Morphological and Molecular Characterization of Bjerkandera Adusta
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Cabalodontia (Meruliaceae), a Novel Genus for Five Fungi Previously Placed in Phlebia
Polish Botanical Journal 49(1): 1–3, 2004 CABALODONTIA (MERULIACEAE), A NOVEL GENUS FOR FIVE FUNGI PREVIOUSLY PLACED IN PHLEBIA MARCIN PIĄTEK Abstract: The new genus Cabalodontia M. Piątek with the type Odontia queletii Bourdot & Galzin is described, and new com- binations C. bresadolae (Parmasto) M. Piątek, C. cretacea (Romell ex Bourdot & Galzin) M. Piątek, C. livida (Burt) M. Piątek, C. queletii (Bourdot & Galzin) M. Piątek and C. subcretacea (Litsch.) M. Piątek are proposed. The new genus belongs to Meruliaceae P. Karst. and is closely related to Phlebia Fr. Key words: Cabalodontia, Phlebia, Steccherinum, Irpex, Meruliaceae, new genus, corticoid fungi, taxonomy Marcin Piątek, Department of Mycology, W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, 31-512 Kraków, Poland; e-mail: [email protected] The generic placement of Odontia queletii Bourdot genera should be accepted as subgenera or sections & Galzin has been much debated, and the spe- within Irpex. In addition to Flavodon, Flaviporus cies has had a very unstable taxonomic position. and Junghuhnia, Kotiranta and Saarenoksa (2002) Christiansen (1960) combined it into Phlebia Fr. as transferred to Irpex species of Steccherinum that Phlebia queletii (Bourdot & Galzin) M. P. Christ., possess a dimitic hyphal system, including Parmasto (1968) transferred the species to the genus Hydnum ochraceum Pers., the generitype of Stec- Metulodontia Parmasto as Metulodontia queletii cherinum (Maas Geesteranus 1974). Irpex is now (Bourdot & Galzin) Parmasto, and fi nally Hal- defi ned as a genus possessing a dimitic hyphal lenberg and Hjortstam (1988) reallocated Odontia system, with simple septate or clamped generative queletii to Steccherinum Gray as Steccherinum hyphae, relatively small spores, large encrusted queletii (Bourdot & Galzin) Hallenb. -
The Use of Algae and Fungi for Removal of Pharmaceuticals by Bioremediation and Biosorption Processes: a Review
Review The Use of Algae and Fungi for Removal of Pharmaceuticals by Bioremediation and Biosorption Processes: A Review Andreia Silva, Cristina Delerue-Matos, Sónia A. Figueiredo and Olga M. Freitas * REQUIMTE/LAQV, Instituto Superior de Engenharia do Porto, Rua Dr. António Bernardino de Almeida 431, 4200-072 Porto, Portugal * Correspondence: [email protected] Received: 3 July 2019; Accepted: 25 July 2019; Published: 27 July 2019 Abstract: The occurrence and fate of pharmaceuticals in the aquatic environment is recognized as one of the emerging issues in environmental chemistry. Conventional wastewater treatment plants (WWTPs) are not designed to remove pharmaceuticals (and their metabolites) from domestic wastewaters. The treatability of pharmaceutical compounds in WWTPs varies considerably depending on the type of compound since their biodegradability can differ significantly. As a consequence, they may reach the aquatic environment, directly or by leaching of the sludge produced by these facilities. Currently, the technologies under research for the removal of pharmaceuticals, namely membrane technologies and advanced oxidation processes, have high operation costs related to energy and chemical consumption. When chemical reactions are involved, other aspects to consider include the formation of harmful reaction by-products and the management of the toxic sludge produced. Research is needed in order to develop economic and sustainable treatment processes, such as bioremediation and biosorption. The use of low-cost materials, such as biological matrices (e.g., algae and fungi), has advantages such as low capital investment, easy operation, low operation costs, and the non-formation of degradation by-products. An extensive review of existing research on this subject is presented. -
