Sending and Receiving Hedgehog Signals
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Loss of the PTCH1 Tumor Suppressor Defines a New
Banerjee et al. J Transl Med (2019) 17:246 https://doi.org/10.1186/s12967-019-1995-z Journal of Translational Medicine RESEARCH Open Access Loss of the PTCH1 tumor suppressor defnes a new subset of plexiform fbromyxoma Sudeep Banerjee1,2, Christopher L. Corless3, Markku M. Miettinen4, Sangkyu Noh1, Rowan Ustoy1, Jessica L. Davis3, Chih‑Min Tang1, Mayra Yebra1, Adam M. Burgoyne5 and Jason K. Sicklick1* Abstract Background: Plexiform fbromyxoma (PF) is a rare gastric tumor often confused with gastrointestinal stromal tumor. These so‑called “benign” tumors often present with upper GI bleeding and gastric outlet obstruction. It was recently demonstrated that approximately one‑third of PF have activation of the GLI1 oncogene, a transcription factor in the hedgehog (Hh) pathway, via a MALAT1‑GLI1 fusion protein or GLI1 up‑regulation. Despite this discovery, the biology of most PFs remains unknown. Methods: Next generation sequencing (NGS) was performed on formalin‑fxed parafn‑embedded (FFPE) samples of PF specimens collected from three institutions (UCSD, NCI and OHSU). Fresh frozen tissue from one tumor was utilized for in vitro assays, including quantitative RT‑PCR and cell viability assays following drug treatment. Results: Eight patients with PF were identifed and 5 patients’ tumors were analyzed by NGS. An index case had a mono‑allelic PTCH1 deletion of exons 15–24 and a second case, identifed in a validation cohort, also had a PTCH1 gene loss associated with a suspected long‑range chromosome 9 deletion. Building on the role of Hh signaling in PF, PTCH1, a tumor suppressor protein, functions upstream of GLI1. Loss of PTCH1 induces GLI1 activation and down‑ stream gene transcription. -
Material and Method
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Spiral - Imperial College Digital Repository Attenuation of Hedgehog acyltransferase-catalyzed Sonic hedgehog palmitoylation causes reduced signaling, proliferation and invasiveness of human carcinoma cells Shu-Chun Chang 1, #, Antonio D Konitsiotis 1, Biljana Jovanović 1, *, Paulina Ciepla 2, 3, Naoko Masumoto 2, 3, Christopher P. Palmer 4, Edward W. Tate 2, 3, John R. Couchman 5 and Anthony I. Magee 1, 3 1 Molecular Medicine Section, National Heart & Lung Institute Imperial College London, Sir Alexander Fleming Building, South Kensington London SW7 2AZ, UK 2 Department of Chemistry, Imperial College London, South Kensington London SW7 2AZ, UK 3 Institute of Chemical Biology, Imperial College London 4 Institute for Health Research and Policy, London Metropolitan University London N7 8DB, UK 5 Department of Biomedical Sciences, University of Copenhagen, Biocenter, Ole Maaløes Vej 5, 2200 Copenhagen N, Denmark # Current address: Department of Biological Sciences, National University of Singapore 14 Science Drive 4, S1A-05-11, Singapore 117543 * Current address: Department of Biosciences and Nutrition, Karolinska Institutet SE-141 57 Huddinge, Sweden Running title: Carcinoma dependence on Hhat Key words: sonic hedgehog; Hedgehog acyltransferase; MBOAT; carcinoma; pancreatic; lung Corresponding author: Anthony I. Magee, Molecular Medicine Section, National Heart & Lung Institute Imperial College London, South Kensington Campus, London SW7 2AZ, UK. Tel: +44 (0)20 7594 3135 E-mail: [email protected] Abbreviations: PDAC, pancreatic ductal adenocarcinoma; NSCLC, non-small cell lung cancer; Shh, Sonic hedgehog; Hhat, Hedgehog acyltransferase; KD, knockdown; siRNA, small interfering RNA; CFSE, 5(6)-Carboxyfluorescein diacetate N-succinimidyl ester; ALP, alkaline phosphatase 1 ABSTRACT Overexpression of Hedgehog family proteins contributes to the aetiology of many cancers. -
The Role of Gli3 in Inflammation
