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Karyotype and Genome Size Determination of Jarilla Chocola, an Additional Sister Clade of Carica Papaya
POJ 14(01):50-56 (2021) ISSN:1836-3644 doi: 10.21475/POJ.14.01.21.p2944 Karyotype and genome size determination of Jarilla chocola, an additional sister clade of Carica papaya Dessireé Patricia Zerpa-Catanho1, Tahira Jatt2, Ray Ming1* 1Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA 2Department of Botany, Shah Abdul Latif University, Khaipur, Sindh, 66020, Pakistan *Corresponding author: [email protected] Abstract Jarilla chocola is an herbaceous plant species that belongs to the Jarilla genus and the Caricaceae family. No information on chromosome number or genome size has been reported for J. chocola that confirms the occurrence of dysploidy events and explore the existence of heteromorphic sex chromosomes. Therefore, the total number of chromosomes of this species was determined by karyotyping and counting the number of chromosomes observed, and the genome size of female and male plants was estimated separately by flow cytometry. Results showed that J. chocola has eight pairs of chromosomes (2n = 2x = 16), and its chromosomes are classified as metacentric for five pairs, submetacentric for two pairs and telocentric for one pair. The nuclear DNA content (1C- value) in picograms and diploid genome size was estimated separately from female and male plants using two species as the standards, Phaseolus vulgaris (1C = 0.60 pg) and Carica papaya (1C = 0.325 pg), to look for the possible existence of heteromorphic sex chromosomes. C. papaya proved to be a better standard for the determination of J. chocola DNA content and diploid genome size. No significant difference on the DNA content was observed between female (1C = 1.02 ± 0.003 pg) and male (1C = 1.02 ± 0.008 pg) plants. -
Morphological Variation in the Flowers of Jacaratia
Plant Biology ISSN 1435-8603 RESEARCH PAPER Morphological variation in the flowers of Jacaratia mexicana A. DC. (Caricaceae), a subdioecious tree A. Aguirre1, M. Vallejo-Marı´n2, E. M. Piedra-Malago´ n3, R. Cruz-Ortega4 & R. Dirzo5 1 Departamento de Biologı´a Evolutiva, Instituto de Ecologı´a A.C., Congregacio´ n El Haya, Xalapa, Veracruz, Me´ xico 2 Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada 3 Posgrado Instituto de Ecologı´a A.C., Congregacio´ n El Haya, Xalapa, Veracruz, Me´ xico 4 Departamento de Ecologı´a Funcional, Instituto de Ecologı´a, UNAM, Me´ xico 5 Department of Biological Sciences, Stanford University, Stanford, CA, USA Keywords ABSTRACT Caricaceae; dioecy; Jacaratia mexicana; Mexico; sexual variation. The Caricaceae is a small family of tropical trees and herbs in which most species are dioecious. In the present study, we extend our previous work on Correspondence dioecy in the Caricaceae, characterising the morphological variation in sex- A. Aguirre, Departamento de Biologı´a ual expression in flowers of the dioecious tree Jacaratia mexicana. We found Evolutiva, Instituto de Ecologı´a A.C., Km. 2.5 that, in J. mexicana, female plants produce only pistillate flowers, while Carretera Antigua a Coatepec 351, male plants are sexually variable and can bear three different types of flow- Congregacio´ n El Haya, Xalapa 91070, ers: staminate, pistillate and perfect. To characterise the distinct types of Veracruz, Me´ xico. flowers, we measured 26 morphological variables. Our results indicate that: E-mail: [email protected] (i) pistillate flowers from male trees carry healthy-looking ovules and are morphologically similar, although smaller than, pistillate flowers on female Editor plants; (ii) staminate flowers have a rudimentary, non-functional pistil and M. -
Marker-Assisted Breeding for Papaya Ringspot Virus Resistance in Carica Papaya L
