Shifting Baselines in the Galapagos White Fin Fishery, Using Fisher's
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Fish Spawning Aggregations
Fish Spawning Aggregations a focal point of fisheries management and marine conservation in Mexico Photo: Octavio Aburto Authorship Brad Erisman – Coastal Fisheries Research Program, University of Texas Marine Science Institute, 750 Channel View Drive, Port Aransas, TX 78373 William Heyman – LGL Ecological Research Associates, Inc., 4103 S. Texas Avenue, Bryan TX 77802 Stuart Fulton – Comunidad y Biodiversidad, Isla del Peruano 215, Lomas de Miramar, Guaymas, Sonora, Mexico Timothy Rowell – Gulf of California Marine Program, Scripps Institution of Oceanography, 9500 Gilman Drive, La Jolla, CA 92037 Illustrations – Larry Allen and Madeline Wukusick Graphic Design – Madeline Wukusick | www.communique.design Photography – Octavio Aburto, Richard Barnden, Douglas David Seifert, Walt Stearns, Cristina Limonta, Alfredo Barroso Citation – Erisman, B., W.D. Heyman, S. Fulton, and T.Rowell 2018. Fish spawning aggregations: a focal point of fisheries management and marine conservation in Mexico. Gulf of California Marine Program, La Jolla, CA. 24 p. Email Contact: Brad Erisman, [email protected] Fish Spawning Aggregations // 2 Contents > Introduction .................................................................................................................................................................. 4 > What are fish spawning aggregations (FSAs)? ............................................................................................................ 5 > What kinds of fishes form FSAs? ................................................................................................................................ -
RNA Detection Technology for Applications in Marine Science: Microbes to Fish Robert Michael Ulrich University of South Florida, [email protected]
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School 6-25-2014 RNA Detection Technology for Applications in Marine Science: Microbes to Fish Robert Michael Ulrich University of South Florida, [email protected] Follow this and additional works at: https://scholarcommons.usf.edu/etd Part of the Biology Commons, and the Molecular Biology Commons Scholar Commons Citation Ulrich, Robert Michael, "RNA Detection Technology for Applications in Marine Science: Microbes to Fish" (2014). Graduate Theses and Dissertations. https://scholarcommons.usf.edu/etd/5321 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. RNA Detection Technology for Applications in Marine Science: Microbes to Fish by Robert M. Ulrich A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy College of Marine Science University of South Florida Major Professor: John H. Paul, Ph.D. Valerie J. Harwood, Ph.D. Mya Breitbart, Ph.D. Christopher D. Stallings, Ph.D. David E. John, Ph.D. Date of Approval June 25, 2014 Keywords: NASBA, grouper, Karenia mikimotoi, Enterococcus Copyright © 2014, Robert M. Ulrich DEDICATION This dissertation is dedicated to my fiancée, Dr. Shannon McQuaig for inspiring my return to graduate school and her continued support over the last four years. On no other porch in our little town have there been more impactful scientific discussions, nor more words of encouragement. ACKNOWLEDGMENTS I gratefully acknowledge the many people who have encouraged and advised me throughout my graduate studies. -
Valuable but Vulnerable: Over-Fishing and Under-Management Continue to Threaten Groupers So What Now?
