Stable Isotope Analysis Reveals Trophic Diversity and Partitioning in Territorial Damselfshes on a Low‑Latitude Coral Reef
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Coral Reef Monitoring in Kofiau and Boo Islands Marine Protected Area, Raja Ampat, West Papua. 2009—2011
August 2012 Indo-Pacific Division Indonesia Report No 6/12 Coral Reef Monitoring in Kofiau and Boo Islands Marine Protected Area, Raja Ampat, West Papua. 2009—2011 Report Compiled By: Purwanto, Muhajir, Joanne Wilson, Rizya Ardiwijaya, and Sangeeta Mangubhai August 2012 Indo-Pacific Division Indonesia Report No 6/12 Coral Reef Monitoring in Kofiau and Boo Islands Marine Protected Area, Raja Ampat, West Papua. 2009—2011 Report Compiled By: Purwanto, Muhajir, Joanne Wilson, Rizya Ardiwijaya, and Sangeeta Mangubhai Published by: TheNatureConservancy,Indo-PacificDivision Purwanto:TheNatureConservancy,IndonesiaMarineProgram,Jl.Pengembak2,Sanur,Bali, Indonesia.Email: [email protected] Muhajir: TheNatureConservancy,IndonesiaMarineProgram,Jl.Pengembak2,Sanur,Bali, Indonesia.Email: [email protected] JoanneWilson: TheNatureConservancy,IndonesiaMarineProgram,Jl.Pengembak2,Sanur,Bali, Indonesia. RizyaArdiwijaya:TheNatureConservancy,IndonesiaMarineProgram,Jl.Pengembak2,Sanur, Bali,Indonesia.Email: [email protected] SangeetaMangubhai: TheNatureConservancy,IndonesiaMarineProgram,Jl.Pengembak2, Sanur,Bali,Indonesia.Email: [email protected] Suggested Citation: Purwanto,Muhajir,Wilson,J.,Ardiwijaya,R.,Mangubhai,S.2012.CoralReefMonitoringinKofiau andBooIslandsMarineProtectedArea,RajaAmpat,WestPapua.2009-2011.TheNature Conservancy,Indo-PacificDivision,Indonesia.ReportN,6/12.50pp. © 2012012012201 222 The Nature Conservancy AllRightsReserved.Reproductionforanypurposeisprohibitedwithoutpriorpermission. AllmapsdesignedandcreatedbyMuhajir. CoverPhoto: -
Stationary Source Control Techniques Document for Fine Particulate Matter
Stationary Source Control Techniques Document for Fine Particulate Matter EPA CONTRACT NO. 68-D-98-026 WORK ASSIGNMENT NO. 0-08 Prepared for: Mr. Kenneth Woodard Integrated Policy and Strategies Group (MD-15) Air Quality Strategies and Standards Division U.S. Environmental Protection Agency Research Triangle Park, North Carolina 27711 October 1998 Submitted by: EC/R Incorporated Timberlyne Center 1129 Weaver Dairy Road Chapel Hill, North Carolina 27514 Disclaimer This report has been reviewed by the Office of Air Quality Planning and Standards, U.S. Environmental Protection Agency, and has been approved for publication. Mention of trade names or commercial products is not intended to constitute endorsement or recommendation for use. Copies Copies of this document are available through the Library Services Office (MD-35), U.S. Environmental Protection Agency, Research Triangle Park, NC 27711; or from the National Technical Information Service, 5285 Port Royal Road, Springfield, VA 22161 (for a fee). This document can also be found on the Internet at the U.S. Environmental Protection Agency website (http:\\www.epa.gov/ttn/oarpg). ii CONTENTS TABLES .................................................................... ix FIGURES ................................................................... xi 1 INTRODUCTION .....................................................1-1 1.1 PURPOSE OF THIS DOCUMENT ..................................1-1 1.2 OTHER RESOURCES ............................................1-1 1.3 ORGANIZATION ...............................................1-1 -
Phylogeny of the Damselfishes (Pomacentridae) and Patterns of Asymmetrical Diversification in Body Size and Feeding Ecology
bioRxiv preprint doi: https://doi.org/10.1101/2021.02.07.430149; this version posted February 8, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Phylogeny of the damselfishes (Pomacentridae) and patterns of asymmetrical diversification in body size and feeding ecology Charlene L. McCord a, W. James Cooper b, Chloe M. Nash c, d & Mark W. Westneat c, d a California State University Dominguez Hills, College of Natural and Behavioral Sciences, 1000 E. Victoria Street, Carson, CA 90747 b Western Washington University, Department of Biology and Program in Marine and Coastal Science, 516 High Street, Bellingham, WA 98225 c University of Chicago, Department of Organismal