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Predictive QSAR Tools to Aid in Early Process Development of Monoclonal Antibodies
Predictive QSAR tools to aid in early process development of monoclonal antibodies John Micael Andreas Karlberg Published work submitted to Newcastle University for the degree of Doctor of Philosophy in the School of Engineering November 2019 Abstract Monoclonal antibodies (mAbs) have become one of the fastest growing markets for diagnostic and therapeutic treatments over the last 30 years with a global sales revenue around $89 billion reported in 2017. A popular framework widely used in pharmaceutical industries for designing manufacturing processes for mAbs is Quality by Design (QbD) due to providing a structured and systematic approach in investigation and screening process parameters that might influence the product quality. However, due to the large number of product quality attributes (CQAs) and process parameters that exist in an mAb process platform, extensive investigation is needed to characterise their impact on the product quality which makes the process development costly and time consuming. There is thus an urgent need for methods and tools that can be used for early risk-based selection of critical product properties and process factors to reduce the number of potential factors that have to be investigated, thereby aiding in speeding up the process development and reduce costs. In this study, a framework for predictive model development based on Quantitative Structure- Activity Relationship (QSAR) modelling was developed to link structural features and properties of mAbs to Hydrophobic Interaction Chromatography (HIC) retention times and expressed mAb yield from HEK cells. Model development was based on a structured approach for incremental model refinement and evaluation that aided in increasing model performance until becoming acceptable in accordance to the OECD guidelines for QSAR models. -
Classification Decisions Taken by the Harmonized System Committee from the 47Th to 60Th Sessions (2011
CLASSIFICATION DECISIONS TAKEN BY THE HARMONIZED SYSTEM COMMITTEE FROM THE 47TH TO 60TH SESSIONS (2011 - 2018) WORLD CUSTOMS ORGANIZATION Rue du Marché 30 B-1210 Brussels Belgium November 2011 Copyright © 2011 World Customs Organization. All rights reserved. Requests and inquiries concerning translation, reproduction and adaptation rights should be addressed to [email protected]. D/2011/0448/25 The following list contains the classification decisions (other than those subject to a reservation) taken by the Harmonized System Committee ( 47th Session – March 2011) on specific products, together with their related Harmonized System code numbers and, in certain cases, the classification rationale. Advice Parties seeking to import or export merchandise covered by a decision are advised to verify the implementation of the decision by the importing or exporting country, as the case may be. HS codes Classification No Product description Classification considered rationale 1. Preparation, in the form of a powder, consisting of 92 % sugar, 6 % 2106.90 GRIs 1 and 6 black currant powder, anticaking agent, citric acid and black currant flavouring, put up for retail sale in 32-gram sachets, intended to be consumed as a beverage after mixing with hot water. 2. Vanutide cridificar (INN List 100). 3002.20 3. Certain INN products. Chapters 28, 29 (See “INN List 101” at the end of this publication.) and 30 4. Certain INN products. Chapters 13, 29 (See “INN List 102” at the end of this publication.) and 30 5. Certain INN products. Chapters 28, 29, (See “INN List 103” at the end of this publication.) 30, 35 and 39 6. Re-classification of INN products. -
Looking for Therapeutic Antibodies in Next Generation Sequencing Repositories