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/339934856 Valuable but vulnerable: Over-fishing and under-management continue to threaten groupers so what now? Article in Marine Policy · June 2020 DOI: 10.1016/j.marpol.2020.103909 CITATIONS READS 15 845 17 authors, including: João Pedro Barreiros Alfonso Aguilar-Perera University of the Azores - Faculty of Agrarian and Environmental Sciences Universidad Autónoma de Yucatán -México 215 PUBLICATIONS 2,177 CITATIONS 94 PUBLICATIONS 1,085 CITATIONS SEE PROFILE SEE PROFILE Pedro Afonso Brad E. Erisman IMAR Institute of Marine Research / OKEANOS NOAA / NMFS Southwest Fisheries Science Center 152 PUBLICATIONS 2,700 CITATIONS 170 PUBLICATIONS 2,569 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Comparative assessments of vocalizations in Indo-Pacific groupers View project Study on the reef fishes of the south India View project All content following this page was uploaded by Matthew Thomas Craig on 25 March 2020. The user has requested enhancement of the downloaded file. Marine Policy 116 (2020) 103909 Contents lists available at ScienceDirect Marine Policy journal homepage: http://www.elsevier.com/locate/marpol Full length article Valuable but vulnerable: Over-fishing and under-management continue to threaten groupers so what now? Yvonne J. Sadovy de Mitcheson a,b, Christi Linardich c, Joao~ Pedro Barreiros d, Gina M. Ralph c, Alfonso Aguilar-Perera e, Pedro Afonso f,g,h, Brad E. Erisman i, David A. Pollard j, Sean T. Fennessy k, Athila A. Bertoncini l,m, Rekha J. -
Taverampe2018.Pdf
Molecular Phylogenetics and Evolution 121 (2018) 212–223 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Multilocus phylogeny, divergence times, and a major role for the benthic-to- T pelagic axis in the diversification of grunts (Haemulidae) ⁎ Jose Taveraa,b, , Arturo Acero P.c, Peter C. Wainwrightb a Departamento de Biología, Universidad del Valle, Cali, Colombia b Department of Evolution and Ecology, University of California, Davis, CA 95616, United States c Instituto de Estudios en Ciencias del Mar, CECIMAR, Universidad Nacional de Colombia sede Caribe, El Rodadero, Santa Marta, Colombia ARTICLE INFO ABSTRACT Keywords: We present a phylogenetic analysis with divergence time estimates, and an ecomorphological assessment of the Percomorpharia role of the benthic-to-pelagic axis of diversification in the history of haemulid fishes. Phylogenetic analyses were Fish performed on 97 grunt species based on sequence data collected from seven loci. Divergence time estimation Functional traits indicates that Haemulidae originated during the mid Eocene (54.7–42.3 Ma) but that the major lineages were Morphospace formed during the mid-Oligocene 30–25 Ma. We propose a new classification that reflects the phylogenetic Macroevolution history of grunts. Overall the pattern of morphological and functional diversification in grunts appears to be Zooplanktivore strongly linked with feeding ecology. Feeding traits and the first principal component of body shape strongly separate species that feed in benthic and pelagic habitats. The benthic-to-pelagic axis has been the major axis of ecomorphological diversification in this important group of tropical shoreline fishes, with about 13 transitions between feeding habitats that have had major consequences for head and body morphology. -
How to Cite Complete Issue More Information About This Article
Revista de Biología Tropical ISSN: 0034-7744 ISSN: 2215-2075 Universidad de Costa Rica Llerena-Martillo, Yasmania; Peñaherrera-Palma, César; Espinoza, Eduardo R. Fish assemblages in three fringed mangrove bays of Santa Cruz Island, Galapagos Marine Reserve Revista de Biología Tropical, vol. 66, no. 2, 2018, pp. 674-687 Universidad de Costa Rica DOI: 10.15517/rbt.v66i2.33400 Available in: http://www.redalyc.org/articulo.oa?id=44958219014 How to cite Complete issue Scientific Information System Redalyc More information about this article Network of Scientific Journals from Latin America and the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Project academic non-profit, developed under the open access initiative Fish assemblages in three fringed mangrove bays of Santa Cruz Island, Galapagos Marine Reserve Yasmania Llerena-Martillo1, César Peñaherrera-Palma2, 3, 4 & Eduardo R. Espinoza4 1. San Francisco of Quito University – Galapagos Institute for the Arts and Sciences (GAIAS), Charles Darwin St., San Cristobal Island, Ecuador; [email protected] 2. Pontifical Catholic University of Ecuador – Manabí, Eudoro Loor St. Portoviejo, Manabí, Ecuador. 