Downloaded from Brill.Com10/04/2021 04:39:43PM Via Free Access 4 E
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution
marine drugs Review A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution Adrian Galitz 1 , Yoichi Nakao 2 , Peter J. Schupp 3,4 , Gert Wörheide 1,5,6 and Dirk Erpenbeck 1,5,* 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany; [email protected] (A.G.); [email protected] (G.W.) 2 Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku-ku, Tokyo 169-8555, Japan; [email protected] 3 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, 26111 Wilhelmshaven, Germany; [email protected] 4 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg (HIFMB), 26129 Oldenburg, Germany 5 GeoBio-Center, Ludwig-Maximilians-Universität München, 80333 Munich, Germany 6 SNSB-Bavarian State Collection of Palaeontology and Geology, 80333 Munich, Germany * Correspondence: [email protected] Abstract: Marine sponges are the most prolific marine sources for discovery of novel bioactive compounds. Sponge secondary metabolites are sought-after for their potential in pharmaceutical applications, and in the past, they were also used as taxonomic markers alongside the difficult and homoplasy-prone sponge morphology for species delineation (chemotaxonomy). The understanding Citation: Galitz, A.; Nakao, Y.; of phylogenetic distribution and distinctiveness of metabolites to sponge lineages is pivotal to reveal Schupp, P.J.; Wörheide, G.; pathways and evolution of compound production in sponges. This benefits the discovery rate and Erpenbeck, D. A Soft Spot for yield of bioprospecting for novel marine natural products by identifying lineages with high potential Chemistry–Current Taxonomic and Evolutionary Implications of Sponge of being new sources of valuable sponge compounds. -
Proposal for a Revised Classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3*
Morrow and Cárdenas Frontiers in Zoology (2015) 12:7 DOI 10.1186/s12983-015-0099-8 DEBATE Open Access Proposal for a revised classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3* Abstract Background: Demospongiae is the largest sponge class including 81% of all living sponges with nearly 7,000 species worldwide. Systema Porifera (2002) was the result of a large international collaboration to update the Demospongiae higher taxa classification, essentially based on morphological data. Since then, an increasing number of molecular phylogenetic studies have considerably shaken this taxonomic framework, with numerous polyphyletic groups revealed or confirmed and new clades discovered. And yet, despite a few taxonomical changes, the overall framework of the Systema Porifera classification still stands and is used as it is by the scientific community. This has led to a widening phylogeny/classification gap which creates biases and inconsistencies for the many end-users of this classification and ultimately impedes our understanding of today’s marine ecosystems and evolutionary processes. In an attempt to bridge this phylogeny/classification gap, we propose to officially revise the higher taxa Demospongiae classification. Discussion: We propose a revision of the Demospongiae higher taxa classification, essentially based on molecular data of the last ten years. We recommend the use of three subclasses: Verongimorpha, Keratosa and Heteroscleromorpha. We retain seven (Agelasida, Chondrosiida, Dendroceratida, Dictyoceratida, Haplosclerida, Poecilosclerida, Verongiida) of the 13 orders from Systema Porifera. We recommend the abandonment of five order names (Hadromerida, Halichondrida, Halisarcida, lithistids, Verticillitida) and resurrect or upgrade six order names (Axinellida, Merliida, Spongillida, Sphaerocladina, Suberitida, Tetractinellida). Finally, we create seven new orders (Bubarida, Desmacellida, Polymastiida, Scopalinida, Clionaida, Tethyida, Trachycladida). -
Porifera) in Singapore and Description of a New Species of Forcepia (Poecilosclerida: Coelosphaeridae)
