Constancea 83.1: Trentepohliales Revisited 12/17/2002 02:55:50 PM Constancea 83, 2002 University and Jepson Herbaria P.C
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Phylogenetic Placement of Botryococcus Braunii (Trebouxiophyceae) and Botryococcus Sudeticus Isolate Utex 2629 (Chlorophyceae)1
J. Phycol. 40, 412–423 (2004) r 2004 Phycological Society of America DOI: 10.1046/j.1529-8817.2004.03173.x PHYLOGENETIC PLACEMENT OF BOTRYOCOCCUS BRAUNII (TREBOUXIOPHYCEAE) AND BOTRYOCOCCUS SUDETICUS ISOLATE UTEX 2629 (CHLOROPHYCEAE)1 Hoda H. Senousy, Gordon W. Beakes, and Ethan Hack2 School of Biology, University of Newcastle upon Tyne, Newcastle upon Tyne NE1 7RU, UK The phylogenetic placement of four isolates of a potential source of renewable energy in the form of Botryococcus braunii Ku¨tzing and of Botryococcus hydrocarbon fuels (Metzger et al. 1991, Metzger and sudeticus Lemmermann isolate UTEX 2629 was Largeau 1999, Banerjee et al. 2002). The best known investigated using sequences of the nuclear small species is Botryococcus braunii Ku¨tzing. This organism subunit (18S) rRNA gene. The B. braunii isolates has a worldwide distribution in fresh and brackish represent the A (two isolates), B, and L chemical water and is occasionally found in salt water. Although races. One isolate of B. braunii (CCAP 807/1; A race) it grows relatively slowly, it sometimes forms massive has a group I intron at Escherichia coli position 1046 blooms (Metzger et al. 1991, Tyson 1995). Botryococcus and isolate UTEX 2629 has group I introns at E. coli braunii strains differ in the hydrocarbons that they positions 516 and 1512. The rRNA sequences were accumulate, and they have been classified into three aligned with 53 previously reported rRNA se- chemical races, called A, B, and L. Strains in the A race quences from members of the Chlorophyta, includ- accumulate alkadienes; strains in the B race accumulate ing one reported for B. -
Plant-Parasitic Algae (Chlorophyta: Trentepohliales) in American Samoa1
Plant-Parasitic Algae (Chlorophyta: Trentepohliales) in American Samoa1 Fnd E. Erooks 2 Abstract: A survey conducted betweenJune 2000 and May 2002 on the island of Tutuila, American Samoa, recorded filamentous green algae of the order Tren tepohliales (CWorophyta) and their plant hosts. Putative pathogenicity of the parasitic genus Cephaleuros and its lichenized state, Strig;ula, was also inves tigated. Three genera and nine species were identified: Cephaleuros (five spp.), Phycopeltis (two spp.), and Stomatochroon (two spp.). A widely distributed species of Trentepohlia was not classified. These algae occurred on 146 plant species and cultivars in 101 genera and 48 families; 90% of the hosts were dicotyledonous plants. Cephaleuros spp. have aroused worldwide curiosity, confusion, and con cern for over a century. Their hyphaelike filaments, sporangiophores, and as sociated plant damage have led unsuspecting plant pathologists to misidentify them as fungi, and some phycologists question their parasitic ability. Of the five species of Cephaleuros identified, C. virescens was the most prevalent, followed by C. parasiticus. Leaf tissue beneath thalli of Cephaleuros spp. on 124 different hosts was dissected with a scalpel and depth of necrosis evaluated using a four point scale. No injury was observed beneath thalli on 6% of the hosts, but full thickness necrosis occurred on leaves of 43% of hosts. Tissue damage beneath nonlichenized Cephaleuros thalli was equal to or greater than damage beneath lichenized thalli (Strig;ula elegans). In spite of moderate to severe leaf necrosis caused by Cephaleuros spp., damage was usually confined to older leaves near the base of plants. Unhealthy, crowded, poorly maintained plants tended to have the highest percentage of leaf surface area affected by TrentepoWiales. -
50 Annual Meeting of the Phycological Society of America
50th Annual Meeting of the Phycological Society of America August 10-13 Drexel University Philadelphia, PA The Phycological Society of America (PSA) was founded in 1946 to promote research and teaching in all fields of Phycology. The society publishes the Journal of Phycology and the Phycological Newsletter. Annual meetings are held, often jointly with other national or international societies of mutual member interest. PSA awards include the Bold Award for the best student paper at the annual meeting, the Lewin Award for the best student poster at the annual meeting, the Provasoli Award for outstanding papers published in the Journal of Phycology, The PSA Award of Excellence (given to an eminent phycologist to recognize career excellence) and the Prescott Award for the best Phycology book published within the previous two years. The society provides financial aid to graduate student members through Croasdale Fellowships for enrollment in phycology courses, Hoshaw Travel Awards for travel to the annual meeting and Grants-In-Aid for supporting research. To join PSA, contact the membership director or visit the website: www.psaalgae.org