Alarm Calls Evoke a Visual Search Image of a Predator in Birds
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ED45E Rare and Scarce Species Hierarchy.Pdf
104 Species 55 Mollusc 8 Mollusc 334 Species 181 Mollusc 28 Mollusc 44 Species 23 Vascular Plant 14 Flowering Plant 45 Species 23 Vascular Plant 14 Flowering Plant 269 Species 149 Vascular Plant 84 Flowering Plant 13 Species 7 Mollusc 1 Mollusc 42 Species 21 Mollusc 2 Mollusc 43 Species 22 Mollusc 3 Mollusc 59 Species 30 Mollusc 4 Mollusc 59 Species 31 Mollusc 5 Mollusc 68 Species 36 Mollusc 6 Mollusc 81 Species 43 Mollusc 7 Mollusc 105 Species 56 Mollusc 9 Mollusc 117 Species 63 Mollusc 10 Mollusc 118 Species 64 Mollusc 11 Mollusc 119 Species 65 Mollusc 12 Mollusc 124 Species 68 Mollusc 13 Mollusc 125 Species 69 Mollusc 14 Mollusc 145 Species 81 Mollusc 15 Mollusc 150 Species 84 Mollusc 16 Mollusc 151 Species 85 Mollusc 17 Mollusc 152 Species 86 Mollusc 18 Mollusc 158 Species 90 Mollusc 19 Mollusc 184 Species 105 Mollusc 20 Mollusc 185 Species 106 Mollusc 21 Mollusc 186 Species 107 Mollusc 22 Mollusc 191 Species 110 Mollusc 23 Mollusc 245 Species 136 Mollusc 24 Mollusc 267 Species 148 Mollusc 25 Mollusc 270 Species 150 Mollusc 26 Mollusc 333 Species 180 Mollusc 27 Mollusc 347 Species 189 Mollusc 29 Mollusc 349 Species 191 Mollusc 30 Mollusc 365 Species 196 Mollusc 31 Mollusc 376 Species 203 Mollusc 32 Mollusc 377 Species 204 Mollusc 33 Mollusc 378 Species 205 Mollusc 34 Mollusc 379 Species 206 Mollusc 35 Mollusc 404 Species 221 Mollusc 36 Mollusc 414 Species 228 Mollusc 37 Mollusc 415 Species 229 Mollusc 38 Mollusc 416 Species 230 Mollusc 39 Mollusc 417 Species 231 Mollusc 40 Mollusc 418 Species 232 Mollusc 41 Mollusc 419 Species 233 -
Biodiversity Climate Change Impacts Report Card Technical Paper 12. the Impact of Climate Change on Biological Phenology In
Sparks Pheno logy Biodiversity Report Card paper 12 2015 Biodiversity Climate Change impacts report card technical paper 12. The impact of climate change on biological phenology in the UK Tim Sparks1 & Humphrey Crick2 1 Faculty of Engineering and Computing, Coventry University, Priory Street, Coventry, CV1 5FB 2 Natural England, Eastbrook, Shaftesbury Road, Cambridge, CB2 8DR Email: [email protected]; [email protected] 1 Sparks Pheno logy Biodiversity Report Card paper 12 2015 Executive summary Phenology can be described as the study of the timing of recurring natural events. The UK has a long history of phenological recording, particularly of first and last dates, but systematic national recording schemes are able to provide information on the distributions of events. The majority of data concern spring phenology, autumn phenology is relatively under-recorded. The UK is not usually water-limited in spring and therefore the major driver of the timing of life cycles (phenology) in the UK is temperature [H]. Phenological responses to temperature vary between species [H] but climate change remains the major driver of changed phenology [M]. For some species, other factors may also be important, such as soil biota, nutrients and daylength [M]. Wherever data is collected the majority of evidence suggests that spring events have advanced [H]. Thus, data show advances in the timing of bird spring migration [H], short distance migrants responding more than long-distance migrants [H], of egg laying in birds [H], in the flowering and leafing of plants[H] (although annual species may be more responsive than perennial species [L]), in the emergence dates of various invertebrates (butterflies [H], moths [M], aphids [H], dragonflies [M], hoverflies [L], carabid beetles [M]), in the migration [M] and breeding [M] of amphibians, in the fruiting of spring fungi [M], in freshwater fish migration [L] and spawning [L], in freshwater plankton [M], in the breeding activity among ruminant mammals [L] and the questing behaviour of ticks [L]. -
Natural History of Japanese Birds
