Terrestrial Adaptation of Green Algae Klebsormidium and Zygnema (Charophyta) Involves Diversity in Photosynthetic Traits but Not in CO2 Acquisition
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Induction of Conjugation and Zygospore Cell Wall Characteristics
plants Article Induction of Conjugation and Zygospore Cell Wall Characteristics in the Alpine Spirogyra mirabilis (Zygnematophyceae, Charophyta): Advantage under Climate Change Scenarios? Charlotte Permann 1 , Klaus Herburger 2 , Martin Felhofer 3 , Notburga Gierlinger 3 , Louise A. Lewis 4 and Andreas Holzinger 1,* 1 Department of Botany, Functional Plant Biology, University of Innsbruck, 6020 Innsbruck, Austria; [email protected] 2 Section for Plant Glycobiology, Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg, Denmark; [email protected] 3 Department of Nanobiotechnology, University of Natural Resources and Life Sciences Vienna (BOKU), 1190 Vienna, Austria; [email protected] (M.F.); [email protected] (N.G.) 4 Department of Ecology and Evolutionary Biology, University of Conneticut, Storrs, CT 06269-3043, USA; [email protected] * Correspondence: [email protected] Abstract: Extreme environments, such as alpine habitats at high elevation, are increasingly exposed to man-made climate change. Zygnematophyceae thriving in these regions possess a special means Citation: Permann, C.; Herburger, K.; of sexual reproduction, termed conjugation, leading to the formation of resistant zygospores. A field Felhofer, M.; Gierlinger, N.; Lewis, sample of Spirogyra with numerous conjugating stages was isolated and characterized by molec- L.A.; Holzinger, A. Induction of ular phylogeny. We successfully induced sexual reproduction under laboratory conditions by a Conjugation and Zygospore Cell Wall transfer to artificial pond water and increasing the light intensity to 184 µmol photons m−2 s−1. Characteristics in the Alpine Spirogyra This, however was only possible in early spring, suggesting that the isolated cultures had an inter- mirabilis (Zygnematophyceae, nal rhythm. -
Seed Plant Models
Review Tansley insight Why we need more non-seed plant models Author for correspondence: Stefan A. Rensing1,2 Stefan A. Rensing 1 2 Tel: +49 6421 28 21940 Faculty of Biology, University of Marburg, Karl-von-Frisch-Str. 8, 35043 Marburg, Germany; BIOSS Biological Signalling Studies, Email: stefan.rensing@biologie. University of Freiburg, Sch€anzlestraße 18, 79104 Freiburg, Germany uni-marburg.de Received: 30 October 2016 Accepted: 18 December 2016 Contents Summary 1 V. What do we need? 4 I. Introduction 1 VI. Conclusions 5 II. Evo-devo: inference of how plants evolved 2 Acknowledgements 5 III. We need more diversity 2 References 5 IV. Genomes are necessary, but not sufficient 3 Summary New Phytologist (2017) Out of a hundred sequenced and published land plant genomes, four are not of flowering plants. doi: 10.1111/nph.14464 This severely skewed taxonomic sampling hinders our comprehension of land plant evolution at large. Moreover, most genetically accessible model species are flowering plants as well. If we are Key words: Charophyta, evolution, fern, to gain a deeper understanding of how plants evolved and still evolve, and which of their hornwort, liverwort, moss, Streptophyta. developmental patterns are ancestral or derived, we need to study a more diverse set of plants. Here, I thus argue that we need to sequence genomes of so far neglected lineages, and that we need to develop more non-seed plant model species. revealed much, the exact branching order and evolution of the I. Introduction nonbilaterian lineages is still disputed (Lanna, 2015). Research on animals has for a long time relied on a number of The first (small) plant genome to be sequenced was of THE traditional model organisms, such as mouse, fruit fly, zebrafish or model plant, the weed Arabidopsis thaliana (c. -
Zygnema Circumcarinatum SAG 698-1A and SAG 698-1B) and a Rapid Method to Estimate Nuclear Genome Size of Zygnematophycean Green Algae
