Ecology and Evolutionary Biology
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Jaltomata I: Circumscription, Description, and New Combinations for Five South American Species (Solaneae, Solanaceae)
Jaltomata I: circumscription, description, and new combinations for five South American species (Solaneae, Solanaceae) THOMASMI ONE,GREGORY' J. ANDERSON, AN D MICHAELN EE Mione, Thomas, Gregory J. Anderson (Ecology and Evolutionary Biology, Uni- versity of Connecticut, Storrs, CT 06269, U.S.A.), and Michael Nee (The New York Botanical Garden, Bronx, New York 10458-5126, U.S.A.). Jaltomata I: circumscription, description, and new combinations for five South American spe- cies (Solaneae, Solanaceae). Brittonia 45: 138-145. 1993.-The genus Jaltomata (including Hebecladus) is described. Five Hebecladus species are transferred to Jaltomata. Jaltomata viridiflora is widespread, from western Venezuela through Ecuador; J. bicolor and J. propinqua occur in central Peru; J. umbellata of the Loma Formation of the Department Lima, Peru is rare; J. ventricosa is known only from the vicinity of La Libertad, Otuzco, Peru. All are montane except for J. umbellata. Included are short descriptions and illustrations. El gCnero Jaltomata (incluyendo Hebecladus) se describe en este trabajo. Cinco especies de Hebecladus son transferidas a Jaltomata. Jaltomata viridiflora esti difundida extensamente en 10s Andes desde el oeste de Venezuela hasta el Ecuador; J. bicolor y J. propinqua se encuentran en la region central del Perfi; J. umbellata de la Formaci6n Loma de Departamento Lima, Perfi, es rara; J. ventricosa es conocida solamente en la vecindad de La Libertad, Otuzco, Perk Las especies tratadas son de montaiia, exceptuando J. umbellata. Se incluyen descripciones cortas e ilustraciones. Key words: Andean flora, Hebecladus, Jaltomata, Solanaceae, Solaneae, Solanoi- deae. Prior to this study it was virtually im- were used for taxonomy, comparative mor- possible to identify species of South Amer- phology, and chloroplast DNA restriction ican Jaltomata because nearly all basio- site-based phylogeny construction. -
BGBM Annual Report 2017–2019
NETWORKING FOR DIVERSITY Annual Report 2017 – 2019 2017 – BGBM BGBM Annual Report 2017 – 2019 Cover image: Research into global biodiversity and its significance for humanity is impossible without networks. The topic of networking can be understood in different ways: in the natural world, with the life processes within an organism – visible in the network of the veins of a leaf or in the genetic diversity in populations of plants – networking takes place by means of pollen, via pollinators or the wind. In the world of research, individual objects, such as a particular plant, are networked with the data obtained from them. Networking is also crucial if this data is to be effective as a knowledge base for solving global issues of the future: collaboration between scientific experts within and across disciplines and with stakeholders at regional, national and international level. Contents Foreword 5 Organisation 56 A network for plants 6 Facts and figures 57 Staff, visiting scientists, doctoral students 57 Key events of 2017 – 2019 10 Affiliated and unsalaried scientists, volunteers 58 BGBM publications 59 When diversity goes online 16 Species newly described by BGBM authors 78 Families and genera newly described by BGBM authors 82 On the quest for diversity 20 Online resources and databases 83 Externally funded projects 87 Invisible diversity 24 Hosted scientific events 2017 – 2019 92 Collections 93 Humboldt 2.0 30 Library 96 BGBM Press: publications 97 Between East and West 36 Botanical Museum 99 Press and public relations 101 At the service of science 40 Visitor numbers 102 Budget 103 A research museum 44 Publication information 104 Hands-on science 50 Our symbol, the corncockle 52 4 5 Foreword BGBM Annual Report 2017 – 2019 We are facing vital challenges. -