Biology and Anatomy, and Committee on Evolutionary Biology, 1027 E. 57th St, Chicago IL, 60637, USA d Field Museum of Natural History, Division of Fishes, 1400 S. Lake Shore Dr., Chicago, IL 60605 Corresponding author: Mark W. Westneat [email protected] Journal: PLoS One Keywords: Pomacentridae, phylogenetics, body size, diversification, evolution, ecotype Abstract The damselfishes (family Pomacentridae) inhabit near-shore communities in tropical and temperature oceans as one of the major lineages with ecological and economic importance for coral reef fish assemblages. Our understanding of their evolutionary ecology, morphology and function has often been advanced by increasingly detailed and accurate molecular phylogenies. Here we present the next stage of multi-locus, molecular phylogenetics for the group based on analysis of 12 nuclear and mitochondrial gene sequences from 330 of the 422 damselfish species. -
Stable Isotope Methods in Biological and Ecological Studies of Arthropods
eea_572.fm Page 3 Tuesday, June 12, 2007 4:17 PM DOI: 10.1111/j.1570-7458.2007.00572.x Blackwell Publishing Ltd MINI REVIEW Stable isotope methods in biological and ecological studies of arthropods CORE Rebecca Hood-Nowotny1* & Bart G. J. Knols1,2 Metadata, citation and similar papers at core.ac.uk Provided by Wageningen University & Research Publications 1International Atomic Energy Agency (IAEA), Agency’s Laboratories Seibersdorf, A-2444 Seibersdorf, Austria, 2Laboratory of Entomology, Wageningen University and Research Centre, P.O. Box 8031, 6700 EH Wageningen, The Netherlands Accepted: 13 February 2007 Key words: marking, labelling, enrichment, natural abundance, resource turnover, 13-carbon, 15-nitrogen, 18-oxygen, deuterium, mass spectrometry Abstract This is an eclectic review and analysis of contemporary and promising stable isotope methodologies to study the biology and ecology of arthropods. It is augmented with literature from other disciplines, indicative of the potential for knowledge transfer. It is demonstrated that stable isotopes can be used to understand fundamental processes in the biology and ecology of arthropods, which range from nutrition and resource allocation to dispersal, food-web structure, predation, etc. It is concluded that falling costs and reduced complexity of isotope analysis, besides the emergence of new analytical methods, are likely to improve access to isotope technology for arthropod studies still further. Stable isotopes pose no environmental threat and do not change the chemistry or biology of the target organism or system. These therefore represent ideal tracers for field and ecophysiological studies, thereby avoiding reductionist experimentation and encouraging more holistic approaches. Con- sidering (i) the ease with which insects and other arthropods can be marked, (ii) minimal impact of the label on their behaviour, physiology, and ecology, and (iii) environmental safety, we advocate more widespread application of stable isotope technology in arthropod studies and present a variety of potential uses. -
Pomacentridae)
Zoologischer Anzeiger 264 (2016) 47–55 Contents lists available at ScienceDirect Zoologischer Anzeiger jou rnal homepage: www.elsevier.com/locate/jcz Insight into biting diversity to capture benthic prey in damselfishes (Pomacentridae) Damien Olivier ∗, Eric Parmentier, Bruno Frédérich Laboratoire de Morphologie Fonctionnelle et Evolutive, AFFISH Research Center, Institut de Chimie (B6C) Université de Liege, B-4000 Liege, Belgium a r t i c l e i n f o a b s t r a c t Article history: The cerato-mandibular (c-md) ligament, joining the hyoid bar to the coronoid process of the angular, Received 9 May 2016 allows Pomacentridae to slam their mouth shut in a few milliseconds. Previous works have revealed that Received in revised form 13 July 2016 such a mechanism is used to feed, but some variability in biting patterns has been observed between two Accepted 13 July 2016 damselfish species. The pelagic feeder Amphiprion clarkii performs two different kinematic patterns to Available online 15 July 2016 bite fixed prey, one that does not depend on the c-md ligament (biting-1) and one that does (biting-2). The benthic feeder Stegastes rectifraenum only performs biting-2. The present study aims to shed light on Keywords: the occurrence of biting-2 in the feeding behaviour of Pomacentridae. To test our hypothesis that biting-2 Cerato-mandibular ligament would be the only biting pattern for benthic feeders, we compared biting behaviours among four species: Feeding behaviour one pelagic feeder, A. clarkii, and three benthic feeders, Neoglyphidodon nigroris, Stegastes leucostictus and Functional morphology Grazing S. rectifraenum. -
