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Medically Important Differences in Snake Venom Composition Are Dictated by Distinct Postgenomic Mechanisms
Medically important differences in snake venom composition are dictated by distinct postgenomic mechanisms Nicholas R. Casewella,b,1, Simon C. Wagstaffc, Wolfgang Wüsterb, Darren A. N. Cooka, Fiona M. S. Boltona, Sarah I. Kinga, Davinia Plad, Libia Sanzd, Juan J. Calveted, and Robert A. Harrisona aAlistair Reid Venom Research Unit and cBioinformatics Unit, Liverpool School of Tropical Medicine, Liverpool L3 5QA, United Kingdom; bMolecular Ecology and Evolution Group, School of Biological Sciences, Bangor University, Bangor LL57 2UW, United Kingdom; and dInstituto de Biomedicina de Valencia, Consejo Superior de Investigaciones Científicas, 11 46010 Valencia, Spain Edited by David B. Wake, University of California, Berkeley, CA, and approved May 14, 2014 (received for review March 27, 2014) Variation in venom composition is a ubiquitous phenomenon in few (approximately 5–10) multilocus gene families, with each snakes and occurs both interspecifically and intraspecifically. family capable of producing related isoforms generated by Venom variation can have severe outcomes for snakebite victims gene duplication events occurring over evolutionary time (1, 14, by rendering the specific antibodies found in antivenoms in- 15). The birth and death model of gene evolution (16) is fre- effective against heterologous toxins found in different venoms. quently invoked as the mechanism giving rise to venom gene The rapid evolutionary expansion of different toxin-encoding paralogs, with evidence that natural selection acting on surface gene families in different snake lineages is widely perceived as the exposed residues of the resulting gene duplicates facilitates main cause of venom variation. However, this view is simplistic subfunctionalization/neofunctionalization of the encoded proteins and disregards the understudied influence that processes acting (15, 17–19). -
(Apicomplexa: Adeleorina) from the Blood of Echis Pyramidum: Morphology and SSU Rdna Sequence Hepatozoon Pyramidumi Sp
Original Article ISSN 1984-2961 (Electronic) www.cbpv.org.br/rbpv Hepatozoon pyramidumi sp. n. (Apicomplexa: Adeleorina) from the blood of Echis pyramidum: morphology and SSU rDNA sequence Hepatozoon pyramidumi sp. n. (Apicomplexa: Adeleorina) do sangue de Echis pyramidum: morfologia e sequência de SSU rDNA Lamjed Mansour1,2; Heba Mohamed Abdel-Haleem3; Esam Sharf Al-Malki4; Saleh Al-Quraishy1; Abdel-Azeem Shaban Abdel-Baki3* 1 Zoology Department, College of Science, King Saud University, Riyadh, Saudi Arabia 2 Unité de Recherche de Biologie Intégrative et Écologie Évolutive et Fonctionnelle des Milieux Aquatiques, Département de Biologie, Faculté des Sciences de Tunis, Université de Tunis El Manar, Tunisia 3 Zoology Department, Faculty of Science, Beni-Suef University, Beni-Suef, Egypt 4 Department of Biology, College of Sciences, Majmaah University, Majmaah 11952, Riyadh Region, Saudi Arabia How to cite: Mansour L, Abdel-Haleem HM, Al-Malki ES, Al-Quraishy S, Abdel-Baki AZS. Hepatozoon pyramidumi sp. n. (Apicomplexa: Adeleorina) from the blood of Echis pyramidum: morphology and SSU rDNA sequence. Braz J Vet Parasitol 2020; 29(2): e002420. https://doi.org/10.1590/S1984-29612020019 Abstract Hepatozoon pyramidumi sp. n. is described from the blood of the Egyptian saw-scaled viper, Echis pyramidum, captured from Saudi Arabia. Five out of ten viper specimens examined (50%) were found infected with Hepatozoon pyramidumi sp. n. with parasitaemia level ranged from 20-30%. The infection was restricted only to the erythrocytes. Two morphologically different forms of intraerythrocytic stages were observed; small and mature gamonts. The small ganomt with average size of 10.7 × 3.5 μm. Mature gamont was sausage-shaped with recurved poles measuring 16.3 × 4.2 μm in average size. -
Vascular Plants Diversity and Ethnobotany With