A Phylogenetic Framework for Evolutionary Study of the Nightshades
Särkinen et al. BMC Evolutionary Biology 2013, 13:214 http://www.biomedcentral.com/1471-2148/13/214 RESEARCH ARTICLE Open Access A phylogenetic framework for evolutionary study of the nightshades (Solanaceae): a dated 1000-tip tree Tiina Särkinen1,2*, Lynn Bohs3, Richard G Olmstead4 and Sandra Knapp1 Abstract Background: The Solanaceae is a plant family of great economic importance. Despite a wealth of phylogenetic work on individual clades and a deep knowledge of particular cultivated species such as tomato and potato, a robust evolutionary framework with a dated molecular phylogeny for the family is still lacking. Here we investigate molecular divergence times for Solanaceae using a densely-sampled species-level phylogeny. We also review the fossil record of the family to derive robust calibration points, and estimate a chronogram using an uncorrelated relaxed molecular clock. Results: Our densely-sampled phylogeny shows strong support for all previously identified clades of Solanaceae and strongly supported relationships between the major clades, particularly within Solanum. The Tomato clade is shown to be sister to section Petota, and the Regmandra clade is the first branching member of the Potato clade. The minimum age estimates for major splits within the family provided here correspond well with results from previous studies, indicating splits between tomato & potato around 8 Million years ago (Ma) with a 95% highest posterior density (HPD) 7–10 Ma, Solanum & Capsicum c. 19 Ma (95% HPD 17–21), and Solanum & Nicotiana c. 24 Ma (95% HPD 23–26). Conclusions: Our large time-calibrated phylogeny provides a significant step towards completing a fully sampled species-level phylogeny for Solanaceae, and provides age estimates for the whole family. -
A New Cicadetta Species in the Montana Complex (Insecta, Hemiptera, Cicadidae)
Zootaxa 1442: 55–68 (2007) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2007 · Magnolia Press ISSN 1175-5334 (online edition) Similar look but different song: a new Cicadetta species in the montana complex (Insecta, Hemiptera, Cicadidae) JÉRÔME SUEUR1 & STÉPHANE PUISSANT2 1NAMC-CNRS UMR 8620, Université Paris XI, Bât. 446, 91405 Orsay Cedex, France Present address: Institut de Recherche sur la Biologie de l’Insecte - UMR CNRS 6035, Parc Grandmont, 37200 Tours, France. E-mail: [email protected] 2Muséum national d'Histoire naturelle (Paris), Département Systématique et Evolution, Entomologie, 4 square Saint-Marsal, F-66100 Perpignan, France 1Corresponding author Abstract The Cicadetta montana species complex includes six cicada species from the West-Palaearctic region. Based on acoustic diagnostic characters, a seventh species Cicadetta cantilatrix sp. nov. belonging to the complex is described. The type- locality is in France but the species distribution area extends to Poland, Germany, Switzerland, Austria, Slovenia, Mace- donia and Montenegro. The calling song sequence consists of two phrases with different echemes. This calling pattern clearly differs from those produced by all other members of the complex, including C. cerdaniensis, previously mistaken with the new species. This description increases the acoustic diversity observed within a single cicada genus and sup- ports the hypothesis that sound communication may play a central role in speciation. Key words: Cryptic species, bioacoustics, Cicadidae, Cicadetta, geographic distribution, France Introduction Some biodiversity is not obvious when looking at preserved specimens. Various species do not differ in their morphology, but drastically in their behaviour. Such sibling, or cryptic, species are particularly evident in insects that produce sound to communicate: they look similar but sing differently. -