Trait Decoupling Promotes Evolutionary Diversification of The
Trait decoupling promotes evolutionary diversification of the trophic and acoustic system of damselfishes rspb.royalsocietypublishing.org Bruno Fre´de´rich1, Damien Olivier1, Glenn Litsios2,3, Michael E. Alfaro4 and Eric Parmentier1 1Laboratoire de Morphologie Fonctionnelle et Evolutive, Applied and Fundamental Fish Research Center, Universite´ de Lie`ge, 4000 Lie`ge, Belgium 2Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland Research 3Swiss Institute of Bioinformatics, Ge´nopode, Quartier Sorge, 1015 Lausanne, Switzerland 4Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA Cite this article: Fre´de´rich B, Olivier D, Litsios G, Alfaro ME, Parmentier E. 2014 Trait decou- Trait decoupling, wherein evolutionary release of constraints permits special- pling promotes evolutionary diversification of ization of formerly integrated structures, represents a major conceptual the trophic and acoustic system of damsel- framework for interpreting patterns of organismal diversity. However, few fishes. Proc. R. Soc. B 281: 20141047. empirical tests of this hypothesis exist. A central prediction, that the tempo of morphological evolution and ecological diversification should increase http://dx.doi.org/10.1098/rspb.2014.1047 following decoupling events, remains inadequately tested. In damselfishes (Pomacentridae), a ceratomandibular ligament links the hyoid bar and lower jaws, coupling two main morphofunctional units directly involved in both feeding and sound production. Here, we test the decoupling hypothesis Received: 2 May 2014 by examining the evolutionary consequences of the loss of the ceratomandib- Accepted: 9 June 2014 ular ligament in multiple damselfish lineages. As predicted, we find that rates of morphological evolution of trophic structures increased following the loss of the ligament. -
SKIMMER 2014-4.Pdf
SKIMMER 2014-4 ddd3 The Wayfarer United States Wayfarer Association Fall 2014-4 As Few Words As Possible So, thank you all. I accept, reassured in the knowledge From Your Vice Commodore that bad publicity is better than no publicity at all. Chip Cunningham, W1321, Solje What can go wrong? Right off the bat I’ve felt “Are we going to keep sailing together?” Nick asked. comfortable with the Wayfarer community, but I’m “Of course,” I answered without giving it much still on the steep part of the learning curve for thought. Wayfarer boats and sailing. I hope my perspective is an interesting way to promote the U.S. Wayfarer “You know, as helm I decide what you do, right?” Association because sailing these boats is such a good “What are you getting at, Nick?” reason for us to keep getting together. “You are going to take over from me as Vice Commodore.” And so began another day of sailing with Nick. COMMODORE COMMENTS Jim Heffernan, W1066, W2458 An organization such as the USWA is made up of volunteers who take on projects and events and those that serve as officers or committee members. The Wayfarer Class and the USWA have been very fortunate since the mid sixties to have Nick Seraphinoff involved in both areas as a skipper of numerous Wayfarers, organizer of regattas, importer of new Wayfarers, Class promoter and until recently, Vice-Commodore. The Class continues to grow throughout North America due to his efforts over the past seven years. As he hands over the sword of office and the tri-cornered chapeau to Chip Cunningham, we Chip contemplates new duties as Vice Commodore. -
Reef Fishes of the Bird's Head Peninsula, West
