Comparison Between ROV Video and Agassiz Trawl Methods for Sampling
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Early Stages of Fishes in the Western North Atlantic Ocean Volume
ISBN 0-9689167-4-x Early Stages of Fishes in the Western North Atlantic Ocean (Davis Strait, Southern Greenland and Flemish Cap to Cape Hatteras) Volume One Acipenseriformes through Syngnathiformes Michael P. Fahay ii Early Stages of Fishes in the Western North Atlantic Ocean iii Dedication This monograph is dedicated to those highly skilled larval fish illustrators whose talents and efforts have greatly facilitated the study of fish ontogeny. The works of many of those fine illustrators grace these pages. iv Early Stages of Fishes in the Western North Atlantic Ocean v Preface The contents of this monograph are a revision and update of an earlier atlas describing the eggs and larvae of western Atlantic marine fishes occurring between the Scotian Shelf and Cape Hatteras, North Carolina (Fahay, 1983). The three-fold increase in the total num- ber of species covered in the current compilation is the result of both a larger study area and a recent increase in published ontogenetic studies of fishes by many authors and students of the morphology of early stages of marine fishes. It is a tribute to the efforts of those authors that the ontogeny of greater than 70% of species known from the western North Atlantic Ocean is now well described. Michael Fahay 241 Sabino Road West Bath, Maine 04530 U.S.A. vi Acknowledgements I greatly appreciate the help provided by a number of very knowledgeable friends and colleagues dur- ing the preparation of this monograph. Jon Hare undertook a painstakingly critical review of the entire monograph, corrected omissions, inconsistencies, and errors of fact, and made suggestions which markedly improved its organization and presentation. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Updated Checklist of Marine Fishes (Chordata: Craniata) from Portugal and the Proposed Extension of the Portuguese Continental Shelf
European Journal of Taxonomy 73: 1-73 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2014.73 www.europeanjournaloftaxonomy.eu 2014 · Carneiro M. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:9A5F217D-8E7B-448A-9CAB-2CCC9CC6F857 Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf Miguel CARNEIRO1,5, Rogélia MARTINS2,6, Monica LANDI*,3,7 & Filipe O. COSTA4,8 1,2 DIV-RP (Modelling and Management Fishery Resources Division), Instituto Português do Mar e da Atmosfera, Av. Brasilia 1449-006 Lisboa, Portugal. E-mail: [email protected], [email protected] 3,4 CBMA (Centre of Molecular and Environmental Biology), Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal. E-mail: [email protected], [email protected] * corresponding author: [email protected] 5 urn:lsid:zoobank.org:author:90A98A50-327E-4648-9DCE-75709C7A2472 6 urn:lsid:zoobank.org:author:1EB6DE00-9E91-407C-B7C4-34F31F29FD88 7 urn:lsid:zoobank.org:author:6D3AC760-77F2-4CFA-B5C7-665CB07F4CEB 8 urn:lsid:zoobank.org:author:48E53CF3-71C8-403C-BECD-10B20B3C15B4 Abstract. The study of the Portuguese marine ichthyofauna has a long historical tradition, rooted back in the 18th Century. Here we present an annotated checklist of the marine fishes from Portuguese waters, including the area encompassed by the proposed extension of the Portuguese continental shelf and the Economic Exclusive Zone (EEZ). The list is based on historical literature records and taxon occurrence data obtained from natural history collections, together with new revisions and occurrences. -
Supplementary Material
