Chapter 10 Organic Reaction Mechanisms, Part 1: Reactions Involving Additions and/or Eliminations Addition reactions 10.2 Hydration of carbonyl structures
RO OR R R acetal 1 10.2.1 Acid-base catalysis
See section 9.3 2 10.2.2 The thermodynamics of the formation of geminal diols and hemiacetals
1. Ketones and aryl aldehydes: less than unity, favoring the carbonyl group 2. Aliphatic aldehydes, carbonyl structures with EWG, and carbonyls in strained rings: greater than unity 3. Aldehydes are more hydrated than ketones because steric congestion in the geminal diol is less. 4. EWG destabilize the already electrophilic carbonyl, leading to greater hydration. 5. Strained rings such as cyclobutanone prefer the sp3 hybridization of a hemiacetal carbon over the sp2 hybridization of a carbonyl carbon. -> smaller bond angle of an sp3 center3 better matches the bond angles in small rings. pyranose
0.003%
2-pyridone
4 10.3 Electrophilic addition of water to alkenes and alkynes: hydration
No scrambling of deuteriums -> the first step is not reversible
General acid catalysis: all forms of acid in the medium are reactive, and the protonation is rds
5 10.3.3 Regiochemistry H H
more stable; less activation energy
less stable product EDG: increase hydration rates EWG (Cl or CN): retard hydration rates
enamine
vinyl ether
6 involvement of a localized carbenium ion on the more substituted carbon 10.3.4 Alkyne hydration very similar to alkene hydrations
7 10.4 Electrophilic addition of hydrogen halides to alkenes and alkynes Two cases A
rearrangement
The product ratio depends on neither [HCl] nor [added Cl-]. If Cl- and HOAc compete for addition to a transient carbenium ion, one would expect increasing chloride concentrations to divert the intermediate to the formation of alkyl chloride products, but this is not seen.
Cl- diffusion is slower than rearrangement -> added Cl- does not affect the product ratio.
8 B The product ratio from the addition of HCl to cyclohexene in HOAc does depend on [added Cl-].
- Increase in added Cl ->this product Why? Consider stereochemistry of this reaction.
Second order reaction
9 Added Cl- increases in this product ratio. 10 10.4.3 Addition to alkynes Cl+
vinyl carbocation major product -> lower stability than trigonal sp2 carbenium ions -> addition of HX to alkynes is slower than with alkenes
Because of the lower stability of vinyl cations relative to alkyl carbenium ions, concerted reactions occur.
Anti addition product; predominantly
11 10.5 Electrophilic addition of halogens to alkenes
halonium ions
anti addition
F2; so exothermic, explosive Cl2; exothermic by 44 kcal/mol Br2; exothermic by 29 kcal/mol I2; near thermoneutral or endothermic -> readily reversible
12 anti addition 10.5.3 Other evidence supporting a σ complex
1. kinetics
hydration rates
If a non-bridging carbenium ion were formed, one would expect substituent effects similar to that seen for alkene hydration. -> but this is not the case. -> σ complex formation
13 2. Kinetic isotope effects
kH/kD = 0.53 (large inverse KIE -> significant rehybridization of both alkene carbons in rds) sp2 -> sp3
3. Addition of other nucleophiles other than bromide
Br Br
δ+ δ+ MeOH
4. Isolation of bromonium ions Steric hindrance impedes nucleophilic attack
14 anti syn
anti syn
Carbenium ions can be stabilized by resonance
15 the complex is formed rapidly prior to rds. 10.5.4 Mechanistic variants at low concentrations of bromine or in water and alcohol
In solvents of lower polarity, even acetic acid, the reaction is second order in bromine.
F2 addition -> syn addition
Carbocation rapidly combines with F- before dissociation of the ion pair. 16 10.5.5 Addition to alkynes Alkyl-substituted alkynes show anti addition products with bromine, again supporting a brominium ion intermediate. However, alkynes generally react 103 to 107 times slower than alkenes.
ring strain and positive charge on sp2 orbital
Aryl alkynes
ρ = -5.17 (large negative value) -> EDG 반응속도 증가-> vinyl cation intermediate
17 10.6 Hydroboration
THF
diborane borane
H2O2, NaOH
OH H syn addition
Addition of boron to a less hindered carbon
Addition; anti-Markovnikov product
18 10.7 Epoxidation mCPBA (m-chloroperbenzoic acid)
syn addition
The more electron rich the double bond, the faster it will react with the peracid. Sterics are the primary factor directing the epoxidation stereochemistry. The least hindered face of a double bond is predominantly epoxidized.
carbocation charater가크다; sp2 -> sp2 Almost no secondary KIE sp2 -> sp3 A relatively large inverse KIE
19 10.8 Nucleophilic additions to carbonyl compounds
Cyanohydrin formation
Aldehydes are more reactive than ketones because steric congestion in the cyanohydrin is less.