Check List 5(3): 587–628, 2009. ISSN: 1809-127X LISTS OF SPECIES Reef fishes of the Bird’s Head Peninsula, West Papua, Indonesia Gerald R. Allen 1 Mark V. Erdmann 2 1 Department of Aquatic Zoology, Western Australian Museum. Locked Bag 49, Welshpool DC, Perth, Western Australia 6986. E-mail: [email protected] 2 Conservation International Indonesia Marine Program. Jl. Dr. Muwardi No. 17, Renon, Denpasar 80235 Indonesia. Abstract A checklist of shallow (to 60 m depth) reef fishes is provided for the Bird’s Head Peninsula region of West Papua, Indonesia. The area, which occupies the extreme western end of New Guinea, contains the world’s most diverse assemblage of coral reef fishes. The current checklist, which includes both historical records and recent survey results, includes 1,511 species in 451 genera and 111 families. Respective species totals for the three main coral reef areas – Raja Ampat Islands, Fakfak-Kaimana coast, and Cenderawasih Bay – are 1320, 995, and 877. In addition to its extraordinary species diversity, the region exhibits a remarkable level of endemism considering its relatively small area. A total of 26 species in 14 families are currently considered to be confined to the region. Introduction and finally a complex geologic past highlighted The region consisting of eastern Indonesia, East by shifting island arcs, oceanic plate collisions, Timor, Sabah, Philippines, Papua New Guinea, and widely fluctuating sea levels (Polhemus and the Solomon Islands is the global centre of 2007). reef fish diversity (Allen 2008). Approximately 2,460 species or 60 percent of the entire reef fish The Bird’s Head Peninsula and surrounding fauna of the Indo-West Pacific inhabits this waters has attracted the attention of naturalists and region, which is commonly referred to as the scientists ever since it was first visited by Coral Triangle (CT). -
Ex-Situ Documentation of Ethnobiology
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by ScholarSpace at University of Hawai'i at Manoa Vol. 8 (2014), pp. 788–809 http://nflrc.hawaii.edu/ldc http://hdl.handle.net/10125/24626 Ex-situ Documentation of Ethnobiology Francesca Lahe-Deklin Australian National University Aung Si University of Melbourne Migrant speakers of endangered languages living in urban centers in developed coun- tries represent a valuable resource through which these languages may be conveniently documented. Here, we first present a general methodology by which linguists can com- pile a meaningful set of visual (and sometimes audio) stimuli with which to carry out a reasonably detailed ethnobiological elicitation session in an ‘ex-situ’ setting, such as an urban university. We then showcase some preliminary results of such an elicitation carried out on the Dumo, or Vanimo, language of north-western Papua New Guinea during a linguistic field methods course at the Australian National University. With the help of a region-specific set of visual stimuli obtained from various sources, it was possible to document many fascinating aspects of the fish, and other marine-biological, knowledge of Dumo speakers, along with detailed ethnographic notes on the cultural significance of marine creatures. 1. INTRODUCTION. Developed countries such as Australia and the United States of Amer- ica have, in recent decades, become home to numerous ethnic communities of speakers of small, inadequately described or endangered languages (Roberts 2010). The presence of large numbers of such migrants in major urban centers, such as New York, London, or Melbourne, provides exciting opportunities for collaborations between linguists and the speakers of endangered languages, wherein the former document the language of the latter without the great expense of having to travel to a distant, possibly remote, location. -
Measurement of the Isotopic Composition of Dissolved Iron in the Open Ocean F
Measurement of the isotopic composition of dissolved iron in the open ocean F. Lacan, Amandine Radic, Catherine Jeandel, Franck Poitrasson, Géraldine Sarthou, Catherine Pradoux, Remi Freydier To cite this version: F. Lacan, Amandine Radic, Catherine Jeandel, Franck Poitrasson, Géraldine Sarthou, et al.. Measure- ment of the isotopic composition of dissolved iron in the open ocean. Geophysical Research Letters, American Geophysical Union, 2008, pp.L24610. 