the genus Squalius (Actinopterygii, Cyprinidae) in the Iberian Peninsula, with description of two new species by Ignacio DOADRIO & José A. CARMONA (1) A B S T R A C T. - A more accurate assessment of the true diversity within the genus S q u a l i u s on the Iberian Peninsula was made using morphological and molecular characters. A phylogenetic analysis based on the complete sequence of the mito- chondrial cytochrome b gene was used to reveal monophyletic groups that had the sufficient evolutionary significance to be regarded as new species. On the basis of genetic and morphological characters, Mediterranean populations from eastern and southern Spain that, in the past, were included in Squalius pyre n a i c u s are herein described as two new species. S q u a l - ius valentinus sp. nov., the new eastern Spanish species, inhabits the Mijares, Turia, Júcar, Serpis, Bullent, Gorg o s , Guadalest, Monebre (Verde), and Vinalopo basins as well as the Albufera de Valencia Lagoon. It is distinguished from S . p y re n a i c u s by a combination of morphometric, meristic and genetic characters, such as a wide caudal peduncle, low num- ber of scales (8-9/35-39/3), large fourth and fifth infraorbital bones, pointed anterior process of the maxilla, frontal bone widen in the middle, large and narrow urohyal, robust lower branch of the pharyngeal bone. Divergence distances of the cytochrome b in S. valentinus sp. nov. are p = 0.021-0.032 with respect to S. -
Molecular and Morphological Phylogeny of Host-Specific
Benovics et al. Parasites Vectors (2021) 14:372 https://doi.org/10.1186/s13071-021-04863-7 Parasites & Vectors RESEARCH Open Access Molecular and morphological phylogeny of host-specifc Dactylogyrus parasites (Monogenea) sheds new light on the puzzling Middle Eastern origin of European and African lineages Michal Benovics1,2*, Farshad Nejat1, Asghar Abdoli3 and Andrea Šimková1 Abstract Background: Freshwater fauna of the Middle East encompass elements shared with three continents—Africa, Asia, and Europe—and the Middle East is, therefore, considered a historical geographic crossroad between these three regions. Even though various dispersion scenarios have been proposed to explain the current distribution of cyprinids in the peri-Mediterranean, all of them congruently suggest an Asian origin for this group. Herein, we investigated the proposed scenarios using monogenean parasites of the genus Dactylogyrus, which is host-specifc to cyprinoid fshes. Methods: A total of 48 Dactylogyrus species parasitizing cyprinids belonging to seven genera were used for molecu- lar phylogenetic reconstruction. Taxonomically important morphological features, i.e., sclerotized elements of the attachment organ, were further evaluated to resolve ambiguous relationships between individual phylogenetic lineages. For 37 species, sequences of partial genes coding 18S and 28S rRNA, and the ITS1 region were retrieved from GenBank. Ten Dactylogyrus species collected from Middle Eastern cyprinoids and D. falciformis were de novo sequenced for the aforementioned molecular markers. Results: The phylogenetic reconstruction divided all investigated Dactylogyrus species into four phylogenetic clades. The frst one encompassed species with the “varicorhini” type of haptoral ventral bar with a putative origin linked to the historical dispersion of cyprinids via the North African coastline. -
El Microbioma Epidérmico Como Nueva Herramienta Para Evaluar Los Efectos De La Contaminación Y Las Invasiones Biológicas Sobr
El microbioma epidérmico como nueva herramienta para evaluar los efectos de la contaminación y las invasiones biológicas sobre la salud de los peces de los ríos mediterráneos INFORME FINAL DICIEMBRE 2017 ALBERTO MACEDA-VEIGA ÍNDICE 1. Breve reseña del marco del proyecto y sus objetivos………………………………………1 2. Situación actual de los trabajos propuestos………………………………………………..1 3. Resultados y discusión presentados en forma de cinco publicaciones científicas……………………………………………………………………………………...2 PUBLICACIÓN 1……………………………………………………………………..2 PUBLICACIÓN 2……………………………………………………………………..6 PUBLICACIÓN 3……………………………………………………………………..8 PUBLICACIÓN 4……………………………………………………………………11 PUBLICACIÓN 5……………………………………………………………………13 4. Publicaciones en formato revista anexadas……………………………………………….15 1 1. Breve reseña del marco del proyecto y sus objetivos El objetivo general de este proyecto financiado por la Fundación Barcelona Zoo era determinar el impacto de las especies exóticas invasoras sobre la fauna nativa, principalmente peces, utilizando una aproximación fisiológica, parasitológica y microbiológica. Entendemos por microbiota al conjunto de microorganismos que viven sobre o dentro de un hospedador, en nuestro caso los peces. En sentido amplio, el presente proyecto abarca desde las bacterias comensales y patógenas hasta los protistas y los micrometazoos parásitos. No existe un estudio similar en la fauna nativa de las cuencas catalanas que haga un estudio de la microbiota tan exhaustivo a la par que determine variables fisiológicas. De hecho, son escasos este tipo de estudios en ecología de peces continentales a escala mundial. Los resultados de este proyecto tienen una gran importancia en conservación si tenemos en cuenta que el número de especies exóticas establecidas no hace más que aumentar a escala mundial, que los peces continentales son de los vertebrados más amenazados y que los ríos mediterráneos son uno de los más afectados por las invasiones biológicas.