Oxalic Acid Degradation by a Novel Fungal Oxalate Oxidase from Abortiporus Biennis Marcin Grąz1*, Kamila Rachwał2, Radosław Zan2 and Anna Jarosz-Wilkołazka1
Vol. 63, No 3/2016 595–600 http://dx.doi.org/10.18388/abp.2016_1282 Regular paper Oxalic acid degradation by a novel fungal oxalate oxidase from Abortiporus biennis Marcin Grąz1*, Kamila Rachwał2, Radosław Zan2 and Anna Jarosz-Wilkołazka1 1Department of Biochemistry, Maria Curie-Skłodowska University, Lublin, Poland; 2Department of Genetics and Microbiology, Maria Curie-Skłodowska University, Lublin, Poland Oxalate oxidase was identified in mycelial extracts of a to formic acid and carbon dioxide (Mäkelä et al., 2002). basidiomycete Abortiporus biennis strain. Intracellular The degradation of oxalate via action of oxalate oxidase enzyme activity was detected only after prior lowering (EC 1.2.3.4), described in our study, is atypical for fun- of the pH value of the fungal cultures by using oxalic or gi and was found predominantly in higher plants. The hydrochloric acids. This enzyme was purified using size best characterised oxalate oxidase originates from cereal exclusion chromatography (Sephadex G-25) and ion-ex- plants (Dunwell, 2000). Currently, only three oxalate oxi- change chromatography (DEAE-Sepharose). This enzyme dases of basidiomycete fungi have been described - an exhibited optimum activity at pH 2 when incubated at enzyme from Tilletia contraversa (Vaisey et al., 1961), the 40°C, and the optimum temperature was established at best characterised so far enzyme from Ceriporiopsis subver- 60°C. Among the tested organic acids, this enzyme ex- mispora (Aguilar et al., 1999), and an enzyme produced by hibited specificity only towards oxalic acid. Molecular Abortiporus biennis (Grąz et al., 2009). The enzyme from mass was calculated as 58 kDa. The values of Km for oxa- C. -
Wood Decay by Inonotus Rickii and Bjerkandera Adusta: a Micro- and Ultra-Structural Approach
IAWARobles Journal et al.35 – (1), Wood 2014: decay 51–60 51 WOOD DECAY BY INONOTUS RICKII AND BJERKANDERA ADUSTA: A MICRO- AND ULTRA-STRUCTURAL APPROACH Carolina Analía Robles1,*, María Agueda Castro2 and Silvia Edith Lopez1 1PROPLAME-PRHIDEB-CONICET & 2Laboratorio de Anatomía Vegetal Aplicada, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, PB II, 4to piso, CP 1428EHA Ciudad Autónoma de Buenos Aires, Argentina *Corresponding author; e-mail: [email protected] ABSTRACT Bjerkandera adusta (Willd.) P. Karst. and Inonotus rickii (Pat.) D.A. Reid. are important xylophagous fungi affecting street trees in Buenos Aires City, Ar- gentina. The objective of this paper is to describe the decay patterns produced by these species in London plane wood (Platanus acerifolia (Ait.) Willd.), which is one of the most abundant tree species in the city, through light microscopy (LM), scanning electron microscopy (SEM) and transmission electron microscopy (TEM). A better knowledge of the decay patterns of these fungi at early stages would provide useful information for optimizing tree management programs. Microscopic observations showed that B. adusta, having caused an important loss of dry weight, showed more extensive degradation of wood after three months than I. rickii, affecting mainly fiber walls with potential consequences in tree strength and stiffness. Inonotus rickii, on the other hand, selectively af- fected vessel walls and middle lamellae between fibers. Rays remained virtually unaltered in all decayed wood. Keywords: Wood-rotting fungi, white rot, delignification, Platanus acerifolia. INTRODUCTION White-rot fungi remove lignin, cellulose and hemicelluloses from wood. -