County Genus Species Species Author Common
County Genus Species Species Author Common Name Tribe Subfamily Family Superfamily Muscatine County Abagrotis alternata (Grote, 1864) Greater Red Dart Noctuini Noctuinae Noctuidae Noctuoidea Muscatine County Abrostola urentis Guenee, 1852 Variegated Brindle Moth Abrostolini Plusiinae Noctuidae Noctuoidea Muscatine County Acleris simpliciana (Walsingham, 1879) Tortricini Tortricinae Tortricidae Tortricoidea Muscatine County Acrolophus morus (Grote, 1881) None (None) (None) Acrolophidae Tineoidea Muscatine County Acrolophus plumifrontella (Clemens, 1859) None (None) (None) Acrolophidae Tineoidea Muscatine County Acrolophus popeanella (Clemens, 1859) None (None) (None) Acrolophidae Tineoidea Muscatine County Acronicta afflicta Grote, 1864 Afflicted Dagger Moth (None) Acronictinae Noctuidae Noctuoidea Muscatine County Acronicta clarescens Guenee, 1852 Clear Dagger Moth (None) Acronictinae Noctuidae Noctuoidea Muscatine County Acronicta exilis Grote, 1874 Exiled Dagger Moth (None) Acronictinae Noctuidae Noctuoidea Muscatine County Acronicta funeralis Grote and Robinson, 1866 Funerary Dagger Moth (None) Acronictinae Noctuidae Noctuoidea Muscatine County Acronicta haesitata (Grote, 1882) Hesitant Dagger Moth (None) Acronictinae Noctuidae Noctuoidea Muscatine County Acronicta hasta Guenee, 1852 Speared Dagger Moth (None) Acronictinae Noctuidae Noctuoidea Muscatine County Acronicta inclara J E Smith, 1900 Unclear Dagger Moth (None) Acronictinae Noctuidae Noctuoidea Muscatine County Acronicta increta Morrison, 1974 Raspberry Bud Dagger Moth (None) -
IAPT/IOPB Chromosome Data 25 TAXON 66 (5) • October 2017: 1246–1252
Marhold & Kučera (eds.) • IAPT/IOPB chromosome data 25 TAXON 66 (5) • October 2017: 1246–1252 IOPB COLUMN Edited by Karol Marhold & Ilse Breitwieser IAPT/IOPB chromosome data 25 Edited by Karol Marhold & Jaromír Kučera DOI https://doi.org/10.12705/665.29 Tatyana V. An’kova* & Elena Yu. Zykova Franco E. Chiarini,1* David Lipari,1 Gloria E. Barboza1 & Sandra Knapp2 Central Siberian Botanical Garden SB RAS, Zolotodolinskaya Str. 101, 630090 Novosibirsk, Russia 1 Instituto Multidisciplinario de Biología Vegetal (IMBIV), * Author for correspondence: [email protected] CONICET, Universidad Nacional de Córdoba, CC 495 Córdoba 5000, Argentina All materials CHN; vouchers are deposited in NS; collector E.Yu. 2 Department of Life Sciences, Natural History Museum, Zykova. Cromwell Road, London SW7 5BD, U.K. * Author for correspondence: [email protected] The study was supported by the Russian Foundation for Basic Research (grant 16-04-01246 A to E. Zykova). All materials CHN; collectors: FC = Franco Chiarini, GB = Gloria Barboza, JU = Juan Urdampilleta, SK = Sandra Knapp, TS ASTERACEAE = Tiina Särkinen. Anthemis tinctoria L., 2n = 18; Russia, Altay Republic, Z35a, Z37. 2n = 27; Russia, Altay Republic, Z35b. The authors thank Consejo Nacional de Investigaciones Científi- Arctium lappa L., 2n = 36; Russia, Altay Republic, Z38. cas y Técnicas (CONICET, Argentina) for financial support. NSF Plan- Arctium minus (Hill) Bernh., 2n = 36; Russia, Altay Republic, Z41; etary Biodiversity Initiative DEB-0316614 “PBI Solanum: a worldwide Russia, Novosibirskaya Oblast, Z43. treatment”; field work for SK was financed by a National Geographic Senecio vulgaris L., 2n = 40; Russia, Altay Republic, Z56, Z90; Rus- grant to T. -
Biodiversity News Via Email, Or Know of Somebody Who Would, Please Contact Us at [email protected] Summer in This Issue
