Panonychus Citri (Mcgregor, 1916)
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Bajda et al. BMC Genomics (2015) 16:974 DOI 10.1186/s12864-015-2157-1 RESEARCH ARTICLE Open Access Transcriptome profiling of a spirodiclofen susceptible and resistant strain of the European red mite Panonychus ulmi using strand-specific RNA-seq Sabina Bajda1†, Wannes Dermauw2*† , Robert Greenhalgh3, Ralf Nauen4, Luc Tirry2, Richard M. Clark3,5 and Thomas Van Leeuwen1,2* Abstract Background: The European red mite, Panonychus ulmi, is among the most important mite pests in fruit orchards, where it is controlled primarily by acaricide application. However, the species rapidly develops pesticide resistance, and the elucidation of resistance mechanisms for P. ulmi has not kept pace with insects or with the closely related spider mite Tetranychus urticae. The main reason for this lack of knowledge has been the absence of genomic resources needed to investigate the molecular biology of resistance mechanisms. Results: Here, we provide a comprehensive strand-specific RNA-seq based transcriptome resource for P. ulmi derived from strains susceptible and resistant to the widely used acaricide spirodiclofen. From a de novo assembly of the P. ulmi transcriptome, we manually annotated detoxification enzyme families, target-sites of commonly used acaricides, and horizontally transferred genes implicated in plant-mite interactions and pesticide resistance. In a comparative analysis that incorporated sequences available for Panonychus citri, T. urticae, and insects, we identified radiations for detoxification gene families following the divergence of Panonychus and Tetranychus genera. Finally, we used the replicated RNA-seq data from the spirodiclofen susceptible and resistant strains to describe gene expression changes associated with resistance. A cytochrome P450 monooxygenase, as well as multiple carboxylcholinesterases, were differentially expressed between the susceptible and resistant strains, and provide a molecular entry point for understanding resistance to spirodiclofen, widely used to control P. -
Behavioral Response of Panonychus Citri (Mcgregor) (Acari: Tetranychidae) to Synthetic Chemicals and Oils
Behavioral response of Panonychus citri (McGregor) (Acari: Tetranychidae) to synthetic chemicals and oils Muhammad Asif Qayyoum1,2,*, Zi-Wei Song1,*, Bao-Xin Zhang1, Dun-Song Li1 and Bilal Saeed Khan3 1 Guangdong Provincial Key Laboratory of High Technology for Plant Protection/Plant Protection Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou City, Guangdong, China 2 Department of Plant Protection, Ghazi University, Dera Ghazi Khan, Dera Ghazi Khan, Punjab, Pakistan 3 Department of Entomology, University of Agriculture Faisalabad, Faisalabad, Punjab, Pakistan * These authors contributed equally to this work. ABSTRACT Background: Panonychus citri (McGregor) (Acari: Tetranychidae) population outbreaks after the citrus plantation’s chemical application is a common observation. Dispersal behavior is an essential tool to understand the secondary outbreak of P. citri population. Therefore, in the current study, the dispersal activity of P. citri was observed on the leaf surfaces of Citrus reticulata (Rutaceae) treated with SYP-9625, abamectin, vegetable oil, and EnSpray 99. Method: Mites were released on the first (apex) leaf of the plant (adaxial surface) and data were recorded after 24 h. The treated, untreated, and half-treated data were analyzed by combining the leaf surfaces (adaxial right, adaxial left, abaxial right, and abaxial left). All experiments were performed in open-air environmental conditions. Results: The maximum number of mites was captured on the un-treated or half-treated surfaces due to chemicals repellency. Chemical bioassays of the free-choice test showed that all treatments significantly increased the mortality of Submitted 10 September 2020 P. citri depending on application method and concentration. A significant number 13 January 2021 Accepted of mites repelled away from treated surfaces and within treated surfaces except Published 5 April 2021 adaxial left and abaxial right surfaces at LC30. -