Natural History of Japanese Birds Hiroyoshi Higuchi English text translated by Reiko Kurosawa HEIBONSHA 1 Copyright © 2014 by Hiroyoshi Higuchi, Reiko Kurosawa Typeset and designed by: Washisu Design Office Printed in Japan Heibonsha Limited, Publishers 3-29 Kanda Jimbocho, Chiyoda-ku Tokyo 101-0051 Japan All rights reserved. No part of this publication may be reproduced or transmitted in any form or by any means without permission in writing from the publisher. The English text can be downloaded from the following website for free. http://www.heibonsha.co.jp/ 2 CONTENTS Chapter 1 The natural environment and birds of Japan 6 Chapter 2 Representative birds of Japan 11 Chapter 3 Abundant varieties of forest birds and water birds 13 Chapter 4 Four seasons of the satoyama 17 Chapter 5 Active life of urban birds 20 Chapter 6 Interesting ecological behavior of birds 24 Chapter 7 Bird migration — from where to where 28 Chapter 8 The present state of Japanese birds and their future 34 3 Natural History of Japanese Birds Preface [BOOK p.3] Japan is a beautiful country. The hills and dales are covered “satoyama”. When horsetail shoots come out and violets and with rich forest green, the river waters run clear and the moun- cherry blossoms bloom in spring, birds begin to sing and get tain ranges in the distance look hazy purple, which perfectly ready for reproduction. Summer visitors also start arriving in fits a Japanese expression of “Sanshi-suimei (purple mountains Japan one after another from the tropical regions to brighten and clear waters)”, describing great natural beauty. -
Range Overlap Drives Chromosome Inversion Fixation in Passerine Birds 4 5 Daniel M
bioRxiv preprint doi: https://doi.org/10.1101/053371; this version posted May 14, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 1 2 3 Range Overlap Drives Chromosome Inversion Fixation in Passerine Birds 4 5 Daniel M. Hooper1,2 6 7 1Commitee on Evolutionary Biology, University of Chicago, Chicago, Illinois 60637 8 2 E-mail: [email protected] 9 10 11 Friday, May 6, 2016 12 13 14 Short title: Chromosomal inversions in passerine birds bioRxiv preprint doi: https://doi.org/10.1101/053371; this version posted May 14, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 2 15 Chromosome inversions evolve frequently but the reasons why remain largely enigmatic. I 16 used cytological descriptions of 410 species of passerine birds (order Passeriformes) to 17 identify pericentric inversion differences between species. Using a new fossil-calibrated 18 phylogeny I examine the phylogenetic, demographic, and genomic context in which these 19 inversions have evolved. The number of inversion differences between closely related 20 species was highly variable yet consistently predicted by a single factor: whether the 21 ranges of species overlapped. This observation holds even when the analysis is restricted 22 to sympatric sister pairs known to hybridize, and which have divergence times estimated 23 similar to allopatric pairs. -
Egg Recognition in Cinereous Tits (Parus Cinereus): Eggshell Spots Matter Jianping Liu1 , Canchao Yang1 , Jiangping Yu2,3 , Haitao Wang2,4 and Wei Liang1*
Liu et al. Avian Res (2019) 10:37 https://doi.org/10.1186/s40657-019-0178-1 Avian Research RESEARCH Open Access Egg recognition in Cinereous Tits (Parus cinereus): eggshell spots matter Jianping Liu1 , Canchao Yang1 , Jiangping Yu2,3 , Haitao Wang2,4 and Wei Liang1* Abstract Background: Brood parasitic birds such as cuckoos (Cuculus spp.) can reduce their host’s reproductive success. Such selection pressure on the hosts has driven the evolution of defense behaviors such as egg rejection against cuckoo parasitism. Studies have shown that Cinereous Tits (Parus cinereus) in China have a good ability for recognizing foreign eggs. However, it is unclear whether egg spots play a role in egg recognition. The aims of our study were to inves- tigate the egg recognition ability of two Cinereous Tit populations in China and to explore the role of spots in egg recognition. Methods: To test the efect of eggshell spots on egg recognition, pure white eggs of the White-rumped Munia (Lon- chura striata) and eggs of White-rumped Munia painted with red brown spots were used to simulate experimental parasitism. Results: Egg experiments showed that Cinereous Tits rejected 51.5% of pure white eggs of the White-rumped Munia, but only 14.3% of spotted eggs of the White-rumped Munia. There was a signifcant diference in egg recognition and rejection rate between the two egg types. Conclusions: We conclude that eggshell spots on Cinereous Tit eggs had a signaling function and may be essential to tits for recognizing and rejecting parasitic eggs. Keywords: Brood parasitism, Egg recognition, Egg rejection, Eggshell spots, Parus cinereus Background egg rejection by hosts, many parasitic birds evolve coun- Te mutual adaptations and counter-defense strategies ter-adaptations to overcome the hosts’ defenses by laying between brood parasitic birds such as cuckoos (Cuculus mimicking (Brooke and Davies 1988; Avilés et al. -