Contributions to Zoology, 81 (1) 55-71 (2012) Biodiversity of shallow-water sponges (Porifera) in Singapore and description of a new species of Forcepia (Poecilosclerida: Coelosphaeridae) Swee-Cheng Lim1, 3, Nicole J. de Voogd2, Koh-Siang Tan1 1 Tropical Marine Science Institute, National University of Singapore, 18 Kent Ridge Road, Singapore 119227, Singapore 2 Netherlands Centre for Biodiversity, Naturalis, PO Box 9517, 2300 RA Leiden, The Netherlands 3 E-mail: [email protected] Key words: intertidal, Southeast Asia, sponge assemblage, subtidal, tropical Abstract gia) patera (Hardwicke, 1822) was the first sponge de- scribed from Singapore in the 19th century. This was A surprisingly high number of shallow water sponge species followed by Leucosolenia flexilis (Haeckel, 1872), (197) were recorded from extensive sampling of natural inter- Coelocarteria singaporensis (Carter, 1883) (as Phloeo tidal and subtidal habitats in Singapore (Southeast Asia) from May 2003 to June 2010. This is in spite of a highly modified dictyon), and Callyspongia (Cladochalina) diffusa coastline that encompasses one of the world’s largest container Ridley (1884). Subsequently, Dragnewitsch (1906) re- ports as well as extensive oil refining and bunkering industries. corded 24 sponge species from Tanjong Pagar and Pu- A total of 99 intertidal species was recorded in this study. Of lau Brani in the Singapore Strait. A further six species these, 53 species were recorded exclusively from the intertidal of sponge were reported from Singapore in the 1900s, zone and only 45 species were found on both intertidal and subtidal habitats, suggesting that tropical intertidal and subtidal although two species, namely Cinachyrella globulosa sponge assemblages are different and distinct. -
The Chemistry of Marine Sponges∗ 4 Sherif S
The Chemistry of Marine Sponges∗ 4 Sherif S. Ebada and Peter Proksch Contents 4.1 Introduction ................................................................................ 192 4.2 Alkaloids .................................................................................. 193 4.2.1 Manzamine Alkaloids ............................................................. 193 4.2.2 Bromopyrrole Alkaloids .......................................................... 196 4.2.3 Bromotyrosine Derivatives ....................................................... 208 4.3 Peptides .................................................................................... 217 4.4 Terpenes ................................................................................... 240 4.4.1 Sesterterpenes (C25)............................................................... 241 4.4.2 Triterpenes (C30).................................................................. 250 4.5 Concluding Remarks ...................................................................... 268 4.6 Study Questions ........................................................................... 269 References ....................................................................................... 270 Abstract Marine sponges continue to attract wide attention from marine natural product chemists and pharmacologists alike due to their remarkable diversity of bioac- tive compounds. Since the early days of marine natural products research in ∗The section on sponge-derived “terpenes” is from a review article published -
Revision of Rhabdastrella Distincta (Thiele, 1900)