The following supplement accompanies the article Drivers of deep Mediterranean megabenthos communities along longitudinal and bathymetric gradients Samuele Tecchio1,*, Eva Ramírez-Llodra1, Francisco Sardà1, Joan B. Company1, Isabel Palomera1, Ariadna Mechó1, Rut Pedrosa-Pàmies2, Anna Sanchez-Vidal2 1Institut de Ciències del Mar (CSIC), 08003 Barcelona, Spain 2GRC Geociències Marines, Universitat de Barcelona, 08028 Barcelona, Spain *Email: [email protected] Marine Ecology Progress Series 439:181–192 (2011) Supplement 1. Faunal list of the presence (*) or absence of species in collections taken at different depths (m) in 4 zones, from otter-trawl Maireta System (OTMS) and Agassiz samples. A: only Agassiz samples were available Catalan Sea Southern Balearic Western Ionian South of Crete 1200 2000 2700 1200 2000 2800 1200 2000A 2800 3300A 4000A 1200 2000 3000A Arthropoda Amphipoda Phronimoidea Phronima sedentaria * * * Decapoda Aristeidae Aristeus antennatus * * * * * * * * * * Axiidae Calocaris macandreae * * Benthesicymidae Gennadas elegans * * * * * * * * * * Crangonidae Pontophilus norvegicus * * * * Galatheidae Munida tenuimana * * * * Munidopsis ariadne * Geryonidae Chaceon mediterraneus * * * * * Geryon longipes * * * Homolidae Paromola cuvieri * Inachidae Macropodia longipes * * Nematocarcinidae Nematocarcinus exilis * * * * * * * * * * Oplophoridae Acantephyra eximia * * * * * * * * * * * * * Acantephyra pelagica * * * * * * * * * Paguridae Pagurus alatus * * Palaemonidae Periclimenes sp. * Pandalidae Plesionika acanthonotus * -
Mediterranean Sea
OVERVIEW OF THE CONSERVATION STATUS OF THE MARINE FISHES OF THE MEDITERRANEAN SEA Compiled by Dania Abdul Malak, Suzanne R. Livingstone, David Pollard, Beth A. Polidoro, Annabelle Cuttelod, Michel Bariche, Murat Bilecenoglu, Kent E. Carpenter, Bruce B. Collette, Patrice Francour, Menachem Goren, Mohamed Hichem Kara, Enric Massutí, Costas Papaconstantinou and Leonardo Tunesi MEDITERRANEAN The IUCN Red List of Threatened Species™ – Regional Assessment OVERVIEW OF THE CONSERVATION STATUS OF THE MARINE FISHES OF THE MEDITERRANEAN SEA Compiled by Dania Abdul Malak, Suzanne R. Livingstone, David Pollard, Beth A. Polidoro, Annabelle Cuttelod, Michel Bariche, Murat Bilecenoglu, Kent E. Carpenter, Bruce B. Collette, Patrice Francour, Menachem Goren, Mohamed Hichem Kara, Enric Massutí, Costas Papaconstantinou and Leonardo Tunesi The IUCN Red List of Threatened Species™ – Regional Assessment Compilers: Dania Abdul Malak Mediterranean Species Programme, IUCN Centre for Mediterranean Cooperation, calle Marie Curie 22, 29590 Campanillas (Parque Tecnológico de Andalucía), Málaga, Spain Suzanne R. Livingstone Global Marine Species Assessment, Marine Biodiversity Unit, IUCN Species Programme, c/o Conservation International, Arlington, VA 22202, USA David Pollard Applied Marine Conservation Ecology, 7/86 Darling Street, Balmain East, New South Wales 2041, Australia; Research Associate, Department of Ichthyology, Australian Museum, Sydney, Australia Beth A. Polidoro Global Marine Species Assessment, Marine Biodiversity Unit, IUCN Species Programme, Old Dominion University, Norfolk, VA 23529, USA Annabelle Cuttelod Red List Unit, IUCN Species Programme, 219c Huntingdon Road, Cambridge CB3 0DL,UK Michel Bariche Biology Departement, American University of Beirut, Beirut, Lebanon Murat Bilecenoglu Department of Biology, Faculty of Arts and Sciences, Adnan Menderes University, 09010 Aydin, Turkey Kent E. Carpenter Global Marine Species Assessment, Marine Biodiversity Unit, IUCN Species Programme, Old Dominion University, Norfolk, VA 23529, USA Bruce B. -
The Exceptional Diversity of Visual Adaptations in Deep-Sea Teleost Fishes
Seminars in Cell and Developmental Biology xxx (xxxx) xxx–xxx Contents lists available at ScienceDirect Seminars in Cell & Developmental Biology journal homepage: www.elsevier.com/locate/semcdb Review The exceptional diversity of visual adaptations in deep-sea teleost fishes Fanny de Busserolles*, Lily Fogg, Fabio Cortesi, Justin Marshall Queensland Brain Institute, The University of Queensland, St Lucia, Queensland 4072, Australia ARTICLE INFO ABSTRACT Keywords: The deep-sea is the largest and one of the dimmest habitats on earth. In this extreme environment, every photon Deep-sea teleost counts and may make the difference between life and death