University of New Hampshire University of New Hampshire Scholars' Repository Doctoral Dissertations Student Scholarship Winter 2020 THE ROLE OF GLI3 IN INFLAMMATION Stephan Josef Matissek University of New Hampshire, Durham Follow this and additional works at: https://scholars.unh.edu/dissertation Recommended Citation Matissek, Stephan Josef, "THE ROLE OF GLI3 IN INFLAMMATION" (2020). Doctoral Dissertations. 2552. https://scholars.unh.edu/dissertation/2552 This Dissertation is brought to you for free and open access by the Student Scholarship at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. THE ROLE OF GLI3 IN INFLAMMATION BY STEPHAN JOSEF MATISSEK B.S. in Pharmaceutical Biotechnology, Biberach University of Applied Sciences, Germany, 2014 DISSERTATION Submitted to the University of New Hampshire in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy In Biochemistry December 2020 This dissertation was examined and approved in partial fulfillment of the requirement for the degree of Doctor of Philosophy in Biochemistry by: Dissertation Director, Sherine F. Elsawa, Associate Professor Linda S. Yasui, Associate Professor, Northern Illinois University Paul Tsang, Professor Xuanmao Chen, Assistant Professor Don Wojchowski, Professor On October 14th, 2020 ii ACKNOWLEDGEMENTS First, I want to express my absolute gratitude to my advisor Dr. Sherine Elsawa. Without her help, incredible scientific knowledge and amazing guidance I would not have been able to achieve what I did. It was her encouragement and believe in me that made me overcome any scientific struggles and strengthened my self-esteem as a human being and as a scientist. -
January - April 2020 Program Brochure
JANUARY - APRIL 2020 PROGRAM BROCHURE EXPLORE THE OCEAN ABOARD A MOBILE VIRTUAL Town Hall SUBMARINE (GRADES 4-8) & (GRADES 9-12) 10 Central Street DETAILS INSIDE BROCHURE! Manchester MA 01944 Office Number: 978.526.2019 Fax Number: 978.526.2007 www.mbtsrec.com Director: Cheryl Marshall Program Director: Heather DePriest FEEDBACK How are we doing? If you have any comments, concerns or suggestions that might be helpful to us, please let us know! Call us at 978-526-2019 or email the Parks & Recreation Director, Cheryl Marshall at [email protected] MISSION: Manchester Parks & Recreation strives to offer programs and services that help to enhance quality of life through parks and exceptional recreation experiences. We provide opportunities for all residents to live, grow and develop into healthy, contributing members of our community. Whatever your age, ability or interest we have something for you! REGISTRATION INFORMATION HOWHOW TOTO REGISTERREGISTER FORFOR OUROUR PROGRAMS:PROGRAMS: Online: www.mbts.com You will need a username and password in order to utilize the online program registration system. Online registration is live. Walk in: Manchester by-the-Sea Recreation Town Hall 10 Central St Manchester. Payments can be made by check, credit card or cash. All payments are due at time of registration. Mail in: Manchester by-the-Sea Recreation Town Hall 10 Central St Manchester, MA 01944. A completed program waiver must be sent in along with full payment. Please do not send cash. Checks should be made out to Town of Manchester. If paying with a check, please indicate the program registering for in the memo & amounts. -
A Battle Royale
A Battle Royale In a previous article I looked at a game between 23... d7 two legendary Hoosier players and the theme XABCDEFGHY centered upon a far advanced pawn. Should 8-+r+-+k+( one attack, or try to queen the pawn? 7zpp+rwQpzpp' Here we will revisit this theme as it often comes 6-+-zP-+-+& into play. The question revolves about how 5+-+-sn-+-% much can you sacrifice in order to get that pawn to the promised land. 4-+-+Nwq-+$ 3+-+-+-+P# Before we get to the game, let me give you an exercise: [See the diagram at right.] 2PzP-+-zP-+" 1+K+RtR-+-! Your queen has just been attacked. Give yourself 15 minutes and decide upon what best xabcdefghy play might be, and how would you play? [What pair of Hoosiers have played the most games against each other? I would venture to say that two legendary players from Kokomo; John Roush and Phil Meyers would be my guess. I'd say they have probably crossed swords over the board more than a thousand times! (Especially when you include their marathon blitz sessions!) I witnessed their most recent battle royale at the recent Super Tornado organized by Nate Bush in Indianapolis at the Delta Hotel. But I'm also sure that by the time you are reading this that they will already have played many more games at the Kokomo IHOP in their ongoing journey across the chessboard. This encounter was played at a very fast time control [g45+5], but that might have seemed slow to these battle tested veterans. -