Revision of Rhabdastrella distincta (Thiele, 1900) A re-description of the holotype and description of two recently re-collected specimens Anne Twaalfhoven (10149996) Biology BSc Thesis, July 2016 University of Amsterdam: dr. P. (Peter) Roessingh, [email protected] Naturalis Biodiversity Center, Leiden: dr. N.J. (Nicole) de Voogd, [email protected] Abstract Sponge taxonomy is largely founded upon outdated descriptions originating from pre-modern times. Luckily, the material that these descriptions are based upon is often still available in Natural History Collections. In this article two sponge samples collected in 2009 from Ternate, Indonesia are compared to the type material of Rhabdastrella distincta. The holotype was described in 1896 by Thiele (1900). This article reviews the material for the first time ever since. The two recently collected samples are the first records of the species since its description. Descriptions of all three samples are based upon external morphology, skeletal structure, spicule measurements and spicule analysis by electron microscopy. It is revealed that, contrary to previous descriptions, the spherasters of R. distincta are stubbed with spines. Consequently, it is argued that the relation of R. distincta to its fellow species should be reconsidered. Euasters of R. distincta POR 5341 Twaalfhoven, July 2016, UvA Introduction When researching environmental change and biodiversity, Natural History Collections (NHC’s) can be of high value. Former taxonomists collected and described large collections of specimens that now serve as the foundation of our current knowledge on marine biodiversity (Jackson, 2001; Hooper & van Soest, 2002; Hoeksema et al, 2011). For reef systems, systematic ecological observations and methodological sampling started no earlier than the 1930’s (Jackson, 2001), and most recent surveys only encompass relatively short timespans (Jackson, 2001; van der Meij et al., 2010; Lister, 2011; Hoeksema et al., 2011). -
Cytotoxic Compounds Derived from Marine Sponges. a Review (2010–2012)
molecules Review Cytotoxic Compounds Derived from Marine Sponges. A Review (2010–2012) Roberto Mioso 1,*, Francisco J. Toledo Marante 2, Ranilson de Souza Bezerra 1, Flávio Valadares Pereira Borges 3, Bárbara V. de Oliveira Santos 4,* and Irma Herrera Bravo de Laguna 5,* 1 Laboratory of Enzymology – LABENZ, Department of Biochemistry, Federal University of Pernambuco, Recife 50670-901, Pernambuco, Brazil; [email protected] 2 Department of Chemistry, University of Las Palmas de Gran Canaria, Las Palmas de Gran Canaria 35017, Spain; [email protected] 3 Post-Graduation Program in Natural Products and Synthetic Bioactives, Federal University of Paraíba, João Pessoa 58051-970, Paraíba, Brazil; fl[email protected] 4 Post-Graduation Program in Development and Technological Innovation in Medicines, Department of Pharmaceutical Sciences, Federal University of Paraiba, João Pessoa 58051-900, Paraíba, Brazil 5 Department of Biology, University of Las Palmas de Gran Canaria, Las Palmas de Gran Canaria 35017, Spain * Correspondence: [email protected] (R.M.); [email protected] (B.V.O.S.); [email protected] (I.H.B.L.); Tel./Fax: +55-83-3216-7364 (B.V.O.S.) Academic Editor: Derek J. McPhee Received: 27 September 2016; Accepted: 17 January 2017; Published: 28 January 2017 Abstract: This extensive review covers research published between 2010 and 2012 regarding new compounds derived from marine sponges, including 62 species from 60 genera belonging to 33 families and 13 orders of the Demospongia class (Porifera). The emphasis is on the cytotoxic activity that bioactive metabolites from sponges may have on cancer cell lines. At least 197 novel chemical structures from 337 compounds isolated have been found to support this work. -
[I]Porifera, Demospongiaep[/I]) Reveals an Unexpected High Level of Spicule Homoplasy Paco Cárdenas, Joana R
Molecular Phylogeny of the Astrophorida ([i]Porifera, Demospongiaep[/i]) Reveals an Unexpected High Level of Spicule Homoplasy Paco Cárdenas, Joana R. Xavier, Julie Reveillaud, Christoffer Schander, Hans Tore Rapp To cite this version: Paco Cárdenas, Joana R. Xavier, Julie Reveillaud, Christoffer Schander, Hans Tore Rapp. Molecular Phylogeny of the Astrophorida ([i]Porifera, Demospongiaep[/i]) Reveals an Unexpected High Level of Spicule Homoplasy. PLoS ONE, Public Library of Science, 2011, 6 (4), 18 p. 10.1371/jour- nal.pone.0018318. hal-01369354 HAL Id: hal-01369354 https://hal.archives-ouvertes.fr/hal-01369354 Submitted on 20 Sep 2016 