Biodiversity News Issue 61 Summer Edition Contents - News - Features - Local & Regional - Publications - Events If you would like to receive Biodiversity News via email, or know of somebody who would, please contact us at [email protected] Summer In this issue Editorial 3 Local & Regional Swift Conservation Lifts Off in 20 News Perthshire Saving Hertfordshire‟s dying rivers 21 State of Natural Capital Report 4 – a catchment-based approach Woodland Trust‟s urgent call for 5 Creating a haven for wildlife in West 23 new citizen science recorders Glamorgan Local Nature Partnerships – 1 year 6 on Wildlife boost could help NW 25 Historic result for woodland in 8 economy Northern Ireland First Glencoe sighting for 26 Chequered Skipper Features Bluebells arrive at last 27 Researching Bechstein‟s Bat at 9 Grafton Wood Wales plans a brighter future for 28 Natura 2000 The Natural Talent Apprenticeship 10 scheme Conservation grazing at Marden 11 Publications Park Marine Biodiversity & Ecosystem 30 Where on Earth do British House 13 Functioning Martins go? Updates on implementation of the 31 Large Heath Biodiversity Campaign 14 Natural Environment White Paper British scientists are first to identify 15 Wood Wise: invasive species 31 record-breaking migration flights management in woodland habitats „Cicada Hunt‟ lands on the app 16 markets Events Recent launch of Bee policy review 18 Communicate 2013: Stories for 32 Change Do your bit for the moors 32 Local & Regional Cutting-edge heathland 19 conservation Please note that the views expressed in Biodiversity News are the views of the contributors and do not necessarily reflect the views of the UK Biodiversity Partnership or the organisations they represent. -
(Entomophthorales), Obligate Pathogens of Cicadas Angie M
MYCOLOGIA https://doi.org/10.1080/00275514.2020.1742033 Evolutionary relationships among Massospora spp. (Entomophthorales), obligate pathogens of cicadas Angie M. Macias a, David M. Geiserb, Jason E. Stajich c, Piotr Łukasik d,e, Claudio Velosof, DeAnna C. Bublitz e, Matthew C. Bergera, Greg R. Boycea, Kathie Hodgeg, and Matt T. Kasson a aDivision of Plant and Soil Sciences, West Virginia University, Morgantown, West Virginia 26506; bDepartment of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, Pennsylvania 16802; cDepartment of Microbiology and Plant Pathology and Institute for Integrative Genome Biology, University of California, Riverside, California 92521; dInstitute of Environmental Sciences, Jagiellonian University, 30-387 Kraków, Poland; eDivision of Biological Sciences, University of Montana, Missoula, Montana 59812; fDepartment of Ecological Sciences, Science Faculty, University of Chile, Santiago, Chile; gPlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York 14853 ABSTRACT ARTICLE HISTORY The fungal genus Massospora (Zoopagomycota: Entomophthorales) includes more than a dozen Received 18 October 2019 obligate, sexually transmissible pathogenic species that infect cicadas (Hemiptera) worldwide. At Accepted 10 March 2020 least two species are known to produce psychoactive compounds during infection, which has KEYWORDS garnered considerable interest for this enigmatic genus. As with many Entomophthorales, the Diceroprocta; evolutionary relationships and host associations of Massospora spp. are not well understood. The Entomopathogen; acquisition of M. diceroproctae from Arizona, M. tettigatis from Chile, and M. platypediae from Entomophthoraceae; California and Colorado provided an opportunity to conduct molecular phylogenetic analyses and invertebrate pathology; morphological studies to investigate whether these fungi represent a monophyletic group and Magicicada; Okanagana; delimit species boundaries. -
