DNA Polymorphism, Haplotype Structure and Balancing Selection in the Leavenworthia Pgic Locus
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Chilling Consequences: Herbarium Records Reveal Earlier Reproductive Phenology of Winter Annual Gladecress in a Wetter, Cooler Climate
Received: 14 August 2019 | Revised: 6 November 2019 | Accepted: 28 November 2019 DOI: 10.1002/ppp3.10095 RESEARCH ARTICLE Chilling consequences: Herbarium records reveal earlier reproductive phenology of winter annual gladecress in a wetter, cooler climate Caitlin Banaszak1 | Joshua B. Grinath1,2 | Christopher R. Herlihy1 1Department of Biology, Middle Tennessee State University, Murfreesboro, TN, USA Societal Impact Statement 2Department of Biological Sciences, Idaho Networks of digitized herbarium records are rich resources for understanding plant State University, Pocatello, ID, USA responses to climate change. While the climate is warming globally, some localities Correspondence are experiencing climate cooling, the effects of which are poorly understood. Our Joshua B. Grinath, Department of Biological herbarium-based study of a geographically restricted species shows that the timing Sciences, Idaho State University, 921 S 8th Ave, Mail Stop 8007, Pocatello, ID 83209, of reproduction can shift earlier as the climate becomes cooler and wetter. Local USA. variation in climate change may be a key factor driving the high variability of changes Email: [email protected] observed in plant reproduction and climate cooling should be considered along with Christopher R. Herlihy, Department of Biology, Middle Tennessee State University, other global change drivers. This will help enable accurate predictions for the suc- P.O. Box 60, Murfreesboro, TN 37132, USA. cessful management of climate change effects. Email: [email protected] Summary Funding information • Plant phenological responses to global warming are well studied. However, while NSF, Grant/Award Number: 1119176 many locations are experiencing increased temperatures, some locations are ex- periencing climate cooling. Little work has been conducted to understand plant phenological responses to cooling trends, much less the combined effects of cooling and other factors, such as changing precipitation. -
Kimberly Norton Taylor1 and Dwayne Estes
The floristic and community ecology of seasonally wet limestone glade seeps of Tennessee and Kentucky Kimberly Norton Taylor1 and Dwayne Estes Austin Peay State University Department of Biology and Center of Excellence for Field Biology Clarksville, Tennessee 37044, U.S.A. [email protected], [email protected] ABSTRACT An open, seasonally wet seep community supporting herbaceous vegetation occurs within the limestone cedar glade complex of the southeastern United States. The purpose of this study is to describe the floristic composition of these limestone glade seeps. A floristic inventory of 9 season- ally wet sites in central Tennessee and south-central Kentucky was performed, documenting 114 species and infraspecific taxa in 91 genera and 43 families. Vegetation analysis identified the dominant taxa as Eleocharis bifida (% IV 20.3), Sporobolus vaginiflorus (% IV 11.94), Hypericum sphaerocarpum (% IV 5.97), Allium aff. stellatum (% IV 4.71), Clinopodium glabellum/arkansanum (% IV 4.15), Schoenolirion croceum (% IV 3.89), Juncus filipendulus (% IV 3.89), and Carex crawei (% IV 3.84). Gratiola quartermaniae and Isoëtes butleri are also important members of the community and may serve as indicator species. A wetland assessment of the seep community was performed according to the U.S. Army Corps of Engineers Wetland Delineation Manual and appropriate regional supplements. Wetland vegetation requirements are satisfied in 8 of the 9 seasonally wet sites sampled. The limestone glade seeps appear to represent a previously unclassified seasonal wetland type. RESUMEN Una comunidad abierta, húmeda estacionalmente por filtración, compuesta por vegetación herbácea se da en el complejo de pantanos cal- cáreos de cedro del sureste de los Estados Unidos. -
USFWS Consultation on Transmission System Right-Of-Way Program