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Molecular Phylogeny of the Astrophorida (Porifera, Demospongiaep) Reveals an Unexpected High Level of Spicule Homoplasy Paco Ca´rdenas1*¤, Joana R. Xavier2,3, Julie Reveillaud4,5, Christoffer Schander1,6, Hans Tore Rapp1,6 1 Department of Biology, University of Bergen, Bergen, Norway, 2 CIBIO – Research Centre for Biodiversity and Genetic Resources, CIBIO-Azores, Biology Department, University of the Azores, Azores, Portugal, 3 CEAB – Center for Advanced Studies of Blanes (CSIC), Blanes, Spain, 4 Marine Biology Section, Biology Department, Ghent University, Ghent, Belgium, 5 CeMoFE, Center for Molecular Phylogeny and Evolution, Ghent, Belgium, 6 Centre for Geobiology, University of Bergen, Bergen, Norway Abstract Background: The Astrophorida (Porifera, Demospongiaep) is geographically and bathymetrically widely distributed. -
Universidade Federal De Pernambuco Centro De Ciências Biológicas Departamento De Zoologia Programa De Pós-Graduação Em Biologia Animal
UNIVERSIDADE FEDERAL DE PERNAMBUCO CENTRO DE CIÊNCIAS BIOLÓGICAS DEPARTAMENTO DE ZOOLOGIA PROGRAMA DE PÓS-GRADUAÇÃO EM BIOLOGIA ANIMAL TAXONOMIA DE ESPONJAS MARINHAS DO LITORAL NORTE DE PERNAMBUCO HELCY GALINDO BARACHO CAVALCANTI RECIFE 2013 HELCY GALINDO BARACHO CAVALCANTI TAXONOMIA DAS ESPONJAS MARINHAS DO LITORAL NORTE DE PERNAMBUCO Dissertação apresentada à Coordenação do Programa de Pós-Graduação em Biologia Animal da Universidade Federal de Pernambuco como parte dos requisitos à obtenção do título de mestre. Orientador: Ulisses dos Santos Pinheiro RECIFE 2013 HELCY GALINDO BARACHO CAVALCANTI TAXONOMIA DAS ESPONJAS MARINHAS DO LITORAL NORTE DE PERNAMBUCO Dissertação apresentada à Coordenação do Programa de Pós-Graduação em Biologia Animal da Universidade Federal de Pernambuco como parte dos requisitos à obtenção do título de mestre. _____________________________________________ Dr. Ulisses dos Santos Pinheiro (Orientador). Departamento de Zoologia–UFPE. BANCA EXAMINADORA _____________________________________________ Dra. Mariana de Souza Carvalho (membro externo) Departamento de Invertebrados, Museu Nacional-UFRJ. _____________________________________________ Dr. André Morgado Esteves (membro interno) Departamento de Zoologia-UFPE. _____________________________________________ Dra. Luciana Iannuzzi (membro interno) Departamento de Zoologia-UFPE. _____________________________________________ Dr. José Roberto Botelho de Souza (suplente) Departamento de Zoologia-UFPE. _____________________________________________ Dra. Josivete Pinheiro dos Santos (suplente) RECIFE 2013 DEDICATÓRIA Dedico a Deus e a minha família pelo apoio, força, compreensão e estrutura para que eu conquistasse meu objetivo. AGRADECIMENTOS Agradeço primeiramente a Deus por me guiar, dar forças, esperança e oportunidade para seguir com meu trabalho. As pessoas que amo, como minha família, em especial minha avó, Dilene, e minha mãe, Elciene, por acreditar em meu potencial e estar ao meu lado em todos os momentos, além de meu irmão, Helmy, e meu avô, Manoel, que já não esta entre nós. -
Revision of the Genus Exsuperantia Özdikmen, 2009 (Tetractinellida: Phymaraphiniidae) with Description of a New Species from the Atlantic Ocean
Zootaxa 4613 (1): 135–151 ISSN 1175-5326 (print edition) https://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2019 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4613.1.7 http://zoobank.org/urn:lsid:zoobank.org:pub:6E25D4D4-00EF-4D37-B701-8509FBD645DD Revision of the genus Exsuperantia Özdikmen, 2009 (Tetractinellida: Phymaraphiniidae) with description of a new species from the Atlantic Ocean FRANCISCA C. CARVALHO1 & ANDRZEJ PISERA2 1Department of Biological Sciences and K.G. Jebsen Centre for Deep-Sea Research, University of Bergen, PO Box 7803, N-5020 Ber- gen, Norway. E-mail: [email protected] 2Institute of Paleobiology, Polish Academy of Sciences, ul. Twarda 51/55, 00-818 Warszawa, Poland. E-mail: [email protected] Abstract Phymaraphiniidae