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Faculty Publications in Food Science and Technology Food Science and Technology Department 2021 Characterization of Two Zygnema Strains (Zygnema circumcarinatum SAG 698-1a and SAG 698-1b) and a Rapid Method to Estimate Nuclear Genome Size of Zygnematophycean Green Algae Xuehuan Feng University of Nebraska-Lincoln, [email protected] Andreas Holzinger University of Innsbruck, [email protected] Charlotte Permann University of Innsbruck Dirk Anderson University of Innsbruck Yanbin Yin University of Nebraska – Lincoln, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/foodsciefacpub Part of the Food Science Commons Feng, Xuehuan; Holzinger, Andreas; Permann, Charlotte; Anderson, Dirk; and Yin, Yanbin, "Characterization of Two Zygnema Strains (Zygnema circumcarinatum SAG 698-1a and SAG 698-1b) and a Rapid Method to Estimate Nuclear Genome Size of Zygnematophycean Green Algae" (2021). Faculty Publications in Food Science and Technology. 412. https://digitalcommons.unl.edu/foodsciefacpub/412 This Article is brought to you for free and open access by the Food Science and Technology Department at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Faculty Publications in Food Science and Technology by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. fpls-12-610381 February 4, 2021 Time: 15:26 # 1 ORIGINAL RESEARCH published: 10 February 2021 doi: 10.3389/fpls.2021.610381 -
CONTROL of CELL DIVISION in the FILAMENTOUS, GREEN ALGA ZYGNEMA by Robert Dale Staker a Thesis Submitted to the Faculty of the D
Control of cell division in the filamentous green alga Zygnema Item Type text; Thesis-Reproduction (electronic) Authors Staker, Robert Dale, 1945- Publisher The University of Arizona. Rights Copyright © is held by the author. Digital access to this material is made possible by the University Libraries, University of Arizona. Further transmission, reproduction or presentation (such as public display or performance) of protected items is prohibited except with permission of the author. Download date 25/09/2021 05:42:58 Link to Item http://hdl.handle.net/10150/318132 CONTROL OF CELL DIVISION IN THE FILAMENTOUS, GREEN ALGA ZYGNEMA by Robert Dale Staker A Thesis Submitted to the Faculty of the DEPARTMENT OF BIOLOGICAL SCIENCES In Partial Fulfillment of the Requirements For the Degree of MASTER OF SCIENCE WITH A MAJOR IN BOTANY In the Graduate College THE UNIVERSITY OF ARIZONA 1 9 7 S STATEMENT BY AUTHOR This thesis has been submitted in partial fulfill ment of requirements for an advanced degree at The University of Arizona and is deposited in the University Library to be made available to borrowers under rules of the Library, Brief quotations from this thesis are allowable without special permission, provided that accurate acknowledgment of source is made. Requests for permission for extended quotation from or reproduction of this manuscript in whole or in part may be granted by the head of the major department or the Dean of the Graduate College when in his judgment the proposed use of the material is in the interests of scholarship. In all other instances, however, permission must be obtained from the author. -
Evolution of Land Plants P
Chapter 4. The evolutionary classification of land plants The evolutionary classification of land plants Land plants evolved from a group of green algae, possibly as early as 500–600 million years ago. Their closest living relatives in the algal realm are a group of freshwater algae known as stoneworts or Charophyta. According to the fossil record, the charophytes' growth form has changed little since the divergence of lineages, so we know that early land plants evolved from a branched, filamentous alga dwelling in shallow fresh water, perhaps at the edge of seasonally-desiccating pools. The biggest challenge that early land plants had to face ca. 500 million years ago was surviving in dry, non-submerged environments. Algae extract nutrients and light from the water that surrounds them. Those few algae that anchor themselves to the bottom of the waterbody do so to prevent being carried away by currents, but do not extract resources from the underlying substrate. Nutrients such as nitrogen and phosphorus, together with CO2 and sunlight, are all taken by the algae from the surrounding waters. Land plants, in contrast, must extract nutrients from the ground and capture CO2 and sunlight from the atmosphere. The first terrestrial plants were very similar to modern mosses and liverworts, in a group called Bryophytes (from Greek bryos=moss, and phyton=plants; hence “moss-like plants”). They possessed little root-like hairs called rhizoids, which collected nutrients from the ground. Like their algal ancestors, they could not withstand prolonged desiccation and restricted their life cycle to shaded, damp habitats, or, in some cases, evolved the ability to completely dry-out, putting their metabolism on hold and reviving when more water arrived, as in the modern “resurrection plants” (Selaginella). -