bioRxiv preprint doi: https://doi.org/10.1101/572958; this version posted March 10, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Title: Looking for Therapeutic Antibodies in Next Generation Sequencing Repositories. Authors: Konrad Krawczyk1*, Matthew Raybould2, Aleksandr Kovaltsuk2, Charlotte M. Deane2 1 NaturalAntibody, Hamburg, Germany 2 Oxford University Department of Statistics, Oxford, UK *Correspondence to [email protected] Abstract: Recently it has become possible to query the great diversity of natural antibody repertoires using Next Generation Sequencing (NGS). These methods are capable of producing millions of sequences in a single experiment. Here we compare Clinical Stage Therapeutic antibodies to the ~1b sequences from 60 independent sequencing studies in the Observed Antibody Space Database. Of the 242 post Phase I antibodies, we find 16 with sequence identity matches of 95% or better for both heavy and light chains. There are also 54 perfect matches to therapeutic CDR-H3 regions in the NGS outputs, suggesting a nontrivial amount of convergence between naturally observed sequences and those developed artificially. This has potential implications for both the discovery of antibody therapeutics and the legal protection of commercial antibodies. Introduction Antibodies are proteins in jawed vertebrates that recognize noxious molecules (antigens) for elimination. An organism expresses millions of diverse antibodies to increase the chances that some of them will be able to bind the foreign antigen, initiating the adaptive immune response. -
The Two Tontti Tudiul Lui Hi Ha Unit
THETWO TONTTI USTUDIUL 20170267753A1 LUI HI HA UNIT ( 19) United States (12 ) Patent Application Publication (10 ) Pub. No. : US 2017 /0267753 A1 Ehrenpreis (43 ) Pub . Date : Sep . 21 , 2017 ( 54 ) COMBINATION THERAPY FOR (52 ) U .S . CI. CO - ADMINISTRATION OF MONOCLONAL CPC .. .. CO7K 16 / 241 ( 2013 .01 ) ; A61K 39 / 3955 ANTIBODIES ( 2013 .01 ) ; A61K 31 /4706 ( 2013 .01 ) ; A61K 31 / 165 ( 2013 .01 ) ; CO7K 2317 /21 (2013 . 01 ) ; (71 ) Applicant: Eli D Ehrenpreis , Skokie , IL (US ) CO7K 2317/ 24 ( 2013. 01 ) ; A61K 2039/ 505 ( 2013 .01 ) (72 ) Inventor : Eli D Ehrenpreis, Skokie , IL (US ) (57 ) ABSTRACT Disclosed are methods for enhancing the efficacy of mono (21 ) Appl. No. : 15 /605 ,212 clonal antibody therapy , which entails co - administering a therapeutic monoclonal antibody , or a functional fragment (22 ) Filed : May 25 , 2017 thereof, and an effective amount of colchicine or hydroxy chloroquine , or a combination thereof, to a patient in need Related U . S . Application Data thereof . Also disclosed are methods of prolonging or increasing the time a monoclonal antibody remains in the (63 ) Continuation - in - part of application No . 14 / 947 , 193 , circulation of a patient, which entails co - administering a filed on Nov. 20 , 2015 . therapeutic monoclonal antibody , or a functional fragment ( 60 ) Provisional application No . 62/ 082, 682 , filed on Nov . of the monoclonal antibody , and an effective amount of 21 , 2014 . colchicine or hydroxychloroquine , or a combination thereof, to a patient in need thereof, wherein the time themonoclonal antibody remains in the circulation ( e . g . , blood serum ) of the Publication Classification patient is increased relative to the same regimen of admin (51 ) Int . -
Study on Stabilization of Human Igg4 Antibodies
九州大学学術情報リポジトリ Kyushu University Institutional Repository Study on stabilization of human IgG4 antibodies 浪崎, 博史 https://doi.org/10.15017/2534401 出版情報:九州大学, 2019, 博士(創薬科学), 課程博士 バージョン: 権利関係: ヒト IgG4 抗体の安定化に関する研究 Study on stabilization of human IgG4 antibodies 2019 九州大学 大学院薬学府 臨床薬学部門 細胞生物薬学分野 浪崎 博史 1 略語表 CD; cluster of differentiation Ig; Immunoglobulin CDR; complementary determining region V; variable D; diversity J; joining RAG; recombination-activating gene RSS; recombination signal sequences TdT; terminal deoxynucleotidyl-transferase AID; activation induced cytidine deaminase BCR; B cell receptor TCR; T cell receptor Fab; fragment, antigen binding Fc; Fragment, Crystallizable VH; variable heavy CH; constant heavy VL; variable light CL; constant light CDC; complement-dependent cytotoxicity ADCC; antibody-dependent cellular cytotoxicity ADCP; antibody-dependent cellular phagocytosis NK; natural killer FcγR; Fc gamma receptor ITAM; immunoreceptor tyrosine-based activation motif 2 ITIM; immunoreceptor tyrosine-based inhibitory motif FcRn; neonatal Fc receptor PD-1; programmed cell death 1 PD-L1; programmed cell death –lignd1 VLA4; very late antigen-4 DNP; dinitrophenol ELISA; Enzyme-linked immunosorbent assay KD; dissociation constant SEC; size-exclusion chromatography DSF; differential scanning fluorimetry DSC; differential scanning calorimetry Tm; melting transition RU; resonance unit 3 目次 第一章 序論 p.5 1-1 背景 p.5 1-1-1 免疫グロブリンの種類および機能 p.5 1-1-2 免疫グロブリンの多様性獲得 p.7 1-1-3 ヒト IgG の構造および機能 p.9 1-1-4 抗体医薬の開発および承認状況 p.13 1-1-5 ヒト IgG4 の抗体医薬の研究開発状況 p.17 1-1-6 ヒト IgG サブクラスにおける安定性 p.21 1-2 引用文献 p.25 第二章 ヒト IgG4 抗体の低 pH 誘導性凝集体形成における アミノ酸改変による抑制効果に関する研究 p.30 2-1 要旨 p.30 2-2 研究背景 p.32 2-3 材料および方法 p.35 2-4 結果 p.43 2-5 考察 p.78 2-6 引用文献 p.87 謝辞 p.94 4 第一章 序論 1-1 背景 1-1-1 免疫グロブリンの種類および機能 免疫グロブリン(Immunoglobulin;Ig)は哺乳細胞に存在する B 細胞から産生される 糖タンパク質であり、外来抗原を認識して結合する機能を有する。