United States Department of the Interior FISH AND WILDLIFE SERVICE Tennessee ES Office 446 Neal Street Cookeville, Tennessee 38501 December 18, 2018 Mr. John T. Baxter Manager, Biological Compliance Tennessee Valley Authority 400 West Summit Hill Drive Knoxville, TN 37902 Re: FWS #2018-F-0958; Programmatic Consultation for Right-of-Way Vegetation Management that May Affect Endangered or Threatened Plants in the Tennessee Valley Authority Service Area Dear Mr. Baxter: This letter acknowledges the U.S. Fish and Wildlife Service’s (Service) November 21, 2018, receipt of your November 19, 2015, letter requesting initiation of formal section 7 consultation under the Endangered Species Act (Act). The consultation concerns the possible effects of your proposed Programmatic Strategy for Right-of-Way Vegetation Management that May Affect Endangered or Threatened Plants in the Tennessee Valley Authority Service Area (TVA) (the Proposed Action) on 18 federally listed plants, including: • Price's potato-bean (Apios priceana) • Braun's rock-cress (Arabis perstellata) • Pyne's ground plum (Astragalus bibullatus) • Morefield's leather-flower (Clematis morefieldii) • Alabama leather flower (Clematis socialis) • leafy prairie-clover (Dalea foliosa) • whorled sunflower (Helianthus verticillatus) • small whorled pogonia (Isotria medeoloides) • fleshy-fruit gladecress (Leavenworthia crassa) • lyre-leaf bladderpod (Lesquerella lyrata) • Spring Creek bladderpod (Lesquerella perforata) • Mohr's Barbara's buttons (Marshallia mohrii) • Cumberland sandwort (Minuartia cumberlandensis) • Short’s bladderpod (Physaria globosa) • white fringeless orchid (Platanthera integrilabia) • green pitcher plant (Sarracenia oreophila) • large-flowered skullcap (Scutellaria montana) • Tennessee yellow-eyed grass (Xyris tennesseensis) Listed species (LE=listed as endangered; LT=listed as threatened) and designated critical habitats (DCH) that TVA has determined the proposed Action is not likely to adversely affect (NLAA). -
Vascular Plant Community Classification for Stones River National Battlefield
VASCULAR PLANT COMMUNITY CLASSIFICATION FOR STONES RIVER NATIONAL BATTLEFIELD Report for the Vertebrate and Vascular Plant Inventories: Appalachian Highlands and Cumberland/Piedmont Network Prepared by NatureServe for the National Park Service Southeast Regional Office October 2004 NatureServe is a non-profit organization providing the scientific knowledge that forms the basis for effective conservation action. A NatureServe Technical Report Prepared for the National Park Service under Cooperative Agreement H 5028 01 0435. Citation: Nordman, Carl. 2004. Vascular Plant Community Classification for Stones River National Battlefield. Durham, North Carolina: NatureServe. © 2004 NatureServe NatureServe 6114 Fayetteville Road, Suite 109 Durham, NC 27713 919-484-7857 International Headquarters 1101 Wilson Boulevard, 15th Floor Arlington, Virginia 22209 www.natureserve.org National Park Service Southeast Regional Office Atlanta Federal Center 1924 Building 100 Alabama Street, S.W. Atlanta, GA 30303 The view and conclusions contained in this document are those of the authors and should not be interpreted as representing the opinions or policies of the U.S. Government. Mention of trade names or commercial products does not constitute their endorsement by the U.S. Government. This report consists of the main report along with a series of appendices with information about the plants and plant communities found at the site. Electronic files have been provided to the National Park Service in addition to hard copies. Current information on all communities described here can be found on NatureServe Explorer at www.natureserve.org/explorer. Cover photo: STRI plot 13, the Slaughter Pen. Photo by Carl Nordman. ii Acknowledgments I wish to thank all park employees, co-workers, volunteers, and academics who helped with aspects of the preparation, fieldwork, specimen identification, and report writing for this project. -
II Joint Congress on Evolutionary Biology Montpellier 2018, France August 18-22, 2018
