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Asexual Life History by Biflagellate Zoids In
Aquatic Botany 91 (2009) 213–218 Contents lists available at ScienceDirect Aquatic Botany journal homepage: www.elsevier.com/locate/aquabot Asexual life history by biflagellate zoids in Monostroma latissimum (Ulotrichales) Felix Bast a,*, Satoshi Shimada b, Masanori Hiraoka a, Kazuo Okuda a a Graduate School of Kuroshio Science, Kochi University, 2-5-1 Akebono, Kochi 780-8520, Japan b Graduate School of Humanities and Sciences, Ochanomizu University, Tokyo 112-8610, Japan ARTICLE INFO ABSTRACT Article history: Monostroma latissimum (Kuetzing) Wittrock is a monostromatic green alga of commercial importance in Received 16 December 2008 Japan. Here we report the serendipitous discovery of asexually reproducing specimens collected from Received in revised form 26 May 2009 Usa, on the Pacific coast of Kochi Prefecture, south-western Japan. Zoids were found to be biflagellate and Accepted 24 June 2009 negatively phototactic. Germination of settled zoids was observed to follow erect-filamentous ontogeny Available online 1 July 2009 similar to that of the previously reported sexual strain. Moreover, the newly discovered asexual strain had identical sequences of nuclear encoded ITS (Internal Transcribed Spacer) region to that of the sexual Keywords: strain. On the basis of this finding, we postulate that the ITS sequences may have been maintained in Internal Transcribed Spacer these conspecific strains despite the evolution in sexuality. Relationships were investigated among M. Life history Phylogeny latissimum and other monostromatic taxa within the -
A Close-Up View on ITS2 Evolution and Speciation
Caisová et al. BMC Evolutionary Biology 2011, 11:262 http://www.biomedcentral.com/1471-2148/11/262 RESEARCH ARTICLE Open Access A close-up view on ITS2 evolution and speciation - a case study in the Ulvophyceae (Chlorophyta, Viridiplantae) Lenka Caisová1,2,3*†, Birger Marin1† and Michael Melkonian1 Abstract Background: The second Internal Transcriber Spacer (ITS2) is a fast evolving part of the nuclear-encoded rRNA operon located between the 5.8S and 28S rRNA genes. Based on crossing experiments it has been proposed that even a single Compensatory Base Change (CBC) in helices 2 and 3 of the ITS2 indicates sexual incompatibility and thus separates biological species. Taxa without any CBC in these ITS2 regions were designated as a ‘CBC clade’. However, in depth comparative analyses of ITS2 secondary structures, ITS2 phylogeny, the origin of CBCs, and their relationship to biological species have rarely been performed. To gain ‘close-up’ insights into ITS2 evolution, (1) 86 sequences of ITS2 including secondary structures have been investigated in the green algal order Ulvales (Chlorophyta, Viridiplantae), (2) after recording all existing substitutions, CBCs and hemi-CBCs (hCBCs) were mapped upon the ITS2 phylogeny, rather than merely comparing ITS2 characters among pairs of taxa, and (3) the relation between CBCs, hCBCs, CBC clades, and the taxonomic level of organisms was investigated in detail. Results: High sequence and length conservation allowed the generation of an ITS2 consensus secondary structure, and introduction of a novel numbering system of ITS2 nucleotides and base pairs. Alignments and analyses were based on this structural information, leading to the following results: (1) in the Ulvales, the presence of a CBC is not linked to any particular taxonomic level, (2) most CBC ‘clades’ sensu Coleman are paraphyletic, and should rather be termed CBC grades. