Computational Redox Potential Predictions: Applications to Inorganic and Organic Aqueous Complexes, and Complexes Adsorbed to Mineral Surfaces
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Status and Prospects of Organic Redox Flow Batteries Toward Sustainable Energy Storage Jian Luo,† Bo Hu,† Maowei Hu,† Yu Zhao,‡ and T
Review Cite This: ACS Energy Lett. 2019, 4, 2220−2240 http://pubs.acs.org/journal/aelccp Status and Prospects of Organic Redox Flow Batteries toward Sustainable Energy Storage Jian Luo,† Bo Hu,† Maowei Hu,† Yu Zhao,‡ and T. Leo Liu*,† † The Department of Chemistry and Biochemistry, Utah State University, Logan, Utah 84322, United States ‡ Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, College of Chemistry and Chemical Engineering, Ocean University of China, Qingdao 266100, China ABSTRACT: Redox flow batteries (RFBs) are regarded a promising technology for large-scale electricity energy storage to realize efficient utilization of intermittent renewable energy. Redox -active materials are the most important components in the RFB system because their physicochemical and electrochemical proper- ties directly determine their battery performance and energy storage cost. Designable, tunable, and potentially low-cost redox- active organic compounds are promising alternatives to traditional redox-active inorganic compounds for RFB applications. Herein, the representative designs of redox-active molecules, recent development of organic RFBs (ORFBs), and advantages/ disadvantages of different ORFB are reviewed. Especially the relationship between redox-active molecules’ physicochemical properties and their battery performance is discussed with an emphasis on the side reactions that cause fading of battery capacity. Finally, we provide an outlook on the development of high-performance ORFBs for practical energy storage -
Molecular Modeling of the Reduction Mechanism in the Citrate- Mediated Synthesis of Gold Nanoparticles Isaac Ojea-Jimeneź † and Josep M
Article pubs.acs.org/JPCC Molecular Modeling of the Reduction Mechanism in the Citrate- Mediated Synthesis of Gold Nanoparticles Isaac Ojea-Jimeneź † and Josep M. Campanera‡,* † Centre d’Investigacióen Nanociencià i Nanotecnologia (CIN2, ICN-CSIC), Campus UAB, 08193, Cerdanyola del Valles,̀ Spain ‡ Departament de Fisicoquímica, Facultat de Farmacia,̀ Universitat de Barcelona, Av. Joan XXIII, s/n, Diagonal Sud, 08028 Barcelona, Spain *S Supporting Information ABSTRACT: The synthesis of gold nanoparticles (Au NPs) via the reduction of tetrachloroauric acid by sodium citrate has become a standard procedure in nanotechnology. Simultaneously, gold- mediated reactions are gaining interest due to their catalytic properties, unseen in other metals. In this study, we have investigated the theoretical mechanism of this reaction under three different pH conditions (acid, mild acid, and neutral) and have corroborated our findings with experimental kinetic measurements by UV−vis absorption spectroscopy and transmission electron microscopy (TEM) analysis of the final particle morphology. We have demonstrated that, indeed, the pH of the medium ultimately determines the reaction rate of the reduction, which is the rate-limiting step in the Au NPs formation and involves decarboxylation of the citrate. The pH sets the dominant species of each of the reactants and, consequently, the reaction pathways slightly differ in each pH condition. The mechanism highlights the effect of the number of Cl− ligands in the metallocomplex, which ultimately originates the energetic -
Molecular Dynamics Simulations in Drug Discovery and Pharmaceutical Development
processes Review Molecular Dynamics Simulations in Drug Discovery and Pharmaceutical Development Outi M. H. Salo-Ahen 1,2,* , Ida Alanko 1,2, Rajendra Bhadane 1,2 , Alexandre M. J. J. Bonvin 3,* , Rodrigo Vargas Honorato 3, Shakhawath Hossain 4 , André H. Juffer 5 , Aleksei Kabedev 4, Maija Lahtela-Kakkonen 6, Anders Støttrup Larsen 7, Eveline Lescrinier 8 , Parthiban Marimuthu 1,2 , Muhammad Usman Mirza 8 , Ghulam Mustafa 9, Ariane Nunes-Alves 10,11,* , Tatu Pantsar 6,12, Atefeh Saadabadi 1,2 , Kalaimathy Singaravelu 13 and Michiel Vanmeert 8 1 Pharmaceutical Sciences Laboratory (Pharmacy), Åbo Akademi University, Tykistökatu 6 A, Biocity, FI-20520 Turku, Finland; ida.alanko@abo.fi (I.A.); rajendra.bhadane@abo.fi (R.B.); parthiban.marimuthu@abo.fi (P.M.); atefeh.saadabadi@abo.fi (A.S.) 2 Structural Bioinformatics Laboratory (Biochemistry), Åbo Akademi University, Tykistökatu 6 A, Biocity, FI-20520 Turku, Finland 3 Faculty of Science-Chemistry, Bijvoet Center for Biomolecular Research, Utrecht University, 3584 CH Utrecht, The Netherlands; [email protected] 4 Swedish Drug Delivery Forum (SDDF), Department of Pharmacy, Uppsala Biomedical Center, Uppsala University, 751 23 Uppsala, Sweden; [email protected] (S.H.); [email protected] (A.K.) 5 Biocenter Oulu & Faculty of Biochemistry and Molecular Medicine, University of Oulu, Aapistie 7 A, FI-90014 Oulu, Finland; andre.juffer@oulu.fi 6 School of Pharmacy, University of Eastern Finland, FI-70210 Kuopio, Finland; maija.lahtela-kakkonen@uef.fi (M.L.-K.); tatu.pantsar@uef.fi -
(1) Title: Gas-Phase Oxidation and Disproportionation of Nitric Oxide
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Community Repository of Fukui 1 Title (1) Title: Gas-phase oxidation and disproportionation of nitric oxide (2) Running title: Gas-phase oxidation and disproportionation of NO (3) Authors: Hirokazu Tsukahara*, Takanobu Ishida†, Mitsufumi Mayumi* *Department of Pediatrics, Faculty of Medicine, Fukui Medical University, Fukui 910-1193, Japan †Department of Chemistry, State University of New York at Stony Brook, New York 11794-3400, USA (4) Correspondence: Hirokazu Tsukahara, M.D., Ph.D. Department of Pediatrics, Faculty of Medicine, Fukui Medical University, Fukui 910-1193, Japan Telephone: 81-776-61-3111 (ex. 2316), FAX: 81-776-61-8129 E-mail: [email protected] 2 Introduction Nitrogen and oxygen together comprise over 98% of the air we breathe. Nitric oxide (NO) is a simple molecule, consisting of a single nitrogen bonded to one oxygen atom, which makes its chemistry accessible to study in great detail.1,2 However, it is only recently that mammalian cells were discovered to produce NO as a short-lived intercellular messenger.3,4 NO participates in blood pressure control, neurotransmission and inflammation. Moreover, NO is the biologically active species released from a variety of cardiovascular drugs such as nitroglycerin and isosorbide dinitrate.5 One important function of NO is in the macrophage-dependent killing of invaders, and possibly cancer cells, indicating the potential of this free radical to mediate cytotoxic and pathological effects.6 When inhaled, NO acts as a selective pulmonary vasodilator. There is intense clinical interest in inhalation of low doses of NO (less than 1 to 80 ppm) in the treatment of diseases characterized by pulmonary hypertension and hypoxemia (Table I).7,8 The inhaled NO therapy is fairly inexpensive, but it seems that it is not indicated for everybody with regards to the paradigm of its efficiency and potential toxicity. -
Disproportionation and Transalkylation of Alkylbenzenes Over Zeolite Catalysts
Applied Catalysis A: General 181 (1999) 355±398 Disproportionation and transalkylation of alkylbenzenes over zeolite catalysts Tseng-Chang Tsaia, Shang-Bin Liub, Ikai Wangc,* aRe®ning and Manufacturing Research Center, Chinese Petroleum Corporation, Chiayi 600, Taiwan bInstitute of Atomic and Molecular Sciences, Academia Sinica, PO Box 23-166, Taipei 106, Taiwan cDepartment of Chemical Engineering, National Tsing-Hua University, Hsinchu 300, Taiwan Received 13 June 1998; received in revised form 3 October 1998; accepted 5 November 1998 Abstract Disproportionation and transalkylation are important processes for the interconversion of mono-, di-, and tri-alkylbenzenes. In this review, we discuss the recent advances in process technology with special focus on improvements of para-isomer selectivity and catalyst stability. Extensive patent search and discussion on technology development are presented. The key criteria for process development are identi®ed. The working principles of para-isomer selectivity improvements involve the reduction of diffusivity and the inactivation of external surface. In conjunction with the fundamental research, various practical modi®cation aspects particularly the pre-coking and the silica deposition techniques, are extensively reviewed. The impact of para-isomer selective technology on process economics and product recovery strategy is discussed. Furthermore, perspective trends in related research and development are provided. # 1999 Elsevier Science B.V. All rights reserved. Keywords: Disproportionation; Transalkylation; -
