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Cobitis Elongata, Heckel & Kner, 1858
Molekularna ekologija velikog vijuna (Cobitis elongata, Heckel & Kner, 1858) Nemec, Petra Master's thesis / Diplomski rad 2019 Degree Grantor / Ustanova koja je dodijelila akademski / stručni stupanj: University of Zagreb, Faculty of Science / Sveučilište u Zagrebu, Prirodoslovno-matematički fakultet Permanent link / Trajna poveznica: https://urn.nsk.hr/urn:nbn:hr:217:053268 Rights / Prava: In copyright Download date / Datum preuzimanja: 2021-10-02 Repository / Repozitorij: Repository of Faculty of Science - University of Zagreb Sveuĉilište u Zagrebu Prirodoslovno-matematiĉki fakultet Biološki odsjek Petra Nemec MOLEKULARNA EKOLOGIJA VELIKOG VIJUNA (Cobitis elongata Heckel & Kner, 1858) Diplomski rad Zagreb, 2019. Ovaj rad, izraĊen u Zoologijskom zavodu Biološkog odsjeka Prirodoslovno-matematiĉkog fakulteta Sveuĉilišta u Zagrebu, pod vodstvom doc. dr. sc. Ivane Buj, predan je na ocjenu Biološkom odsjeku Prirodoslovno-matematiĉkog fakulteta Sveuĉilišta u Zagrebu radi stjecanja zvanja magistra ekologije i zaštite prirode. Zahvala Zahvaljujem svojoj mentorici doc. dr. sc. Ivani Buj na stručnom vodstvu i prenesenom znanju, usmjeravanju i pomoći, strpljenju te vremenu koje mi je poklonila tijekom izrade ovog diplomskog rada. Hvala što ste vjerovali da ja to mogu! Hvala mojoj obitelji bez koje ovo sve ne bi bilo moguće. Hvala vam svima na velikoj potpori i brizi što ste me bodrili i bili uz mene tijekom mojih uspona, ali i padova. Najveća hvala mami i tati na bezuvjetnoj ljubavi, podršci, a najviše na svim odricanjima i nesebičnom trudu koji su uložili u moje obrazovanje. Zahvaljujem svim svojim prijateljima i kolegama s kojima sam provela najbolje studentske dane. Hvala vam na svakom zajedničkom trenutku, zabavnim druženjima, razgovorima te učenju do dugo u noć. Hvala što ste mi život u drugom gradu učinili ljepšim. -
Phylogenetic Relationships of Freshwater Fishes of the Genus Capoeta (Actinopterygii, Cyprinidae) in Iran
Received: 3 May 2016 | Revised: 8 August 2016 | Accepted: 9 August 2016 DOI: 10.1002/ece3.2411 ORIGINAL RESEARCH Phylogenetic relationships of freshwater fishes of the genus Capoeta (Actinopterygii, Cyprinidae) in Iran Hamid Reza Ghanavi | Elena G. Gonzalez | Ignacio Doadrio Museo Nacional de Ciencias Naturales, Biodiversity and Evolutionary Abstract Biology Department, CSIC, Madrid, Spain The Middle East contains a great diversity of Capoeta species, but their taxonomy re- Correspondence mains poorly described. We used mitochondrial history to examine diversity of the Hamid Reza Ghanavi, Department of algae- scraping cyprinid Capoeta in Iran, applying the species- delimiting approaches Biology, Lund University, Lund, Sweden. Email: [email protected] General Mixed Yule- Coalescent (GMYC) and Poisson Tree Process (PTP) as well as haplotype network analyses. Using the BEAST program, we also examined temporal divergence patterns of Capoeta. The monophyly of the genus and the existence of three previously described main clades (Mesopotamian, Anatolian- Iranian, and Aralo- Caspian) were confirmed. However, the phylogeny proposed novel taxonomic findings within Capoeta. Results of GMYC, bPTP, and phylogenetic analyses were similar and suggested that species diversity in Iran is currently underestimated. At least four can- didate species, Capoeta sp4, Capoeta sp5, Capoeta sp6, and Capoeta sp7, are awaiting description. Capoeta capoeta comprises a species complex with distinct genetic line- ages. The divergence times of the three main Capoeta clades are estimated to have occurred around 15.6–12.4 Mya, consistent with a Mio- Pleistocene origin of the di- versity of Capoeta in Iran. The changes in Caspian Sea levels associated with climate fluctuations and geomorphological events such as the uplift of the Zagros and Alborz Mountains may account for the complex speciation patterns in Capoeta in Iran. -