II Joint Congress on Evolutionary Biology Montpellier 2018, France August 18-22, 2018 Congress book TABLE OF CONTENTS Welcome ................................................................................................................... 04 In memoriam ............................................................................................................ 05 Information ............................................................................................................... 06 Conference information .................................................................................. 06 Congress area map ........................................................................................ 09 City map .......................................................................................................... 10 Corum maps .................................................................................................... 12 Plenary talks ..................................................................................................... 14 Other special events sponsored by societies ................................................ 15 Workshops ........................................................................................................ 20 Other meetings ................................................................................................ 23 Social events .................................................................................................... 24 Outreach ......................................................................................................... -
The Vascular Flora of the Natchez Trace Parkway
THE VASCULAR FLORA OF THE NATCHEZ TRACE PARKWAY (Franklin, Tennessee to Natchez, Mississippi) Results of a Floristic Inventory August 2004 - August 2006 © Dale A. Kruse, 2007 © Dale A. Kruse 2007 DATE SUBMITTED 28 February 2008 PRINCIPLE INVESTIGATORS Stephan L. Hatch Dale A. Kruse S. M. Tracy Herbarium (TAES), Texas A & M University 2138 TAMU, College Station, Texas 77843-2138 SUBMITTED TO Gulf Coast Inventory and Monitoring Network Lafayette, Louisiana CONTRACT NUMBER J2115040013 EXECUTIVE SUMMARY The “Natchez Trace” has played an important role in transportation, trade, and communication in the region since pre-historic times. As the development and use of steamboats along the Mississippi River increased, travel on the Trace diminished and the route began to be reclaimed by nature. A renewed interest in the Trace began during, and following, the Great Depression. In the early 1930’s, then Mississippi congressman T. J. Busby promoted interest in the Trace from a historical perspective and also as an opportunity for employment in the area. Legislation was introduced by Busby to conduct a survey of the Trace and in 1936 actual construction of the modern roadway began. Development of the present Natchez Trace Parkway (NATR) which follows portions of the original route has continued since that time. The last segment of the NATR was completed in 2005. The federal lands that comprise the modern route total about 52,000 acres in 25 counties through the states of Alabama, Mississippi, and Tennessee. The route, about 445 miles long, is a manicured parkway with numerous associated rest stops, parks, and monuments. Current land use along the NATR includes upland forest, mesic prairie, wetland prairie, forested wetlands, interspersed with numerous small agricultural croplands. -
Assessing the Relationship Between Flowering Time and Fitness in Leavenworthia Stylosa
ASSESSING THE RELATIONSHIP BETWEEN FLOWERING TIME AND FITNESS IN LEAVENWORTHIA STYLOSA by Caitlin Banaszak A Thesis Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science in Biology Middle Tennessee State University May 2018 Thesis Committee: Dr. Christopher Herlihy, Chair Dr. Ashley Morris Dr. Jeffrey Walck ABSTRACT Recent research has shown a trend towards early flowering time in a variety of species around the world. Leavenworthia stylosa, a cedar glade species endemic to the Central Basin of Tennessee, appeared to also follow this pattern. Herbarium specimens showed a trend towards earlier flowering in L. stylosa over the last century. In two years of research, there was no overall fitness cost or benefit to flowering earlier than the population average within years, but there was a fitness cost for individuals that flowered later than average. Between years, higher fruit set was found during a year with unusually early flowering compared to a year with more typical flowering time. Based on analyses of historical climate data, earlier flowering did not appear to be due to warmer spring temperatures. Early flowering was also not the result of earlier fall germination time. ii TABLE OF CONTENTS List of Tables …….…….………………………………………………………………..v List of Figures ….……………………………………………………………………….vi Introduction ………..….…………………………………………………………………1 Methods ………….…………………………………………………………..………...10 Historical Variation in Flowering Time and Climate …………………...….10 Costs and Benefits of Early Flowering ………………………………….….12 -