VASCULAR PLANTS DIVERSITY AND ETHNOBOTANY WITH EMPHASIS TO TRADITIONAL MEDICINAL AND WILD EDIBLE PLANTS IN DUGDA DAWA DISTRICT OF BORANA ZONE, OROMIA REGIONAL STATE, ETHIOPIA Mersha Ashagre Eshete Addis Ababa University Addis Ababa, Ethiopia April 2017 VASCULAR PLANTS DIVERSITY AND ETHNOBOTANY WITH EMPHASIS TO TRADITIONAL MEDICINAL AND WILD EDIBLE PLANTS IN DUGDA DAWA DISTRICT OF BORANA ZONE, OROMIA REGIONAL STATE, ETHIOPIA Mersha Ashagre Eshete A Thesis Submitted to The Department of Plant Biology and Biodiversity Management Presented in Fulfillment of the Requirements for the Degree of Doctor of Philosophy (Plant Biology and Biodiversity Management) Addis Ababa University Addis Ababa, Ethiopia April 2017 i ADDIS ABABA UNIVERSITY GRADUATE PROGRAMMES This is to certify that the thesis prepared by Mersha Ashagre Eshete, entitled: “Vascular Plants Diversity and Ethnobotany with Emphasis to Traditional Medicinal and Wild Edible Plants in Dugda Dawa District of Borana Zone, Oromia Regional State, Ethiopia”, and submitted in fulfillment of the requirements for the Degree of Doctor of Philosophy (Plant Biology and Biodiversity Management) complies with the regulations of the University and meets the accepted standards with respect to originality and quality. Signed by Research Supervisors: Name Signature Date 1. _____________________ _________________ _____________ 2.______________________ _________________ _____________ 3._____________________ _________________ ______________ 4.____________________ __________________ _______________ _____________________ -
Self-Envenomation in an Egyptian Saw-Scaled Viper Using Region of Interest
The biter bit? Investigation of possible in-ovo self- envenomation in an Egyptian saw-scaled viper using region of interest X-ray microtomography John Mulley, Richard E Johnston Proven examples of self-envenomation by venomous snakes, and especially instances of death as a result of these events, are extremely rare, if not non-existent. Here we use Region of Interest X-ray microtomography to investigate a putative case of fatal in-ovo s t self-envenomation in the Egyptian saw-scaled viper, Echis pyramidum. Our analyses have n i provided unprecedented insight into the skeletal anatomy of a late-stage embryonic snake r P and the disposition of the fangs without disrupting or destroying a unique biological e r specimen. P PeerJ PrePrints | http://dx.doi.org/10.7287/peerj.preprints.624v1 | CC-BY 4.0 Open Access | rec: 19 Nov 2014, publ: 19 Nov 2014 1 Title page 2 3 The biter bit? Investigation of possible in-ovo self-envenomation in an Egyptian saw-scaled 4 viper using region of interest X-ray microtomography 5 6 Richard E Johnston1 and John F Mulley2* 7 8 1. College of Engineering, Swansea University, Swansea, SA2 8PP, United Kingdom s 9 2. School of Biological Sciences, Bangor University, Bangor, Gwynedd LL57 2UW, United t n i 10 Kingdom r P 11 e r P 12 *To whom correspondence should be addressed ([email protected]) 13 14 15 16 17 18 19 20 21 22 23 24 25 1 PeerJ PrePrints | http://dx.doi.org/10.7287/peerj.preprints.624v1 | CC-BY 4.0 Open Access | rec: 19 Nov 2014, publ: 19 Nov 2014 26 Abstract 27 Proven examples of self-envenomation by venomous snakes, and especially instances of 28 death as a result of these events, are extremely rare, if not non-existent. -
Camel Forage Variety in the Karamoja Sub-Region, Uganda
Salamula et al. Pastoralism: Research, Policy and Practice (2017) 7:8 Pastoralism: Research, Policy DOI 10.1186/s13570-017-0080-6 and Practice RESEARCH Open Access Camel forage variety in the Karamoja sub- region, Uganda Jenipher Biira Salamula1*, Anthony Egeru1,2, Daniel Knox Aleper3 and Justine Jumba Namaalwa1 Abstract Camels have the potential to increase the resilience of pastoral communities to the impacts of climate variability and change. Despite this potential, there is limited documentation of the camel forage species, their availability and distribution. The study was conducted in Karamoja sub-region in Uganda and involved assessment of vegetation with intent to characterize the range of forage species available for camels in the region. The camel grazing area was stratified based on land cover types, namely woodland, bushland, grassland and farmland using the Amudat and Moroto district vegetation maps. Vegetation plots measuring 20 m × 20 m were mapped out among the land cover types where