CN- is a very good nucleophile -> protonation is not required prior to or at rds rate = k[CN-][C=O] -> no dependence on acid 20 Grignard addition Extremely fast even at -85 oC
two electron nucleophile
For some carbonyl compounds
electron transfer mechanism: carbonyl structures that lead to stabilized ketyl anions will favor this mechanism, such as conjugate enones, phenyl ketones, and phenyl aldehydes. -> evidence; hydrogen abstraction products (B 첫번째) or radical coupling products (B 두번째) are formed.
21 Lithium aluminum hydride reduction
A lithium-specific cryptand
A lithium cation is involved in the reaction. 22 10.8.6 Conformational effects in additions to carbonyl compounds The addition of nucleophiles to carbonyl compounds is often found to occur faster with six-membered ring cyclic ketones than with acyclic ketones or cyclopentanones.
o Why? The dihedral angle between the Heq and the carbonyl oxygen is only 4 . This near eclipsing interaction produces a conformational strain of around 4 kcal/mol that raises the ground state energy of cyclohexanones relative to acyclic systems. Upon nucleophilic attack, this near eclipsing interaction is relieved, but we introduce a 1,3-diaxial interaction with an oxygen anion. However, the diaxial interaction is estimated to be only 0.7 kcal/mol destabilizing (the A value for an OH), and so the net effect is that a significant amount of strain has been released in this reaction.
Release of eclipsing interaction (4 kcal/mol) but increase in 1,3 diaxial interaction (0.7 kcal/mol) -> a significant amount of strain has been released
near eclipsing interaction
23 10.8.7 Stereochemistry of nucleophilic additions
Rs O Rs OH Rs OH Rm Rm R Nu + m R Rl R Rl R Rl Nu major minor
S기 쪽으로 공격
Cram’s model S기 쪽으로 공격 Karabatsos’ model
Felkin-Ahn model
24 Cram’s model
Felkin-Ahn model
25 Cyclic carbonyl structures
LAH reduction; trans -> major
Due to these strains, H- attacks more sterically hindered face of the ketone
1. 3번위치에H 이외의 치환기가 있으면 hydride 반응시 cis가 major 2. Larger Nu -> cis product as a major
due to steric hindrance
26 Meerwein-Pondorrf-Verley reduction (the reverse reaction is called the Oppennauer ocidation)
equilibrium
More stable
less stable
27 FAD: one electron and two electron reactions NADH(P): two electron (or hydride) reactions
28 10.9 Nucleophilic additions to alkenes
Much less favorable than a carbonyl. But when strongly EWG are placed on an alkene, nucleophilic addition can occur.
Michael addition (1,4 addition)
29 10.9.4 Baldwin’s rule
These rules allow chemists to predict the ease of ring closure reactions. Three factors are considered: 1. ring size, 2. hybridization of the carbon undergoing attack, 3. whether the bond undergoing attack will be endocyclic or exocyclic to the forming ring in the product.
The ease of intramolecular formation of a particular ring size generally followed the trend, 5> 6 > 3 > 7 > 4 > 8-10. This holds for intramolecular nucleophilic, as well as radical and cationic ring closures.
sp = digonal, sp2 = trigonal, sp3 = tetragonal
30 Nu
Nu Nu trigonal large distortion -> unfavorable
digonal Nu Nu
favorable
31 10.11 Carbene additions and insertions
Triplet states should be preferred at the linear geometry (Hund’s rule), and indeed it is. H-C-H angle becomes small enough -> singlet states Angle is 136o for the triplet and 105o for the singlet.
While simple carbenes have a triplet ground state, approapriate substituents can reverse this preference. -> carbenes with lone-pair donating substituents such as N, O, and halogens can have singlet ground states because of such an interactions
32 Singlet carbene addition to alkenes Triplet carbene addition to alkenes
Singlet carbene insertion into a C-H bond Triplet carbene insertion goes via radical abstraction followed by recombination
33 Carbene generation Thermal decomposition of diazoalkanes
Base-induced eleimination of nitrosourea N-nitrosourea
Base-induced eleimination of tosylhydrazone
Decomposition of diazirine
Base-induced alpha eleimination of haloform
All the thermal protocols described above initially form singlet carbenes, as do the photolysis of 34 diazo and diazirine compounds. The Simmons-Smith reagent (ICH2ZnI) also act as a carbene source. However, the reaction between CH2I2 and Zn does not generate a full-fledged free carbene, but instead a carbenoid.