Hedgehog Interacting Protein (HHIP) Represses Airway Remodeling And
www.nature.com/scientificreports OPEN Hedgehog interacting protein (HHIP) represses airway remodeling and metabolic reprogramming in COPD‑derived airway smooth muscle cells Yan Li1,2,7*, Li Zhang2,3, Francesca Polverino4, Feng Guo2, Yuan Hao2, Taotao Lao5, Shuang Xu2, Lijia Li2, Betty Pham2, Caroline A. Owen6 & Xiaobo Zhou2,6* Although HHIP locus has been consistently associated with the susceptibility to COPD including airway remodeling and emphysema in genome‑wide association studies, the molecular mechanism underlying this genetic association remains incompletely understood. By utilizing Hhip+/- mice and primary human airway smooth muscle cells (ASMCs), here we aim to determine whether HHIP haploinsufciency increases airway smooth muscle mass by reprogramming glucose metabolism, thus contributing to airway remodeling in COPD pathogenesis. The mRNA levels of HHIP were compared in normal and COPD‑derived ASMCs. Mitochondrial oxygen consumption rate and lactate levels in the medium were measured in COPD‑derived ASMCs with or without HHIP overexpression as readouts of glucose oxidative phosphorylation and aerobic glycolysis rates. The proliferation rate was measured in healthy and COPD‑derived ASMCs treated with or without 2‑DG. Smooth muscle mass around airways was measured by immunofuorescence staining for α‑smooth muscle actin (α‑SMA) in lung sections from Hhip+/- mice and their wild type littermates, Hhip+/+ mice. Airway remodeling was assessed in Hhip+/- and Hhip+/- mice exposed to 6 months of cigarette smoke. Our results show HHIP inhibited aerobic glycolysis and represses cell proliferation in COPD‑derived ASMCs. Notably, knockdown of HHIP in normal ASMCs increased PKM2 activity. Importantly, Hhip+/- mice demonstrated increased airway remodeling and increased intensity of α‑SMA staining around airways compared to Hhip+/+ mice. -
Highly Conserved C-Terminal Region of Indian Hedgehog N-Fragment Contributes to Its Auto-Processing and Multimer Formation
biomolecules Article Highly Conserved C-Terminal Region of Indian Hedgehog N-Fragment Contributes to Its Auto-Processing and Multimer Formation Xiaoqing Wang 1,2 , Hao Liu 3 , Yanfang Liu 2, Gefei Han 2, Yushu Wang 2 , Haifeng Chen 3,*, Lin He 2,* and Gang Ma 1,2,* 1 Bio-X-Renji Hospital Research Center, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200240, China; [email protected] 2 Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders (Ministry of Education), Bio-X Institutes, Shanghai Jiao Tong University, Shanghai 200240, China; [email protected] (Y.L.); [email protected] (G.H.); [email protected] (Y.W.) 3 State Key Laboratory of Microbial Metabolism, Department of Bioinformatics and Biostatistics, National Experimental Teaching Center for Life Sciences and Biotechnology, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; [email protected] * Correspondence: [email protected] (H.C.); [email protected] (L.H.); [email protected] (G.M.) Abstract: Hedgehog (HH) is a highly conserved secretory signalling protein family mainly involved in embryonic development, homeostasis, and tumorigenesis. HH is generally synthesised as a precursor, which subsequently undergoes autoproteolytic cleavage to generate an amino-terminal fragment (HH-N), mediating signalling, and a carboxyl-terminal fragment (HH-C), catalysing the Citation: Wang, X.; Liu, H.; Liu, Y.; auto-processing reaction. The N-terminal region of HH-N is required for HH multimer formation Han, G.; Wang, Y.; Chen, H.; He, L.; to promote signal transduction, whilst the functions of the C-terminal region of HH-N remain Ma, G. -
The Complete Hedgehog Foreword