species identification was undertaken. In addition, a cross-sectional survey involving 52 camel herders was used to document the camel forage species preferences. Shannon and Simpson diversity indices as well as the Jaccard coefficient were used to measure the species richness, relative abundance, diversity and plant community similarities among the land cover types. Results showed high species richness and diversities in the bushland and woodland land cover types. Plant communities in the woodland and bushlands were found to be more similar. A wide range of plant species were reported to be preferred by camels in the study area, that is 63 in Amudat and 50 in Moroto districts. -
ETHIOPIA: Birding the Roof of Africa; with Southern Extension a Tropical Birding Set Departure
ETHIOPIA: Birding the Roof of Africa; with Southern Extension A Tropical Birding Set Departure February 7 – March 1, 2010 Guide: Ken Behrens All photos taken by Ken Behrens during this trip ORIENTATION I have chosen to use a different format for this trip report. First, comes a general introduction to Ethiopia. The text of this section is largely drawn from the recently published Birding Ethiopia, authored by Keith Barnes, Christian, Boix and I. For more information on the book, check out http://www.lynxeds.com/product/birding-ethiopia. After the country introduction comes a summary of the highlights of this tour. Next comes a day-by-day itinerary. Finally, there is an annotated bird list and a mammal list. ETHIOPIA INTRODUCTION Many people imagine Ethiopia as a flat, famine- ridden desert, but this is far from the case. Ethiopia is remarkably diverse, and unexpectedly lush. This is the ʻroof of Africaʼ, holding the continentʼs largest and most contiguous mountain ranges, and some of its tallest peaks. Cleaving the mountains is the Great Rift Valley, which is dotted with beautiful lakes. Towards the borders of the country lie stretches of dry scrub that are more like the desert most people imagine. But even in this arid savanna, diversity is high, and the desert explodes into verdure during the rainy season. The diversity of Ethiopiaʼs landscapes supports a parallel diversity of birds and other wildlife, and although birds are the focus of our tour, there is much more to the country. Ethiopia is the only country in Africa that was never systematically colonized, and Rueppell’s Robin-Chat, a bird of the Ethiopian mountains. -
Sudan Snakes
NOTES ON SUDAN SNAKES A GUIDE TO THE SPECIES REPRESENTED IN THE COLLECTION IN THE NATURAL HISTORY MUSEUM KHARTOUM BY N. L. CORKILL, M.D. Sudan Medical Service. SUDAN GOVERNMENT MUSEUM (NATURAL HISTORY) PUBLICATION No. 3 AUGUST, 1935 PRICE - - - P:T. 10(2/-). NOTES ON SUDAN SNAKES A GUIDE TO THE SPECIES REPRESENTED IN THE COLLECTION IN THE NATURAL HISTORY MUSEUM KHARTOUM BY N. L. GORKILL, M.D. Sudan Medical Service. SUDAN GOVERNMENT MUSEUM (NATURAL HISTORY) PUBLICATION No. 3 AUGUST, 1935 PRICE - - - P.T. 10(2/-). PRINTED BY M*CORQUODALE & CO. J CONTENTS. PAGE Foreword ... ... ... ... ... ... ••• ••• 4 Preface ... 5 Introduction... ... ... ... ... ... ... ... 6 Systematic Index ... ... ... ... ... ... ... 9 Family Typhlopidge, the Blind Snakes 11 Family Leptotyphlopidse, the Earth Snakes ... ... ... n Family Boidae, the Boas and Pythons ... ... ... ... 12 Family Colubridae, the Colubrids 14 (a) Series Aglypha, the Fangless Colubrids ... ... 14 (b) Series Opisthoglypha, the Back-fanged Colubrids ... 19 Family Elapidae, the Cobras 23 Family Viperidas, the Vipers ... ... ... ... ... 26 Key to the Identification of Sudanese Thanat ophidians ... 31 Snake Bite in the Sudan 33 First Aid and Treatment of Snake Bite 34 Index to Snake Names :—• (a) Scientific ... ... ... ... ... ... ... 36 (b) Popular English 37 (c) Vernacular Sudanese 38 Appendix I. List of additional Sudanese Species ... ... 39 Appendix II. Instructions for Collectors 40 3 FOREWORD. HE Sudan Government collection of snakes was first started in 1920, and by 1930 contained 220 specimens. In the latter year T Mr. N. L. Corkill of the Sudan Medical Service, who had recently completed a survey of snakes and snake bite in Iraq, undertook to classify all specimens in the collection and subsequent additions thereto. -