(Acari: Tetranychidae): High Genome Rearrangement and Extremely Truncated Trnas Ming-Long Yuan, Dan-Dan Wei, Bao-Jun Wang, Wei Dou, Jin-Jun Wang*
Yuan et al. BMC Genomics 2010, 11:597 http://www.biomedcentral.com/1471-2164/11/597 RESEARCH ARTICLE Open Access The complete mitochondrial genome of the citrus red mite Panonychus citri (Acari: Tetranychidae): high genome rearrangement and extremely truncated tRNAs Ming-Long Yuan, Dan-Dan Wei, Bao-Jun Wang, Wei Dou, Jin-Jun Wang* Abstract Background: The family Tetranychidae (Chelicerata: Acari) includes ~1200 species, many of which are of agronomic importance. To date, mitochondrial genomes of only two Tetranychidae species have been sequenced, and it has been found that these two mitochondrial genomes are characterized by many unusual features in genome organization and structure such as gene order and nucleotide frequency. The scarcity of available sequence data has greatly impeded evolutionary studies in Acari (mites and ticks). Information on Tetranychidae mitochondrial genomes is quite important for phylogenetic evaluation and population genetics, as well as the molecular evolution of functional genes such as acaricide-resistance genes. In this study, we sequenced the complete mitochondrial genome of Panonychus citri (Family Tetranychidae), a worldwide citrus pest, and provide a comparison to other Acari. Results: The mitochondrial genome of P. citri is a typical circular molecule of 13,077 bp, and contains the complete set of 37 genes that are usually found in metazoans. This is the smallest mitochondrial genome within all sequenced Acari and other Chelicerata, primarily due to the significant size reduction of protein coding genes (PCGs), a large rRNA gene, and the A + T-rich region. The mitochondrial gene order for P. citri is the same as those for P. ulmi and Tetranychus urticae, but distinctly different from other Acari by a series of gene translocations and/ or inversions. -
A Catalog of Acari of the Hawaiian Islands
The Library of Congress has catalogued this serial publication as follows: Research extension series / Hawaii Institute of Tropical Agri culture and Human Resources.-OOl--[Honolulu, Hawaii]: The Institute, [1980- v. : ill. ; 22 cm. Irregular. Title from cover. Separately catalogued and classified in LC before and including no. 044. ISSN 0271-9916 = Research extension series - Hawaii Institute of Tropical Agriculture and Human Resources. 1. Agriculture-Hawaii-Collected works. 2. Agricul ture-Research-Hawaii-Collected works. I. Hawaii Institute of Tropical Agriculture and Human Resources. II. Title: Research extension series - Hawaii Institute of Tropical Agriculture and Human Resources S52.5.R47 630'.5-dcI9 85-645281 AACR 2 MARC-S Library of Congress [8506] ACKNOWLEDGMENTS Any work of this type is not the product of a single author, but rather the compilation of the efforts of many individuals over an extended period of time. Particular assistance has been given by a number of individuals in the form of identifications of specimens, loans of type or determined material, or advice. I wish to thank Drs. W. T. Atyeo, E. W. Baker, A. Fain, U. Gerson, G. W. Krantz, D. C. Lee, E. E. Lindquist, B. M. O'Con nor, H. L. Sengbusch, J. M. Tenorio, and N. Wilson for their assistance in various forms during the com pletion of this work. THE AUTHOR M. Lee Goff is an assistant entomologist, Department of Entomology, College of Tropical Agriculture and Human Resources, University of Hawaii. Cover illustration is reprinted from Ectoparasites of Hawaiian Rodents (Siphonaptera, Anoplura and Acari) by 1. M. Tenorio and M. L. -
Brc4env, a Network of Biological Resource Centres for Research in Environmental and Agricultural Sciences