Ig は主に血液中 および組織体液中に存在し、細菌やウイルスなどの外来抗原に結合することにより、 白血球またはマクロファージによる食作用、ならびに免疫細胞の結合による免疫作 用により生体防御に関わっている。ヒトの免疫グロブリンは、IgG, IgA, IgM, IgD お よび IgE の 5 つのクラスが存在し (Fig. -
Stembook 2018.Pdf
The use of stems in the selection of International Nonproprietary Names (INN) for pharmaceutical substances FORMER DOCUMENT NUMBER: WHO/PHARM S/NOM 15 WHO/EMP/RHT/TSN/2018.1 © World Health Organization 2018 Some rights reserved. This work is available under the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 IGO licence (CC BY-NC-SA 3.0 IGO; https://creativecommons.org/licenses/by-nc-sa/3.0/igo). Under the terms of this licence, you may copy, redistribute and adapt the work for non-commercial purposes, provided the work is appropriately cited, as indicated below. In any use of this work, there should be no suggestion that WHO endorses any specific organization, products or services. The use of the WHO logo is not permitted. If you adapt the work, then you must license your work under the same or equivalent Creative Commons licence. If you create a translation of this work, you should add the following disclaimer along with the suggested citation: “This translation was not created by the World Health Organization (WHO). WHO is not responsible for the content or accuracy of this translation. The original English edition shall be the binding and authentic edition”. Any mediation relating to disputes arising under the licence shall be conducted in accordance with the mediation rules of the World Intellectual Property Organization. Suggested citation. The use of stems in the selection of International Nonproprietary Names (INN) for pharmaceutical substances. Geneva: World Health Organization; 2018 (WHO/EMP/RHT/TSN/2018.1). Licence: CC BY-NC-SA 3.0 IGO. Cataloguing-in-Publication (CIP) data. -
NETTER, Jr., Robert, C. Et Al.; Dann, Dorf- (21) International Application
ll ( (51) International Patent Classification: (74) Agent: NETTER, Jr., Robert, C. et al.; Dann, Dorf- C07K 16/28 (2006.01) man, Herrell and Skillman, 1601 Market Street, Suite 2400, Philadelphia, PA 19103-2307 (US). (21) International Application Number: PCT/US2020/030354 (81) Designated States (unless otherwise indicated, for every kind of national protection av ailable) . AE, AG, AL, AM, (22) International Filing Date: AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, BZ, 29 April 2020 (29.04.2020) CA, CH, CL, CN, CO, CR, CU, CZ, DE, DJ, DK, DM, DO, (25) Filing Language: English DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, HN, HR, HU, ID, IL, IN, IR, IS, JO, JP, KE, KG, KH, KN, KP, (26) Publication Language: English KR, KW, KZ, LA, LC, LK, LR, LS, LU, LY, MA, MD, ME, (30) Priority Data: MG, MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, 62/840,465 30 April 2019 (30.04.2019) US OM, PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, SC, SD, SE, SG, SK, SL, ST, SV, SY, TH, TJ, TM, TN, TR, (71) Applicants: INSTITUTE FOR CANCER RESEARCH TT, TZ, UA, UG, US, UZ, VC, VN, WS, ZA, ZM, ZW. D/B/A THE RESEARCH INSTITUTE OF FOX CHASE CANCER CENTER [US/US]; 333 Cottman Av¬ (84) Designated States (unless otherwise indicated, for every enue, Philadelphia, PA 191 11-2497 (US). UNIVERSTIY kind of regional protection available) . ARIPO (BW, GH, OF KANSAS [US/US]; 245 Strong Hall, 1450 Jayhawk GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, ST, SZ, TZ, Boulevard, Lawrence, KS 66045 (US). -
Regeneron Pharmaceuticals, Inc