Chess Sergey Shipov GemsThe Complete 1,000 Combinations You Should Know Hedgehog Volume I By Igor Sukhin Foreword by World Champion Vladimir Kramnik Boston © 2009 Sergey Shipov All rights reserved. No part of this book may be reproduced or transmitted in any form by any means, electronic or mechanical, including photocopying, recording, or by an information storage and retrieval system, without written permission from the Publisher. Publisher: Mongoose Press 1005 Boylston Street, Suite 324 Newton Highlands, MA 02461 [email protected] www.MongoosePress.com ISBN: 978-0-9791482-1-7 Library of Congress Control Number: 2009932697 Distributed to the trade by National Book Network [email protected], 800-462-6420 For all other sales inquiries please contact the publisher. Translated by: James Marfia Layout: Semko Semkov Editorial Consultant: Jorge Amador Cover Design: Creative Center – Bulgaria First English edition 0 9 8 7 6 5 4 3 2 1 Printed in China Contents Foreword 4 Introduction 5 The Hedgehog. Its Birth and Development 9 Getting to the Hedgehog Opening Structure 12 The Hedgehog Philosophy 20 Space and Order 25 Evaluating a Position 27 The English Hedgehog Preface 34 Part 1 Classical Continuation 7. d4 42 Chapter 1-1 History and Pioneers 43 Chapter 1-2 The English Hedgehog Tabiya – 7. d4 cxd4 8. Qxd4 69 Chapter 1-3 White Aims for a Quick Attack on the Pawn at d6 92 Chapter 1-4 Two Plans by Uhlmann 150 Chapter 1-5 Trading Off the Bishop at f6 214 Chapter 1-6 Notes on Move Orders in the 8. d4 System 278 Part 2 The 7. -
Fall 2008 Missouri Chess Bulletin
Missouri Chess Bulletin Missouri Chess Association www.mochess.org GM Benjamin Finegold GM Yasser Seirawan Volume 39 Number two —Summer/Fall 2012 Issue K Serving Missouri Chess Since 1973 Q TABLE OF CONTENTS ~Volume 39 Number 2 - Summer/Fall 2012~ Recent News in Missouri Chess ................................................................... Pg 3 From the Editor .................................................................................................. Pg 4 Tournament Winners ....................................................................................... Pg 5 There Goes Another Forty Years ................................................................... Pg 6-7 ~ John Skelton STLCCSC GM-in-Residence (Cover Story) ............................................... Pg 8 ~ Mike Wilmering World Chess Hall of Fame Exhibits ............................................................ Pg 9 Chess Clubs around the State ........................................................................ Pg 9 2012 Missouri Chess Festival ......................................................................... Pg 10-11 ~ Thomas Rehmeier Dog Days Open ................................................................................................. Pg 12-13 ~ Tim Nesham Top Missouri Chess Players ............................................................................ Pg 14 Chess Puzzles ..................................................................................................... Pg 15 Recent Games from Missouri Players ........................................................ -
Overschie Schaakt Februari 2016
#1 • 2016 Laat uw verzekeringen doorlichten en krijg een onafhankelijk en vrijblijvend advies [email protected] Prins Mauritssingel 76c - 3043 PJ Rotterdam T 010 - 262 25 59 - M 06 -2757 0696 Overschie Schaakt februari 2016 Inhoud Verenigingsinformatie ________________________ 2 Algemeen ___________________________________ 2 3 Bestuur _____________________________________ 2 Wist u dat …? Trainers ____________________________________ 2 Deze keer in ‘Wist u dat …?’ Clubblad ____________________________________ 2 Website ____________________________________ 2 één van de beste schakers Contributie __________________________________ 2 aller tijden: Anatoli Karpov. Opzegging van het Lidmaatschap ________________ 2 Kortjes _____________________________________ 3 Agenda _____________________________________ 3 Schaken en Auteursrecht _______________________ 3 Actiefoto ____________________________________ 3 Wist u dat Anatoli Karpov …? ___________________ 3 Rectificatie __________________________________ 3 Overschie 1 _________________________________ 4 9 Bespiegelingen _______________________________ 4 Ronde 3, Souburg (uit) _________________________ 4 Overschie 2 Statistieken na Ronde 3 ________________________ 6 De strijd in RSB klasse 1A is Ronde 4, Charlois Europoort (thuis) _______________ 6 nog in volle gang. Ook voor Statistieken na Ronde 4 ________________________ 7 ons tweede team is het nog Ronde 5, CSV (uit) ____________________________ 8 spannend. De degradatielijn Statistieken na Ronde 5 ________________________ 9 -
