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Short Title: Ecological Properties of Ruminal Microbiota
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 24 December 2020 doi:10.20944/preprints202012.0628.v1 CHARACTERISTICS OF RUMINAL MICROBIAL COMMUNITY: EVOLUTIONARY AND ECOLOGICAL PERSPECTIVES AMLAN KUMAR PATRA* Department of Animal Nutrition, West Bengal University of Animal and Fishery Sciences, Belgachia, K.B. Sarani 37, Kolkata 700037, India *Corresponding author. Email address: [email protected] (A.K. Patra) Short title: Ecological properties of ruminal microbiota 0 © 2020 by the author(s). Distributed under a Creative Commons CC BY license. Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 24 December 2020 doi:10.20944/preprints202012.0628.v1 CHARACTERISTICS OF RUMINAL MICROBIAL COMMUNITY: EVOLUTIONARY AND ECOLOGICAL PERSPECTIVES Abstract Ruminants perhaps appeared about 50 million years ago (Ma). Five ruminant families had been extinct and about 200 species in 6 ruminant families are living today. The first ruminant family probably was small omnivore without functional ruminal microbiota to digest fiber. Subsequently, other ruminant families evolved around 18-23 Ma along with woodlands and grasslands. Probably, ruminants started to consume selective and highly nutritious plant leaves and grasses similar to concentrates. By 5-11 Ma, grasslands expanded and some ruminants used more grass in their diets with comparatively low nutritive values and high fibers. Historically, humans have domesticated 9 ruminant species that are mostly utilizer of low quality forages for human benefits. Thus, the non-functional rumen microbiota to predominantly concentrate fermenting microbiota, followed by predominantly fiber digesting microbiota had evolved for mutual complementary benefits of holobiont over the million years. The core microbiome of ruminant species seems the resultant of hologenome interaction in an evolutionary unit. -
Michael O. Woodburne1,* Alberto L. Cione2,**, and Eduardo P. Tonni2,***
Woodburne, M.O.; Cione, A.L.; and Tonni, E.P., 2006, Central American provincialism and the 73 Great American Biotic Interchange, in Carranza-Castañeda, Óscar, and Lindsay, E.H., eds., Ad- vances in late Tertiary vertebrate paleontology in Mexico and the Great American Biotic In- terchange: Universidad Nacional Autónoma de México, Instituto de Geología and Centro de Geociencias, Publicación Especial 4, p. 73–101. CENTRAL AMERICAN PROVINCIALISM AND THE GREAT AMERICAN BIOTIC INTERCHANGE Michael O. Woodburne1,* Alberto L. Cione2,**, and Eduardo P. Tonni2,*** ABSTRACT The age and phyletic context of mammals that dispersed between North and South America during the past 9 m.y. is summarized. The presence of a Central American province of cladogenesis and faunal differentiation is explored. One apparent aspect of such a province is to delay dispersals of some taxa northward from Mexico into the continental United States, largely during the Blancan. Examples are recognized among the various xenar- thrans, and cervid artiodactyls. Whereas the concept of a Central American province has been mentioned in past investigations it is upgraded here. Paratoceras (protoceratid artio- dactyl) and rhynchotheriine proboscideans provide perhaps the most compelling examples of Central American cladogenesis (late Arikareean to early Barstovian and Hemphillian to Rancholabrean, respectively), but this category includes Hemphillian sigmodontine rodents, and perhaps a variety of carnivores and ungulates from Honduras in the medial Miocene, as well as peccaries and equids from Mexico. For South America, Mexican canids and hy- drochoerid rodents may have had an earlier development in Mexico. Remarkably, the first South American immigrants to Mexico (after the Miocene heralds; the xenarthrans Plaina and Glossotherium) apparently dispersed northward at the same time as the first Holarctic taxa dispersed to South America (sigmodontine rodents and the tayassuid artiodactyls). -
Chromosome Polymorphism in the Brazilian Dwarf Brocket Deer, Mazama Nana (Mammalia, Cervidae)