Marker-Assisted Breeding for Papaya Ringspot Virus Resistance in Carica papaya L. Author O'Brien, Christopher Published 2010 Thesis Type Thesis (Masters) School Griffith School of Environment DOI https://doi.org/10.25904/1912/3639 Copyright Statement The author owns the copyright in this thesis, unless stated otherwise. Downloaded from http://hdl.handle.net/10072/365618 Griffith Research Online https://research-repository.griffith.edu.au Marker-Assisted Breeding for Papaya Ringspot Virus Resistance in Carica papaya L. Christopher O'Brien BAppliedSc (Environmental and Production Horticulture) University of Queensland Griffith School of Environment Science, Environment, Engineering and Technology Griffith University Submitted in fulfilment of the requirements of the degree of Master of Philosophy September 4, 2009 2 Table of Contents Page No. Abstract ……………………………………………………… 11 Statement of Originality ………………………………………........ 13 Acknowledgements …………………………………………. 15 Chapter 1 Literature review ………………………………....... 17 1.1 Overview of Carica papaya L. (papaya)………………… 19 1.1.1 Taxonomy ………………………………………………… . 19 1.1.2 Origin ………………………………………………….. 19 1.1.3 Botany …………………………………………………… 20 1.1.4 Importance …………………………………………………... 25 1.2 Overview of Vasconcellea species ……………………… 28 1.2.1 Taxonomy …………………………………………………… 28 1.2.2 Origin ……………………………………………………… 28 1.2.3 Botany ……………………………………………………… 31 1.2.4 Importance …………………………………………………… 31 1.2.5 Brief synopsis of Vasconcellea species …………………….. 33 1.3 Papaya ringspot virus (PRSV-P)…………………………. 42 1.3.1 Overview ………………………………………………………. 42 1.3.2 Distribution …………………………………………………… 43 1.3.3 Symptoms and effects ……………………………………….. .. 44 1.3.4 Transmission …………………………………………………. 45 1.3.5 Control ………………………………………………………. .. 46 1.4 Breeding ………………………………………………………. 47 1.4.1 Disease resistance …………………………………………….. 47 1.4.2 Biotechnology………………………………………………….. 50 1.4.3 Intergeneric hybridisation…………………………………….. 51 1.4.4 Genetic transformation………………………………………… 54 1.4.5 DNA analysis ………………………………………………..... -
(Carica Papaya L.) Biology and Biotechnology
Tree and Forestry Science and Biotechnology ©2007 Global Science Books Papaya (Carica papaya L.) Biology and Biotechnology Jaime A. Teixeira da Silva1* • Zinia Rashid1 • Duong Tan Nhut2 • Dharini Sivakumar3 • Abed Gera4 • Manoel Teixeira Souza Jr.5 • Paula F. Tennant6 1 Kagawa University, Faculty of Agriculture, Department of Horticulture, Ikenobe, 2393, Miki-cho, Kagawa, 761-0795, Japan 2 Plant Biotechnology Department, Dalat Institute of Biology, 116 Xo Viet Nghe Tinh, Dalat, Lamdong, Vietnam 3 University of Pretoria, Postharvest Technology Group, Department of Microbiology and Plant Pathology, Pretoria, 0002, South Africa 4 Department of Virology, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel 5 Embrapa LABEX Europa, Plant Research International (PRI), Wageningen University & Research Centre (WUR), Wageningen, The Netherlands 6 Department of Life Sciences, University of the West Indies, Mona, Kingston 7, Jamaica Corresponding author : * [email protected] ABSTRACT Papaya (Carica papaya L.) is a popular and economically important fruit tree of tropical and subtropical countries. The fruit is consumed world-wide as fresh fruit and as a vegetable or used as processed products. This review focuses primarily on two aspects. Firstly, on advances in in vitro methods of propagation, including tissue culture and micropropagation, and secondly on how these advances have facilitated improvements in papaya genetic transformation. An account of the dietary and nutritional composition of papaya, how these vary with culture methods, and secondary metabolites, both beneficial and harmful, and those having medicinal applications, are dis- cussed. An overview of papaya post-harvest is provided, while ‘synseed’ technology and cryopreservation are also covered. This is the first comprehensive review on papaya that attempts to integrate so many aspects of this economically and culturally important fruit tree that should prove valuable for professionals involved in both research and commerce. -