Hori Et Al 2013.Pdf
Mycologia, 105(6), 2013, pp. 1412–1427. DOI: 10.3852/13-072 # 2013 by The Mycological Society of America, Lawrence, KS 66044-8897 Genomewide analysis of polysaccharides degrading enzymes in 11 white- and brown-rot Polyporales provides insight into mechanisms of wood decay Chiaki Hori cellulases belonging to families GH6, GH7, GH9 Department of Biomaterials Sciences, Graduate School of and carbohydrate-binding module family CBM1 are Agricultural and Life Sciences, University of Tokyo, l-l-l, lacking in genomes of brown-rot polyporales. In Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan, and Institute for Microbial and Biochemical Technology, addition, the presence of CDH and the expansion Forest Products Laboratory, 1 Gifford Pinchot Drive, of LPMO were observed only in white-rot genomes. Madison, Wisconsin 53726 Indeed, GH6, GH7, CDH and LPMO peptides were identified only in white-rot polypores. Genes encod- Jill Gaskell ing aldose 1-epimerase (ALE), previously detected Institute for Microbial and Biochemical Technology, Forest Products Laboratory, 1 Gifford Pinchot Drive, with CDH and cellulases in the culture filtrates, also Madison, Wisconsin 53726 were identified in white-rot genomes, suggesting a physiological connection between ALE, CDH, cellu- Kiyohiko Igarashi lase and possibly LPMO. For hemicellulose degrada- Masahiro Samejima tion, genes and peptides corresponding to GH74 Department of Biomaterials Sciences, Graduate School of Agricultural and Life Sciences, University of Tokyo, l-l-l, xyloglucanase, GH10 endo-xylanase, GH79 b-glucu- Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan ronidase, CE1 acetyl xylan esterase and CE15 glucur- onoyl methylesterase were significantly increased in David Hibbett white-rot genomes compared to brown-rot genomes. -
Identification and Tracking Activity of Fungus from the Antarctic Pole on Antagonistic of Aquatic Pathogenic Bacteria
INTERNATIONAL JOURNAL OF AGRICULTURE & BIOLOGY ISSN Print: 1560–8530; ISSN Online: 1814–9596 19F–079/2019/22–6–1311–1319 DOI: 10.17957/IJAB/15.1203 http://www.fspublishers.org Full Length Article Identification and Tracking Activity of Fungus from the Antarctic Pole on Antagonistic of Aquatic Pathogenic Bacteria Chuner Cai1,2,3, Haobing Yu1, Huibin Zhao2, Xiaoyu Liu1*, Binghua Jiao1 and Bo Chen4 1Department of Biochemistry and Molecular Biology, College of Basic Medicine, Naval Medical University, Shanghai, 200433, China 2College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, 201306, China 3Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Lianyungang, Jiangsu, 222005, China 4Polar Research Institute of China, Shanghai, 200136, China *For correspondence: [email protected] Abstract To seek the lead compound with the activity of antagonistic aquatic pathogenic bacteria in Antarctica fungi, the work identified species of a previously collected fungus with high sensitivity to Aeromonas hydrophila ATCC7966 and Streptococcus agalactiae. Potential active compounds were separated from fermentation broth by activity tracking and identified in structure by spectrum. The results showed that this fungus had common characteristics as Basidiomycota in morphology. According to 18S rDNA and internal transcribed space (ITS) DNA sequencing, this fungus was identified as Bjerkandera adusta in family Meruliaceae. Two active compounds viz., veratric acid and erythro-1-(3, 5-dichlone-4- methoxyphenyl)-1, 2-propylene glycol were identified by nuclear magnetic resonance spectrum and mass spectrum. Veratric acid was separated for the first time from any fungus, while erythro-1-(3, 5-dichlone-4-methoxyphenyl)-1, 2-propylene glycol was once reported in Bjerkandera. -