CHJV Glades Assessment
Central Hardwoods Joint Venture Glade Conservation Assessment For the Interior Highlands and Interior Low Plateaus Of the Central Hardwoods Region Lead Authors: Paul Nelson, Mark Twain National Forest (retired) Jane A. Fitzgerald, American Bird Conservancy and Central Hardwoods Joint Venture Contributing Authors: Kirk Larson, Hoosier National Forest Roger McCoy, Tennessee Department of Environment and Conservation Al Schotz, Auburn University Theo Witsell, Arkansas Natural Heritage Commission Brian Yahn, Kentucky State Nature Preserves John Taft, University of Illinois Other Contributors: Martin Blaney, A.J. Riggs, Ray Wiggs (Arkansas Game and Fish Commission) Mike Homoya (Indiana Department of Natural Resources Theresa Davidson, Mike Shanta (Mark Twain National Forest) Doug Ladd (Missouri Chapter of The Nature Conservancy) Mike Leahy (Missouri Department of Conservation) Allison Vaughn (Missouri Department of Natural Resources) Mary Lane, Susan Hooks (Ouachita National Forest) William Carromero (Ozark-St. Francis National Forest) Amy Buthod, Bruce Hoagland (University of Oklahoma) Becky Ewing, Mary Maj (U.S.D.A. Forest Service, Region 9) 2 Andy Radomski, Brent Harrel (U.S. Fish and Wildlife Service) Keith S. Summerville (Drake University) Suggested Citation: Nelson, P. W., J. A. Fitzgerald, K. Larson, R. McCoy, A. Schotz, J. Taft, T. Witsell, B. Yahn. 2013. Central Hardwoods Joint Venture Glade Conservation Assessment for the Interior Highlands and Interior Low Plateaus of the Central Hardwoods Region. Central Hardwoods Joint Venture. http://www.chjv.org/projects.html. Acknowledgements: The lead authors thank all who contributed time and expertise to this assessment. We also are very grateful to the U.S.D.A. Forest Service for their financial support and encouragement of the partnership approach to the development of this document. -
In Silico Characterization and Evolution Studies of Alcohol Dehydrogenase Gene from Phoenix Dactylifera L.Cv Deglet Nour
Vol. 14(20), pp. 1686-1695, 20 May, 2015 DOI: 10.5897/AJB2015.14586 Article Number: 01CC77752948 ISSN 1684-5315 African Journal of Biotechnology Copyright © 2015 Author(s) retain the copyright of this article http://www.academicjournals.org/AJB Full Length Research Paper In silico characterization and evolution studies of alcohol dehydrogenase gene from Phoenix dactylifera L.cv Deglet Nour Imen Rekik1*, Amine Elleuch1, Noureddine Drira1 and Foued Cheour2 1Laboratory of plant biotechnology, Faculty of sciences of Sfax, University of Sfax, Tunisia. 2High Institute of Applied Biology of Medenine, Tunisia. Received 21 March, 2015; Accepted 15 May, 2015 The aim of our study was to isolate the alcohol dehydrogenase (ADH) mRNA from Phoenix dactifera, and examine the molecular evolutionary history of this nuclear gene with others ADH genes from palms and other plants species. The DnADH gene has been isolated in silico by BLAST2GO from a cDNA library of date palm cv Deglet Nour. The prediction of candidate’s mRNA and protein for ADH gene from khalas were performed in silico from whole genome shotgun sequence (ACYX02009373.1) using FGENESH prediction program. Nucleotide polymorphism using DnaSPv5 was examined in four palm ADH mRNA sequences across the entire 1.098 kb length of ADH mRNA. A primary conclusion of the present study is that nucleotide diversity for ADH between palm species is very low. In order to assess selective pressure, we calculated the ratio of non-synonymous to synonymous substitutions. We conclude that ADH palms genes appear to be under very different selective constraints. Phylogenetic analyses using PHYLIP and Notung 2.8 programs suggest that ADH genes of some plants species resulted from relatively ancient duplication events. -
Biotechnology Volume 14 Number 20, 20 May, 2015 ISSN 1684-5315