Unearthing Belowground Bud Banks in Fire-Prone Ecosystems
Unearthing belowground bud banks in fire-prone ecosystems 1 2 3 Author for correspondence: Juli G. Pausas , Byron B. Lamont , Susana Paula , Beatriz Appezzato-da- Juli G. Pausas 4 5 Glo'ria and Alessandra Fidelis Tel: +34 963 424124 1CIDE-CSIC, C. Naquera Km 4.5, Montcada, Valencia 46113, Spain; 2Department of Environment and Agriculture, Curtin Email [email protected] University, PO Box U1987, Perth, WA 6845, Australia; 3ICAEV, Universidad Austral de Chile, Campus Isla Teja, Casilla 567, Valdivia, Chile; 4Depto Ci^encias Biologicas,' Universidade de Sao Paulo, Av P'adua Dias 11., CEP 13418-900, Piracicaba, SP, Brazil; 5Instituto de Bioci^encias, Vegetation Ecology Lab, Universidade Estadual Paulista (UNESP), Av. 24-A 1515, 13506-900 Rio Claro, Brazil Summary To be published in New Phytologist (2018) Despite long-time awareness of the importance of the location of buds in plant biology, research doi: 10.1111/nph.14982 on belowground bud banks has been scant. Terms such as lignotuber, xylopodium and sobole, all referring to belowground bud-bearing structures, are used inconsistently in the literature. Key words: bud bank, fire-prone ecosystems, Because soil efficiently insulates meristems from the heat of fire, concealing buds below ground lignotuber, resprouting, rhizome, xylopodium. provides fitness benefits in fire-prone ecosystems. Thus, in these ecosystems, there is a remarkable diversity of bud-bearing structures. There are at least six locations where belowground buds are stored: roots, root crown, rhizomes, woody burls, fleshy -
United States Environmental Protection Agency Washington, D.C
UNITED STATES ENVIRONMENTAL PROTECTION AGENCY WASHINGTON, D.C. 20460 OFFICE OF CHEMICAL SAFETY AND POLLUTION PREVENTION MEMORANDUM DATE: March 1, 2013 SUBJECT: Crop Grouping – Part X: Analysis of the USDA IR-4 Petition to Amend the Crop Group Regulation 40 CFR § 180.41 (c) (25) and Commodity Definitions [40 CFR 180.1 (g)] Related to the Proposed Crop Group 23 Tropical and Subtropical Fruit – Edible Peel. PC Code: NA DP Barcode: NA Decision No.: NA Registration No.: NA Petition No.: NA Regulatory Action: Crop Grouping Regulation Risk Assessment Type: None Case No.: NA TXR No.: NA CAS No.: NA MRID No.: 482971-01 40 CFR: 180.41 (c) (25) and 180.1 (g) FROM: Bernard A. Schneider, Ph.D., Senior Plant Physiologist Chemistry and Exposure Branch Health Effects Division (7509P) THROUGH: Donna Davis and Donald Wilbur, Ph.D., Chairpersons HED Chemistry Science Advisory Council (ChemSAC) Health Effects Division (7509P) TO: Barbara Madden, Minor Use Officer Risk Integration, Minor Use, and Emergency Response Branch (RIMUERB) Registration Division (7505P) cc: IR-4 Project, Bill Barney, Jerry Baron, Dan Kunkel, Debbie Carpenter, Van Starner 2 ACTION REQUESTED: William P. Barney, Crop Grouping Project Coordinator, and Kathryn Homa, Assistant Coordinator, USDA Interregional Research Project No. 4 (IR-4), State Agricultural Experiment Station, Rutgers University has submitted a petition (November 16, 2010) on behalf of the IR-4 Project, and the Tropical Fruits Workgroup of the International Crop Grouping Consulting Committee (ICGCC) to establish a new Crop Group (40 CFR § 180.41) Crop Group 23, Tropical and Subtropical Fruit – Edible Peel Group, and propose addition of Commodity Definitions 40 CFR 180.1 (g). -