Genetics and Molecular Biology, 31, 1, 53-57 (2008) Copyright by the Brazilian Society of Genetics. Printed in Brazil www.sbg.org.br Research Article Chromosome polymorphism in the Brazilian dwarf brocket deer, Mazama nana (Mammalia, Cervidae) Vanessa Veltrini Abril1,2 and José Maurício Barbanti Duarte2 1Programa de Pós-Graduação em Genética e Melhoramento Animal, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Campus de Jaboticabal, Jaboticabal, SP, Brazil. 2Núcleo de Pesquisa e Conservação de Cervídeos, Departamento de Zootecnia, Faculdade de Ciências Agrárias e Veterinárias, Universidade Estadual Paulista, Campus de Jaboticabal, Jaboticabal, SP, Brazil. Abstract The Brazilian dwarf brocket deer (Mazama nana) is the smallest deer species in Brazil and is considered threatened due to the reduction and alteration of its habitat, the Atlantic Rainforest. Moreover, previous work suggested the pres- ence of intraspecific chromosome polymorphisms which may contribute to further population instability because of the reduced fertility arising from the deleterious effects of chromosome rearrangements during meiosis. We used G- and C-banding, and nucleolus organizer regions localization by silver-nitrate staining (Ag-NOR) to investigate the causes of this variation. Mazama nana exhibited eight different karyotypes (2n = 36 through 39 and FN = 58) result- ing from centric fusions and from inter and intraindividual variation in the number of B chromosomes (one to six). Most of the animals were heterozygous for a single fusion, suggesting one or several of the following: a) genetic in- stability in a species that has not reached its optimal karyotypic evolutionary state yet; b) negative selective pressure acting on accumulated rearrangements; and c) probable positive selection pressure for heterozygous individuals which maintains the polymorphism in the population (in contrast with the negative selection for many rearrangements within a single individual). -
Reproductive Seasonality in Captive Wild Ruminants: Implications for Biogeographical Adaptation, Photoperiodic Control, and Life History
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2012 Reproductive seasonality in captive wild ruminants: implications for biogeographical adaptation, photoperiodic control, and life history Zerbe, Philipp Abstract: Zur quantitativen Beschreibung der Reproduktionsmuster wurden Daten von 110 Wildwiederkäuer- arten aus Zoos der gemässigten Zone verwendet (dabei wurde die Anzahl Tage, an denen 80% aller Geburten stattfanden, als Geburtenpeak-Breite [BPB] definiert). Diese Muster wurden mit verschiede- nen biologischen Charakteristika verknüpft und mit denen von freilebenden Tieren verglichen. Der Bre- itengrad des natürlichen Verbreitungsgebietes korreliert stark mit dem in Menschenobhut beobachteten BPB. Nur 11% der Spezies wechselten ihr reproduktives Muster zwischen Wildnis und Gefangenschaft, wobei für saisonale Spezies die errechnete Tageslichtlänge zum Zeitpunkt der Konzeption für freilebende und in Menschenobhut gehaltene Populationen gleich war. Reproduktive Saisonalität erklärt zusätzliche Varianzen im Verhältnis von Körpergewicht und Tragzeit, wobei saisonalere Spezies für ihr Körpergewicht eine kürzere Tragzeit aufweisen. Rückschliessend ist festzuhalten, dass Photoperiodik, speziell die abso- lute Tageslichtlänge, genetisch fixierter Auslöser für die Fortpflanzung ist, und dass die Plastizität der Tragzeit unterstützend auf die erfolgreiche Verbreitung der Wiederkäuer in höheren Breitengraden wirkte. A dataset on 110 wild ruminant species kept in captivity in temperate-zone zoos was used to describe their reproductive patterns quantitatively (determining the birth peak breadth BPB as the number of days in which 80% of all births occur); then this pattern was linked to various biological characteristics, and compared with free-ranging animals. Globally, latitude of natural origin highly correlates with BPB observed in captivity, with species being more seasonal originating from higher latitudes. -