Basidiomycetes Inhabiting the Ornamental Tree Catalpa (Bignoniaceae)
©Österreichische Mykologische Gesellschaft, Austria, download unter www.biologiezentrum.at Österr. Z. Pilzk. 19(2010) Basidiomycetes inhabiting the ornamental tree Catalpa (Bignoniaceae) JURAJ PACLT Nam Benku, Martina 24/4083 81107 Bratislava 1, Slovakia Accepted 11. 1.2010 Key words: Basidiomycetes. - Fungus-host associations, Catalpa. Abstract: Attention is paid to all basidiomycetous species hitherto known to occur on Catalpa as host plant. During 1955-1997 more than 20 new fungus-host associations from diverse species of Catalpa grown in Europe could be found by the author. Zusammenfassung: Basidiomyzeten, die bisher von Catalpa als Wirtspflanze bekannt sind, werden aufgeführt. Dem Autor gelang es, 1955-1997 mehr als zwanzig neue Pilz-Wirt-Assoziationen von ver- schiedenen in Europa angepflanzten Catalpa-Artcn zu finden. Catalpa SCOP. (Bignoniaceae), called cigar-tree in the USA, a genus native to the United States of America [Southern Catalpa = C. hignonioides WALTER, Hardy Ca- talpa = C. speciosa (WARDER ex BARNEY) ENGELM.], West Indies and/or China. Common species of the genus are favoured as ornamental trees due to their showy panicles of flowers and long cigar-like pendent capsular fruits as well. In Europe, spe- cies of Catalpa are often cultivated as park- and street-trees. OUDEMANS (1923) mentioned only four species of Basidiomycetes for Catalpa, i.e., Polyponts distortus (= Abortipoms biennis). Pistil/aha mucedina. Pistil/aria mucoroides, and Polyponis distinctus (nomen dubium). Six further basidiomycetous species collected on Catalpa were listed in the next host index by SEYMOUR (1929): Exidia saccharina, Polyponis adustus (= Bjerkandera adusta), Schizophyllum commune, Stereum albobadium (= Dendrophora alhobadia), Stereum versicolor, and Trametes sepium (= Antrodia al- bida). -
New Records of Polypores from Iran, with a Checklist of Polypores for Gilan Province
CZECH MYCOLOGY 68(2): 139–148, SEPTEMBER 27, 2016 (ONLINE VERSION, ISSN 1805-1421) New records of polypores from Iran, with a checklist of polypores for Gilan Province 1 2 MOHAMMAD AMOOPOUR ,MASOOMEH GHOBAD-NEJHAD *, 1 SEYED AKBAR KHODAPARAST 1 Department of Plant Protection, Faculty of Agricultural Sciences, University of Gilan, P.O. Box 41635-1314, Rasht 4188958643, Iran. 2 Department of Biotechnology, Iranian Research Organization for Science and Technology (IROST), P.O. Box 3353-5111, Tehran 3353136846, Iran; [email protected] *corresponding author Amoopour M., Ghobad-Nejhad M., Khodaparast S.A. (2016): New records of polypores from Iran, with a checklist of polypores for Gilan Province. – Czech Mycol. 68(2): 139–148. As a result of a survey of poroid basidiomycetes in Gilan Province, Antrodiella fragrans, Ceriporia aurantiocarnescens, Oligoporus tephroleucus, Polyporus udus,andTyromyces kmetii are newly reported from Iran, and the following seven species are reported as new to this province: Coriolopsis gallica, Fomitiporia punctata, Hapalopilus nidulans, Inonotus cuticularis, Oligo- porus hibernicus, Phylloporia ribis,andPolyporus tuberaster. An updated checklist of polypores for Gilan Province is provided. Altogether, 66 polypores are known from Gilan up to now. Key words: fungi, hyrcanian forests, poroid basidiomycetes. Article history: received 28 July 2016, revised 13 September 2016, accepted 14 September 2016, published online 27 September 2016. Amoopour M., Ghobad-Nejhad M., Khodaparast S.A. (2016): Nové nálezy chorošů pro Írán a checklist chorošů provincie Gilan. – Czech Mycol. 68(2): 139–148. Jako výsledek systematického výzkumu chorošotvarých hub v provincii Gilan jsou publikovány nové druhy pro Írán: Antrodiella fragrans, Ceriporia aurantiocarnescens, Oligoporus tephroleu- cus, Polyporus udus a Tyromyces kmetii. -