Carbenoid is a carbene that is stabilized by complexation to a metal.
35 Mechanism Singlet carbenes give 100% stereospecific reactions (syn addition). Triplet carbenes give mixtures. spin flip
Triplet carbenes
triplet biradical
spin flip
- Stereochemistry of the alkene is typically not completely lost in the product, which indicates that the spin inversion and bond rotation rates must be comparable. - The more electron rich the alkene, the faster the carbene addition. - The dialkylcarbenes (more unstable) are less selective than dihalocarbenes or carbenes with neighboring N, O atoms. (more stable carbenes are more selective) - Carbenes are highly reactive species, and if an olefin or other addition partner is not available,36 carbenes will indiscriminately insert into C-H bonds. Eliminations 10.12 Eliminations to form carbonyls or carbonyl-like intermediates
acetal
Correct; 1. stereocenter in R -> retention 2. -18OR -> release in solution after reaction
37 10.12.3 Catalysis of the hydrolysis of acetals
Specific-acid catalyzed pathway: OR -> poor leaving groups
Not plausible pathway
General-acid catalyzed pathway: OR -> good leaving groups
38 10.12.4 Stereoelectronic effects
two antiperiplanar
39 10.12.5 CrO3 oxidation – The Jones reagent
(ClCO)2,DMSO H R OH pyridine R O Swern oxidation 40 10.14 Elimination reactions for aliphatic systems–formation of alkenes
E1 and E2 reactions E2: 1,2-elimination (β-elimination) and 1,4-elimination
E1:
1,2-elimination or β-elimination
l l 4 1,4-elimination 4 41 Acid-catalyzed 1,4-elimination Other types of elimination
oxidative addition of Zn to C-X bond
elimination of 1,2-dihaloalkanes
elimination of 1,4-dihaloalkanes
Reverse aldol reaction
Reverse Michael reaction
42 10.13.3 Contrasting elimination and substitution
1. Elimination will dominate if the carbon with the leaving group (LG) is not susceptible to nucleophilic attack, such as a tertiary R group. 2. E1 involves carbenium ion intermediates, and thus are facilitated by all the factors that stabilize carbenium
ions. These are the same factors that facilitate SN1 reactions. 3. In highly ionizing solvents and with R groups that readily form carbenium ions, the ratio of substitution to elimination products is typically independent of the LG. 4. In solents of lower ionizing power, the ratio of substitution to elimination products does depend on the LG.
43 10.13.4 E1cB
Any elimination that first form the conjugate base of the reactant is referred to as E1cB (elimination, unimolecular, conjugate base).
α-CH
44 10.13.7 Regiochemistry of elimination
- Saytzeff’s rule: the more substituted double bond will dominate, a common observation for both E2 and E1 reactions. -> Saytzeff elimination - Hofmann elimination: the product with the less substituted double bond is formed.
- Saytzeff’s rule: the more substituted double bond will dominate, a common observation for both E2 and E1 reactions. -> Saytzeff elimination - Hofmann elimination: the product with the less substituted double bond is formed. - With E1 reaction, Saytzeff elimination dominates because the transition state for proton removal from the carbenium ion has double bond character. - The rationalization for Sayzeff elimination in E2 reactions is similar to the reasoning for E1 reactions.
E1 E2
45 If there are severe steric factors that make the hydrogen on the more substituted carbon inaccessible, Hofmann elimination will dominate the product mixture.
H H
Elimination reactions with quaternary ammonium and sulfonium LG give preferential Hofmann elimination. 1. Steric hindrance by bulk quaternary ammonium and sulfonium LG, 2. The number of hydrogens to be removed 3. Electronic effects; a strongly electron withdrawing cationic LG creates a significant amount of positive charge on the neighboring hydrogens. However, electron donating alkyl group diminish this charge on the neighboring hydrogens, and thus the most positive hydrogens are those on the less substituted carbon -> preferential deprotonation of the less substituted carbon.
3H 1H
2H 3H
46 10.13.8 Stereochemistry of eliminations-orbital considerations
E1; in the low-ionizing solvent such as nitromethane -> gives only elimination products via a syn pathways; a contact ion pair is formed and the tosylate is the base that removes the proton. in more ionizing solvents such as aqueous ethanol, all four possible products are formed. 47 E2; anti elimination is preferred 1. conformational preferences, 2. orbital effect
eclipsed
(Bs = SO2C6H4Br)
48 E2; syn elimination can occur when one or more of the following circumstances occurs 1. a synperiplanar arrangement can be achieved but an an antiperiplananr one cannot
120o 2. The counterion of the base is ion paired with the base and the leaving group.