African Journal of Biotechnology Volume 14 Number 20, 20 May, 2015 ISSN 1684-5315 ABOUT AJB The African Journal of Biotechnology (AJB) (ISSN 1684-5315) is published weekly (one volume per year) by Academic Journals. African Journal of Biotechnology (AJB), a new broad-based journal, is an open access journal that was founded on two key tenets: To publish the most exciting research in all areas of applied biochemistry, industrial microbiology, molecular biology, genomics and proteomics, food and agricultural technologies, and metabolic engineering. Secondly, to provide the most rapid turn-around time possible for reviewing and publishing, and to disseminate the articles freely for teaching and reference purposes. All articles published in AJB are peer- reviewed. Submission of Manuscript Please read the Instructions for Authors before submitting your manuscript. The manuscript files should be given the last name of the first author Click here to Submit manuscripts online If you have any difficulty using the online submission system, kindly submit via this email [email protected]. With questions or concerns, please contact the Editorial Office at [email protected]. Editor-In-Chief Associate Editors George Nkem Ude, Ph.D Prof. Dr. AE Aboulata Plant Breeder & Molecular Biologist Plant Path. Res. Inst., ARC, POBox 12619, Giza, Egypt Department of Natural Sciences 30 D, El-Karama St., Alf Maskan, P.O. Box 1567, Crawford Building, Rm 003A Ain Shams, Cairo, Bowie State University Egypt 14000 Jericho Park Road Bowie, MD 20715, USA Dr. S.K Das Department of Applied Chemistry and Biotechnology, University of Fukui, Japan Editor Prof. Okoh, A. I. N. -
The Evolution and Breakdown of Self-Incompatibility in Leavenworthia: Insights from the S-Locus
The evolution and breakdown of self-incompatibility in Leavenworthia: insights from the S-locus Adam C. Herman Department of Biology McGill University, Montréal, Quebec, Canada July 2015 A thesis submitted to McGill University in partial fulfillment of the requirements of the degree of Doctor of Philosophy © Adam Herman, 2015 DEDICATION To Otis and Louis Herman What you’ll find in here is some of what I did when you guys were little. Crazy, huh? I love you both so much. Call your mother and me. 2 TABLE OF CONTENTS DEDICATION ................................................................................................................................ 2 TABLE OF CONTENTS ................................................................................................................ 3 LIST OF TABLES .......................................................................................................................... 5 LIST OF FIGURES ........................................................................................................................ 6 PREFACE ....................................................................................................................................... 8 Thesis format ............................................................................................................................................ 8 Contributions of authors ........................................................................................................................... 9 Statement of originality ......................................................................................................................... -
Vascular Flora and Gradient Analysis of the Natchez
VASCULAR FLORA AND GRADIENT ANALYSIS OF THE NATCHEZ TRACE PARKWAY A Thesis by NENA MAE MONIQUE PHILLIPS Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE August 2006 Major Subject: Rangeland Ecology and Management VASCULAR FLORA AND GRADIENT ANALYSIS OF THE NATCHEZ TRACE PARKWAY A Thesis by NENA MAE MONIQUE PHILLIPS Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Approved by: Chair of Committee, Stephan L. Hatch Committee Members, David Cairns Stephen Davis III Head of Department, Steven Whisenant August 2006 Major Subject: Rangeland Ecology and Management iii ABSTRACT Vascular Flora and Gradient Analysis of the Natchez Trace Parkway. (August 2006) Nena Mae Monique Phillips, B.S., Texas A&M University Chair of Advisory Committee: Dr. Stephan L. Hatch Vascular plant collections were made on the Natchez Trace Parkway over a 15 month period beginning in August 2004. These collections along with previous work done by the National Park Service (NPS) produced a flora of 750 genera and 2196 species in 167 families. Five collection trips were made so as to include as much of the growing season as possible (August 2004, March, May, July and October 2005). Specimens were collected from 500 sites along the Parkway as well as at 50 quadrat locations. The largest families, by species numbers, are Asteraceae (298 species), Poaceae (236 species), Cyperaceae (148 species), Fabaceae (133 species) and Rosaceae (73 species), which accounted for 40.4% of the flora.