Gas-Phase Boudouard Disproportionation Reaction Between Highly Vibrationally Excited CO Molecules
Chemical Physics 330 (2006) 506–514 www.elsevier.com/locate/chemphys Gas-phase Boudouard disproportionation reaction between highly vibrationally excited CO molecules Katherine A. Essenhigh, Yurii G. Utkin, Chad Bernard, Igor V. Adamovich *, J. William Rich Nonequilibrium Thermodynamics Laboratories, Department of Mechanical Engineering, The Ohio State University, Columbus, OH 43202, USA Received 3 September 2006; accepted 21 September 2006 Available online 30 September 2006 Abstract The gas-phase Boudouard disproportionation reaction between two highly vibrationally excited CO molecules in the ground elec- tronic state has been studied in optically pumped CO. The gas temperature and the CO vibrational level populations in the reaction region, as well as the CO2 concentration in the reaction products have been measured using FTIR emission and absorption spectroscopy. The results demonstrate that CO2 formation in the optically pumped reactor is controlled by the high CO vibrational level populations, rather than by CO partial pressure or by flow temperature. The disproportionation reaction rate constant has been determined from the measured CO2 and CO concentrations using the perfectly stirred reactor (PSR) approximation. The reaction activation energy, 11.6 ± 0.3 eV (close to the CO dissociation energy of 11.09 eV), was evaluated using the statistical transition state theory, by comparing the dependence of the measured CO2 concentration and of the calculated reaction rate constant on helium partial pressure. The dispro- À18 3 portionation reaction rate constant measured at the present conditions is kf =(9±4)· 10 cm /s. The reaction rate constants obtained from the experimental measurements and from the transition state theory are in good agreement. -
BENZENE Disclaimer
United States Office of Air Quality EPA-454/R-98-011 Environmental Protection Planning And Standards June 1998 Agency Research Triangle Park, NC 27711 AIR EPA LOCATING AND ESTIMATING AIR EMISSIONS FROM SOURCES OF BENZENE Disclaimer This report has been reviewed by the Office of Air Quality Planning and Standards, U.S. Environmental Protection Agency, and has been approved for publication. Mention of trade names and commercial products does not constitute endorsement or recommendation of use. EPA-454/R-98-011 ii TABLE OF CONTENTS Section Page LIST OF TABLES.....................................................x LIST OF FIGURES.................................................. xvi EXECUTIVE SUMMARY.............................................xx 1.0 PURPOSE OF DOCUMENT .......................................... 1-1 2.0 OVERVIEW OF DOCUMENT CONTENTS.............................. 2-1 3.0 BACKGROUND INFORMATION ...................................... 3-1 3.1 NATURE OF POLLUTANT..................................... 3-1 3.2 OVERVIEW OF PRODUCTION AND USE ......................... 3-4 3.3 OVERVIEW OF EMISSIONS.................................... 3-8 4.0 EMISSIONS FROM BENZENE PRODUCTION ........................... 4-1 4.1 CATALYTIC REFORMING/SEPARATION PROCESS................ 4-7 4.1.1 Process Description for Catalytic Reforming/Separation........... 4-7 4.1.2 Benzene Emissions from Catalytic Reforming/Separation .......... 4-9 4.2 TOLUENE DEALKYLATION AND TOLUENE DISPROPORTIONATION PROCESS ............................ 4-11 4.2.1 Toluene Dealkylation -
Frequency and Potential Dependence of Reversible Electrocatalytic Hydrogen Interconversion by [Fefe]-Hydrogenases
Frequency and potential dependence of reversible electrocatalytic hydrogen interconversion by [FeFe]-hydrogenases Kavita Pandeya,b, Shams T. A. Islama, Thomas Happec, and Fraser A. Armstronga,1 aInorganic Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford OX1 3QR, United Kingdom; bSchool of Solar Energy, Pandit Deendayal Petroleum University, Gandhinagar 382007, Gujarat, India; and cAG Photobiotechnologie Ruhr–Universität Bochum, 44801 Bochum, Germany Edited by Thomas E. Mallouk, The Pennsylvania State University, University Park, PA, and approved March 2, 2017 (received for review December 5, 2016) The kinetics of hydrogen oxidation and evolution by [FeFe]- CrHydA1 contains only the H cluster: in the living cell, it receives hydrogenases have been investigated by electrochemical imped- electrons from photosystem I via a small [2Fe–2S] ferredoxin