Re-Thinking the Classification of Corticioid Fungi
mycological research 111 (2007) 1040–1063 journal homepage: www.elsevier.com/locate/mycres Re-thinking the classification of corticioid fungi Karl-Henrik LARSSON Go¨teborg University, Department of Plant and Environmental Sciences, Box 461, SE 405 30 Go¨teborg, Sweden article info abstract Article history: Corticioid fungi are basidiomycetes with effused basidiomata, a smooth, merulioid or Received 30 November 2005 hydnoid hymenophore, and holobasidia. These fungi used to be classified as a single Received in revised form family, Corticiaceae, but molecular phylogenetic analyses have shown that corticioid fungi 29 June 2007 are distributed among all major clades within Agaricomycetes. There is a relative consensus Accepted 7 August 2007 concerning the higher order classification of basidiomycetes down to order. This paper Published online 16 August 2007 presents a phylogenetic classification for corticioid fungi at the family level. Fifty putative Corresponding Editor: families were identified from published phylogenies and preliminary analyses of unpub- Scott LaGreca lished sequence data. A dataset with 178 terminal taxa was compiled and subjected to phy- logenetic analyses using MP and Bayesian inference. From the analyses, 41 strongly Keywords: supported and three unsupported clades were identified. These clades are treated as fam- Agaricomycetes ilies in a Linnean hierarchical classification and each family is briefly described. Three ad- Basidiomycota ditional families not covered by the phylogenetic analyses are also included in the Molecular systematics classification. All accepted corticioid genera are either referred to one of the families or Phylogeny listed as incertae sedis. Taxonomy ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Introduction develop a downward-facing basidioma. -
Polypore Diversity in North America with an Annotated Checklist
Mycol Progress (2016) 15:771–790 DOI 10.1007/s11557-016-1207-7 ORIGINAL ARTICLE Polypore diversity in North America with an annotated checklist Li-Wei Zhou1 & Karen K. Nakasone2 & Harold H. Burdsall Jr.2 & James Ginns3 & Josef Vlasák4 & Otto Miettinen5 & Viacheslav Spirin5 & Tuomo Niemelä 5 & Hai-Sheng Yuan1 & Shuang-Hui He6 & Bao-Kai Cui6 & Jia-Hui Xing6 & Yu-Cheng Dai6 Received: 20 May 2016 /Accepted: 9 June 2016 /Published online: 30 June 2016 # German Mycological Society and Springer-Verlag Berlin Heidelberg 2016 Abstract Profound changes to the taxonomy and classifica- 11 orders, while six other species from three genera have tion of polypores have occurred since the advent of molecular uncertain taxonomic position at the order level. Three orders, phylogenetics in the 1990s. The last major monograph of viz. Polyporales, Hymenochaetales and Russulales, accom- North American polypores was published by Gilbertson and modate most of polypore species (93.7 %) and genera Ryvarden in 1986–1987. In the intervening 30 years, new (88.8 %). We hope that this updated checklist will inspire species, new combinations, and new records of polypores future studies in the polypore mycota of North America and were reported from North America. As a result, an updated contribute to the diversity and systematics of polypores checklist of North American polypores is needed to reflect the worldwide. polypore diversity in there. We recognize 492 species of polypores from 146 genera in North America. Of these, 232 Keywords Basidiomycota . Phylogeny . Taxonomy . species are unchanged from Gilbertson and Ryvarden’smono- Wood-decaying fungus graph, and 175 species required name or authority changes. -
A New Morphological Arrangement of the Polyporales. I