3. Institute for Marine and Antarctic Studies, University of Tasmania, Private Bag 49, Hobart, TAS, Australia; [email protected] 4. Marines Ecosystems Monitoring, Galapagos National Park Directorate, Charles Darwin St., Santa Cruz Island, Ecuador; [email protected] Received 22-VIII-2017. Corrected 19-I-2018. Accepted 12-II-2018. Abstract: Mangrove-fringed bays are highly variable ecosystems that provide critical habitats for fish species. In this study we assessed the fish assemblage in three mangrove-fringed bays (Punta Rocafuerte, Saca Calzón and Garrapatero) in the Southeast side of Santa Cruz Island, Galapagos Marine Reserve. -
Using Fishers' Anecdotes, Naturalists' Observations and Grey
F I S H and F I S H E R I E S , 2005, 6, 121–133 Using fishers’ anecdotes, naturalists’ observations and grey literature to reassess marine species at risk: the case of the Gulf grouper in the Gulf of California, Mexico Andrea Sa´enz–Arroyo1,2, Callum M. Roberts2, Jorge Torre1 & Micheline Carin˜o-Olvera3 1Comunidad y Biodiversidad A.C., Bahı´a de Bacochibampo, S/N Colonia Lomas de Corte´s, Guaymas, 85450 Sonora, Me´xico; 2Environment Department, University of York, York YO10 5DD, UK; 3Universidad Auto´noma de Baja California Sur, A´ rea Interdisciplinaria de Ciencias Sociales, Apartado Postal 19 -B, La Paz, 23080 Baja California Sur, Me´xico Abstract Correspondence: Designing fishing policies without knowledge of past levels of target species Andrea Sa´enz– Arroyo, Comunidad y abundance is a dangerous omission for fisheries management. However, as fisheries Biodiversidad A.C., monitoring started long after exploitation of many species began, this is a difficult Bahı´a de Bacochib- issue to address. Here we show how the ‘shifting baseline’ syndrome can affect the ampo, S/N Colonia stock assessment of a vulnerable species by masking real population trends and Lomas de Corte´s, thereby put marine animals at serious risk. Current fishery data suggest that landings Guaymas, 85450 Sonora, Me´xico of the large Gulf grouper (Mycteroperca jordani, Serranidae) are increasing in the Gulf Tel.: +52622-2212670 of California. However, reviews of historical evidence, naturalists’ observations and a Fax: +52622-2212671 systematic documentation of fishers’ perceptions of trends in the abundance of this E-mail: asaenz@ species indicate that it has dramatically declined. -
Ensuring Seafood Identity: Grouper Identification by Real-Time Nucleic
Food Control 31 (2013) 337e344 Contents lists available at SciVerse ScienceDirect Food Control journal homepage: www.elsevier.com/locate/foodcont Ensuring seafood identity: Grouper identification by real-time nucleic acid sequence-based amplification (RT-NASBA) Robert M. Ulrich a, David E. John b, Geran W. Barton c, Gary S. Hendrick c, David P. Fries c, John H. Paul a,* a College of Marine Science, MSL 119, University of South Florida, 140 Seventh Ave. South, St. Petersburg, FL 33701, USA b Department of Biological Sciences, University of South Florida St. Petersburg, 140 Seventh Ave. S., St. Petersburg, FL 33701, USA c EcoSystems Technology Group, College of Marine Science, University of South Florida, 140 Seventh Ave. S., St. Petersburg, FL 33701, USA article info abstract Article history: Grouper are one of the most economically important seafood products in the state of Florida and their Received 19 September 2012 popularity as a high-end restaurant dish is increasing across the U.S. There is an increased incidence rate Accepted 3 November 2012 of the purposeful, fraudulent mislabeling of less costly and more readily available fish species as grouper in the U.S., particularly in Florida. This is compounded by commercial quotas on grouper becoming Keywords: increasingly more restrictive, which continues to drive both wholesale and restaurant prices higher each RT-NASBA year. Currently, the U.S. Food and Drug Administration recognize 56 species of fish that can use “grouper” FDA seafood list as an acceptable market name for interstate commerce. This group of fish includes species from ten Grouper fi fi Mislabeling different genera, making accurate taxonomic identi cation dif cult especially if distinguishing features such as skin, head, and tail have been removed. -
Perciformes: Haemulidae) Inferred Using Mitochondrial and Nuclear Genes