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, f g h i,j,k e Pavel Skaloud , Charles F. Delwiche , Andrew H. Knoll , John A. Raven , Heroen Verbruggen , Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2, and Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, 9000 Ghent, Belgium; bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Zwijnaarde, Belgium; cVlaams Instituut voor Biotechnologie Center for Plant Systems Biology, 9052 Zwijnaarde, Belgium; dBioinformatics Institute Ghent, Ghent University, 9052 Zwijnaarde, Belgium; eSchool of Biosciences, University of Melbourne, Melbourne, VIC 3010, Australia; fDepartment of Botany, Faculty of Science, Charles University, CZ-12800 Prague 2, Czech Republic; gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742; hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom; jSchool of Biological Sciences, University of Western Australia, WA 6009, Australia; kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia; and lMeise Botanic Garden, 1860 Meise, Belgium Edited by Pamela S. Soltis, University of Florida, Gainesville, FL, and approved December 13, 2019 (received for review June 11, 2019) The Neoproterozoic Era records the transition from a largely clear interpretation of how many times and when green seaweeds bacterial to a predominantly eukaryotic phototrophic world, creat- emerged from unicellular ancestors (8). ing the foundation for the complex benthic ecosystems that have There is general consensus that an early split in the evolution sustained Metazoa from the Ediacaran Period onward. -
Uncovering Unique Green Algae and Cyanobacteria Isolated from Biocrusts in Highly Saline Potash Tailing Pile Habitats, Using an Integrative Approach
microorganisms Article Uncovering Unique Green Algae and Cyanobacteria Isolated from Biocrusts in Highly Saline Potash Tailing Pile Habitats, Using an Integrative Approach Veronika Sommer 1,2, Tatiana Mikhailyuk 3, Karin Glaser 1 and Ulf Karsten 1,* 1 Institute for Biological Sciences, Applied Ecology and Phycology, University of Rostock, 18059 Rostock, Germany; [email protected] (V.S.); [email protected] (K.G.) 2 upi UmweltProjekt Ingenieursgesellschaft mbH, 39576 Stendal, Germany 3 National Academy of Sciences of Ukraine, M.G. Kholodny Institute of Botany, 01601 Kyiv, Ukraine; [email protected] * Correspondence: [email protected] Received: 4 September 2020; Accepted: 22 October 2020; Published: 27 October 2020 Abstract: Potash tailing piles caused by fertilizer production shape their surroundings because of the associated salt impact. A previous study in these environments addressed the functional community “biocrust” comprising various micro- and macro-organisms inhabiting the soil surface. In that previous study, biocrust microalgae and cyanobacteria were isolated and morphologically identified amongst an ecological discussion. However, morphological species identification maybe is difficult because of phenotypic plasticity, which might lead to misidentifications. The present study revisited the earlier species list using an integrative approach, including molecular methods. Seventy-six strains were sequenced using the markers small subunit (SSU) rRNA gene and internal transcribed spacer (ITS). Phylogenetic analyses confirmed some morphologically identified species. However, several other strains could only be identified at the genus level. This indicates a high proportion of possibly unknown taxa, underlined by the low congruence of the previous morphological identifications to our results. In general, the integrative approach resulted in more precise species identifications and should be considered as an extension of the previous morphological species list. -
Lateral Gene Transfer of Anion-Conducting Channelrhodopsins Between Green Algae and Giant Viruses
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.15.042127; this version posted April 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 5 Lateral gene transfer of anion-conducting channelrhodopsins between green algae and giant viruses Andrey Rozenberg 1,5, Johannes Oppermann 2,5, Jonas Wietek 2,3, Rodrigo Gaston Fernandez Lahore 2, Ruth-Anne Sandaa 4, Gunnar Bratbak 4, Peter Hegemann 2,6, and Oded 10 Béjà 1,6 1Faculty of Biology, Technion - Israel Institute of Technology, Haifa 32000, Israel. 2Institute for Biology, Experimental Biophysics, Humboldt-Universität zu Berlin, Invalidenstraße 42, Berlin 10115, Germany. 3Present address: Department of Neurobiology, Weizmann 15 Institute of Science, Rehovot 7610001, Israel. 4Department of Biological Sciences, University of Bergen, N-5020 Bergen, Norway. 5These authors contributed equally: Andrey Rozenberg, Johannes Oppermann. 6These authors jointly supervised this work: Peter Hegemann, Oded Béjà. e-mail: [email protected] ; [email protected] 20 ABSTRACT Channelrhodopsins (ChRs) are algal light-gated ion channels widely used as optogenetic tools for manipulating neuronal activity 1,2. Four ChR families are currently known. Green algal 3–5 and cryptophyte 6 cation-conducting ChRs (CCRs), cryptophyte anion-conducting ChRs (ACRs) 7, and the MerMAID ChRs 8. Here we 25 report the discovery of a new family of phylogenetically distinct ChRs encoded by marine giant viruses and acquired from their unicellular green algal prasinophyte hosts. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