for its inhabitants. Two sources of light are present Dim-light vision in the deep-sea; downwelling light, that becomes dimmer and spectrally narrower with increasing depth until Ocular adaptation completely disappearing at around 1000 m, and bioluminescence, the light emitted by animals themselves. Retina Despite these relatively dark and inhospitable conditions, many teleost fish have made the deep-sea their home, Opsin relying heavily on vision to survive. Their visual systems have had to adapt, sometimes in astonishing and Bioluminescence bizarre ways. This review examines some aspects of the visual system of deep-sea teleosts and highlights the exceptional diversity in both optical and retinal specialisations. We also reveal how widespread several of these adaptations are across the deep-sea teleost phylogeny. Finally, the significance of some recent findings as well as the surprising diversity in visual adaptations is discussed. 1. Introduction or mate detection, to communicate, camouflage, or for navigation, in- cluding to stay within a particular depth range [4,5]. -
Program and Abstract Book
11th International Deep-Sea Biology Symposium NATIONAL OCEANOGRAPHY cENTRE, Southampton, UK 9 - 14 July 2006 BOOK OF ABSTRACTS Compiled by: Sven Thatje Paul Tyler Pam talbot tammy horton Lis Maclaren Sarah Murty Nina Rothe david billett 11th International Deep-Sea Biology Symposium National Oceanography Centre, Southampton Southampton Solent University Conference Centre Southampton UK 9 – 14 July 2006 Symposium Organising Committee • Professor Paul Tyler (Chair), NOC DEEPSEAS Group, UK. • Mrs Pam Talbot (Secretary), George Deacon Division, NOC, UK. • Dr David Billett, NOC DEEPSEAS Group, UK. • Dr Sven Thatje, NOC DEEPSEAS Group, UK. • Professor Monty Priede, OceanLab, University of Aberdeen, UK. • Dr Gordon Paterson, The Natural History Museum, London, UK. • Professor George Wolff, University of Liverpool, UK. • Dr Kerry Howell, Joint Nature Conservation Committee, UK. • Dr Alex Rogers, British Antarctic Survey, Cambridge, UK. • Dr Eva Ramirez Llodra, NOC DEEPSEAS/CSIC Barcelona, Spain. • Dr Phil Bagley, OceanLab, University of Aberdeen, UK. • Dr Maria Baker, NOC DEEPSEAS Group, UK. • Dr Brian Bett, NOC DEEPSEAS Group, UK. • Dr Jon Copley, NOC DEEPSEAS Group, UK. • Dr Adrian Glover, The Natural History Museum, London, UK. • Professor Andrew Gooday, NOC DEEPSEAS Group, UK. • Dr Lawrence Hawkins, NOC DEEPSEAS Group, UK. • Dr Tammy Horton, NOC DEEPSEAS Group, UK. • Dr Ian Hudson, NOC DEEPSEAS Group, UK. • Dr Alan Hughes, NOC DEEPSEAS Group, UK. • Dr Bhavani Narayanaswamy, Scottish Association for Marine Science, Oban, UK. • Dr Martin Sheader, NOC DEEPSEAS Group, UK. • Miss Michelle Sterckx, Southampton Solent University Conference Centre, UK. • Dr Ben Wigham, OceanLab, University of Aberdeen, UK. • Supported by the DEEPSEAS post-graduate/doctorate team: Lis Maclaren, Sarah Murty, Nina Rothe, Tania Smith, John Dinley, Chris Hauton, Jon Copley, Hannah Flint, Abigail Pattenden, Emily Dolan, Teresa Madurell, Teresa Amaro, Janne Kaariainen, Daniel Jones, Kate Larkin, Eulogio Soto. -
Mediterranean Deep-Sea Ecosystems: Biodiversity, Functioning and Vulnerability”
MEDITERRANEAN DEEP -SEA ECOSYSTEMS : BIODIVERSITY , FUNCTIONING AND VULNERABILITY ECOSISTÈMES PROFUNDS DE LA MEDITERRÀNIA : BIODIVERSITAT , FUNCIONAMENT I VULNERABILITAT Samuele Tecchio Memòria presentada per a optar al grau de Doctor per la Universitat de Barcelona Programa de Doctorat en Biodiversitat Directors: Dr. Francisco Sardà Amills Dra. Eva Zoe Ramírez Llodra Dept. de Recursos Marins Renovables Dept. de Recursos Marins Renovables Institut de Ciències del Mar (CSIC) Institut de Ciències del Mar (CSIC) Tutor: Dra. Creu Palacín Cabañas Dept. de Biologia Animal 2012 “Mediterranean deep-sea ecosystems: biodiversity, functioning and vulnerability” The author has been financed by a JAE pre-doctoral grant from the Spanish Research Council (CSIC), from December 2008 to November 