LOCAL ORGANIZERS FOR THE 2015 PSA ANNUAL MEETING: Rick McCourt, Academy of Natural Sciences of Drexel University Naomi Phillips, Arcadia University PROGRAM DIRECTOR FOR 2015: Dale Casamatta, University of North Florida PSA OFFICERS AND EXECUTIVE COMMITTEE President Rick Zechman, College of Natural Resources and Sciences, Humboldt State University Past President John W. Stiller, Department of Biology, East Carolina University Vice President/President Elect Paul W. Gabrielson, Hillsborough, NC International Vice President Juliet Brodie, Life Sciences Department, Genomics and Microbial Biodiversity Division, Natural History Museum, Cromwell Road, London Secretary Chris Lane, Department of Biological Sciences, University of Rhode Island, Treasurer Eric W. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, f g h i,j,k e Pavel Skaloud , Charles F. Delwiche , Andrew H. Knoll , John A. Raven , Heroen Verbruggen , Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2, and Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, 9000 Ghent, Belgium; bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Zwijnaarde, Belgium; cVlaams Instituut voor Biotechnologie Center for Plant Systems Biology, 9052 Zwijnaarde, Belgium; dBioinformatics Institute Ghent, Ghent University, 9052 Zwijnaarde, Belgium; eSchool of Biosciences, University of Melbourne, Melbourne, VIC 3010, Australia; fDepartment of Botany, Faculty of Science, Charles University, CZ-12800 Prague 2, Czech Republic; gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742; hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom; jSchool of Biological Sciences, University of Western Australia, WA 6009, Australia; kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia; and lMeise Botanic Garden, 1860 Meise, Belgium Edited by Pamela S. Soltis, University of Florida, Gainesville, FL, and approved December 13, 2019 (received for review June 11, 2019) The Neoproterozoic Era records the transition from a largely clear interpretation of how many times and when green seaweeds bacterial to a predominantly eukaryotic phototrophic world, creat- emerged from unicellular ancestors (8). ing the foundation for the complex benthic ecosystems that have There is general consensus that an early split in the evolution sustained Metazoa from the Ediacaran Period onward. -
Plant Life MagillS Encyclopedia of Science
MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D. -
Lateral Gene Transfer of Anion-Conducting Channelrhodopsins Between Green Algae and Giant Viruses
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.15.042127; this version posted April 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 5 Lateral gene transfer of anion-conducting channelrhodopsins between green algae and giant viruses Andrey Rozenberg 1,5, Johannes Oppermann 2,5, Jonas Wietek 2,3, Rodrigo Gaston Fernandez Lahore 2, Ruth-Anne Sandaa 4, Gunnar Bratbak 4, Peter Hegemann 2,6, and Oded 10 Béjà 1,6 1Faculty of Biology, Technion - Israel Institute of Technology, Haifa 32000, Israel. 2Institute for Biology, Experimental Biophysics, Humboldt-Universität zu Berlin, Invalidenstraße 42, Berlin 10115, Germany. 3Present address: Department of Neurobiology, Weizmann 15 Institute of Science, Rehovot 7610001, Israel. 4Department of Biological Sciences, University of Bergen, N-5020 Bergen, Norway. 5These authors contributed equally: Andrey Rozenberg, Johannes Oppermann. 6These authors jointly supervised this work: Peter Hegemann, Oded Béjà. e-mail: [email protected] ; [email protected] 20 ABSTRACT Channelrhodopsins (ChRs) are algal light-gated ion channels widely used as optogenetic tools for manipulating neuronal activity 1,2. Four ChR families are currently known. Green algal 3–5 and cryptophyte 6 cation-conducting ChRs (CCRs), cryptophyte anion-conducting ChRs (ACRs) 7, and the MerMAID ChRs 8. Here we 25 report the discovery of a new family of phylogenetically distinct ChRs encoded by marine giant viruses and acquired from their unicellular green algal prasinophyte hosts. -
2004 University of Connecticut Storrs, CT
Welcome Note and Information from the Co-Conveners We hope you will enjoy the NEAS 2004 meeting at the scenic Avery Point Campus of the University of Connecticut in Groton, CT. The last time that we assembled at The University of Connecticut was during the formative years of NEAS (12th Northeast Algal Symposium in 1973). Both NEAS and The University have come along way. These meetings will offer oral and poster presentations by students and faculty on a wide variety of phycological topics, as well as student poster and paper awards. We extend a warm welcome to all of our student members. The Executive Committee of NEAS has extended dormitory lodging at Project Oceanology gratis to all student members of the Society. We believe this shows NEAS members’ pride in and our commitment to our student members. This year we will be honoring Professor Arthur C. Mathieson as the Honorary Chair of the 43rd Northeast Algal Symposium. Art arrived with his wife, Myla, at the University of New Hampshire in 1965 from California. Art is a Professor of Botany and a Faculty in Residence at the Jackson Estuarine Laboratory of the University of New Hampshire. He received his Bachelor of Science and Master’s Degrees at the University of California, Los Angeles. In 1965 he received his doctoral degree from the University of British Columbia, Vancouver, Canada. Over a 43-year career Art has supervised many undergraduate and graduate students studying the ecology, systematics and mariculture of benthic marine algae. He has been an aquanaut-scientist for the Tektite II and also for the FLARE submersible programs. -