ance spectroscopy—resolving factors that determine the excep- known as PetF (19). No accessory internal Fe–S clusters are tional activity of these enzymes, and introducing an unusual and present to mediate or store electrons. powerful way of analyzing their catalytic electron transport prop- For enzymes, PFE has focused entirely on net catalytic electron erties. Attached to an electrode, hydrogenases display reversible flow that is observed as direct current (DC) in voltammograms + electrocatalytic behavior close to the 2H /H2 potential, making (2, 3, 10). Use of DC cyclic voltammetry as opposed to single them paradigms for efficiency: the electrocatalytic “exchange” rate potential sweeps alone helps to distinguish rapid, steady-state (measured around zero driving force) is therefore an unusual pa- catalytic activity at different potentials from relatively slow, rameter with theoretical and practical significance. Experiments potential-dependent changes in activity that are revealed as were carried out on two [FeFe]-hydrogenases, CrHydA1 from the hysteresis (10). -
Density Functional Theory for Protein Transfer Free Energy
Density Functional Theory for Protein Transfer Free Energy Eric A Mills, and Steven S Plotkin∗ Department of Physics & Astronomy, University of British Columbia, Vancouver, British Columbia V6T1Z4 Canada E-mail: [email protected] Phone: 1 604-822-8813. Fax: 1 604-822-5324 arXiv:1310.1126v1 [q-bio.BM] 3 Oct 2013 ∗To whom correspondence should be addressed 1 Abstract We cast the problem of protein transfer free energy within the formalism of density func- tional theory (DFT), treating the protein as a source of external potential that acts upon the sol- vent. Solvent excluded volume, solvent-accessible surface area, and temperature-dependence of the transfer free energy all emerge naturally within this formalism, and may be compared with simplified “back of the envelope” models, which are also developed here. Depletion contributions to osmolyte induced stability range from 5-10kBT for typical protein lengths. The general DFT transfer theory developed here may be simplified to reproduce a Langmuir isotherm condensation mechanism on the protein surface in the limits of short-ranged inter- actions, and dilute solute. Extending the equation of state to higher solute densities results in non-monotonic behavior of the free energy driving protein or polymer collapse. Effective inter- action potentials between protein backbone or sidechains and TMAO are obtained, assuming a simple backbone/sidechain 2-bead model for the protein with an effective 6-12 potential with the osmolyte. The transfer free energy dg shows significant entropy: d(dg)=dT ≈ 20kB for a 100 residue protein. The application of DFT to effective solvent forces for use in implicit- solvent molecular dynamics is also developed. -
Kinetic Investigation of Catalytic Disproportionation of Superoxide Ions in the Non- Aqueous Electrolyte Used in Li-Air Batteries
BNL-107735-2015-JA Kinetic Investigation of Catalytic Disproportionation of Superoxide Ions in the Non- aqueous Electrolyte used in Li-Air Batteries Qiang Wang1, Dong Zheng1, Meaghan E. McKinnon1 Xiao-Qing Yang2 and Deyang Qu* 1 1, Department of chemistry, University of Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125 USA 2, Chemistry Department, Brookhaven National Laboratory, Upton, NY, 11973, USA 22 Abstract Superoxide reacts with carbonate solvents in Li-air batteries. Tris(pentafluorophenyl)borane is - found to catalyse a more rapid superoxide (O2 ) disproportionation reaction than the reaction between superoxide and propylene carbonate (PC). With this catalysis, the negative impact of the - reaction between the electrolyte and O2 produced by the O2 reduction can be minimized. A simple kinetic study using ESR spectroscopy was reported to determine reaction orders and rate constants for the reaction between PC and superoxide, and the disproportionation of superoxide catalyzed by Tris(pentafluorophenyl)borane and Li ions. The reactions are found to be first order and the rate constants are 0.033 s-1M-1, 0.020 s-1M-1 and 0.67 s-1M-1 for reactions with PC, Li ion and Tris(pentafluorophenyl)borane, respectively. Keywords: superoxide disproportionation; Lewis Acid Catalyst; Li-air battery; reaction rate constant. 1 Introduction: Li-O2 battery chemistry has aroused significant interests due to its high theoretical specific capacity, which far exceeds state-of-art Li-ion batteries, due to the cathode active material (O2) being abundant in the air. However, before Li-air chemistry becomes applicable, there are many * Corresponding author: Tel: +1 617 287 6035; Fax: +1 617 287 6185: e-mail: [email protected] 1 technical obstacles that need to be addressed. -