Identification of the Endangered Small Red Brocket Deer (Mazama Bororo) Using Noninvasive Genetic Techniques (Mammalia; Cervidae)
Molecular Ecology Resources (2009) 9, 754-758 doi:10.1111/j.l755-0998.2008.02390.x MOLECULAR DIAGNOSTICS AND DNA TAXONOMY Identification of the endangered small red brocket deer (Mazama bororo) using noninvasive genetic techniques (Mammalia; Cervidae) SUSANA GONZALEZ,* JESUS E. MALDONADO/r JORGE ORTEGA/tJ: ANGELA CRISTINA TALARICO,§LETICIABIDEGARAY-BATISTA,*,**JOSE EDUARDO GARCIA! and JOSE MAURICIO BARBANTI DUARTEg *Unidad de Genetica de la Conservation, Departamento de Genetica, IIBCE-Facultad de Ciencias/UdelaR, Montevideo, Uruguay, tCenterfor Conservation and Evolutionary Genetics, NZP/NMNH, Smithsonian Institution, 3001 Connecticut Ave. NW, Washington D.C. 20008, USA, %Laboratorio de Ictiologia y Limnologia, Posgrado en Ciencias Quimico-Biologicas, Escuela National de Ciencias Biologicas, lnstituto Politecnico National, Prolongation de Carpio y Plan de Ayala s/n, Col. Santo Tomds, 11340 Mexico, %Nucleo de Pesauisa e Conservacao de Cervideos (NUPECCE), Departamento de Zootecnia, FCAV/UNESP, Sao Paulo State University, Via de Acesso Paulo Donato Castellane, s/n, CEP 14884-900, Jaboticabal-SP, Brazil, fCentro Academico de Vitoria. Universidade Federal de Pernambuco, 55608-680 Vitoria de Santo Antao — PE, Brazil Abstract The small red brocket deer Mazama bororo is one of the most endangered deer in the Neotropics. The great morphological similarities with three other sympatric brocket deer species, coupled with the fact that they inhabit densely forested habitats complicate detection and prevent the use of traditional methodologies for accurate identification of species. The ability to determine the presence of this endangered species in an area is crucial for estimating its distribution range, and is critical for establishing conservation management strategies. Here we describe a fast and reliable noninvasive genetic method for species identification of Mazama species from faeces. -
45765132012.Pdf
Mastozoología Neotropical ISSN: 0327-9383 ISSN: 1666-0536 [email protected] Sociedad Argentina para el Estudio de los Mamíferos Argentina González, Susana; Barbanti Duarte, José Maurício SPECIATION, EVOLUTIONARY HISTORY AND CONSERVATION TRENDS OF NEOTROPICAL DEER Mastozoología Neotropical, vol. 27, núm. 0, 2020, -Julio, pp. 37-47 Sociedad Argentina para el Estudio de los Mamíferos Tucumán, Argentina Disponible en: https://www.redalyc.org/articulo.oa?id=45765132012 Cómo citar el artículo Número completo Sistema de Información Científica Redalyc Más información del artículo Red de Revistas Científicas de América Latina y el Caribe, España y Portugal Página de la revista en redalyc.org Proyecto académico sin fines de lucro, desarrollado bajo la iniciativa de acceso abierto Mastozoología Neotropical, 27(SI):37-47, Mendoza, 2020 Copyright ©SAREM, 2020 Versión on-line ISSN 1666-0536 http://www.sarem.org.ar https://doi.org/10.31687/saremMN_SI.20.27.1.05 https://sbmz.org Número Aniversario SPECIATION, EVOLUTIONARY HISTORY AND CONSERVATION TRENDS OF NEOTROPICAL DEER Susana González1 and José Maurício Barbanti Duarte2 1 Biodiversidad y Genética, Instituto de Investigaciones Biológicas Clemente Estable-Ministerio de Educación y Cultura, Montevideo, Uruguay. [Correspondence: Susana González <[email protected]>] 2 Núcleo de Pesquisa e Conservação de Cervídeos (NUPECCE), Departamento de Zootecnia, Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP), Jaboticabal-SP, Brasil. ABSTRACT. Neotropical deer species have broad geographic ranges in vulnerable Latin American ecosystems. Habitat destruction and overhunting have limited deer species to a portion of their historical ranges. Our aims are to provide an overview of the current state of knowledge of Neotropical deer species systematics and evo- lutionary history, and to discuss their current conservation status. -
Activity Pattern of Brocket Deer (Genus Mazama) in the Atlantic Forest: Does Sampling Design Affect the Patterns?