2012. This work has been carried out in the framework of the following research projects: - BIOFUN (CTM2007-28739-E), from the European Science Foundation (ESF); - PROMETEO (CTM2007-66316-C02/MAR), from the CYCIT, Spain; - HERMIONE (G.A. 226354), from the European Union. Preface: three paths In offering this book to the public the writer uses no sophistry as an excuse for its existence. The hypocritical cant of reformed (?) gamblers, or whining, mealymouthed pretensions of piety, are not foisted as a justification for imparting the knowledge it contains. […] It may caution the unwary who are innocent of guile, and it may inspire the crafty by enlightenment on artifice. […] But it will not make the innocent vicious, or transform the pastime player into a professional; or make the fool wise, or surtail thae annual crop of suckers, but whatever the result may be, if it sells it will accomplish the primary motive of its author, as he needs the money. -
Commented Checklist of Marine Fishes from the Galicia Bank Seamount (NW Spain)
Zootaxa 4067 (3): 293–333 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2016 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.4067.3.2 http://zoobank.org/urn:lsid:zoobank.org:pub:50B7E074-F212-4193-BFB9-84A1D0A0E03C Commented checklist of marine fishes from the Galicia Bank seamount (NW Spain) RAFAEL BAÑON1,2, JUAN CARLOS ARRONTE3, CRISTINA RODRIGUEZ-CABELLO3, CARMEN-GLORIA PIÑEIRO4, ANTONIO PUNZON3 & ALBERTO SERRANO3 1Servizo de Planificación, Dirección Xeral de Recursos Mariños, Consellería de Pesca e Asuntos Marítimos, Rúa do Valiño 63–65, 15703 Santiago de Compostela, Spain. E-mail: [email protected] 2Grupo de Estudos do Medio Mariño (GEMM), puerto deportivo s/n 15960 Ribeira, A Coruña, Spain 3Instituto Español de Oceanografía, C.O. de Santander, Promontorio San Martín s/n, 39004 Santander, Spain E-mail: [email protected] (J.C.A); [email protected] (C.R.-C.); [email protected]; [email protected] (A.S). 4Instituto Español de Oceanografía, C.O. de Vigo, Subida Radio Faro 50. 36390 Vigo, Pontevedra, Spain. E-mail: [email protected] (C.-G.P.) Abstract A commented checklist containing 139 species of marine fishes recorded at the Galician Bank seamount is presented. The list is based on nine prospecting and research surveys carried out from 1980 to 2011 with different fishing gears. The ich- thyofauna list is diversified in 2 superclasses, 3 classes, 20 orders, 62 families and 113 genera. The largest family is Mac- rouridae, with 9 species, followed by Moridae, Stomiidae and Sternoptychidae with 7 species each. -
Wkcofibyc 2021
WORKSHOP ON FISH OF CONSERVATION AND BYCATCH RELEVANCE (WKCOFIBYC; outputs from 2020 meeting) VOLUME 3 | ISSUE 57 ICES SCIENTIFIC REPORTS RAPPORTS SCIENTIFIQUES DU CIEM ICES INTERNATIONAL COUNCIL FOR THE EXPLORATION OF THE SEA CIEM CONSEIL INTERNATIONAL POUR L’EXPLORATION DE LA MER International Council for the Exploration of the Sea Conseil International pour l’Exploration de la Mer H.C. Andersens Boulevard 44-46 DK-1553 Copenhagen V Denmark Telephone (+45) 33 38 67 00 Telefax (+45) 33 93 42 15 www.ices.dk [email protected] ISSN number: 2618-1371 This document has been produced under the auspices of an ICES Expert Group or Committee. The contents therein do not necessarily represent the view of the Council. © 2021 International Council for the Exploration of the Sea. This work is licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0). For citation of datasets or conditions for use of data to be included in other databases, please refer to ICES data policy. ICES Scientific Reports Volume 3 | Issue 57 WORKSHOP ON FISH OF CONSERVATION AND BYCATCH RELEVANCE (WKCOFIBYC) Recommended format for purpose of citation: ICES. 2021. Workshop on Fish of Conservation and Bycatch Relevance (WKCOFIBYC). ICES Scientific Reports. 3:57. 125 pp. https://doi.org/10.17895/ices.pub.8194 Editors Maurice Clarke Authors Sara Bonanomi • Archontia Chatzispyrou • Maurice Clarke • Bram Couperus • Jim Ellis • Ruth Fernández • Ailbhe Kavanagh • Allen Kingston • Vasiliki Kousteni • Evgenia Lefkaditou • Henn Ojaveer Wolfgang Nikolaus Probst • -