bioRxiv preprint doi: https://doi.org/10.1101/668475; this version posted June 12, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, Pavel Škaloudf, Charles F. Delwicheg, Andrew H. Knollh, John A. Raveni,j,k, Heroen Verbruggene, Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2 Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, Krijgslaan 281, 9000 Ghent, Belgium bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Zwijnaarde, Belgium cVIB Center for Plant Systems Biology, Technologiepark 71, 9052 Zwijnaarde, Belgium dBioinformatics Institute Ghent, Ghent University, Technologiepark 71, 9052 Zwijnaarde, Belgium eSchool of Biosciences, University of Melbourne, Melbourne, Victoria, Australia fDepartment of Botany, Faculty of Science, Charles University, Benátská 2, CZ-12800 Prague 2, Czech Republic gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, 02138, USA. iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee, DD2 5DA, UK jSchool of Biological Sciences, University of Western Australia (M048), 35 Stirling Highway, WA 6009, Australia kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia lMeise Botanic Garden, Nieuwelaan 38, 1860 Meise, Belgium 1To whom correspondence may be addressed. Email [email protected], [email protected], [email protected] or [email protected]. -
Marine Algal Flora of São Miguel Island, Azores
Biodiversity Data Journal 9: e64969 doi: 10.3897/BDJ.9.e64969 Data Paper Marine algal flora of São Miguel Island, Azores Ana I Azevedo Neto‡‡, Ignacio Moreu , Edgar F. Rosas Alquicira§, Karla León-Cisneros|, Eva Cacabelos¶,‡, Andrea Z Botelho#, Joana Micael ¤, Ana C Costa#, Raul M. A. Neto«, José M. N. Azevedo‡, Sandra Monteiro#, Roberto Resendes»,˄ Pedro Afonso , Afonso C. L. Prestes‡, Rita F. Patarra˅,‡, Nuno V. Álvaro¦, David Milla-Figueras˄, Enric Ballesterosˀ, Robert L. Fletcherˁ, William Farnhamˁ, Ian Tittley ₵, Manuela I. Parente# ‡ cE3c - Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, Faculdade de Ciências e Tecnologia, Departamento de Biologia, Universidade dos Açores, 9500-321 Ponta Delgada, Açores, Portugal § Lane Community College, 4000 East 30th Ave., Eugene, Oregon, United States of America | Universidad Autónoma de Baja California Sur, Departamento Académico de Ciencias Marinas y Costeras, Carretera al Sur Km. 5.5, colonia el Mezquitito, La Paz, Baja California Sur, 23080, Mexico ¶ MARE – Marine and Environmental Sciences Centre, Agência Regional para o Desenvolvimento da Investigação Tecnologia e Inovação (ARDITI), Edif. Madeira Tecnopolo, Piso 2, Caminho da Penteada, Funchal, Madeira, Portugal # CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Pólo dos Açores, Universidade dos Açores, Faculdade de Ciências e Tecnologia, Departamento de Biologia, 9500-321 Ponta Delgada, Açores, Portugal ¤ Southwest Iceland Nature Research Centre (SINRC), -
SPECIAL PUBLICATION 6 the Effects of Marine Debris Caused by the Great Japan Tsunami of 2011
PICES SPECIAL PUBLICATION 6 The Effects of Marine Debris Caused by the Great Japan Tsunami of 2011 Editors: Cathryn Clarke Murray, Thomas W. Therriault, Hideaki Maki, and Nancy Wallace Authors: Stephen Ambagis, Rebecca Barnard, Alexander Bychkov, Deborah A. Carlton, James T. Carlton, Miguel Castrence, Andrew Chang, John W. Chapman, Anne Chung, Kristine Davidson, Ruth DiMaria, Jonathan B. Geller, Reva Gillman, Jan Hafner, Gayle I. Hansen, Takeaki Hanyuda, Stacey Havard, Hirofumi Hinata, Vanessa Hodes, Atsuhiko Isobe, Shin’ichiro Kako, Masafumi Kamachi, Tomoya Kataoka, Hisatsugu Kato, Hiroshi Kawai, Erica Keppel, Kristen