Research Article JOJ Wildl Biodivers Copyright © All rights are reserved by Ana Carolina Srbek-Araujo Volume 1 Issue 2 - September 2019 Activity Pattern of Brocket Deer (Genus Mazama) in the Atlantic Forest: Does Sampling Design Affect the Patterns? Ana Carolina Srbek-Araujo1,2,3,4*, Tayná Seabra1 and Giovanna Colnago Cecanecchia1,2 1Laboratório de Ecologia e Conservação de Biodiversidade (LECBio), Universidade Vila Velha – UVV, Rua Comissário José Dantas de Melo, nº 21, Bairro Boa Vista, Vila Velha, Espírito Santo, Brazil 2Programa de Pós-graduação em Ecologia de Ecossistemas, Universidade Vila Velha – UVV, Brazil 3Programa de Pós-graduação em Ciência Animal, Universidade Vila Velha – UVV, Brazil 4Instituto SerraDiCal de Pesquisa e Conservação, Belo Horizonte, Minas Gerais, Brazil Submission: June 25, 2019; Published: September 19, 2019 *Corresponding author: Ana Carolina Srbek-Araujo, Laboratório de Ecologia e Conservação de Biodiversidade, Programa de Pós-graduação em Ecologia de Ecossistemas, Programa de Pós-graduação em Ciência Animal, Universidade Vila Velha, Vila Velha, Espírito Santo, Brazil Abstract This study aimed to describe the activity pattern of Mazama spp. in an Atlantic Forest remnant in southeastern Brazil, and to test whether sampling designs, and these included camera trapping installed along internal unpaved roads or in the forest interior. The records of Mazama spp. werethe sampling collected design throughout can affect the theday, recorded with no periods patterns. of Datainactivity, from 4similarly sampling to -
Gross Anatomy of the Gastrointestinal Tract of a Red Brocket Deer (Mazama Americana): a Case Study
Journal of Advanced Veterinary Research Volume 8, Issue 3 (2018) 26-31 Journal of Advanced Veterinary Research http://advetresearch.com/index.php/avr/index Gross Anatomy of the Gastrointestinal Tract of a Red Brocket Deer (Mazama americana): A Case Study Kegan Romelle Jones*, Kavita Ranjeeta Lall, Gary Wayne Garcia The Open Tropical Forage-Animal Production Laboratory [OTF-APL], Department of Food Production [DFP], Faculty of Food and Agriculture [FFA], The University of the West Indies [UWI], St Augustine, Trinidad and Tobago ARTICLE INFO ABSTRACT Case Report A fresh carcass of a male red brocket deer (Mazama americana) was examined and dissected to macro- scopically and morphometrically examine its gastrointestinal tract. It was found to have the typical Received: rumen forestomach, consisting of the rumen, reticulum, omasum and abomasum. The tongue of the 17 May 2018 red brocket deer is pointed with a prominent torus lingua. The small intestine (4.743 m) was almost twice the length of the colon and rectum (1.940 m) and made up 65.84% of the intestinal tract, while Accepted the large intestine accounted for 35.16%. The hard palate had transverse folds which ran to the level of : the premolars, leading feed into the oesophagus. These preliminary findings classified the red brocket 29 June 2018 deer as a concentrate selector ruminant. This was the first known anatomical description of the gas- trointestinal tract of the red brocket deer (Mazama americana) documented. Keywords: Red brocket deer, Anatomy, Digestive tract, Measurements, Forestomach,Intestine J. Adv. Vet. Res. (2018), 8 (3),26-31 Introduction Bodmer, 1989; Emmons and Freer, 1990; Bodmer, 1991b; Eisenberg and Redford, 1999). -
Gallina & Mandujano
Mongabay.com Open Access Journal - Tropical Conservation Science Vol. 2 (2):116-127, 2009 Special issue: introduction Research on ecology, conservation and management of wild ungulates in Mexico Sonia Gallina1 and Salvador Mandujano1 1 Departamento de Biodiversidad y Ecología Animal, Instituto de Ecología A. C., km. 2.5 Carret. Ant. Coatepec No. 351, Congregación del Haya, Xalapa 91070, Ver. México. E‐mail: <[email protected]>; <[email protected]> Abstract This special issue of Tropical Conservation Science provides a synopsis of nine of the eleven presentations on ungulates presented at the Symposium on Ecology and Conservation of Ungulates in Mexico during the Mexican Congress of Ecology held in November 2008 in Merida, Yucatan. Of the eleven species of wild ungulates in Mexico (Baird´s tapir Tapirus bairdii, pronghorn antelope Antilocapra americana, American bison Bison bison, bighorn sheep Ovis canadensis, elk Cervus canadensis, red brocket deer Mazama temama, Yucatan brown brocket Mazama pandora, mule deer Odocoileus hemionus, white-tailed deer Odocoileus virginianus, white-lipped peccary Tayassu pecari and collared peccary Pecari tajacu), studies which concern four of these species are presented: Baird’s tapir and the white lipped peccary, which are tropical species in danger of extinction; the bighorn sheep, of high value for hunting in the north-west; and the white-tailed deer, the most studied ungulate in Mexico due to its wide distribution in the country and high hunting and cultural value. In addition, two studies of exotic species, wild boar (Sus scrofa) and red deer (Cervus elaphus), are presented. Issues addressed in these studies are: population estimates, habitat use, evaluation of UMA (Spanish acronym for ‘Wildlife Conservation, Management and Sustainable Utilization Units’) and ANP (Spanish acronym for ‘Natural Protected Areas’) to sustain minimum viable populations, and the effect of alien species in protected areas and UMA, all of which allow an insight into ungulate conservation and management within the country. -