Environmental Science and Pollution Research https://doi.org/10.1007/s11356-018-1973-7 ECOTOX, NEW QUESTIONS FOR TERRESTRIAL AND AQUATIC ECOTOXICOLOGY BRC4Env, a network of Biological Resource Centres for research in environmental and agricultural sciences Christian Mougin1 & Emmanuelle Artige2 & Frédéric Marchand3 & Samuel Mondy4 & Céline Ratié5 & Nadine Sellier6 & Philippe Castagnone-Sereno6 & Armelle Cœur D’Acier2 & Daniel Esmenjaud6 & Céline Faivre-Primot4 & Laurent Granjon 2 & Valérie Hamelet7 & Frederic Lange8 & Sylvie Pagès9 & Frédéric Rimet7 & Nicolas Ris 6 & Guillaume Sallé10 Received: 13 March 2018 /Accepted: 5 April 2018 # The Author(s) 2018 Abstract The Biological Resource Centre for the Environment BRC4Env is a network of Biological Resource Centres (BRCs) and collections whose leading objectives are to improve the visibility of genetic and biological resources maintained by its BRCs and collections and to facilitate their use by a large research community, from agriculture research to life sciences and environmental sciences. Its added value relies on sharing skills, harmonizing practices, triggering projects in com- parative biology, and ultimately proposing a single-entry portal to facilitate access to documented samples, taking into account the partnership policies of research institutions as well as the legal frame which varies with the biological nature of resources. BRC4Env currently includes three BRCs: the Centre for Soil Genetic Resources of the platform GenoSol, in partnership with the European Conservatory of Soil -
Complete Mitochondrial Genomes of the Human Follicle Mites Demodex Brevis and D
Palopoli et al. BMC Genomics 2014, 15:1124 http://www.biomedcentral.com/1471-2164/15/1124 RESEARCH ARTICLE Open Access Complete mitochondrial genomes of the human follicle mites Demodex brevis and D. folliculorum: novel gene arrangement, truncated tRNA genes, and ancient divergence between species Michael F Palopoli*, Samuel Minot, Dorothy Pei, Alicia Satterly and Julie Endrizzi Abstract Background: Follicle mites of the genus Demodex are found on a wide diversity of mammals, including humans; surprisingly little is known, however, about the evolution of this association. Additional sequence information promises to facilitate studies of Demodex variation within and between host species. Here we report the complete mitochondrial genome sequences of two species of Demodex known to live on humans—Demodex brevis and D. folliculorum—which are the first such genomes available for any member of the genus. We analyzed these sequences to gain insight into the evolution of mitochondrial genomes within the Acariformes. We also used relaxed molecular clock analyses, based on alignments of mitochondrial proteins, to estimate the time of divergence between these two species. Results: Both Demodex genomes shared a novel gene order that differs substantially from the ancestral chelicerate pattern, with transfer RNA (tRNA) genes apparently having moved much more often than other genes. Mitochondrial tRNA genes of both species were unusually short, with most of them unable to encode tRNAs that could fold into the canonical cloverleaf structure; indeed, several examples lacked both D- and T-arms. Finally, the high level of sequence divergence observed between these species suggests that these two lineages last shared a common ancestor no more recently than about 87 mya. -
WO 2014/186805 Al 20 November 2014 (20.11.2014) P O P C T
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2014/186805 Al 20 November 2014 (20.11.2014) P O P C T (51) International Patent Classification: (81) Designated States (unless otherwise indicated, for every A01N 59/00 (2006.01) A01P 7/04 (2006.01) kind of national protection available): AE, AG, AL, AM, A01P 7/00 (2006.01) A01P 17/00 (2006.01) AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, A01P 7/02 (2006.01) BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DK, DM, DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, (21) International Application Number: HN, HR, HU, ID, IL, IN, IR, IS, JP, KE, KG, KN, KP, KR, PCT/US20 14/038652 KZ, LA, LC, LK, LR, LS, LT, LU, LY, MA, MD, ME, (22) International Filing Date: MG, MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, 19 May 2014 (19.05.2014) OM, PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, SC, SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, (25) Filing Language: English TN, TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, (26) Publication Language: English ZW. (30) Priority Data: (84) Designated States (unless otherwise indicated, for every 61/824,689 17 May 2013 (17.05.2013) US kind of regional protection available): ARIPO (BW, GH, GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, SZ, TZ, (71) Applicant: LEE ANTIMICROBIAL SOLUTIONS, UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, TJ, LLC [US/US]; 430 Bedford Road, Suite 203, Armonk, TM), European (AL, AT, BE, BG, CH, CY, CZ, DE, DK, New York 10504 (US). -