Historical Biogeography of Tits (Aves: Paridae, Remizidae)
Org Divers Evol (2012) 12:433–444 DOI 10.1007/s13127-012-0101-7 ORIGINAL ARTICLE Historical biogeography of tits (Aves: Paridae, Remizidae) Dieter Thomas Tietze & Udayan Borthakur Received: 29 March 2011 /Accepted: 7 June 2012 /Published online: 14 July 2012 # Gesellschaft für Biologische Systematik 2012 Abstract Tits (Aves: Paroidea) are distributed all over the reconstruction methods produced similar results, but those northern hemisphere and tropical Africa, with highest spe- which consider the likelihood of the transition from one cies numbers in China and the Afrotropic. In order to find area to another should be preferred. out if these areas are also the centers of origin, ancestral areas were reconstructed based on a molecular phylogeny. Keywords Lagrange . S-DIVA . Weighted ancestral area The Bayesian phylogenetic reconstruction was based on analysis . Mesquite ancestral states reconstruction package . sequences for three mitochondrial genes and one nuclear Passeriformes gene. This phylogeny confirmed most of the results of previous studies, but also indicated that the Remizidae are not monophyletic and that, in particular, Cephalopyrus Introduction flammiceps is sister to the Paridae. Four approaches, parsimony- and likelihood-based ones, were applied to How to determine where a given taxon originated has long derive the areas occupied by ancestors of 75 % of the extant been a problem. Darwin (1859) and his followers (e.g., species for which sequence data were available. The Matthew 1915) considered the center of origin to simulta- common ancestor of the Paridae and the Remizidae neously be the diversity hotspot and had the concept of mere inhabited tropical Africa and China. The Paridae, as well dispersal of species out of this area—even if long distances as most of its (sub)genera, originated in China, but had to be covered. -
Prioritizing Green Spaces for Biodiversity Conservation in Beijing Based on Habitat Network Connectivity
sustainability Article Prioritizing Green Spaces for Biodiversity Conservation in Beijing Based on Habitat Network Connectivity Zhiyuan Lv 1, Jun Yang 1,2, Ben Wielstra 3,4, Jie Wei 1, Fei Xu 1 and Yali Si 1,5,* 1 Ministry of Education Key Laboratory for Earth System Modelling, Department of Earth System Science, Tsinghua University, Beijing 100084, China; [email protected] (Z.L.); [email protected] (J.Y.); [email protected] (J.W.); [email protected] (F.X.) 2 Joint Center for Global Change Studies (JCGCS), Beijing 100875, China 3 Institute of Biology Leiden, Leiden University, P.O. Box 9500, 2300 RA Leiden, The Netherlands; [email protected] 4 Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands 5 Center for Healthy Cities, Institute for China Sustainable Urbanization, Tsinghua University, Beijing 100084, China * Correspondence: [email protected]; Tel.: +86-010-62772750 Received: 19 February 2019; Accepted: 2 April 2019; Published: 5 April 2019 Abstract: Rapid urbanization results in changes in land use, biogeochemical cycles, climate, hydrosystems, and biodiversity. Policy-makers have formulated ecological protection measures to facilitate sustainable development. However, traditional conservation planning mainly focuses on protecting specific green spaces, with limited consideration of the connectivity among green spaces from a habitat network perspective. Using citizen science data and occupancy modelling, we predicted habitat suitability, built habitat networks and identified key habitat patches based on their contribution to the functional connectivity of the habitat network for three focal water, forest, and open-habitat bird species. Based on the habitat requirement, small waterbodies and intermediate forest and open-habitat cover facilitate preserving water, forest and open-habitat birds. -
Japan in Winter January 13–25, 2018