Cephaleuros Species, the Plant-Parasitic Green Algae
Plant Disease Aug. 2008 PD-43 Cephaleuros Species, the Plant-Parasitic Green Algae Scot C. Nelson Department of Plant and Environmental Protection Sciences ephaleuros species are filamentous green algae For information on other Cephaleuros species and and parasites of higher plants. In Hawai‘i, at least their diseases in our region, please refer to the technical twoC of horticultural importance are known: Cephaleu- report by Fred Brooks (in References). To see images of ros virescens and Cephaleuros parasiticus. Typically Cephaleuros minimus on noni in American Samoa, visit harmless, generally causing minor diseases character- the Hawai‘i Pest and Disease Image Gallery (www.ctahr. ized by negligible leaf spots, on certain crops in moist hawaii.edu/nelsons/Misc), and click on “noni.” environments these algal diseases can cause economic injury to plant leaves, fruits, and stems. C. virescens is The pathogen the most frequently reported algal pathogen of higher The disease is called algal leaf spot, algal fruit spot, and plants worldwide and has the broadest host range among green scurf; Cephaleuros infections on tea and coffee Cephaleuros species. Frequent rains and warm weather plants have been called “red rust.” These are aerophilic, are favorable conditions for these pathogens. For hosts, filamentous green algae. Although aerophilic and ter- poor plant nutrition, poor soil drainage, and stagnant air restrial, they require a film of water to complete their are predisposing factors to infection by the algae. life cycles. The genus Cephaleuros is a member of the Symptoms and crop damage can vary greatly depend- Trentepohliales and a unique order, Chlorophyta, which ing on the combination of Cephaleuros species, hosts and contains the photosynthetic organisms known as green environments. -
The Chloroplast Genome Sequence of the Green Alga Leptosira Terrestris
BMC Genomics BioMed Central Research article Open Access The chloroplast genome sequence of the green alga Leptosira terrestris: multiple losses of the inverted repeat and extensive genome rearrangements within the Trebouxiophyceae Jean-Charles de Cambiaire, Christian Otis, Monique Turmel and Claude Lemieux* Address: Département de biochimie et de microbiologie, Université Laval, Québec, Canada Email: Jean-Charles de Cambiaire - [email protected]; Christian Otis - [email protected]; Monique Turmel - [email protected]; Claude Lemieux* - [email protected] * Corresponding author Published: 4 July 2007 Received: 21 March 2007 Accepted: 4 July 2007 BMC Genomics 2007, 8:213 doi:10.1186/1471-2164-8-213 This article is available from: http://www.biomedcentral.com/1471-2164/8/213 © 2007 de Cambiaire et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Background: In the Chlorophyta – the green algal phylum comprising the classes Prasinophyceae, Ulvophyceae, Trebouxiophyceae and Chlorophyceae – the chloroplast genome displays a highly variable architecture. While chlorophycean chloroplast DNAs (cpDNAs) deviate considerably from the ancestral pattern described for the prasinophyte Nephroselmis olivacea, the degree of remodelling sustained by the two ulvophyte cpDNAs completely sequenced to date is intermediate relative to those observed for chlorophycean and trebouxiophyte cpDNAs. Chlorella vulgaris (Chlorellales) is currently the only photosynthetic trebouxiophyte whose complete cpDNA sequence has been reported. To gain insights into the evolutionary trends of the chloroplast genome in the Trebouxiophyceae, we sequenced cpDNA from the filamentous alga Leptosira terrestris (Ctenocladales). -
Habitat Diversity of the Genus Physolinum Printz, Burdwan, West Bengal (India)