Larson, Lauran Liggan, Sandra Lindstrom, Sherry Lippiatt, Katrina Lohan, Amy MacFadyen, Hideaki Maki, Michelle Marraffini, Nikolai Maximenko, Megan I. McCuller, Amber Meadows, Jessica A. Miller, Kirsten Moy, Cathryn Clarke Murray, Brian Neilson, Jocelyn C. Nelson, Katherine Newcomer, Michio Otani, Gregory M. Ruiz, Danielle Scriven, Brian P. Steves, Thomas W. Therriault, Brianna Tracy, Nancy C. Treneman, Nancy Wallace, and Taichi Yonezawa. Technical Editor: Rosalie Rutka Please cite this publication as: The views expressed in this volume are those of the participating scientists. Contributions were edited for Clarke Murray, C., Therriault, T.W., Maki, H., and Wallace, N. brevity, relevance, language, and style and any errors that [Eds.] 2019. The Effects of Marine Debris Caused by the were introduced were done so inadvertently. Great Japan Tsunami of 2011, PICES Special Publication 6, 278 pp. Published by: Project Designer: North Pacific Marine Science Organization (PICES) Lori Waters, Waters Biomedical Communications c/o Institute of Ocean Sciences Victoria, BC, Canada P.O. Box 6000, Sidney, BC, Canada V8L 4B2 Feedback: www.pices.int Comments on this volume are welcome and can be sent This publication is based on a report submitted to the via email to: [email protected] Ministry of the Environment, Government of Japan, in June 2017. -
A Synoptic Key to the Rhodophyta of the Western Mediterranean Part. I Gig
A SYNOPTIC KEY TO THE RHODOPHYTA OF THE WESTERN MEDITERRANEAN PART. I GIG ARTIN ALES, H AL YMENIALES, HILDENBRANDIALES AND PLOCAMIALES C Rodriguez-Prieto, M Sabater, A Vergés To cite this version: C Rodriguez-Prieto, M Sabater, A Vergés. A SYNOPTIC KEY TO THE RHODOPHYTA OF THE WESTERN MEDITERRANEAN PART. I GIG ARTIN ALES, H AL YMENIALES, HILDENBRAN- DIALES AND PLOCAMIALES. Vie et Milieu / Life & Environment, Observatoire Océanologique - Laboratoire Arago, 2001, pp.55-65. hal-03192091 HAL Id: hal-03192091 https://hal.sorbonne-universite.fr/hal-03192091 Submitted on 7 Apr 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. VIE ET MILIEU, 2001, 51 (1-2) : 55-65 A SYNOPTIC KEY TO THE RHODOPHYTA OF THE WESTERN MEDITERRANEAN PART. I GIG ARTIN ALES, H AL YMENIALES, HILDENBRANDIALES AND PLOCAMIALES C. RODRIGUEZ-PRIETO, M.A. SABATER, A. VERGÉS Universitat de Girona, Facultat de Ciències, Campus de Montilivi, s/n. 17071 Girona, Spain E-mail:cacrp @fc. udg. es RHODOPHYTES RÉSUMÉ. - Une clé dichotomique pour la détermination des Gigartinales, Halymé- GIG ARTIN ALES niales, Hildenbrandiales et Plocamiales de Méditerranée occidentale est présentée. HALYMENIALES Elle a pour objectif de faciliter la reconnaissance de ces algues rouges. -
Seaweeds of California Green Algae
PDF version Remove references Seaweeds of California (draft: Sun Nov 24 15:32:39 2019) This page provides current names for California seaweed species, including those whose names have changed since the publication of Marine Algae of California (Abbott & Hollenberg 1976). Both former names (1976) and current names are provided. This list is organized by group (green, brown, red algae); within each group are genera and species in alphabetical order. California seaweeds discovered or described since 1976 are indicated by an asterisk. This is a draft of an on-going project. If you have questions or comments, please contact Kathy Ann Miller, University Herbarium, University of California at Berkeley. [email protected] Green Algae Blidingia minima (Nägeli ex Kützing) Kylin Blidingia minima var. vexata (Setchell & N.L. Gardner) J.N. Norris Former name: Blidingia minima var. subsalsa (Kjellman) R.F. Scagel Current name: Blidingia subsalsa (Kjellman) R.F. Scagel et al. Kornmann, P. & Sahling, P.H. 1978. Die Blidingia-Arten von Helgoland (Ulvales, Chlorophyta). Helgoländer Wissenschaftliche Meeresuntersuchungen 31: 391-413. Scagel, R.F., Gabrielson, P.W., Garbary, D.J., Golden, L., Hawkes, M.W., Lindstrom, S.C., Oliveira, J.C. & Widdowson, T.B. 1989. A synopsis of the benthic marine algae of British Columbia, southeast Alaska, Washington and Oregon. Phycological Contributions, University of British Columbia 3: vi + 532. Bolbocoleon piliferum Pringsheim Bryopsis corticulans Setchell Bryopsis hypnoides Lamouroux Former name: Bryopsis pennatula J. Agardh Current name: Bryopsis pennata var. minor J. Agardh Silva, P.C., Basson, P.W. & Moe, R.L. 1996. Catalogue of the benthic marine algae of the Indian Ocean. -