Informe Evaluaciones EICAT UICN
EVALUACIÓN DEL IMPACTO AMBIENTAL DE ESPECIES EXÓTICAS INVASORAS EEN LA CUENCA DEL GUADIANA A TRAVÉS DE LA METODOLOGÍA EICAT Abril 2019 Con el apoyo de: Título Evaluación del impacto ambiental de especies exóticas invasoras en la cuenca del Guadiana a través de la metodología EICAT Versión Abril de 2019 Idioma original Español Unidad responsable Programa de especies UICN‐Med Redactado por Laura Capdevila Argüelles (GEIB), Helena Clavero Sousa (UICN‐ Med) y Catherine Numa (UICN‐Med) Proyecto “Evaluación del impacto potencial de especies introducidas en España: análisis de viabilidad del sistema de clasificación EICAT” financiado con el apoyo del Ministerio para la Transición Ecológica, a través de la Fundación Biodiversidad, y de la Fundación MAVA 1 Índice AGRADECIMIENTOS ................................................................................................................................ 3 ACRÓNIMOS ............................................................................................................................................ 4 ANTECEDENTES ....................................................................................................................................... 5 METODOLOGÍA ....................................................................................................................................... 6 FICHAS‐RESUMEN DE LAS EVALUACIONES EICAT ................................................................................... 7 Azolla filiculoides ................................................................................................................................ -
Fishfriendly Innovative Technologies for Hydropower D1.1 Metadata
Ref. Ares(2017)5306028 - 30/10/2017 Fishfriendly Innovative Technologies for Hydropower Funded by the Horizon 2020 Framework Programme of the European Union D1.1 Metadata overview on fish response to disturbance Project Acronym FIThydro Project ID 727830 Work package 1 Deliverable Coordinator Christian Wolter Author(s) Ruben van Treeck (IGB), Jeroen Van Wich- elen (INBO), Johan Coeck (INBO), Lore Vandamme (INBO), Christian Wolter (IGB) Deliverable Lead beneficiary INBO, IGB Dissemination Level Public Delivery Date 31 October 2017 Actual Delivery Date 30 October 2017 Acknowledgement This project has received funding from the European Union’s Horizon 2020 research and inno- vation program under grant agreement No 727830. Executive Summary Aim Environmental assessment of hydropower facilities commonly includes means of fish assem- blage impact metrics, as e.g. injuries or mortality. However, this hardly allows for conclusion at the population or community level. To overcome this significant knowledge gap and to enable more efficient assessments, this task aimed in developing a fish species classification system according to their species-specific sensitivity against mortality. As one result, most sensitive fish species were identified as suitable candidates for in depth population effects and impact studies. Another objective was providing the biological and autecological baseline for developing a fish population hazard index for the European fish fauna. Methods The literature has been extensively reviewed and analysed for life history traits of fish providing resilience against and recovery from natural disturbances. The concept behind is that species used to cope with high natural mortality have evolved buffer mechanisms against, which might also foster recovery from human induced disturbances. -