High Throughput Screening and Identification of Coagulopathic Snake Venom Proteins and 2 Peptides Using Nanofractionation and Proteomics Approaches
bioRxiv preprint doi: https://doi.org/10.1101/780155; this version posted September 23, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Classified Personnel Information 1 High throughput screening and identification of coagulopathic snake venom proteins and 2 peptides using nanofractionation and proteomics approaches 3 4 Julien Slagbooma,b, Marija Mladićc, Chunfang Xie b, Freek Vonkd, Govert W. Somsenb, Nicholas 5 R. Casewella, Jeroen Koolb 6 aCentre for Snakebite Research & Interventions, Liverpool School of Tropical Medicine, 7 Liverpool, UK 8 bDivision of BioAnalytical Chemistry, Amsterdam Institute for Molecules Medicines and Systems, 9 VU University Amsterdam, Amsterdam, The Netherlands 10 cAnimal Sciences and Health, Institute of Biology Leiden, Leiden University, Leiden, The 11 Netherlands 12 dNaturalis Biodiversity Center, Leiden, The Netherlands 13 *Corresponding author [email protected] 14 15 1 bioRxiv preprint doi: https://doi.org/10.1101/780155; this version posted September 23, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Classified Personnel Information 16 Abstract 17 Snakebite is a neglected tropical disease that results in a variety of systemic and local pathologies in 18 envenomed victims and is responsible for around 138,000 deaths every year. Many snake venoms cause 19 severe coagulopathy that makes victims vulnerable to suffering life-threating haemorrhage. -
Biogeography of the Reptiles of the Central African Republic
African Journal of Herpetology, 2006 55(1): 23-59. ©Herpetological Association of Africa Original article Biogeography of the Reptiles of the Central African Republic LAURENT CHIRIO AND IVAN INEICH Muséum National d’Histoire Naturelle Département de Systématique et Evolution (Reptiles) – USM 602, Case Postale 30, 25, rue Cuvier, F-75005 Paris, France This work is dedicated to the memory of our friend and colleague Jens B. Rasmussen, Curator of Reptiles at the Zoological Museum of Copenhagen, Denmark Abstract.—A large number of reptiles from the Central African Republic (CAR) were collected during recent surveys conducted over six years (October 1990 to June 1996) and deposited at the Paris Natural History Museum (MNHN). This large collection of 4873 specimens comprises 86 terrapins and tortois- es, five crocodiles, 1814 lizards, 38 amphisbaenids and 2930 snakes, totalling 183 species from 78 local- ities within the CAR. A total of 62 taxa were recorded for the first time in the CAR, the occurrence of numerous others was confirmed, and the known distribution of several taxa is greatly extended. Based on this material and an additional six species known to occur in, or immediately adjacent to, the coun- try from other sources, we present a biogeographical analysis of the 189 species of reptiles in the CAR. Key words.—Central African Republic, reptile fauna, biogeography, distribution. he majority of African countries have been improved; known distributions of many species Tthe subject of several reptile studies (see are greatly expanded and distributions of some for example LeBreton 1999 for Cameroon). species are questioned in light of our results. -
Ethiopian Endemics I 11Th to 29Th January 2014 & Lalibela Historical Extension 29Th January to 1St February 2014
Ethiopian Endemics I 11th to 29th January 2014 & Lalibela Historical Extension th st 29 January to 1 February 2014 Trip report Abyssinian Roller by Markus Lilje Tour leaders: Wayne Jones & Andrew Stainthorpe. Trip report compiled by Wayne Jones RBT Ethiopian Endemics I Trip Report 2014 2 Top 10 birds as voted by participants: 1. Ruspoli’s Turaco 2. Abyssinian Roller 3. Half-collared Kingfisher 4. Fox Kestrel 5. Abyssinian Ground Thrush 6. Nile Valley Sunbird 7. Hartlaub’s Bustard 8. Quailfinch 9. Abyssinian Catbird 10. Abyssinian Woodpecker Tour Summary Our tour kicked off in the grounds of our hotel in Addis Ababa on what was, essentially, an arrival day. Despite its location in the middle of the bustling and chaotic capital city, the gardens yielded