Schrammen 1924 (Porifera: Astrophorina) is a family of lithistid demosponges that has received little attention in the past decades. The systematic problems within this family have not been addressed for a long time due to the absence of new records and material. The genus Exsuperantia Özdikmen 2009 was first described by Schmidt (1879) as Rimella to allocate the species Rimella clava, found in the Caribbean. In 1892, Topsent found what he thought to be the same species described by Schmidt in the Azores, and synonymized it with Racodiscula clava, as he thought this species belonged to the family Theonellidae Lendenfeld 1903. However, Rimella and Racodiscula belong to distinct families: Rimella to Phymaraphiniidae, and Racodiscula to Theonellidae. Due to the fact that the genus Rimella was already preoccupied by a gastropod, it was renamed as Exsuperantia. -
Porifera, Demospongiaep) Reveals an Unexpected High Level of Spicule Homoplasy
Molecular Phylogeny of the Astrophorida (Porifera, Demospongiaep) Reveals an Unexpected High Level of Spicule Homoplasy Paco Ca´rdenas1*¤, Joana R. Xavier2,3, Julie Reveillaud4,5, Christoffer Schander1,6, Hans Tore Rapp1,6 1 Department of Biology, University of Bergen, Bergen, Norway, 2 CIBIO – Research Centre for Biodiversity and Genetic Resources, CIBIO-Azores, Biology Department, University of the Azores, Azores, Portugal, 3 CEAB – Center for Advanced Studies of Blanes (CSIC), Blanes, Spain, 4 Marine Biology Section, Biology Department, Ghent University, Ghent, Belgium, 5 CeMoFE, Center for Molecular Phylogeny and Evolution, Ghent, Belgium, 6 Centre for Geobiology, University of Bergen, Bergen, Norway Abstract Background: The Astrophorida (Porifera, Demospongiaep) is geographically and bathymetrically widely distributed. Systema Porifera currently includes five families in this order: Ancorinidae, Calthropellidae, Geodiidae, Pachastrellidae and Thrombidae. To date, molecular phylogenetic studies including Astrophorida species are scarce and offer limited sampling. Phylogenetic relationships within this order are therefore for the most part unknown and hypotheses based on morphology largely untested. Astrophorida taxa have very diverse spicule sets that make them a model of choice to investigate spicule evolution. Methodology/Principal Findings: With a sampling of 153 specimens (9 families, 29 genera, 89 species) covering the deep- and shallow-waters worldwide, this work presents the first comprehensive molecular phylogeny of the Astrophorida, -
10Th World Sponge Conference
10th World Sponge Conference NUI Galway 25-30 June 2017 Cover photographs - Bernard Picton. South Africa, 2008. Cover photographs - Bernard Picton. South CAMPUS MAP Áras na Mac Léinn and Bailey Allen Hall 1 The Quadrangle Accessible Route Across Campus (for the mobility 2 Áras na Gaeilge impaired) To Galway City 3 The Hardiman Building IT Building 4 Arts Millennium Building Cafés, restaurants and bars 5 Sports Centre A An Bhialann Cathedral 6 Arts / Science Building B Smokey Joe’s Café D 7 IT Building Martin Ryan Building C 8 10 8 Orbsen Building River D 9 9 Student Information Desk College Bar 7 12 Corrib (SID) / Áras Uí Chathail E Zinc Café C 10 Áras na Mac Léinn F 11 and Bailey Allen Hall Friars Restaurant Arts / Science Building 11 Human Biology Building 13 (under construction) Q Engineering Building U D I 12 Bank of Ireland Theatre N River A C O E R Corrib N 13 Martin Ryan Building 10th WSC Y T T I E B S N 14 Áras Moyola R N 2 E I V A I N 15 J.E. Cairnes School of L 6 U B A 3 Business and Economics R I D 16 Corrib Village Áras Moyola G E University Road (Student Accommodation) Entrance 17 Institute of Lifecourse and Society 18 Park and Ride 1 D 4 I S 19 Engineering Building T I LL E R 5 Y R O A NEWCA Under Construction D STL E ROAD Please excuse our temporary appearance. The Hardiman Building Institute of Lifecourse and Society 19 AD E O R LE ST 14 CA EW N Arts Millennium Building Newcastle Road 15 Entrance 16 F P&R 18 17 J.E.