Anaecypris Hispanica) NA BACIA DO GUADIANA (PORTUGAL)
CONSERVAÇÃO DO SARAMUGO (Anaecypris hispanica) NA BACIA DO GUADIANA (PORTUGAL) Relatório Final Ação A4 “Estudo sobre o impacte de alburmo (Alburnus alburnus) sobre as populações de Saramugo” Universidade de Évora, 2016 Ilhéu, MI, P. Matono, J. Silva, C. Sousa-Santos, D. Venade, M. Emídio, C. Jines, JM Bernardo, AM Costa, D. Sousa, P. Rodrigues, MJ Barão, AC. Cardoso, C. Carrapato, H. Lousa, N. Silva, P. Pinheiro, J. Almeida, R. Silva, R. Alcazar (2016). Ação A4 - Estudo sobre o impacte de alburmo (Alburnus alburnus) sobre as populações de Saramugo. Relatório de 2016 da Ação A4 do Projeto LIFE 13 NAT/PT/000786 - Saramugo. RESUMO Do conjunto das espécies piscícolas introduzidas mais recentemente em Portugal, o Alburno (Alburnus alburnus) destaca-se pelo grande incremento nas suas populações, ocorrendo atualmente em elevada densidade em muitos rios da Península Ibérica, com destaque para a basia Hidrográfica do rio Guadiana. Embora existam alguns estudos que permitam identificar o Alburno como uma forte ameaça às populações de Saramugo (Anaecypris hispanica), não existe conhecimento específico sobre muitos aspetos da bioecologia desta espécie invasiva em rios intermitentes, assim como o seu real impacto no contexto ambiental e biológico da área de intervenção do projeto. Assim, esta Acção pretendeu avaliar o potencial impacte do Alburno sobre o Saramugo, considerando três componentes: i) avaliação dos padrões de uso de espaço de Alburno e Saramugo e quantificação do grau de sobreposição do habitat; ii) avaliação das interações bióticas entre Alburno e Saramugo, designadamente predação e competição pelo espaço; iii) avaliação do potencial de hibridação entre as duas espécies. O uso de habitat de Saramugo e Alburno foi realizado com base em dados recolhidos numa vasta rede de locais na bacia hidrográfica do rio Guadiana. -
Identification of Priority Areas for the Conservation of Stream Fish Assemblages: Implications for River Management in France A
Identification of Priority Areas for the Conservation of Stream Fish Assemblages: Implications for River Management in France A. Maire, P. Laffaille, J.F. Maire, L. Buisson To cite this version: A. Maire, P. Laffaille, J.F. Maire, L. Buisson. Identification of Priority Areas for the Conservation of Stream Fish Assemblages: Implications for River Management in France. River Research and Applications, Wiley, 2016, 33 (4), pp.524-537. 10.1002/rra.3107. hal-01426354 HAL Id: hal-01426354 https://hal.archives-ouvertes.fr/hal-01426354 Submitted on 2 Jul 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License IDENTIFICATION OF PRIORITY AREAS FOR THE CONSERVATION OF STREAM FISH ASSEMBLAGES: IMPLICATIONS FOR RIVER MANAGEMENT IN FRANCE A. MAIREa*,†, P. LAFFAILLEb,c, J.-F. MAIREd AND L. BUISSONb,e a Irstea; UR HYAX, Pôle Onema-Irstea Hydroécologie des plans d’eau; Centre d’Aix-en-Provence, Aix-en-Provence, France b CNRS; UMR 5245 EcoLab, (Laboratoire Ecologie Fonctionnelle et Environnement), Toulouse, France c Université de Toulouse, INP, UPS; EcoLab; ENSAT, Castanet Tolosan, France d ONERA, The French Aerospace Lab Composites Department, Châtillon, France e Université de Toulouse, INP, UPS; EcoLab, Toulouse, France ABSTRACT Financial and human resources allocated to biodiversity conservation are often limited, making it impossible to protect all natural places, and priority areas for protection must be identified. -