Journal of Acharaya Narendra Dev Research Institute l ISSN : 0976-3287 l Vol-27 (Jan 2019-Jun 2019) Habitat Diversity of the Genus Physolinum Printz, Burdwan, West Bengal (India) Habitat Diversity of the Genus Physolinum Printz, barks were found in different colour in different season, Primarily the colour was green and in course of time the colour had been changed to yellow to deep orange depend upon the host or substratum. Yellow colour Burdwan, West Bengal (India) noticed especially in smooth bark whereas orange colour in rough bark. Survey explore the distribution specificity and physiological alteration of the organism in different season which gives us a clue in respective Prasanta Mallick * niche .Observation is given accordingly. Sunlight, relative humidity, and rainfall were the important factors which played a major role in determining the diversity and distribution of subaerial algal communities Abstract Rock- sample : Green form Habitat is the very important aspect of all living creatures, starts from animals to plants and from cryptogams to phanerogams. Algae are the very promising biological organism in all ecosystem especially in Plant body with less branched or unbranched, Cells are elliptical or barrel shaped, length is more than marine or fresh water habitat but also even in terrestrial -sub aerial habitat. Terrestrial habitat is basically two times than width L. 29-37 µm, W.8-12 µm , cell wall is much stratified , Partitioned wall more or less depend upon some basic component like minerals nutrients, organic matter, water and air by different transverse, no constriction. Cell contains distinct discoid chloroplast. Mature intercalary cells containing composition and sub aerial habitats depend upon the existing substratum. -
New Insights Into Diversity and Selectivity of Trentepohlialean Lichen Photobionts from the Extratropics
Symbiosis DOI 10.1007/s13199-014-0285-z New insights into diversity and selectivity of trentepohlialean lichen photobionts from the extratropics Christina Hametner & Elfriede Stocker-Wörgötter & Martin Grube Received: 7 March 2014 /Accepted: 13 June 2014 # The Author(s) 2014. This article is published with open access at Springerlink.com Abstract Aerial green algae of Trentepohliaceae can form Keywords ITS region . Lichen symbioses . Photobionts . conspicuous free-living colonies, be parasites of plants or Phylogeny . Temperate regions . Trentepohliaceae photobionts of lichen-forming ascomycetes. So far, their di- versity in temperate regions is still poorly known as it has been mostly studied by phenotypic approaches only. We present 1 Introduction new insights in the phylogenetic relationships of lichenized representatives from temperate and Mediterranean parts of The Trentepohliaceae are a widespread family of aero- Europe by analysis of 18S rRNA and rbcL gene fragments, terrestrial green algae which differs from other green algae and nuclear ITS sequence data. For this purpose we isolated in terms of their reproductive structures, phragmoplast- the trentepohlialean photobionts from lichens representing mediated cytokinesis, the lack of pyrenoids in the chloroplast different genera. Algal cultures from lichenized and free- and other characters (Rindi et al. 2009). In particular, the living Trentepohliaceae were used to design new primers for phragmoplasts are otherwise only known from the amplification of the marker loci. We constructed a phyloge- Charophyceae and from land plants (Chapman et al. 2001). netic hypothesis to reveal the phylogenetic placements of Trentepohlia colonies and of their allied genera are frequent lichenized lineages with 18S rRNA and rbcL sequences. ITS on rocks, buildings, tree barks, leaves, stems, and fruits (Printz variation among the clades was substantial and did not allow 1939; Chapman 1984;López-Bautistaetal.2002;Chapman including them in the general phylogenetic assessment, yet and Waters 2004; López-Bautista et al. -
2010 South Fork Holston River Environmental Monitoring Studies
2010 South Fork Holston River Environmental Monitoring Studies Patrick Center for Environmental Research 2010 South Fork Holston River Environmental Monitoring Studies Report No. 10-04F Submitted to: Eastman Chemical Company Tennessee Operations Submitted by: Patrick Center for Environmental Research 1900 Benjamin Franklin Parkway Philadelphia, PA 19103-1195 April 20, 2012 Executive Summary he 2010 study was the seventh in a series of comprehensive studies of aquatic biota and Twater chemistry conducted by the Academy of Natural Sciences of Drexel University in the vicinity of Kingsport, TN. Previous studies were conducted in 1965, 1967 (cursory study, primarily focusing on al- gae), 1974, 1977, 1980, 1990 and 1997. Elements of the 2010 study included analysis of land cover, basic environmental water chemistry, attached algae and aquatic macrophytes, aquatic insects, non-insect macroinvertebrates, and fish. For each study element, field samples were collected and analyzed from Scientists from the Academy's Patrick Center for Environmental Research zones located on the South Fork Holston River have conducted seven major environmental monitoring studies on the (Zones 2, 3 and 5), Big Sluice (Zone 4), mainstem South Fork Holston River since 1965. Holston River (Zone 6), and Horse Creek (Zones HC1and HC2), the approximate locations of which are shown below. The design of the 2010 study was very similar to that of previous surveys, allowing comparisons among surveys. In addition, two areas of potential local impacts were assessed for the first time: Big Tree Spring (BTS, located on the South Fork within Zone 2) and Kit Bottom (KU and KL in the Big Sluice, upstream of Zone 4).