Parasitisation by Bathycreadium Elongatum (Digenea, Opecoelidae) in Pyloric Caeca of Trachyrincus Scabrus (Teleostei, Macrouridae)
Vol. 96: 239–247, 2011 DISEASES OF AQUATIC ORGANISMS Published October 6 doi: 10.3354/dao02393 Dis Aquat Org Parasitisation by Bathycreadium elongatum (Digenea, Opecoelidae) in pyloric caeca of Trachyrincus scabrus (Teleostei, Macrouridae) M. Constenla1,*, M. Carrassón1, C. M. Moyà1, A. Fernàndez-Chacón1, F. Padrós1, A. Repullés-Albelda1,2, F. E. Montero1,2 1Departament de Biologia Animal, Biologia Vegetal i Ecologia, Universitat Autònoma de Barcelona, Cerdanyola, 08193 Barcelona, Spain 2Cavanilles Institute of Biodiversity and Evolutionary Biology and Department of Zoology, University of Valencia, 46100 Valencia, Spain ABSTRACT: A novel process of transmural passive displacement of a digenean parasite was stud- ied in the digestive tract of the roughsnout grenadier Trachyrincus scabrus, which is found in the northwestern Mediterranean Sea. This mechanism seems to facilitate the elimination of a signifi- cant portion of intestinal parasites. The digenean parasite Bathycreadium elongatum was found in the intestine, mainly within pyloric caeca, in 74.4% of T. scabrus, with a mean abundance of 44 individuals per fish. Nodule-like lesions were also found in the mesentery of pyloric caeca of infected T. scabrus. Histological sections of the nodules revealed granulomatous inflammatory responses surrounding degraded digeneans. Partial nucleotide sequences of the 28S rRNA gene obtained from intracaecal B. elongatum and from the core of the nodules of the mesentery of pyloric caeca showed 100% mutual identity with an overlap of 971 bp. The greatest abundance of both intracaecal B. elongatum and nodules occurred in spring. During summer, and especially autumn, the abundance of intracaecal B. elongatum decreased. Prevalence and abundance of nodules increased in autumn. -
Evolution of Hemoglobin Genes In
www.nature.com/scientificreports OPEN Evolution of Hemoglobin Genes in Codfshes Infuenced by Ocean Depth Received: 9 January 2017 Helle Tessand Baalsrud1, Kjetil Lysne Voje1, Ole Kristian Tørresen1, Monica Hongrø Solbakken 1, Accepted: 11 July 2017 Michael Matschiner1,2, Martin Malmstrøm1, Reinhold Hanel3, Walter Salzburger1,2, Kjetill S. Published: xx xx xxxx Jakobsen 1 & Sissel Jentoft1,4 Understanding the genetic basis of adaptation is one of the main enigmas of evolutionary biology. Among vertebrates, hemoglobin has been well documented as a key trait for adaptation to diferent environments. Here, we investigate the role of hemoglobins in adaptation to ocean depth in the diverse teleost order Gadiformes, with species distributed at a wide range of depths varying in temperature, hydrostatic pressure and oxygen levels. Using genomic data we characterized the full hemoglobin (Hb) gene repertoire for subset of species within this lineage. We discovered a correlation between expanded numbers of Hb genes and ocean depth, with the highest numbers in species occupying shallower, epipelagic regions. Moreover, we demonstrate that the Hb genes have functionally diverged through diversifying selection. Our results suggest that the more variable environment in shallower water has led to selection for a larger Hb gene repertoire and that Hbs have a key role in adaptive processes in marine environments. Understanding the genetic basis for how organisms adapt to specifc environments is a fundamental challenge within evolutionary biology. Te use of model systems allowing genetic manipulation has in many cases shown to be a powerful approach1–3. However, for non-model species - including deep-sea and cold-adapted teleost fsh - with limited options for experimental manipulations and where little pre-existing knowledge is available, comparative genomics is a powerful route to apply4, 5.