Barbo Colirrojo – Barbus Haasi Mertens, 1925
Verdiell, D. (2017). Barbo colirrojo – Barbus haasi. En: Enciclopedia Virtual de los Vertebrados Españoles. Sanz, J. J., Elvira, B. (Eds.). Museo Nacional de Ciencias Naturales, Madrid. http://www.vertebradosibericos.org/ Barbo colirrojo – Barbus haasi Mertens, 1925 David Verdiell Departamento de Zoología y Antropología Física Universidad de Murcia Versión 26-10-2017 Versiones anteriores: 3-11-2006; 7-12-2007; 13-09-2011 (C) D. Verdiell ENCICLOPEDIA VIRTUAL DE LOS VERTEBRADOS ESPAÑOLES Sociedad de Amigos del MNCN – MNCN - CSIC Verdiell, D. (2017). Barbo colirrojo – Barbus haasi. En: Enciclopedia Virtual de los Vertebrados Españoles. Sanz, J. J., Elvira, B. (Eds.). Museo Nacional de Ciencias Naturales, Madrid. http://www.vertebradosibericos.org/ Sinónimos Barbus capito haasi, Karaman, 1971; Barbus plebejus haasi, Almaça, 1982; Messinobarbus haasi, (Bianco, 1998) (Doadrio y Perdices, 2003). Sistemática Descrito según ejemplares del río Noguera-Pallaresa (Pobla de Segur, Lérida) (Mertens, 1925; Almaça, 1982). Hay controversia sobre la fecha de publicación de la descripción de la especie. Aunque lleva la fecha de 2004, no se distribuyó hasta marzo de 1925. También publicado como separata con fecha de septiembre de 1925 (Eschmeyer, 1998, 2006). Recientes estudios genéticos y morfométricos incluyen a esta especie en el subgénero Barbus, grupo monofilético que incluye también a la especie Barbus meridionalis. Estas dos especies están filogenéticamente más próximas a las especies europeas que a las especies presentes en el norte de África, Grecia o el Cáucaso (Doadrio et al., 2002; Miranda y Escala, 2000, 2003). Identificación El último radio de la aleta dorsal suele tener pequeñas denticulaciones. Adultos con cinco dientes faríngeos en la fila externa y el cuarto no globoso. -
Karyotype and Chromosomal Characteristics of Rdna of Cobitis
COMPARATIVE A peer-reviewed open-access journal CompCytogen 12(4):Karyotype 483–491 and (2018) chromosomal characteristics of rDNA of Cobitis strumicae... 483 doi: 10.3897/CompCytogen.v12i4.28068 RESEARCH ARTICLE Cytogenetics http://compcytogen.pensoft.net International Journal of Plant & Animal Cytogenetics, Karyosystematics, and Molecular Systematics Karyotype and chromosomal characteristics of rDNA of Cobitis strumicae Karaman, 1955 (Teleostei, Cobitidae) from Lake Volvi, Greece Eva Hnátková1,4, Costas Triantaphyllidis2, Catherine Ozouf-Costaz3, Lukáš Choleva4, Zuzana Majtánová4, Joerg Bohlen4, Petr Ráb4 1 Department of Zoology and Fisheries, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences, 165 00 Prague, Kamýcká 129, Czech Republic 2 Department of Genetics, Development and Molecular Biology, Faculty of Sciences, School of Biology, Aristotle University of Thessaloniki, University Cam- pus, 54124 Thessaloniki, Greece 3 Institut de Biologie Paris Seine, UMR 7138 “Evolution”, Sorbonne Univer- sités, Case 5, 7 quai St Bernard, 75952 Paris cedex 05, Paris, France 4 Laboratory of Fish Genetics, Institute of Animal Physiology and Genetics, Academy of Sciences of Czech Republic, 277 21 Liběchov, Czech Republic Corresponding author: Eva Hnátková ([email protected]) Academic editor: Ekaterina Gornung | Received 29 June 2018 | Accepted 26 September 2018 | Published 16 November 2018 http://zoobank.org/314988CD-B02E-4B38-B88E-CE4E3C56A9EB Citation: Hnátková E, Triantaphyllidis C, Ozouf-Costaz C, Choleva L, -
Phylogenetic Position of the Fish Genus Ellopostoma (Teleostei: Cypriniformes) Using Molecular Genetic Data