10.1029/2008GL035841. hal-00399111 HAL Id: hal-00399111 https://hal.archives-ouvertes.fr/hal-00399111 Submitted on 15 Jul 2009 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Measurement of the Isotopic Composition of dissolved Iron in the Open Ocean 2 3 Lacan1 F., Radic1 A., Jeandel1 C., Poitrasson2 F., Sarthou3 G., Pradoux1 C., Freydier2 R. 4 5 1: CNRS, LEGOS, UMR5566, CNRS-CNES-IRD-UPS, Observatoire Midi-Pyrénées, 18, Av. 6 E. Belin, 31400 Toulouse, France. 7 2: LMTG, CNRS-UPS-IRD, 14-16, avenue Edouard Belin, 31400 Toulouse, France. 8 3: LEMAR, UMR CNRS 6539, IUEM, Technopole Brest Iroise, Place Nicolas Copernic, 9 29280 Plouzané, France. 10 11 Paper published in Geophysical Research Letters (2008) L24610. 12 We acknowledge Geophysical Research Letters and the American Geophysical Union copyright 13 14 This work demonstrates for the first time the feasibility of the measurement of the isotopic 15 composition of dissolved iron in seawater for a typical open ocean Fe concentration range 16 (0.1-1nM). -
Pomacentridae): Structural and Expression Variation in Opsin Genes
Molecular Ecology (2017) 26, 1323–1342 doi: 10.1111/mec.13968 Why UV vision and red vision are important for damselfish (Pomacentridae): structural and expression variation in opsin genes SARA M. STIEB,*† FABIO CORTESI,*† LORENZ SUEESS,* KAREN L. CARLETON,‡ WALTER SALZBURGER† and N. J. MARSHALL* *Sensory Neurobiology Group, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia, †Zoological Institute, University of Basel, Basel 4051, Switzerland, ‡Department of Biology, The University of Maryland, College Park, MD 20742, USA Abstract Coral reefs belong to the most diverse ecosystems on our planet. The diversity in col- oration and lifestyles of coral reef fishes makes them a particularly promising system to study the role of visual communication and adaptation. Here, we investigated the evolution of visual pigment genes (opsins) in damselfish (Pomacentridae) and exam- ined whether structural and expression variation of opsins can be linked to ecology. Using DNA sequence data of a phylogenetically representative set of 31 damselfish species, we show that all but one visual opsin are evolving under positive selection. In addition, selection on opsin tuning sites, including cases of divergent, parallel, conver- gent and reversed evolution, has been strong throughout the radiation of damselfish, emphasizing the importance of visual tuning for this group. The highest functional variation in opsin protein sequences was observed in the short- followed by the long- wavelength end of the visual spectrum. Comparative gene expression analyses of a subset of the same species revealed that with SWS1, RH2B and RH2A always being expressed, damselfish use an overall short-wavelength shifted expression profile. Inter- estingly, not only did all species express SWS1 – a UV-sensitive opsin – and possess UV-transmitting lenses, most species also feature UV-reflective body parts. -
Annotated Checklist of the Fishes of Wake Atoll1
Annotated Checklist ofthe Fishes ofWake Atoll 1 Phillip S. Lobel2 and Lisa Kerr Lobel 3 Abstract: This study documents a total of 321 fishes in 64 families occurring at Wake Atoll, a coral atoll located at 19 0 17' N, 1660 36' E. Ten fishes are listed by genus only and one by family; some of these represent undescribed species. The first published account of the fishes of Wake by Fowler and Ball in 192 5 listed 107 species in 31 families. This paper updates 54 synonyms and corrects 20 misidentifications listed in the earlier account. The most recent published account by Myers in 1999 listed 122 fishes in 33 families. Our field surveys add 143 additional species records and 22 new family records for the atoll. Zoogeo graphic analysis indicates that the greatest species overlap of Wake Atoll fishes occurs with the Mariana Islands. Several fish species common at Wake Atoll are on the IUCN Red List or are otherwise of concern for conservation. Fish pop ulations at Wake Atoll are protected by virtue of it being a U.S. military base and off limits to commercial fishing. WAKE ATOLL IS an isolated atoll in the cen and Strategic Defense Command. Conse tral Pacific (19 0 17' N, 1660 36' E): It is ap quentially, access has been limited due to the proximately 3 km wide by 6.5 km long and military mission, and as a result the aquatic consists of three islands with a land area of fauna of the atoll has not received thorough 2 approximately 6.5 km • Wake is separated investigation.