"Relationships Between Oxidation-Reduction Potential
Relationships between Oxidation-Reduction Potential, Oxidant, and pH in Drinking Water Cheryl N. James3, Rachel C. Copeland2, and Darren A. Lytle1 1U.S. Environmental Protection Agency, NRMRL, Cincinnati, OH 2University of Cincinnati, Department of Environmental Engineering, Cincinnati, OH 3University of Cincinnati, Department of Chemical Engineering, Cincinnati, OH Abstract –Oxidation and reduction (redox) reactions are very important in drinking water. Oxidation-reduction potential (ORP) measurements reflect the redox state of water. Redox measurements are not widely made by drinking water utilities in part because they are not well understood. The objective of this study was to determine the effect of oxidant type and concentration on the ORP of carbonate buffered water as a function of pH. Oxidants that were studied included: chlorine, monochloramine, potassium permanganate, chlorine dioxide, and oxygen. ORP decreased with increasing pH, regardless of the oxidant type or concentration. ORP increased rapidly with increasing oxidant dosage, particularly at lower concentrations. Differences in the redox potentials of different oxidant systems were also observed. Waters that contained chlorine and chlorine dioxide had the highest ORPs. Tests also revealed that there were inconsistencies with redox electrode measurements. In the standard Zobell reference solution, two identical redox electrodes had nearly the same reading, but in test waters the readings sometimes showed a variation as great as 217.7 mV. Key words: ORP, redox potential, redox chemistry, oxidant, drinking water 1.0 BACKGROUND 1.1 Redox Theory Oxidation-reduction (redox) reactions describe the transfer of electrons between atoms, molecules, or ions. Oxidation and reduction reactions occur simultaneously and together make up an electrochemical couple. -
Comparative Study of Implicit and Explicit Solvation Models for Probing Tryptophan Side Chain Packing in Proteins†
828 Bull. Korean Chem. Soc. 2012, Vol. 33, No. 3 Changwon Yang and Youngshang Pak http://dx.doi.org/10.5012/bkcs.2012.33.3.828 Comparative Study of Implicit and Explicit Solvation Models for Probing Tryptophan Side Chain Packing in Proteins† Changwon Yang and Youngshang Pak* Department of Chemistry and Institute of Functional Materials, Pusan National University, Busan 609-735, Korea *E-mail: [email protected] Received November 10, 2011, Accepted December 29, 2011 We performed replica exchange molecular dynamics (REMD) simulations of the tripzip2 peptide (beta- hairpin) using the GB implicit and TI3P explicit solvation models. By comparing the resulting free energy surfaces of these two solvation model, we found that the GB solvation model produced a distorted free energy map, but the explicit solvation model yielded a reasonable free energy landscape with a precise location of the native structure in its global free energy minimum state. Our result showed that in particular, the GB solvation model failed to describe the tryptophan packing of trpzip2, leading to a distorted free energy landscape. When the GB solvation model is replaced with the explicit solvation model, the distortion of free energy shape disappears with the native-like structure in the lowest free energy minimum state and the experimentally observed tryptophan packing is precisely recovered. This finding indicates that the main source of this problem is due to artifact of the GB solvation model. Therefore, further efforts to refine this model are needed for better predictions of various aromatic side chain packing forms in proteins. Key Words : Replica exchange molecular dynamics simulation, Implicit solvation model, Tryptophan side chain packing, Protein folding Introduction develop a transferable all-atom protein force field with the GBSA model, so that free energy based native structure Developments of efficient simulation strategies in con- predictions of diverse structural motifs become feasible at junction with all-atom force fields have provided an the all-atom resolution.