Regeneron Pharmaceuticals, Inc. Annual Report 2018 Form 10-K (NASDAQ:REGN) Published: February 8th, 2018 PDF generated by stocklight.com UNITED STATES SECURITIES AND EXCHANGE COMMISSION Washington, D.C. 20549 FORM 10-K (Mark One) ý ANNUAL REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934 For the fiscal year ended December 31, 2017 OR ¨ TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934 For the transition period from __________ to __________ Commission File Number: 0-19034 REGENERON PHARMACEUTICALS, INC. (Exact name of registrant as specified in its charter) New York 13-3444607 (State or other jurisdiction of incorporation or organization) (I.R.S. Employer Identification No.) 777 Old Saw Mill River Road, Tarrytown, New 10591-6707 York (Address of principal executive offices) (Zip Code) (914) 847-7000 (Registrant's telephone number, including area code) Securities registered pursuant to Section 12(b) of the Act: Title of each class Name of each exchange on which registered Common Stock - par value $.001 per share NASDAQ Global Select Market Securities registered pursuant to section 12(g) of the Act: None Indicate by check mark if the registrant is a well-known seasoned issuer, as defined in Rule 405 of the Securities Act. Yes ý No ¨ Indicate by check mark if the registrant is not required to file reports pursuant to Section 13 or 15(d) of the Act. Yes ¨ No ý I ndicate by check mark whether the registrant: (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing requirements for the past 90 days. -
Schedule 14A
UNITED STATES SECURITIES AND EXCHANGE COMMISSION Washington, D.C. 20549 SCHEDULE 14A Proxy Statement Pursuant to Section 14(a) of the Securities Exchange Act of 1934 (Amendment No. ) Filed by the Registrant x Filed by a Party other than the Registrant o Check the appropriate box: o Preliminary Proxy Statement o Confidential, for Use of the Commission Only (as permitted by Rule 14a-6(e)(2)) o Definitive Proxy Statement x Definitive Additional Materials o Soliciting Material under §240.14a-12 Regeneron Pharmaceuticals, Inc. (Name of Registrant as Specified In Its Charter) (Name of Person(s) Filing Proxy Statement, if other than the Registrant) Payment of Filing Fee (Check the appropriate box): x No fee required. o Fee computed on table below per Exchange Act Rules 14a-6(i)(1) and 0-11. (1) Title of each class of securities to which transaction applies: (2) Aggregate number of securities to which transaction applies: (3) Per unit price or other underlying value of transaction computed pursuant to Exchange Act Rule 0-11 (set forth the amount on which the filing fee is calculated and state how it was determined): (4) Proposed maximum aggregate value of transaction: (5) Total fee paid: o Fee paid previously with preliminary materials. o Check box if any part of the fee is offset as provided by Exchange Act Rule 0-11(a)(2) and identify the filing for which the offsetting fee was paid previously. Identify the previous filing by registration statement number, or the Form or Schedule and the date of its filing. (1) Amount Previously Paid: (2) Form, -
(INN) for Biological and Biotechnological Substances
WHO/EMP/RHT/TSN/2019.1 International Nonproprietary Names (INN) for biological and biotechnological substances (a review) 2019 WHO/EMP/RHT/TSN/2019.1 International Nonproprietary Names (INN) for biological and biotechnological substances (a review) 2019 International Nonproprietary Names (INN) Programme Technologies Standards and Norms (TSN) Regulation of Medicines and other Health Technologies (RHT) Essential Medicines and Health Products (EMP) International Nonproprietary Names (INN) for biological and biotechnological substances (a review) FORMER DOCUMENT NUMBER: INN Working Document 05.179 © World Health Organization 2019 All rights reserved. Publications of the World Health Organization are available on the WHO website (www.who.int) or can be purchased from WHO Press, World Health Organization, 20 Avenue Appia, 1211 Geneva 27, Switzerland (tel.: +41 22 791 3264; fax: +41 22 791 4857; e-mail: [email protected]). Requests for permission to reproduce or translate WHO publications –whether for sale or for non-commercial distribution– should be addressed to WHO Press through the WHO website (www.who.int/about/licensing/copyright_form/en/index.html). The designations employed and the presentation of the material in this publication do not imply the expression of any opinion whatsoever on the part of the World Health Organization concerning the legal status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. Dotted and dashed lines on maps represent approximate border lines for which there may not yet be full agreement. The mention of specific companies or of certain manufacturers’ products does not imply that they are endorsed or recommended by the World Health Organization in preference to others of a similar nature that are not mentioned. -