Supporting Information
Supporting Information Campbell et al. 10.1073/pnas.1421386112 SI Materials and Methods transformed into Escherichia coli JM109 High Efficiency Com- Genome Sequencing. The following amount of data were generated petent Cells. Transformed cells were grown in 3 mL of LB broth at for each sequencing technology: 136,081,956 pairs of 100 × 2 37 °C overnight, and plasmids were purified with E.Z.N.A. plas- short insert Illumina HiSeq reads for about 27 Gb total; 50,884,070 mid DNA mini kit I. The purified plasmids were used as PCR pairs of 100 × 2 large insert HiSeq reads for about 10 Gb total; templates to for further amplification of the probe region. The and 259,593 reads averaging 1600 nt for about 421 Mb total of amplified probes were subject to nick translation (>175 ng/μL PacBio data. DNA, 1× nick-translation buffer, 0.25 mM unlabeled dNTPs, 50 μM labeled dNTPs, 2.3 U/μL DNA polymerase I, 9 mU/μL Genome Annotation. Annotation of Hodgkinia DNA was done Dnase), using either Cy3 (MAGTRE006 and MAGTRE005), or using the phmmer module of HMMER v3.1b1 (1). All ORFs Cy5 (MAGTRE001 and MAGTRE012), and size selected for beginning with a start codon that overlapped a phmmer hit sizes in the range of 100–500 bp using Ampure XP beads. Probes were searched against a database of all Hodgkinia genes using with at least seven incorporated labeled dNTPs per 1,000 nucle- BLASTX 2.2.28+. MAGTRE Hodgkinia genes were considered otides as determined by spectroscopy were used for hybridization. -
Dal Forno 1 Botanical Research Institute of Texas 1700 University Drive Fort Worth, TX 76107-3400 Phone: +1 (817) 546-1959 Emai
MANUELA DAL FORNO CURRICULUM VITAE Botanical Research Institute of Texas Email: [email protected] 1700 University Drive Website: www.manueladalforno.com Fort Worth, TX 76107-3400 Twitter: @manudalforno #WeAreAllLichens Phone: +1 (817) 546-1959 Phone: +1 (703) 298-3220 EDUCATION 2015 Ph.D., Environmental Science and Public Policy George Mason University (GMU). Fairfax, VA, USA 2009 M.Sc., Botany Universidade Federal do Paraná (UFPR). Curitiba, PR, Brazil 2006 B.Sc., Biology Universidade de Santa Cruz do Sul (UNISC). Santa Cruz do Sul, RS, Brazil PROFESSIONAL APPOINTMENTS Current Research Botanist Botanical Research Institute of Texas Research Associate National Museum of Natural History (NMNH), Smithsonian Institution 2018–2019 Peter Buck Postdoctoral Research Fellow – Department of Botany National Museum of Natural History, Smithsonian Institution Research Associate Botanical Research Institute of Texas Affiliate Faculty, Department of Biology George Mason University 2016–2018 National Science Foundation Postdoctoral Research Fellow NSF PRFB 1609022: Using museum specimens to explore the diversity and variation of lichen microbiomes in space and time Smithsonian Institution (NMNH) – University of Graz, Austria 2015–2016 Laboratory Technician Center for Conservation Genomics, Smithsonian Institution 2015–2016 Herbarium Assistant Ted R. Bradley Herbarium, George Mason University PUBLICATIONS PEER REVIEWED 21. Dal Forno M, Kaminsky L, Rosentreter R, McMullin T, Aptroot A, Lücking R. 2019. A first phylogenetic assessment of Dictyonema s.lat. in southeastern North America reveals three new basidiolichens, described in honor of James D. Lawrey. Plant & Fungal Systematics 64 (2): 383–392. 20. Dal Forno M, Moncada B, Lücking R. 2018. Sticta aongstroemii, a newly recognized species in the S. damicornis morphodeme (Lobariaceae) potentially endemic to the Atlantic Forest in Brazil. -
One Hundred New Species of Lichenized Fungi: a Signature of Undiscovered Global Diversity