Potential Geographical Distribution of Papaya Wild Cultivated in Mexico Abstract
Revista Mexicana de Ciencias Agrícolas volume 9 number 7 September 28 - November 11, 2018 Article Potential geographical distribution of papaya wild cultivated in Mexico Edgar Espinosa Trujillo1 Alfredo Josué Gámez Vázquez2 Miguel Angel Avila Perches2 Francisco Palemón Alberto3 Jesus Hernández Ruiz1§ 1University of Guanajuato-Division of Life Sciences. Highway Irapuato-Silao km 9, Exhacienda El Copal, Irapuato, Guanajuato, Mexico. CP 36500. ([email protected]). 2Bajío Experimental Field-INIFAP. Road Celaya-San Miguel de Allende km 6.5, Celaya, Guanajuato, Mexico. CP 38110. Tel. 01(800) 0882222, ext. 85220 and 85228. ([email protected]; [email protected]). 3Faculty of Agricultural and Environmental Sciences-Universidad Autónoma de Guerrero. Periferico Poniente s/n, Iguala de la Independencia, Guerrero. CP. 40000. ([email protected]). §Corresponding author: [email protected]. Abstract The wild populations of papaya (Carica papaya L.) integrate a biological resource for the genetic improvement of the species. The prediction of the geographical distribution of wild and cultivated populations is a useful tool to determine collection sites for their use and conservation. With the objective of estimating the potential distribution of papaya in Mexico, a database with geo- reference information of wild and cultivated papaya individuals was elaborated, then the maximum entropy algorithm (MaxEnt) was applied with 22 bioclimatic variables as predictors. The total area of potential distribution of the wild specimens was 114 546.5 km2, the high potential areas were located in the Gulf of Mexico (south of Veracruz, Tabasco, Campeche) and on the coast of Chiapas. The cultivated papaya presented a high potential distribution in three zones: south of Veracruz, coast of Chiapas and north of Guerrero, forming 185 396.9 km2. -
Molecular Phylogeny, Biogeography and an E- Monograph of the Papaya Family (Caricaceae) As an Example of Taxonomy in the Electronic Age
springer.com Fernanda Antunes Carvalho Molecular Phylogeny, Biogeography and an e- Monograph of the Papaya Family (Caricaceae) as an Example of Taxonomy in the Electronic Age 2015, XIV, 147 p. 24 illus. Study in the field of natural sciences Fernanda Antunes Carvalho addresses an issue of key importance to the field of systematics, Printed book namely how to foster taxonomic work and the dissemination of scientific knowledge about Softcover species by taking full advantage of electronic data and bioinformatics tools. The first part 99,99 € | £89.99 | $119.99 focuses on the development of an electronic monograph of the papaya family (Caricaceae) [1]106,99 € (D) | 109,99 € (A) | CHF using existing infrastructures of Information Technology (IT) and bioinformatic tools that 118,00 together set the stage for a new era of systematics. Based on the plastid and nuclear DNA data, the author inferred historical processes in the second part that may have shaped the eBook evolution of the Caricaceae and explain their current geographic distribution. The last part is 85,59 € | £71.50 | $89.00 dedicated to the evolution of chromosome numbers in the Caricaceae and includes counts for [2]85,59 € (D) | 85,59 € (A) | CHF species from three genera (Cylicomorpha, Horovitzia, Jarilla) that have never been investigated 94,00 before. Available from your library or springer.com/shop MyCopy [3] Printed eBook for just € | $ 24.99 springer.com/mycopy Error[en_EN | Export.Bookseller. MediumType | SE] Order online at springer.com / or for the Americas call (toll free) 1-800-SPRINGER / or email us at: [email protected]. -
Pollen Morphology in Selected Species of Caricaceae with Special Reference to Novel Palynological Characters