JAPAN IN WINTER JANUARY 13–25, 2018 Japanese (Red-crowned) Cranes dancing. Photo: S. Hilty LEADERS: KAZ SHINODA & STEVE HILTY with KOJI NIIYA one morning on HOKKAIDO LIST COMPILED BY: STEVE HILTY VICTOR EMANUEL NATURE TOURS, INC. 2525 WALLINGWOOD DRIVE, SUITE 1003 AUSTIN, TEXAS 78746 WWW.VENTBIRD.COM JAPAN IN WINTER: A CRANE & SEA-EAGLE SPECTACLE! By Steve Hilty One of the top highlights mentioned by most members of the group was a Ural Owl sleeping in a large, picturesque tree hollow. It was, in fact, an image that could have been plucked straight from an illustrated book of fairy tales from the Middle Ages. A male Eurasian Bullfinch in beautiful morning light also garnered top honors and, surprisingly, so did the diminutive Japanese Pygmy Woodpecker. For several of us, a large flock of Rooks eluding repeated prey- capture attempts by a Peregrine Falcon (the Rooks being more capable and wily than they might appear) over a large expanse of rice paddies was a trip highlight. Also prized were more than a dozen Stellar’s and White-tailed sea-eagles perched on a forested Hokkaido hillside during a snowstorm. The arrival of a Blakiston’s Fish-Owl at a small pool resulted in a mass exodus from our rather sedate and stylized Japanese dinner. And yes, then there were the Japanese Cranes, lumps of black and white fluff standing in a frigid river as steamy mists from the thermally- heated river water rose around them—a surreal and unforgettable setting. Surprisingly, perhaps, the Mandarin Ducks received not a single nod at the end—perhaps because they were a little distant—although they generated much excitement the morning we saw them, and the image of a stately pair cruising steadily across a mirror-smooth lake in early morning light, their narrow wake line trailing behind, will not likely be forgotten. -
Comparative Analysis of Hissing Calls in Five Tit Species Li Zhang, Jianping Liu, Zezhong Gao, Lei Zhang, Dongmei Wan, Wei Liang, Anders Pape Møller
Comparative analysis of hissing calls in five tit species Li Zhang, Jianping Liu, Zezhong Gao, Lei Zhang, Dongmei Wan, Wei Liang, Anders Pape Møller To cite this version: Li Zhang, Jianping Liu, Zezhong Gao, Lei Zhang, Dongmei Wan, et al.. Comparative analysis of hissing calls in five tit species. Behavioural Processes, Elsevier, 2019. hal-03024634 HAL Id: hal-03024634 https://hal-cnrs.archives-ouvertes.fr/hal-03024634 Submitted on 25 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Comparative analysis of hissing calls in five tit species 1 2 1 1 1, * 2 Li Zhang , Jianping Liu , Zezhong Gao , Lei Zhang , Dongmei Wan , Wei 2, * 3 3 Liang , Anders Pape Møller 1 4 Key Laboratory of Animal Resource and Epidemic Disease Prevention, 5 College of Life Sciences, Liaoning University, Shenyang 110036, China 2 6 Ministry of Education Key Laboratory for Ecology of Tropical Islands, 7 College of Life Sciences, Hainan Normal University, Haikou 571158, China 3 8 Ecologie Systématique Evolution, Université Paris-Sud, CNRS, 9 AgroParisTech, Université Paris-Saclay, F-91405 Orsay Cedex, France 10 Email address: 11 LZ, [email protected], ID: 0000-0003-1224-7855 12 JL, [email protected], ID: 0000-0001-6526-8831 13 ZG, [email protected] 14 LZ, [email protected], ID: 0000-0003-2328-1194 15 DW, [email protected], ID: 0000-0002-1465-6110 16 WL, [email protected], ID: 0000-0002-0004-9707 17 APM, [email protected], ID: 0000-0003-3739-4675 18 Word count: 4571 19 *Corresponding author. -
Divergent and Parallel Routes of Biochemical Adaptation in High-Altitude Passerine Birds from the Qinghai-Tibet Plateau
Divergent and parallel routes of biochemical adaptation in high-altitude passerine birds from the Qinghai-Tibet Plateau Xiaojia Zhua,b,1, Yuyan Guana,b,1, Anthony V. Signorec, Chandrasekhar Natarajanc, Shane G. DuBayd,e, Yalin Chenga,b, Naijian Hana, Gang Songa, Yanhua Qua, Hideaki Moriyamac, Federico G. Hoffmannf,g, Angela Fagoh, Fumin Leia,b,2, and Jay F. Storzc,2 aKey Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, 100101 Beijing, China; bUniversity of Chinese Academy of Sciences, 100049 Beijing, China; cSchool of Biological Sciences, University of Nebraska, Lincoln, NE 68588; dCommittee on Evolutionary Biology, University of Chicago, Chicago, IL 60637; eLife Sciences Section, Integrative Research Center, Field Museum of Natural History, Chicago, IL 60605; fDepartment of Biochemistry, Molecular Biology, Entomology, and Plant Pathology, Mississippi State University, Mississippi State, MS 39762; gInstitute for Genomics, Biocomputing and Biotechnology, Mississippi State University, Mississippi State, MS 39762; and hDepartment of Bioscience, Aarhus University, DK-8000 Aarhus, Denmark Edited by Cynthia M. Beall, Case Western Reserve University, Cleveland, OH, and approved January 17, 2018 (received for review November 25, 2017) When