Sexual Selection and Extinction in Deer Saloume Bazyan
Sexual selection and extinction in deer Saloume Bazyan Degree project in biology, Master of science (2 years), 2013 Examensarbete i biologi 30 hp till masterexamen, 2013 Biology Education Centre and Ecology and Genetics, Uppsala University Supervisor: Jacob Höglund External opponent: Masahito Tsuboi Content Abstract..............................................................................................................................................II Introduction..........................................................................................................................................1 Sexual selection........................................................................................................................1 − Male-male competition...................................................................................................2 − Female choice.................................................................................................................2 − Sexual conflict.................................................................................................................3 Secondary sexual trait and mating system. .............................................................................3 Intensity of sexual selection......................................................................................................5 Goal and scope.....................................................................................................................................6 Methods................................................................................................................................................8 -
Human Impacts on Carnivore Biodiversity Inside and Outside
HUMAN IMPACTS ON CARNIVORE BIODIVERSITY INSIDE AND OUTSIDE PROTECTED AREAS IN TANZANIA MAURUS JANUARY MSUHA PhD THESIS UNIVERSITY COLLEGE LONDON (UCL) AND INSTITUTE OF ZOOLOGY, ZOOLOGICAL SOCIETY OF LONDON 2009 1 DECLARATION I, Maurus January Msuha hereby declare that the work presented in this thesis is my own. Where information has been derived from other sources, I confirm that this has been indicated. The material contained in this thesis has not been previously submitted for a degree at University College London or any other university. ©The copyright of this thesis rests with the author. No quotation of this thesis should be published without the author’s prior written consent and information derived from this should be acknowledged. Thesis submitted in fulfilment of the requirements for the Degree of Doctor of Philosophy, University College London, 2009 SUMMARY 2 Conservation of biodiversity throughout the world is often characterized by the establishment of protected areas. The implementation of this approach is extremely challenging particularly in developing countries due to expanding human population and demand for resources. Yet, information that is needed to guide managers and policy makers to develop effective conservation strategies is scarce in most of these countries. This thesis aimed to explore the impact of human activities on carnivore biodiversity inside and outside Tarangire National Park in Tanzania using camera traps, and to assess attitudes of agropastoralists towards carnivores using interviews. Results showed no significant difference in carnivore species richness between the park and communal grazing areas outside the park, but was a significantly different between the park and cultivated areas outside it. -
Mammals and Stratigraphy : Geochronology of the Continental Mammal·Bearing Quaternary of South America
MAMMALS AND STRATIGRAPHY : GEOCHRONOLOGY OF THE CONTINENTAL MAMMAL·BEARING QUATERNARY OF SOUTH AMERICA by Larry G. MARSHALLI, Annallsa BERTA'; Robert HOFFSTETTER', Rosendo PASCUAL', Osvaldo A. REIG', Miguel BOMBIN', Alvaro MONES' CONTENTS p.go Abstract, Resume, Resumen ................................................... 2, 3 Introduction .................................................................. 4 Acknowledgments ............................................................. 6 South American Pleistocene Land Mammal Ages ....... .. 6 Time, rock, and faunal units ...................... .. 6 Faunas....................................................................... 9 Zoological character and history ................... .. 9 Pliocene-Pleistocene boundary ................................................ 12 Argentina .................................................................... 13 Pampean .................................................................. 13 Uquian (Uquiense and Puelchense) .......................................... 23 Ensenadan (Ensenadense or Pampeano Inferior) ............................... 28 Lujanian (LuJanense or Pampeano lacus/re) .................................. 29 Post Pampean (Holocene) ........... :....................................... 30 Bolivia ................ '...................................................... ~. 31 Brazil ........................................................................ 37 Chile ........................................................................ 44 Colombia