Phytotaxa 18: 1–127 (2011) ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Monograph PHYTOTAXA Copyright © 2011 Magnolia Press ISSN 1179-3163 (online edition) PHYTOTAXA 18 One hundred new species of lichenized fungi: a signature of undiscovered global diversity H. THORSTEN LUMBSCH1*, TEUVO AHTI2, SUSANNE ALTERMANN3, GUILLERMO AMO DE PAZ4, ANDRÉ APTROOT5, ULF ARUP6, ALEJANDRINA BÁRCENAS PEÑA7, PAULINA A. BAWINGAN8, MICHEL N. BENATTI9, LUISA BETANCOURT10, CURTIS R. BJÖRK11, KANSRI BOONPRAGOB12, MAARTEN BRAND13, FRANK BUNGARTZ14, MARCELA E. S. CÁCERES15, MEHTMET CANDAN16, JOSÉ LUIS CHAVES17, PHILIPPE CLERC18, RALPH COMMON19, BRIAN J. COPPINS20, ANA CRESPO4, MANUELA DAL-FORNO21, PRADEEP K. DIVAKAR4, MELIZAR V. DUYA22, JOHN A. ELIX23, ARVE ELVEBAKK24, JOHNATHON D. FANKHAUSER25, EDIT FARKAS26, LIDIA ITATÍ FERRARO27, EBERHARD FISCHER28, DAVID J. GALLOWAY29, ESTER GAYA30, MIREIA GIRALT31, TREVOR GOWARD32, MARTIN GRUBE33, JOSEF HAFELLNER33, JESÚS E. HERNÁNDEZ M.34, MARÍA DE LOS ANGELES HERRERA CAMPOS7, KLAUS KALB35, INGVAR KÄRNEFELT6, GINTARAS KANTVILAS36, DOROTHEE KILLMANN28, PAUL KIRIKA37, KERRY KNUDSEN38, HARALD KOMPOSCH39, SERGEY KONDRATYUK40, JAMES D. LAWREY21, ARMIN MANGOLD41, MARCELO P. MARCELLI9, BRUCE MCCUNE42, MARIA INES MESSUTI43, ANDREA MICHLIG27, RICARDO MIRANDA GONZÁLEZ7, BIBIANA MONCADA10, ALIFERETI NAIKATINI44, MATTHEW P. NELSEN1, 45, DAG O. ØVSTEDAL46, ZDENEK PALICE47, KHWANRUAN PAPONG48, SITTIPORN PARNMEN12, SERGIO PÉREZ-ORTEGA4, CHRISTIAN PRINTZEN49, VÍCTOR J. RICO4, EIMY RIVAS PLATA1, 50, JAVIER ROBAYO51, DANIA ROSABAL52, ULRIKE RUPRECHT53, NORIS SALAZAR ALLEN54, LEOPOLDO SANCHO4, LUCIANA SANTOS DE JESUS15, TAMIRES SANTOS VIEIRA15, MATTHIAS SCHULTZ55, MARK R. D. SEAWARD56, EMMANUËL SÉRUSIAUX57, IMKE SCHMITT58, HARRIE J. M. SIPMAN59, MOHAMMAD SOHRABI 2, 60, ULRIK SØCHTING61, MAJBRIT ZEUTHEN SØGAARD61, LAURENS B. SPARRIUS62, ADRIANO SPIELMANN63, TOBY SPRIBILLE33, JUTARAT SUTJARITTURAKAN64, ACHRA THAMMATHAWORN65, ARNE THELL6, GÖRAN THOR66, HOLGER THÜS67, EINAR TIMDAL68, CAMILLE TRUONG18, ROMAN TÜRK69, LOENGRIN UMAÑA TENORIO17, DALIP K. -
Diversity of Entomopathogens Fungi: Which Groups Conquered
bioRxiv preprint doi: https://doi.org/10.1101/003756; this version posted April 4, 2014. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Diversity of entomopathogens Fungi: Which groups conquered the insect body? João P. M. Araújoa & David P. Hughesb aDepartment of Biology, Penn State University, University Park, Pennsylvania, United States of America. bDepartment of Entomology and Department of Biology, Penn State University, University Park, Pennsylvania, United States of America. [email protected]; [email protected]; Abstract The entomopathogenic Fungi comprise a wide range of ecologically diverse species. This group of parasites can be found distributed among all fungal phyla and as well as among the ecologically similar but phylogenetically distinct Oomycetes or water molds, that belong to a different kingdom (Stramenopila). As a group, the entomopathogenic fungi and water molds parasitize a wide range of insect hosts from aquatic larvae in streams to adult insects of high canopy tropical forests. Their hosts are spread among 18 orders of insects, in all developmental stages such as: eggs, larvae, pupae, nymphs and adults exhibiting completely different ecologies. Such assortment of niches has resulted in these parasites evolving a considerable morphological diversity, resulting in enormous biodiversity, much of which remains unknown. Here we gather together a huge amount of records of these entomopathogens to comparing and describe both their morphologies and ecological traits. These findings highlight a wide range of adaptations that evolved following the evolutionary transition to infecting the most diverse and widespread animals on Earth, the insects.