Eco-Physiological and Biochemical Study of Two of the Most Contrasting Forms of Chondrus Crispus (Rhodophyta, Gigartinales)
MARINE ECOLOGY PROGRESS SERIES Vol. 81: 185-195, 1992 Published April 21 Mar. Ecol. Prog. Ser. l Eco-physiological and biochemical study of two of the most contrasting forms of Chondrus crispus (Rhodophyta, Gigartinales) Thierry chopin', Jean-Yves ~loc'h~ ' Marine and Estuarine Research Group, Division of Sciences, University of New Brunswick, PO Box 5050, Saint John. New Brunswick, Canada E2L 4L5 Laboratoire de Physiologie Vegetale, Faculte des Sciences. Universite de Bretagne Occidentale. 6 Avenue V. Le Gorgeu. F-29287 Brest Cedex. France ABSTRACT: Seasonal variations of distribution of the gametophytic and tetrasporophytlc generations, growth, carrageenans, phosphorus and nitrogen nutrition, and dry matter content were studied in 2 of the most contrasting forms of the red alga Chondrus crispus Stackhouse in Britanny. France. Seasonal variations of generations were more pronounced in the infralittoral than in the midlittoral form; the former had more reproductively mature plants and twice as many tetrasporophytes. Growth was greater in the infralittoral than in the midlittoral form. Contents of total carrageenans were comparable in the 2 forms; the K-, L-, and p-carrageenan structures did not vary significantly (qualitatively, quantitatively, during the year, or between the 2 forms). The midlittoral form had a higher total phosphorus content, more marked seasonal variations and an earlier spring decline than the infralittoral form Seasonal variations of total nitrogen content had different patterns in the 2 forins during summer The dry matter content of the infralittoral form was lower than that of the midlittoral form. These eco-physiological and biochemical differences and similarities are discussed in terms of the polymorphism of this alga. -
Биота И Среда Заповедников * Biodiversity Environment
ISSN 2227-149X РОССИЙСКАЯ АКАДЕМИЯ НАУК ДАЛЬНЕВОСТОЧНОЕ ОТДЕЛЕНИЕ ДАЛЬНЕВОСТОЧНЫЙ МОРСКОЙ БИОСФЕРНЫЙ ЗАПОВЕДНИК БИОТА И СРЕДА ЗАПОВЕДНИКОВ ДАЛЬНЕГО ВОСТОКА * BIODIVERSITY AND ENVIRONMENT OF FAR EAST RESERVES № 1 2014 Владивосток Журнал «Биота и среда заповедников Дальнего Востока. Biodiversity and Environment of Far East Reserves» принимает и публикует статьи на русском или на английском языке с результатами естественнонаучных изучений биоты и среды охраняемых территорий и акваторий Дальнего Востока, их описания, обзоры исследований, списки видов и их дополнения, краткие сообщения о природных феноменах и т.д. Периодичность выхода журнала – 2 номера в год. С целью демонстрации доброжелательной политики редакции журнала по отношению к статьям с результатами изучения охраняемых территорий и акваторий всех категорий и размеров в первом номере журнала опубликованы статьи только об исследованиях морского заказника краевого значения "Залив Восток" (Приморский край). * The journal “Biodiversity and Environment of Far East Reserves” considers and publishes papers in Russian and English with results of natural- science fundamental and applied natural-science studies of the biological diversity and environment of reserves and other specially protected natural territories and waters in the Far East of Asia. The fields of research studies to be published are as follows: general biology, zoology, botany, ecology, embryology, genetics, microbiology, physiology of plants, meteorology, oceanology, hydrology of land, hydrogeology, geology, lithology, physical geography, toponymy, soil sciences, hunting and game management, forestry, biological resources of the World Ocean and inland waters, history, archaeology, ethnography, aquaculture and fish farming, research methods and equipment. The Journal publishes reviews, check-lists of species and supplements to them, brief reports on rare natural phenomena, description of specially protected natural territories and waters in the Far East.