13% Addition of 18-crown-6 0%
3. Strong steric factors favor the syn pathway.
49 Antiperiplanar elimination
one product is observed
50 Two products are observed 10.13.9 Dehydration
10.13.10 Thermal elimination (pyrolysis) Only syn elimination
heat Cope elimination
N-oxides
Xanthate esters Chugaev elimination
Esters (400-450 oC) 51 52 Combining addition and elimination reactions (substitutions at sp2 centers)
53 10.15 The addition of nitrogen nucleophiles to carbonyl structures, followed by elimination Schiff base; unstable to be isolated. However, when aromatic groups are placed on either C or N, imines are stable to be often isolated. In addition, oximes (R’ = OH), semizarbazones (R’ = NHCONH2) Schiff base and hydrazone (R’ = NHR) are very stable.
54 10.15.2 Acid-base catalysis
Commonly bell-shaped pH versus rate profiles for imine and enamine formation.
55 carbinolamine
Strongly nucleophilic amines (hydroxylamines and alkylamines): A -> amines add directly at all pHs, but below pHs around 4 this direct addition becomes rds. This is because there is a low concentration of unprotonated amine present at low pHs. At the high pHs where the carbinolamine breakdown is rds, kobs decreases as the pH is increased. The rate has a maximum where the amine is present in high enough concentrations as the free base form to react with a reasonable rate, but there is also enough acid present to catalyze the elimination of water from the carbinolamine, hence the bell-shaped pH-rate profile. weakly nucleophilic amines (aryl amines): B -> the amines are not nucleophilic enough to directly add to the carbonyl, and general-acid catalysis is found for this step. The amines should be in its free base form, and therefore the rate still increases with increasing pH. At higher pHs, the dehydration becomes rds (step 3), and it involves general-acid catalysis. Therefore, in this reaction both the addition and elimination steps are general-acid catalyzed, but enough free56 base form of the amine still needs to be present to produce a reasonable rate. 10.16 The addition of carbon nucleophiles, followed by elimination- the Wittig reaction
P=C or P=O can be acceptable, but the d orbitals on P are too high in energy to participate in a significant manner in the bonding to phosphorus. Thus, the zwitterion forms (ylide) are more representative of the true chemical structure.
57 10.17 Acyl transfers
10.17.1 General electron-pushing schemes
tetrahedral intermediate
58 Other possible pathways, however, the most common pathway is addition-elimination via a tetrahedral intermediate.
highly acidic conditions
59 10.17.2 Isotope scrambling
O 18 O18 O H O18 HO OH 2 + R OR' R OR' R OR' R OR'
Apparently all the carboxylic acid derivatives (esters, acyl halides, anhydrides and amides) can proceed through tetrahedral intermediates during acyl transfers.
Caution: observation of isotope exchange -> a good evidence for a tetrahedral intermediates the lack of isotope exchange -> we do not know which is correct because if nucleophilic
attack is rds (k2 >> k-1), little exchange into the starting material will be seen. Amides display such behavior under acidic conditions.
rds little exchange
60 10.17.4 Catalysis
a better nucleophile than ROH or H2O
a highly reactive carbonyl Reaction of an alcohol or water with an acid halide in the presence of trialkyl amine -> not only base neutralizes the HX, but also significantly enhances the rate of the reaction. Other species such as anhydrides and esters are also susceptible to this form of catalysis.
Amide hydrolysis under basic conditions not very effective very bad LG
rds base-initiated reaction, not base-catalyzed reaction very rapid 18O scrambling is observed.
61 Base-mediated reaction is not very effective for amide hydrolysis. Amide hydrolysis under acidic conditions effective
Since amides are so unreactive toward nucleophilic attack, specific-acid catalysis is most commonly observed. Little to no 18O scrambling into reactants is observed, but still tetrahedral intermediate exists. acidic conditions
extremely acidic conditions
62 Ester hydrolysis under basic conditions very effective
base-initiated reaction, not base-catalyzed reaction
- - k2 ~ k-1 (the rate of departure of OH ~ the rate of departure of OR) However, a good LG departs much faster.
Ester hydrolysis under acidic conditions very effective
An addition-elimination process
63 Serine proteases: the catalytic triad eg) chymotrypsin
Catalytic triad
64 Metalloproteases: Zn(II) catalysis eg) carboxypeptidase A
65 Peptide synthesis
66