A new morphological arrangement of the Polyporales. I. Phanerochaetineae © Ivan V. Zmitrovich, Vera F. Malysheva,* Wjacheslav A. Spirin** V.L. Komarov Botanical Institute RAS, Prof. Popov str. 2, 197376, St-Petersburg, Russia e-mail: [email protected], *[email protected], **[email protected] Zmitrovich I.V., Malysheva V.F., Spirin W.A. A new morphological arrangement of the Polypo- rales. I. Phanerochaetineae. Mycena. 2006. Vol. 6. P. 4–56. UDC 582.287.23:001.4. SUMMARY: A new taxonomic division of the suborder Phanerochaetineae of the order Polyporales is presented. The suborder covers five families, i.e. Faerberiaceae Pouzar, Fistuli- naceae Lotsy (including Jülich’s Bjerkanderaceae, Grifolaceae, Hapalopilaceae, and Meripi- laceae), Laetiporaceae Jülich (=Phaeolaceae Jülich), and Phanerochaetaceae Jülich. As a basis of the suggested subdivision, features of basidioma micromorphology are regarded, with special attention to hypha/epibasidium ratio. Some generic concepts are changed. New genera Raduliporus Spirin & Zmitr. (type Polyporus aneirinus Sommerf. : Fr.), Emmia Zmitr., Spirin & V. Malysheva (type Polyporus latemarginatus Dur. & Mont.), and Leptochaete Zmitr. & Spirin (type Thelephora sanguinea Fr. : Fr.) are described. The genus Byssomerulius Parmasto is proposed to be conserved versus Dictyonema C. Ag. The genera Abortiporus Murrill and Bjer- kandera P. Karst. are reduced to Grifola Gray. In total, 69 new combinations are proposed. The species Emmia metamorphosa (Fuckel) Spirin, Zmitr. & Malysheva (commonly known as Ceri- poria metamorphosa (Fuckel) Ryvarden & Gilb.) is reported as new to Russia. Key words: aphyllophoroid fungi, corticioid fungi, Dictyonema, Fistulinaceae, homo- basidiomycetes, Laetiporaceae, merulioid fungi, Phanerochaetaceae, phylogeny, systematics I. INTRODUCTORY NOTES There is no general agreement how to outline the limits of the forms which should be called phanerochaetoid fungi. -
Author Template for Journal Articles
Metal phytoremediation and nutrient accumulation Kaur et al. Int J Env Tech Sci 7: 249–252 © 2019 http://www.kalyanishineindia.org/index.php/journal ORIGINAL ARTICLE Kalyani Shine India Bioaccumulation of several trace metal elements in fungi collected from Gharbia Governorate, Egypt Mohamed Y A Bedaiwy, Yehia A-G Mahmoud Tanta University, Faculty of Science, Botany Department, Mycology Research Laboratory, Tanta 31527, Egypt ARTICLE INFO ABSTRACT Article history: The determination of trace metal elements in fungi is important from an economic Received– 01 March, 2019 point of view, since fungi are used for human or animal consumption and/or as Revised– 01 April, 2019 biofertilizers for plants. Furthermore, trace metal concentrations could be a good Accepted– 02 May, 2019 indicator for soil heath and contamination due to human interference. The present Available– 12 May, 2019 study determined the silver, cadmium, cobalt, chromium, nickel, lead, selenium, (online) zinc and aluminium concentrations in the sporocarps of wild Ganoderma Keywords: resinaceum, Bjerkandera adusta, Ganoderma applanatum, Inonotus radiatus and Metals Abortiporus biennis collected from Gharbia Governorate, Egypt, during 2017- Contamination 2018. The highest zinc concentrations, i.e., values of 39.10 and 42.35 mg kg-1, Sporocarp were recorded in fungi sporocarps gathered from the Zefta and Alsantah urban Ganoderma sp. areas of Gharbia Governorate, respectively. Neither cadmium nor cobalt was Bjerkandera sp. observed in the sporocarps of the five species gathered during this investigation Ganoderma sp. period. The aluminium contents of the five studied higher fungi species were Inonotus sp. higher than the other trace metals contents of these fungi, reaching 3058 mg kg-1 Abortiporus sp.