Botany Pollen morphology in selected species of Caricaceae with special reference to novel palynological characters Journal: Botany Manuscript ID cjb-2017-0125.R1 Manuscript Type: Article Date Submitted by the Author: 21-Sep-2017 Complete List of Authors: Zini, Lucía; Instituto de Botanica del Nordeste, Carrera, Constanza; Consejo Nacional de Investigaciones Científicas y Técnicas; Instituto de Fisiología y Recursos Genéticos Vegetales INTA-CIAP Lattar, Elsa;Draft Cátedra de Morfología de Plantas Vasculares, Facultad de Ciencias Agrarias, Universidad del Nordeste Ferrucci, María Silvia; Instituto de Botanica del Nordeste Is the invited manuscript for consideration in a Special N/A Issue? : Keyword: Caricaceae, Carica, Jacaratia, Vasconcellea, Palynology https://mc06.manuscriptcentral.com/botany-pubs Page 1 of 25 Botany Pollen morphology in selected species of Caricaceae with special reference to novel palynological characters Lucía Melisa Zini 1,2, * , Constanza Soledad Carrera 2,4, Elsa Clorinda Lattar 1,3 and María Silvia Ferrucci 1,2,3 1IBONE-UNNE-CONICET. Corrientes, Argentina, Sargento Cabral N° 2131, 3400. 2 Consejo Nacional de Investigaciones Científicas y Técnicas. 3 Cátedra de Morfología de Plantas Vasculares, Facultad de Ciencias Agrarias, Universidad del Nordeste. Corrientes, Argentina, Sargento Cabral N° 2131, 3400. 4 Instituto de Fisiología y Recursos Genéticos Vegetales INTA-CIAP, Córdoba, Argentina, 11 de Septiembre 4755 (X5020ICA). Draft * Corresponding autor: Lucía Melisa Zini 1,2 (Sargento Cabral N° 2131, 3400, Corrientes, Argentina, email: [email protected]) Constanza Soledad Carrera 2,4 (11 de Septiembre 4755, Córdoba, Argentina, email: [email protected] ), Elsa Clorinda Lattar 1,3 (Sargento Cabral N° 2131, 3400, Corrientes, Argentina, email: [email protected] ) María Silvia Ferrucci 1,2,3 (Sargento Cabral N° 2131, 3400, Corrientes, Argentina, email: [email protected]). -
Hepatoprotective Effect of Mountain Papaya (Vasconcellea Pubescens A.DC.) Fruit Extract Against Acetaminophen-Induced Acute Liver Damage
Hepatoprotective Effect of Mountain Papaya (Vasconcellea pubescens A.DC.) Fruit Extract against Acetaminophen-Induced Acute Liver Damage Heru Sasongko*1,2, Diah Pratiwi1, Trias Amartiwi1, Nur Rohman Efendi1 and Sugiyarto2 1Department of Pharmacy Faculty of Mathematics and Natural Sciences Universitas Sebelas Maret. Jl. Ir. Sutami 36A Surakarta 57126, Central Java Indonesia 2Department of Biology Faculty of Mathematics and Natural Sciences Universitas Sebelas Maret. Jl. Ir. Sutami 36A Surakarta 57126, Central Java Indonesia Keywords: acetaminophen, hepatoprotective, mountain papaya, flavonoid, Vasconcellea pubescens Abstract: The liver is a main organ of drugs metabolism in humans. Many studies have reported that acetaminophen has an effect on liver injury. Targeting mitochondrial oxidant stress is a promising therapeutic option for acetaminophen hepatotoxicity. Previous study has shown that mountain papaya (Vasconcellea pubescens A.DC.) fruit has an effect against lipid peroxidation activity. This research aims to know the hepatoprotective effect of mountain papaya fruit ethanolic extract (MPFE) in rats after induced by acetaminophen. The rats were divided into six groups, with group I not administered with any treatment, group II administered with suspension of 0.25% CMC-Na as negative control, group III was administered with suspension of silymarin as positive control. Groups IV, V, and VI were given MPFE with variation doses 120; 240 and 480 mg/kg body weight for 14 days. At day 14th, all groups except the normal group were induced with acetaminophen in toxic dose (2 g/kg body weight). The liver injury was measured by ALT, AST, bilirubin, ALP value and liver histology profile. The results showed that MPFE could significantly decrease liver cell injury (p <0.05) by ALT, AST and liver histology profile parameters in which each dose has the same ability. -