a good selection of birds including Wattled Ibis, African Harrier-Hawk, White-collared Pigeon, African Paradise Flycatcher, Brown Parisoma, Dusky Turtle Dove, Abyssinian Thrush, Montane White-eye, Abyssinian Slaty Flycatcher, Brown-rumped Seedeater and Ruppell’s Robin-Chat. Common Cranes by Adam Riley We set out early the following morning so as to arrive at Lake Chelekcheka just after dawn, when the hundreds of Common Cranes that roost there start becoming active amid a cacophony of guttural bugling. With waves of cranes passing over us on their way to forage in the fields, we found plenty of other waterbirds including Northern Shoveler, Spur-winged Goose, Northern Pintail, Eurasian Teal, Greater and Lesser Flamingos, Spur-winged Lapwing, Three-banded Plover, Black-tailed Godwit and Temminck’s Stint. Yellow Wagtails abounded and one of the area’s specials, the tiny and gorgeous Quailfinch, gave excellent views. -
Djibouti & Somaliland Rep 10
DJIBOUTI & SOMALILAND 4 – 25 SEPTEMBER 2010 TOUR REPORT LEADER: NIK BORROW assisted by ABDI JAMA Warlords, pirates, chaos and lawlessness are all associated with Somalia. What isn’t always appreciated is that what was once British Somaliland has, since 1991, been the Republic of Somaliland, and this peaceful enclave doesn’t take kindly to being associated with the eastern half of the country’s descent into anarchy. The tiny country of Djibouti is also quite stable forming as it does an important port to the Horn of Africa at the narrowest part of the Red Sea and at the mouth of the Rift Valley. Our adventurous group set off on this pioneering tour to these countries in order to look for some of the endemics and specialties of the region that had until recently been considered unattainable. Little ornithological work has been carried out in the country since the late 1980’s but there had already been a small number of intrepid birders set foot within the country’s borders this year. However, our tour was aiming to be the most thorough and exhaustive yet and we succeeded remarkably well in finding some long lost species and making some significant ornithological discoveries. We amassed a total of 324 species of birds of which all but two were seen and 23 species of mammals. The mouth-watering endemics and near-endemics that were tracked down and all seen well were Archer’s Buzzard, Djibouti Francolin, Little Brown Bustard, Somali Pigeon, Somali Lark, Lesser Hoopoe-lark, Somali Wheatear, Somali Thrush, Somali Starling, Somali Golden-winged Grosbeak and Warsangli Linnet. -
Venomous Snakes of the Horn of Africa
VENOMOUS SNAKES OF THE HORN OF AFRICA Venomous Snake Identification Burrowing Asps Boomslang, Vine and Tree Snakes Snakebite Prevention Behavior: Venomous snakes are found throughout the Horn of Africa. Assume that any snake you encounter is venomous. Leave Long, Flattened Head, Round Fixed Front Smooth Long, Cylindrical Behavior: Burrowing asps spend the majority of time underground in burrows under stones, concrete slabs, logs, snakes alone. Many people are bitten because they try to kill a snake or get a closer look at it. Slightly Distinct from Neck Pupils Fangs Scales Body, Thin Tail They are active during both the daytime and nighttime. or wooden planks. 5-8 feet in length They live in trees and feed on bats, birds, and lizards. They are active on the surface only during the nighttime hours or after heavy rains flood their burrows. They are not aggressive: will quickly flee to nearest tree or bush if surprised on ground. Snakebites occur most often: MAMBAS They feed on small reptiles and rodents found in holes or underground. They do not climb. When molested, they inflate their bodies or necks as threat posture before biting. After rainstorms that follow long, dry spells or after rains in desert areas. Dendroaspis spp. SAVANNA VINE They are not aggressive: bites usually occur at night when snakes are stepped on accidentally. SNAKE During the half-hour before total darkness and the first two hours after dark. Habitats: Trees next to caves, coastal bush and reeds, tropical forests, open savannas, Thelotornis Habitats: Burrows in sand or soft soil, semi-desert areas, woodlands, and savannas.