157 Ichthyol. Explor. Freshwaters, Vol. 20, No. 2, pp. 157-162, 2 figs., June 2009 © 2009 by Verlag Dr. Friedrich Pfeil, München, Germany – ISSN 0936-9902 Phylogenetic position of the fish genus Ellopostoma (Teleostei: Cypriniformes) using molecular genetic data Jörg Bohlen* and Vendula Šlechtová* We investigated the phylogenetic position of Ellopostoma based on nuclear sequence data (RAG-1 gene). Ellopo- stoma is a member of the superfamily Cobitoidea (loaches) of Cypriniformes, but does not belong to any of the currently recognised families. It represents an independent lineage, recognised as a distinct new family Ellopo- stomatidae, characterized by a squarish and oblique snout, a minute protrusible mouth, a single pair of barbels, large eyes and 35-38 pharyngeal teeth. Introduction middle stretches of the Kapuas River in western Borneo. It is only in 1976 that the species was With about 3800 recognised species, the freshwa- collected again, also in the Kapuas (Roberts, 1989). ter fish order Cypriniformes (Osteichthyes: Tele- Kottelat (1989) recorded the presence of an un- ostei) is one of the largest recognised to date named Ellopostoma from the Malay Peninsula among vertebrates. It is divided into two main [Tapi River, Thailand], later described by Tan & lineages, the superfamilies Cyprinoidea (carps, Lim (2002) as E. mystax. Kottelat & Widjanarti minnows and related fishes) and Cobitoidea (2005) provide additional records of E. megalo- (loaches and related fishes) (Nelson, 2006). With- mycter, also in the Kapuas drainage. in Cobitoidea seven lineages are recognizable Because of its unique morphological features, (called families by e. g., Šlechtová et al., 2007; Chen the phylogenetic position of Ellopostoma has been & Mayden, 2009). -
Descripción De Nuevas Especies Animales De La Península Ibérica E Islas Baleares (1978-1994): Tendencias Taxonómicas Y Listado Sistemático
Graellsia, 53: 111-175 (1997) DESCRIPCIÓN DE NUEVAS ESPECIES ANIMALES DE LA PENÍNSULA IBÉRICA E ISLAS BALEARES (1978-1994): TENDENCIAS TAXONÓMICAS Y LISTADO SISTEMÁTICO M. Esteban (*) y B. Sanchiz (*) RESUMEN Durante el periodo 1978-1994 se han descrito cerca de 2.000 especies animales nue- vas para la ciencia en territorio ibérico-balear. Se presenta como apéndice un listado completo de las especies (1978-1993), ordenadas taxonómicamente, así como de sus referencias bibliográficas. Como tendencias generales en este proceso de inventario de la biodiversidad se aprecia un incremento moderado y sostenido en el número de taxones descritos, junto a una cada vez mayor contribución de los autores españoles. Es cada vez mayor el número de especies publicadas en revistas que aparecen en el Science Citation Index, así como el uso del idioma inglés. La mayoría de los phyla, clases u órdenes mues- tran gran variación en la cantidad de especies descritas cada año, dado el pequeño núme- ro absoluto de publicaciones. Los insectos son claramente el colectivo más estudiado, pero se aprecia una disminución en su importancia relativa, asociada al incremento de estudios en grupos poco conocidos como los nematodos. Palabras clave: Biodiversidad; Taxonomía; Península Ibérica; España; Portugal; Baleares. ABSTRACT Description of new animal species from the Iberian Peninsula and Balearic Islands (1978-1994): Taxonomic trends and systematic list During the period 1978-1994 about 2.000 new animal species have been described in the Iberian Peninsula and the Balearic Islands. A complete list of these new species for 1978-1993, taxonomically arranged, and their bibliographic references is given in an appendix. -
Iberian Cyprinids: Habitat Requirements and Vulnerabilities