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/256288239 A molecular phylogeny of the Grunts (Perciformes: Haemulidae) inferred using mitochondrial and nuclear genes Article in Zootaxa · June 2011 DOI: 10.11646/zootaxa.2966.1.4 CITATIONS READS 35 633 3 authors, including: Millicent D Sanciangco Luiz A Rocha Old Dominion University California Academy of Sciences 26 PUBLICATIONS 1,370 CITATIONS 312 PUBLICATIONS 8,691 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Mesophotic Coral Reefs View project Vitória-Trindade Chain View project All content following this page was uploaded by Luiz A Rocha on 20 May 2014. The user has requested enhancement of the downloaded file. Zootaxa 2966: 37–50 (2011) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2011 · Magnolia Press ISSN 1175-5334 (online edition) A molecular phylogeny of the Grunts (Perciformes: Haemulidae) inferred using mitochondrial and nuclear genes MILLICENT D. SANCIANGCO1, LUIZ A. ROCHA2 & KENT E. CARPENTER1 1Department of Biological Sciences, Old Dominion University, Mills Godwin Building, Norfolk, VA 23529 USA. E-mail: [email protected], [email protected] 2Marine Science Institute, University of Texas at Austin, 750 Channel View Dr., Port Aransas, TX 78373, USA. E-mail: [email protected] Abstract We infer a phylogeny of haemulid genera using mitochondrial COI and Cyt b genes and nuclear RAG1, SH3PX3, and Plagl2 genes from 56 haemulid species representing 18 genera of the expanded haemulids (including the former inermiids) and ten outgroup species. Results from maximum parsimony, maximum likelihood, and Bayesian analyses show strong support for a monophyletic Haemulidae with the inclusion of Emmelichthyops atlanticus. -
Red Snapper, Vermilion Snapper, Yellowtail Snapper Gulf of Mexico
Red Snapper, Vermilion Snapper, Yellowtail Snapper Lutjanus campechanus, Rhomboplites aurorubens, Ocyurus chrysurus ©Monterey Bay Aquarium Gulf of Mexico/South Atlantic Vertical Line: Hydraulic/Electric Reel, Rod and Reel, Hand Line January 9, 2013 Rachelle Fisher, Consulting Researcher Disclaimer Seafood Watch® strives to ensure all our Seafood Reports and the recommendations contained therein are accurate and reflect the most up-to-date evidence available at time of publication. All our reports are peer- reviewed for accuracy and completeness by external scientists with expertise in ecology, fisheries science or aquaculture. Scientific review, however, does not constitute an endorsement of the Seafood Watch program or its recommendations on the part of the reviewing scientists. Seafood Watch is solely responsible for the conclusions reached in this report. We always welcome additional or updated data that can be used for the next revision. Seafood Watch and Seafood Reports are made possible through a grant from the David and Lucile Packard Foundation. 2 Final Seafood Recommendation Although there are many snappers caught in the U.S., only the three most commercially important species relative to landed weight and value (red snapper (Lutjanus campechanus), vermilion snapper (Rhomboplites aurorubens), and yellowtail snapper (Ocyurus chrysurus) are discussed here. This report discusses snapper caught in the South Atlantic (SA) and Gulf of Mexico (GOM) by vertical gear types including hydraulic/electric reel, rod and reel, and handline. Snapper caught by bottom longline in the GOM and SA will not be discussed since it makes up a statistically insignificant proportion of the total snapper catch in the GOM and in the SA bottom longline fishing in waters shallower than 50 fathoms, where snapper are generally caught, is prohibited. -
Florida Recreational Saltwater Fishing Regulations
Florida Recreational Issued: July 2020 New regulations are highlighted in red Saltwater Fishing Regulations (please visit: MyFWC.com/Fishing/Saltwater/Recreational Regulations apply to state waters of the Gulf and Atlantic for the most current regulations) All art: © Diane Rome Peebles, except snowy grouper (Duane Raver) Reef Fish Snapper General Snapper Regulations: • Snapper Aggregate Bag Limit - Within state waters ul of the Atlantic and Gulf, Snapper, Cubera u l Snapper, Red u l X Snapper, Vermilion X Snapper, Lane u l all species of snapper are Minimum Size Limits: Minimum Size Limits: Minimum Size Limits: Minimum Size Limits: included in a 10 fish per • Atlantic and Gulf - 12" (see below) • Atlantic - 20" • Atlantic - 12" • Atlantic and Gulf - 8" harvester per day aggregate • Gulf - 16" • Gulf - 10" bag limit in any combination Daily Recreational Bag Limit: Daily Recreational Bag Limit: of snapper species, unless • Atlantic and Gulf - 10 per harvester Season: Daily Recreational Bag Limit: • Atlantic - 10 per harvester stated otherwise. under 30", included within snapper • Atlantic - Open year-round • Atlantic - 5 per harvester not included • Gulf - 100 pounds per harvester, not • Seasons – If no seasonal aggregate bag limit • Gulf - Open June 11–July 25 within snapper aggregate bag limit included within snapper aggregate • May additionally harvest up to 2 over • Gulf - 10 per harvester not included bag limit information is provided, the Daily Recreational Bag Limit: species is open year-round. 