A Review of the Late Jurassic–Early Cretaceous Charophytes from The
A review of the Late Jurassic–Early Cretaceous charophytes from the northern Aquitaine Basin in south-west France Roch-Alexandre Benoit, Didier Néraudeau, Carles Martin-Closas To cite this version: Roch-Alexandre Benoit, Didier Néraudeau, Carles Martin-Closas. A review of the Late Jurassic– Early Cretaceous charophytes from the northern Aquitaine Basin in south-west France. Cretaceous Research, Elsevier, 2017, 79, pp.199-213. <10.1016/j.cretres.2017.07.009>. <insu-01574653> HAL Id: insu-01574653 https://hal-insu.archives-ouvertes.fr/insu-01574653 Submitted on 16 Aug 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Accepted Manuscript A review of the Late Jurassic–Early Cretaceous charophytes from the northern Aquitaine Basin in south-west France Roch-Alexandre Benoit, Didier Neraudeau, Carles Martín-Closas PII: S0195-6671(17)30121-0 DOI: 10.1016/j.cretres.2017.07.009 Reference: YCRES 3658 To appear in: Cretaceous Research Received Date: 13 March 2017 Revised Date: 5 July 2017 Accepted Date: 17 July 2017 Please cite this article as: Benoit, R.-A., Neraudeau, D., Martín-Closas, C., A review of the Late Jurassic–Early Cretaceous charophytes from the northern Aquitaine Basin in south-west France, Cretaceous Research (2017), doi: 10.1016/j.cretres.2017.07.009. -
Supplementary Information the Biodiversity and Geochemistry Of
Supplementary Information The Biodiversity and Geochemistry of Cryoconite Holes in Queen Maud Land, East Antarctica Figure S1. Principal component analysis of the bacterial OTUs. Samples cluster according to habitats. Figure S2. Principal component analysis of the eukaryotic OTUs. Samples cluster according to habitats. Figure S3. Principal component analysis of selected trace elements that cause the separation (primarily Zr, Ba and Sr). Figure S4. Partial canonical correspondence analysis of the bacterial abundances and all non-collinear environmental variables (i.e., after identification and exclusion of redundant predictor variables) and without spatial effects. Samples from Lake 3 in Utsteinen clustered with higher nitrate concentration and samples from Dubois with a higher TC abundance. Otherwise no clear trends could be observed. Table S1. Number of sequences before and after quality control for bacterial and eukaryotic sequences, respectively. 16S 18S Sample ID Before quality After quality Before quality After quality filtering filtering filtering filtering PES17_36 79285 71418 112519 112201 PES17_38 115832 111434 44238 44166 PES17_39 128336 123761 31865 31789 PES17_40 107580 104609 27128 27074 PES17_42 225182 218495 103515 103323 PES17_43 219156 213095 67378 67199 PES17_47 82531 79949 60130 59998 PES17_48 123666 120275 64459 64306 PES17_49 163446 158674 126366 126115 PES17_50 107304 104667 158362 158063 PES17_51 95033 93296 - - PES17_52 113682 110463 119486 119205 PES17_53 126238 122760 72656 72461 PES17_54 120805 117807 181725 181281 PES17_55 112134 108809 146821 146408 PES17_56 193142 187986 154063 153724 PES17_59 226518 220298 32560 32444 PES17_60 186567 182136 213031 212325 PES17_61 143702 140104 155784 155222 PES17_62 104661 102291 - - PES17_63 114068 111261 101205 100998 PES17_64 101054 98423 70930 70674 PES17_65 117504 113810 192746 192282 Total 3107426 3015821 2236967 2231258 Table S2. -
Tagungsband Münster 2007
DGL DEUTSCHE GESELLSCHAFT FÜR LIMNOLOGIE e.V. (German Limnological Society) Erweiterte Zusammenfassungen der Jahrestagung 2007 der Deutschen Gesellschaft für Limnologie (DGL) und der deutschen und österreichischen Sektion der Societas Internationalis Limnologiae (SIL) Münster, 24. - 28. September 2007 Impressum: Deutsche Gesellschaft für Limnologie e.V.: vertreten durch den Schriftführer; Dr. Ralf Köhler, Am Waldrand 16, 14542 Werder/Havel. Erweiterte Zusammenfassungen der Tagung in Münster 2007 Eigenverlag der DGL, Werder 2008 Redaktion und Layout: Geschäftsstelle der DGL, Dr. J. Bäthe, Dr. Eckhard Coring & Ralf Förstermann Druck: Hubert & Co. GmbH & Co. KG Robert-Bosch-Breite 6, 37079 Göttingen ISBN-Nr. 978-3-9805678-9-3 Bezug über die Geschäftsstelle der DGL: Lange Str. 9, 37181 Hardegsen Tel.: 05505-959046 Fax: 05505-999707 eMail: [email protected] * www.dgl-ev.de Kosten inkl. Versand: als CD-ROM € 10.