Evidence for Emergence of Sex-Determining Gene(S) in a Centromeric Region in Vasconcellea Parviflora
Genetics: Early Online, published on December 5, 2014 as 10.1534/genetics.114.173021 Evidence for emergence of sex-determining gene(s) in a centromeric region in Vasconcellea parviflora Marina Iovene1,2, Qingyi Yu3, Ray Ming4, and Jiming Jiang1,* 1 Department of Horticulture, University of Wisconsin, Madison, Wisconsin 53706, USA 2 CNR–Institute of Biosciences and BioResouces (IBBR), Bari 70126, Italy 3 Department of Plant Pathology & Microbiology, Texas A&M AgriLife Research Center, Texas A&M University System, Dallas, TX 75252, USA 4 Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA _____________________________________________________ *Corresponding author; e-mail: [email protected] - 1 - Copyright 2014. Abstract Sex chromosomes have been studied in many plant and animal species. However, few species are suitable as models to study the evolutionary histories of sex chromosomes. We previously demonstrated that papaya (Carica papaya) (2n=2x=18), a fruit tree in the family Caricaceae, contains recently emerged but cytologically heteromorphic X/Y chromosomes. We have been intrigued by the possible presence and evolution of sex chromosomes in other dioecious Caricaceae species. We selected a set of 22 bacterial artificial chromosome (BAC) clones that are distributed along the papaya X/Y chromosomes. These BACs were mapped to the meiotic pachytene chromosomes of Vasconcellea parviflora (2n=2x=18), a species that diverged from papaya ~27 million years ago. We demonstrate that V. parviflora contains a pair of heteromorphic X/Y chromosomes that are homologous to the papaya X/Y chromosomes. The comparative mapping results revealed that the male-specific regions of the Y chromosomes (MSYs) probably initiated near the centromere of the Y chromosomes in both species. -
Sex Determination on Vasconcellea Pubescens A.DC in Java, Indonesia
Local Knowledge: Sex Determination on Vasconcellea Pubescens A.DC in Java, Indonesia Ainun Nikmati Laily1, Purnomo2, Budi Setiadi Daryono3 and Aziz Purwantoro4 {[email protected]} Faculty of Biology, Gadjah Mada University Jl. Teknika Selatan, Senolowo, Sinduadi, Mlati, Sleman, Yogyakarta Abstract. Vasconcellea pubescens A. DC. is a fruit commodity that has the potential to be researched and developed This plant is the only member of the Family Caricaceae found in Indonesia There are 3 areas in Java that are overgrown with this plant: Dieng Plateau, Bromo, and Cangar-Batu with an altitude of 1500 - 2400 above sea level around the volcano area However, plants are known to have a variety of flower expressions in different trees It is necessary to know the determination of sex as an efficient effort inbreeding This research is a descriptive exploratory study with survey methods, semi- structured interviews and strengthened by a questionnaire. Retrieval of data in this study using a simple random technique. Utilization of plants as sweets and as fresh fruit for direct consumption. The utilization of plant organs includes ripe fruit and seeds. The knowledge of the local community regarding the determination of sex in this plant is still limited. Keywords: Local knowledge; Sex determination; Vasconcellea pubescens A.DC., Java, Indonesia 1 Introduction Vasconcellea pubescens A. DC. or "karika" or "mountain papaya" are plants originating from tropical America precisely from the highlands of the Andes, South America. This plant was introduced to Indonesia in the period before World War II by the Dutch East Indies colonial government and was successfully developed in the Dieng Plateau.