different species experience similar selection pressures, the native species have followed similar or different routes of high- probability of evolving similar adaptive solutions may be influenced altitude adaptation (2). The two highest elevation plateaus in the by legacies of evolutionary history, such as lineage-specific changes world, the Andean Altiplano in South America and the Qinghai- in genetic background. Here we test for adaptive convergence in Tibet Plateau in Asia, have very different physiographic and hemoglobin (Hb) function among high-altitude passerine birds that biogeographic histories and are inhabited by members of phy- are native to the Qinghai-Tibet Plateau, and we examine whether logenetically distinct faunas. -
Okinawa Custom Tour 14Th – 17Th April, 2016
Okinawa Custom tour 14th – 17th April, 2016 Tour leader: Charley Hesse Report and photos by Charley Hesse. (All photos were taken on this tour) The endangered endemic Okinawa Rail is a ‘must see’ on the island (Charley Hesse) This short custom extension was run prior to the Taiwan set departure tour. We just visited the main island of Okinawa where we concentrated on the forested north of the island with the local name ‘Yambaru’. Our main targets were the endemic Okinawa Woodpecker & Okinawa Rail, the latter only described as recently as 1981. We saw both easily, but we were also happy to see the endemic Ryukyu Robin & Ryukyu Minivet and several Ryukyu endemic subspecies, including Japanese & Ryukyu Scops-Owls, Whistling Green-Pigeon and Japanese Wood-Pigeon. We enjoyed fantastic birding and some great night excursions on which we saw several owl species, woodcock, the rare Ryukyu long-furred rat and beautiful Akamata snake. Our lodge was perfectly located in the native forests with all the targets on our doorstep. We were lucky to have the lodge to ourselves and the very friendly and helpful staff cooked us some wonderful Japanese food. After cleaning up in the north, we birded our way back to the capital Naha, hitting several areas of rice paddies and mudflats on the way back. We saw several interesting species such as Ruddy-breasted Crake, Yellow Bittern plus the endangered East Asian endemic Black-faced Spoonbill. Tropical Birding www.tropicalbirding.com 1 14th April – Naha to Yambaru On arrival in Okinawa, we began our drive north. We left the concrete sprawl of Naha and drove along beautiful coasts towards the forested hills near Kunigami village, or its local name ‘Yambaru’. -
A Study on Genetic Differentiation and Phylogenetic Relationships Among East Asian Titmice (Family Paridae) and Relatives
Jpn. J. Ornithol. 48: 205-218, 2000 A Study on Genetic Differentiation and Phylogenetic Relationships among East Asian Titmice (Family Paridae) and Relatives Noriko OHTA1,2,Seiji KUSUHARA1and Ryozo KAKIZAWA2 1 Graduate School of Science and Technology, Niigata University. Ninomachi 8050,Igarashi, Niigata-shi, Niigata 950-2181,Japan 2 Yamashina Institute for Ornithology, Konoyama 115, Abiko-shi, Chiba 270-1145,Japan By means of protein electrophoresis on 23 loci (15 enzymes), genetic variation and differentiation among eight East Asian Titmice (family Paridae, genus Parus), two long-tailed tits (family Aegithalidae, genus Aegithalos), a nuthatch (family Sittidae, Sitta) and Bearded Tit (family Paradoxornithidae, genus Panurus) were analyzed. A genealogic dendrogram is constructed by the UPGMA method, using genetic distances among the species. The results of the present study suggests that the East Asian Parus species investigated can be divided into four groups, i.e., groups consisting of (1) Parus montanus, (2) P. ater, P. venustulus and P. varius, (3) P. major and P. monticolus, and (4) P. spilonotus and P. holsti. P. spilonotus seems to have a close relationship to P. holsti, but distant relationships to P. major and P. monticolus. Aegithalos, Sitta and Panurus are relatively closely related to each other, whereas the Parus species are shown to have a family level genetic distance in the Passeriformes. In this study, we could not get enough samples of some species (espe- cially P. montanus and P. spilonotus). And since we obtained samples from dealers, there are some possibility that samples were collected from only one population of each species. The data of other samples from several populations and that of other species are needed to determine the phylogeny of the East Asian Parus species.