--; Druckversion: € 25.-- DGL - Erweiterte Zusammenfassungen der Jahrestagung 2007 (Münster) - Inhaltsverzeichnis INHALT, GESAMTVERZEICHNIS NACH THEMENGRUPPEN SEITE DGL NACHWUCHSPREIS: 1 FINK, P.: Schlechte Futterqualität und wie man damit umgehen kann: die Ernährungsökologie einer Süßwasserschnecke 2 SCHMIDT, M. B.: Einsatz von Hydroakustik zum Fischereimanagement und für Verhaltensstudien bei Coregonen 7 TIROK, K. & U. GAEDKE: Klimawandel: Der Einfluss von Globalstrahlung, vertikaler Durchmischung und Temperatur auf die Frühjahrsdynamik von Algen – eine datenbasierte Modellstudie 11 POSTERPRÄMIERUNG: 16 BLASCHKE, U., N. BAUER & S. HILT: Wer ist der Sensibelste? Vergleich der Sensitivität verschiedener Algen- und Cyanobakterien-Arten gegenüber Tanninsäure als allelopathisch wirksamer Substanz 17 GABEL, F., X.-F. GARCIA, M. BRAUNS & M. PUSCH: Steinschüttungen als Ersatzrefugium für litorales Makrozoobenthos bei schiffsinduziertem Wellenschlag? 22 KOPPE, C., L. KRIENITZ & H.-P. GROSSART: Führen heterotrophe Bakterien zu Veränderungen in der Physiologie und Morphologie von Phytoplankton? 27 PARADOWSKI, N., H. -
The Charophytes (Charophyta) Locality in the Milkha Stream, Lower Jordan, Israel
Natural Resources and Conservation 3(2): 19-30, 2015 http://www.hrpub.org DOI: 10.13189/nrc.2015.030201 The Charophytes (Charophyta) Locality in the Milkha Stream, Lower Jordan, Israel Sophia Barinova1,*, Roman Romanov2 1Institute of Evolution, University of Haifa, Israel 2Central Siberian Botanical Garden of the Siberian Branch of the Russian Academy of Sciences, Russia Copyright © 2015 by authors, all rights reserved. Authors agree that this article remains permanently open access under the terms of the Creative Commons Attribution License 4.0 International License Abstract First study of new locality the Milkha Stream, revealed 14 charophyte species (16 with ifraspecific variety) the Lower Jordan River tributary, with charophyte algae, in that known for Israel [3,4] from references and our studies. semi-arid region of Israel has been implemented for Last year research in Israel and Eastern Mediterranean let us revealing of algal diversity and ecological assessment of the too includes few new localities, algal diversity of which has water object environment by bio-indication methods. been never studied before [5-10]. Altogether forty seven species from five taxonomic The charophytes prefer alkaline water environment which Divisions of algae and cyanobacteria including one of them forms on the carbonates that are very distributed in studied macro-algae Chara gymnophylla A. Braun were revealed in region. This alkaline freshwater environment can be assessed the Milkha stream. Chara was found in growth in the lower as perspective for find new, unstudied aquatic objects in part of studied stream but away from community in followed which can be identified charophyte algae. The most years. -
Examining Morphological and Physiological Changes in Zygnema Irregulare During a Desiccation and Recovery Period
CALIFORNIA STATE UNIVERSITY SAN MARCOS THESIS SIGNATURE PAGE THESIS SUBMITTED IN PARTIAL FULLFILLMENT OF THE REQUIREMENTS FOR THE DEGREE MASTER OF SCIENCE IN BIOLOGICAL SCIENCES THESIS TITLE: Examining morphological and physiological changes in Zygnema irregulare during a desiccation and recovery period AUTHOR: Christina Fuller DATE OF SUCCESSFUL DEFENSE: December 06, 2013 THE THESIS HAS BEEN ACCEPTED BY THE THESIS COMMITTEE IN PARTIAL FULLFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE IN BIOLOGICAL SCIENCES. Dr. Robert Sheath ~A4..Jf!; 12./ 61t1 THESIS COMMITTEE CHAIR SIGNATURE OAT _, ~ 1 Dr. Betsy Read ,e.; ~r 1a THESIS COMMITTEE MEMBER DATE Dr. William Kristan t7-l r, /r; THESIS COMMITTEE MEMBER DATE Dr. Betty Fetscher THESIS COMMITTEE MEMBER Examining morphological and physiological changes in Zygnema irregulare during a desiccation and recovery period Christina L. Fuller Master’s Thesis Department of Biological Sciences Dr. Robert Sheath, advisor California State University San Marcos 1 Table of Contents ABSTRACT .............................................................................................................................. 3 INTRODUCTION ....................................................................................................................... 4 MATERIALS AND METHODS ................................................................................................. 12 RESULTS .............................................................................................................................. -