A Proposed Heuristic for a Computer Chess Program
A Proposed Heuristic for a Computer Chess Program copyright (c) 2013 John L. Jerz [email protected] Fairfax, Virginia Independent Scholar MS Systems Engineering, Virginia Tech, 2000 MS Electrical Engineering, Virginia Tech, 1995 BS Electrical Engineering, Virginia Tech, 1988 December 31, 2013 Abstract How might we manage the attention of a computer chess program in order to play a stronger positional game of chess? A new heuristic is proposed, based in part on the Weick organizing model. We evaluate the 'health' of a game position from a Systems perspective, using a dynamic model of the interaction of the pieces. The identification and management of stressors and the construction of resilient positions allow effective postponements for less-promising game continuations due to the perceived presence of adaptive capacity and sustainable development. We calculate and maintain a database of potential mobility for each chess piece 3 moves into the future, for each position we evaluate. We determine the likely restrictions placed on the future mobility of the pieces based on the attack paths of the lower-valued enemy pieces. Knowledge is derived from Foucault's and Znosko-Borovsky's conceptions of dynamic power relations. We develop coherent strategic scenarios based on guidance obtained from the vital Vickers/Bossel/Max- Neef diagnostic indicators. Archer's pragmatic 'internal conversation' provides the mechanism for our artificially intelligent thought process. Initial but incomplete results are presented. keywords: complexity, chess, game -
Participation of HHIP Gene Variants in COPD Susceptibility, Lung Function, and Serum and Sputum Protein Levels in Women Exposed to Biomass-Burning Smoke
diagnostics Article Participation of HHIP Gene Variants in COPD Susceptibility, Lung Function, and Serum and Sputum Protein Levels in Women Exposed to Biomass-Burning Smoke Alejandro Ortega-Martínez 1,2 , Gloria Pérez-Rubio 1 , Alejandra Ramírez-Venegas 3, María Elena Ramírez-Díaz 4, Filiberto Cruz-Vicente 5, María de Lourdes Martínez-Gómez 6, Espiridión Ramos-Martínez 7 , Edgar Abarca-Rojano 2,* and Ramcés Falfán-Valencia 1,* 1 HLA Laboratory, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, Mexico City 14080, Mexico; [email protected] (A.O.-M.); [email protected] (G.P.-R.) 2 Sección de Estudios de Posgrado e Investigación. Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Díaz Mirón s/n, Casco de Santo Tomas, Mexico City 11340, Mexico 3 Tobacco Smoking and COPD Research Department, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, Mexico City 14080, Mexico; [email protected] 4 Coordinación de Vigilancia Epidemiológica, Jurisdicción 06 Sierra, Tlacolula de Matamoros Oaxaca, Servicios de Salud de Oaxaca, Oaxaca 70400, Mexico; [email protected] 5 Internal Medicine Department. Hospital Civil Aurelio Valdivieso, Servicios de Salud de Oaxaca, Oaxaca 68050, Mexico; fi[email protected] 6 Hospital Regional de Alta Especialidad de Oaxaca, Oaxaca 71256, Mexico; [email protected] 7 Experimental Medicine Research Unit, Facultad de Medicina, Universidad Nacional Autónoma de México, Mexico City 06720, Mexico; [email protected] * Correspondence: [email protected] (E.A.-R.); [email protected] (R.F.-V.); Tel.: +52-55-5729-6000 (ext. 62718) (E.A.-R.); +52-55-5487-1700 (ext. 5152) (R.F.-V.) Received: 6 August 2020; Accepted: 16 September 2020; Published: 23 September 2020 Abstract: Background: A variety of organic materials (biomass) are burned for cooking and heating purposes in poorly ventilated houses; smoke from biomass combustion is considered an environmental risk factor for chronic obstructive pulmonary disease COPD.