Session 1 Cyprinid species: ecology and constraints Iberian cyprinids: habitat requirements and vulnerabilities 2nd Stakeholder Workshop – Iberia – Lisboa, Portugal 20.03.2019 Francisco Godinho Hidroerg 20/03/2018 Francisco Godinho 1 Setting the scene 22/03/2018 Francisco Godinho 2 Relatively small river catchmentsIberian fluvial systems Douro/Duero is the largest one, with 97 600 km2 Loire – 117 000 km2, Rhinne -185 000 km2, Vistula – 194 000 km2, Danube22/03/2018 – 817 000 km2, Volga –Francisco 1 380 Godinho 000 km2 3 Most Iberian rivers present a mediterranean hydrological regime (temporary rivers are common) Vascão river, a tributary of the Guadiana river 22/03/2018 Francisco Godinho 4 Cyprinidae are the characteristic fish taxa of Iberian fluvial ecosystems, occurring from mountain streams (up to 1000 m in altitude) to lowland rivers Natural lakes are rare in the Iberian Peninsula and most natural freshwater bodies are rivers and streams 22/03/2018 Francisco Godinho 5 Six fish-based river types have been distinguished in Portugal (INAG and AFN, 2012) Type 1 - Northern salmonid streams Type 2 - Northern salmonid–cyprinid trans. streams Type 3 - Northern-interior medium-sized cyprinid streams Type 4 - Northern-interior medium-sized cyprinid streams Type 5 - Southern medium-sized cyprinid streams Type 6 - Northern-coastal cyprinid streams With the exception of assemblages in small northern, high altitude streams, native cyprinids dominate most unaltered fish assemblages, showing a high sucess in the hidrological singular 22/03/2018 -
Identification and Modelling of a Representative Vulnerable Fish Species for Pesticide Risk Assessment in Europe
Identification and Modelling of a Representative Vulnerable Fish Species for Pesticide Risk Assessment in Europe Von der Fakultät für Mathematik, Informatik und Naturwissenschaften der RWTH Aachen University zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaften genehmigte Dissertation vorgelegt von Lara Ibrahim, M.Sc. aus Mazeraat Assaf, Libanon Berichter: Universitätsprofessor Dr. Andreas Schäffer Prof. Dr. Christoph Schäfers Tag der mündlichen Prüfung: 30. Juli 2015 Diese Dissertation ist auf den Internetseiten der Universitätsbibliothek online verfügbar Erklärung Ich versichere, dass ich diese Doktorarbeit selbständig und nur unter Verwendung der angegebenen Hilfsmittel angefertigt habe. Weiterhin versichere ich, die aus benutzten Quellen wörtlich oder inhaltlich entnommenen Stellen als solche kenntlich gemacht zu haben. Lara Ibrahim Aachen, am 18 März 2015 Zusammenfassung Die Zulassung von Pflanzenschutzmitteln in der Europäischen Gemeinschaft verlangt unter anderem eine Abschätzung des Risikos für Organismen in der Umwelt, die nicht Ziel der Anwendung sind. Unvertretbare Auswirkungen auf den Naturhalt sollen vermieden werden. Die ökologische Risikoanalyse stellt die dafür benötigten Informationen durch eine Abschätzung der Exposition der Organismen und der sich daraus ergebenden Effekte bereit. Die Effektabschätzung beruht dabei hauptsächlich auf standardisierten ökotoxikologischen Tests im Labor mit wenigen, oft nicht einheimischen Stellvertreterarten. In diesen Tests werden z. B. Effekte auf das Überleben, das Wachstum und/oder die Reproduktion von Fischen bei verschiedenen Konzentrationen der Testsubstanz gemessen und Endpunkte wie die LC50 (Lethal Concentrations for 50%) oder eine NOEC (No Observed Effect Concentration, z. B. für Wachstum oder Reproduktionsparameter) abgeleitet. Für Fische und Wirbeltiere im Allgemeinen beziehen sich die spezifischen Schutzziele auf das Überleben von Individuen und die Abundanz und Biomasse von Populationen.