Identification of 13 Spirogyra Species (Zygnemataceae) by Traits of Sexual Reproduction Induced Under Laboratory Culture Conditions
www.nature.com/scientificreports OPEN Identifcation of 13 Spirogyra species (Zygnemataceae) by traits of sexual reproduction induced Received: 16 November 2018 Accepted: 23 April 2019 under laboratory culture conditions Published: xx xx xxxx Tomoyuki Takano1,6, Sumio Higuchi2, Hisato Ikegaya3, Ryo Matsuzaki4, Masanobu Kawachi4, Fumio Takahashi5 & Hisayoshi Nozaki 1 The genus Spirogyra is abundant in freshwater habitats worldwide, and comprises approximately 380 species. Species assignment is often difcult because identifcation is based on the characteristics of sexual reproduction in wild-collected samples and spores produced in the feld or laboratory culture. We developed an identifcation procedure based on an improved methodology for inducing sexual conjugation in laboratory-cultivated flaments. We tested the modifed procedure on 52 newly established and genetically diferent strains collected from diverse localities in Japan. We induced conjugation or aplanospore formation under controlled laboratory conditions in 15 of the 52 strains, which allowed us to identify 13 species. Two of the thirteen species were assignable to a related but taxonomically uncertain genus, Temnogyra, based on the unique characteristics of sexual reproduction. Our phylogenetic analysis demonstrated that the two Temnogyra species are included in a large clade comprising many species of Spirogyra. Thus, separation of Temnogyra from Spirogyra may be untenable, much as the separation of Sirogonium from Spirogyra is not supported by molecular analyses. Spirogyra Link (Zygnemataceae, Zygnematales) is a genus in the Class Zygnematophyceae (Conjugatophyceae), which is a component member of the Infrakingdom Streptophyta1,2. Spirogyra has long been included in high school biology curricula. Te genus is widely distributed in freshwater habitats including fowing water, perma- nent ponds and temporary pools3. -
Conifers Exhibit a Characteristic Inactivation of Auxin to Maintain Tissue
bioRxiv preprint doi: https://doi.org/10.1101/789420; this version posted October 1, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Title Conifers exhibit a characteristic inactivation of auxin to maintain tissue homeostasis Authors Federica Brunoni1,2,a, Silvio Collani1, Rubén Casanova-Saéz2, Jan Šimura2, Michal Karady2,a, Markus Schmid1, Karin Ljung2,b and Catherine Bellini1,3,b 1 Umeå Plant Science Centre, Dept of Plant Physiology, Umeå University (Umu), Umeå, Sweden 2 Umeå Plant Science Centre, Dept of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences (SLU), Umeå, Sweden 3 Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech Versailles, France a Present address: Laboratory of Growth Regulators, Faculty of Science, Palacký University & Institute of Experimental Botany, The Czech Academy of Sciences, Šlechtitelů 27, CZ- 78371, Olomouc, Czech Republic b to whom correspondence may be addressed. Email: [email protected] or [email protected] or [email protected] Summary • Dynamic regulation of the levels of the natural auxin, indol-3-acetic acid (IAA), is essential to coordinate most of the physiological and developmental processes and responses to environmental changes. Oxidation of IAA is a major pathway to control auxin concentrations in Arabidopsis and, along with IAA conjugation, to respond to perturbation of IAA homeostasis. However, these regulatory mechanisms are still poorly investigated in conifers. To reduce this gap of knowledge, we investigated the different contribution of the IAA inactivation pathways in conifers. • Mass spectrometry-based quantification of IAA metabolites under steady state conditions and after perturbation was investigated to evaluate IAA homeostasis in bioRxiv preprint doi: https://doi.org/10.1101/789420; this version posted October 1, 2019.