Strategies to Obtain Diverse and Specific Human Monoclonal
Transplantation Publish Ahead of Print DOI: 10.1097/TP.0000000000001702 Strategies to Obtain Diverse and Specific Human Monoclonal Antibodies from Transgenic Animals Marianne Brüggemann, PhD1, Michael J. Osborn, PhD1, Biao Ma, PhD1 and Roland Buelow, PhD2 1 Recombinant Antibody Technology Ltd. Babraham Research Campus, Cambridge CB22 3AT, UK 2 Ligand Pharmaceuticals, 3911 Sorrento Valley Boulevard, San Diego 92121, CA, USA Correspondence: Marianne Brüggemann, PhD, Recombinant Antibody Technology Ltd., Babraham Research Campus, Cambridge CB22 3AT, UK. ([email protected]). Authorship: Marianne Brüggemann: M.B. interpreted the data and wrote the review, MichaelACCEPTED Osborn: M.J.O. corrected and added details, Biao Ma: B.M. participated in critical discussions, Roland Buelow: R.B. contributed with additions and editing, 1 Copyright © Wolters Kluwer Health. Unauthorized reproduction of this article is prohibited. The authors declare no conflicts of interest. (or as below: The authors declare no funding or conflicts of interest.) The authors declare no funding or conflicts of interest. ACCEPTED 2 Copyright © Wolters Kluwer Health. Unauthorized reproduction of this article is prohibited. Abstract: Techniques to obtain large quantities of antigen-specific monoclonal antibodies, mAbs, were first established in the 1970s when Georges Köhler and César Milstein immortalized antibody-producing mouse B-lymphocytes by fusion with myeloma cells (http://www.whatisbiotechnology.org/exhibitions/milstein). Combined with the expression of human antibodies in transgenic animals, this technique allowed upon immunization the generation of highly specific fully human mAbs for therapeutic applications. Apart from being extremely beneficial, mAbs are a huge success commercially. However, despite cell fusion generating many useful mAbs questions have been asked about which types of cells are prone to fuse and whether other methods may identify a wider range of binders. -
Individual Results of Published Data from Studies of Myostatin Inhibition in Animal Models
Supplementary table 1: Individual results of published data from studies of myostatin inhibition in animal models. Species/model Compound, Age at Length of Body weight Muscle morphology Fiber-type specific Absolute Specific Absolute Specific Stress- Creatine Histopathological effect of Reference (condition) (delivery) treatment treatment or changes force/ force/ force/ force/ induced kinase myostatin inhibition start age at exam if glycolytic glycolytic oxidative oxidative force drop knock-out Antibodies blocking myostatin Mouse/ C57BL/6 JA16 5-8 weeks 15 weeks 110 % vs Increased weight in Quad and [1] (male) control, still Gas growth phase Mouse/ BALB/c 7-8 weeks 4 weeks Increased fiber size in EDL (female) Mouse/ BALB/c 8 weeks Increased weight in Gas and (female) Quad Mouse/ wild-type ATA 842 10 weeks 4 weeks Increased Increased weight in Gas Grip strength [2] increased Mouse/ mdx JA16 4 weeks 3 months Increased Increased weight and single EDL twitch EDL: No No effect of Decreased Diaphragm: Less fibrosis and [3] fiber size in EDL + tetanic effect treatment cellular infiltration force increased Mouse/ Sgcg-/- JA16 4 weeks 3 months No difference Increased weight and single EDL twitch EDL: No No effect of No effect Hydroxyproline reduced in TA [4] (LGMD 2C) fiber size in EDL + tetanic effect treatment but not diaphragm and EDL. force Histopathology in all three increased muscles without improvement. Mouse/ Sgcd-/- JA16 4 weeks 3 months Increased weight in Gas, Gas and diaphragm: No [5] (LGMD 2F) Plantaris, TA and Quad difference in fibrosis. 20 weeks 3 months Increased weight in TA and Gas and diaphragm: Fibrosis Quad increased Mouse/ mdx PF-354 16-17 days 5 weeks No difference Increased weight in EDL Diaphragm: Diaphrag No effect of Reduced connective tissue [6] Soleus, TA, Gas and Quad.