30" per harvester or vessel-whichever within snapper aggregate bag limit is less-, and these 2 fish over 30" are • Atlantic and Gulf - 2 per harvester not included within snapper aggregate • Gulf - Zero daily bag and possession limit bag limit for captain and crew on for-hire vessels. -
Florida Recreational Saltwater Fishing Regulations
Issued: July 2015 Florida Recreational New regulations are highlighted in red Regulations apply to state waters of the Gulf and Atlantic Saltwater Fishing Regulations (please visit: MyFWC.com/Fishing/Saltwater/Recreational for the most current regulations) All art: © Diane Rome Peebles, except snowy grouper (Duane Raver) Reef Fish Snappers General Snappers Regulations: • Within state waters of the Atlantic and Gulf, the snapper aggregate bag limit is 10 fish ● ● ● ● per harvester unless the species Snapper, Cubera Snapper, Red Snapper, Vermilion Snapper, Lane rule specifies that it is not Minimum Size Limits: Minimum Size Limits: Minimum Size Limits: Minimum Size Limits: included in the aggregate. This • Atlantic and Gulf - 12" (see remarks) • Atlantic - 20" • Atlantic - 12" • Atlantic and Gulf - 8" means that a harvester can • Gulf - 16" • Gulf - 10" retain a total of 10 snappers Daily Recreational Bag Limit: Daily Recreational Bag Limit: in any combination of species. • Atlantic and Gulf - 10 per harvester Season: Daily Recreational Bag Limit: • Atlantic - 10 per harvester • Atlantic - Open year-round • Atlantic - 5 per harvester • Gulf - 100 pounds (see remarks) Exceptions are noted below. Remarks • Gulf - May 23–July 12; Sept. 5, 6, 7; • Gulf - 10 per harvester • If no season information is • May possess no more than 2 over Remarks and every Saturday and Sunday in included, the species is open 30" per harvester or vessel per day, Remarks • Gulf not included within the snapper Sept. and Oct.; and Nov. 1 year-round. whichever is less. 30" or larger not • Not included within the snapper aggregate bag limit. included within the snapper aggregate Daily Recreational Bag Limit: aggregate bag limit. -
Fishing Down Coastal Food Webs in the Gulf of California
Fisheries ISSN: 0363-2415 (Print) 1548-8446 (Online) Journal homepage: http://www.tandfonline.com/loi/ufsh20 Fishing Down Coastal Food Webs in the Gulf of California Enric Sala , Octavio Aburto-Oropeza , Miriam Reza , Gustavo Paredes & Luis G. López-Lemus To cite this article: Enric Sala , Octavio Aburto-Oropeza , Miriam Reza , Gustavo Paredes & Luis G. López-Lemus (2004) Fishing Down Coastal Food Webs in the Gulf of California, Fisheries, 29:3, 19-25, DOI: 10.1577/1548-8446(2004)29[19:FDCFWI]2.0.CO;2 To link to this article: http://dx.doi.org/10.1577/1548-8446(2004)29[19:FDCFWI]2.0.CO;2 Published online: 09 Jan 2011. Submit your article to this journal Article views: 361 View related articles Citing articles: 53 View citing articles Full Terms & Conditions of access and use can be found at http://www.tandfonline.com/action/journalInformation?journalCode=ufsh20 Download by: [The University of British Columbia] Date: 09 May 2016, At: 08:31 Fishing down coastal food webs in the Gulf of California We usedinformation from interviewswith fishers,fisheries statistics, and field surveysto doc- ument changesin fisheriesand fish assemblagesin shallowcoastal habitats in the Gulf of California, Mexico. Coastal food webs in the Gulf of California have been "fished down" dur- ing the last 30 years--fisheriesshifted from large, long-livedspecies belonging to high trophic levelsto smallshort-lived species from lower trophic levels.In addition,the maximum individuallength of the landingshas decreased about 45 cm in only 20 years.Although some catchesare stagnantor stillincreasing for somespecies groups, catch-per-unit-effort declined for mostspecies groups after 1980.These declines were associatedto a dramatic increasein fishingeffort in the region in the late 1970s-early1980s, mostly in the numberof gillnets.