Panonychus Ulmi (Koch, 1836)
Panonychus ulmi (Koch, 1836) Material examined non-types (from Hungary) Fig. 1. Panonychus ulmi adult female (non-type; Hungary) - detail of claws II, III, IV. Taxonomy Subfamily Tetranychinae Tribe Tetranychini Common Name European red mite Fig. 2. Panonychus ulmi adult female (non-type; Hungary) - detail of empodium, indicating the long tenent hairs on the Distribution lateral true claws. +Australia, Afghanistan, Algeria, Argentina, Austria, Belgium, Bermuda, Brazil, Bulgaria, CIS, Canada, Chile, China, Costa Rica, Czechoslovakia, Denmark, Egypt, Finland, France, *Germany, Greece, Hungary, India, Iran, Ireland, Israel, Italy, Japan, Korea, Lebanon, Libya, Lithuania, Madeira Island, Morocco, New Zealand, Morocco, New Zealand, Norway, Poland, Portugal, Rumania, South Africa, Spain, Sweden, Switzerland, Syria, Taiwan, The Netherlands, Tunisia, Turkey, UK, USA, Uruguay, Venezuela, Vietnam, Yugoslavia Fig. 3. Panonychus ulmi adult female (non-type) - detail of Taxonomy Changes empodium (redrawn from Geijskes (1939)). Tetranychus ulmi Koch 1836 Oligonychus ulmi (Koch) Hirst 1920 Metatetranychus ulmi (Koch) Oudemans 1931 Paratetranychus ulmi (Koch) Andre 1937 Panonychus ulmi (Koch) Ehara 1956 Tetranychus pilosus Canestrini & Fanzago 1876 Paratetranychus pilosus (Canestrini & Fanzago) Zacher 1913 Metatetranychus pilosus (Canestrini & Fanzago) Oudemans 1931, synonymy Fig. 4. Panonychus ulmi adult female (non-type; Hungary) - Pritchard & Baker 1955 dorsal habitus. Paratetranychus pilosus alboguttatus Zacher 1913, synonymy Pritchard & Baker 1955 -
1706865114.Full.Pdf
Disruption of a horizontally transferred phytoene PNAS PLUS desaturase abolishes carotenoid accumulation and diapause in Tetranychus urticae Astrid Bryona, Andre H. Kurlovsb, Wannes Dermauwa, Robert Greenhalghb, Maria Rigac,d, Miodrag Grbice,f, Luc Tirrya, Masahiro Osakabeg, John Vontasc,h, Richard M. Clarkb,i,1, and Thomas Van Leeuwena,j,1 aLaboratory of Agrozoology, Department of Crop Protection, Faculty of Bioscience Engineering, Ghent University, B-9000 Ghent, Belgium; bDepartment of Biology, University of Utah, Salt Lake City, UT 84112; cLaboratory of Molecular Entomology, Department of Biology, University of Crete, Vassilika Vouton, GR-70013, Heraklion, Crete, Greece; dInstitute of Molecular Biology & Biotechnology, Foundation for Research & Technology Hellas, GR-70013, Heraklion, Crete, Greece; eDepartment of Biology, The University of Western Ontario, London, ON N6A 5B7, Canada; fInstituto de Ciencias de la Vid y del Vino, Consejo Superior de Investigaciones Cientificas, Universidad de la Rioja, 26006 Logrono, Spain; gLaboratory of Ecological Information, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan; hLaboratory of Pesticide Science, Department of Crop Science, Agricultural University of Athens, GR-11855 Athens, Greece; iCenter for Cell and Genome Science, University of Utah, Salt Lake City, UT 84112; and jInstitute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, 1098 XH, Amsterdam, The Netherlands Edited by David L. Denlinger, Ohio State University, Columbus, OH, and approved June 13, 2017 (received for review April 26, 2017) Carotenoids underlie many of the vibrant yellow, orange, and red vision (2, 12, 13). Finally, carotenoids, such as lutein and zeaxanthin colors in animals, and are involved in processes ranging from in human and keto-carotenoids like astaxanthin in other organisms, vision to protection from stresses. -
Toxic, Repellent and Antifeedant
UNIVERSITÀ DEGLI STUDI DEL MOLISE Department of Agricultural, Environmental and Food Sciences PhD Course in: AGRICULTURE TECHNOLOGY AND BIOTECHNOLOGY (CURRICULUM: Sustainable plant production and protection) (CYCLE XXIX) PhD thesis TOXIC, REPELLENT AND ANTIFEEDANT ACTIVITIES OF LAVANDULA ANGUSTIFOLIA MILLER (LAMIACEAE) ESSENTIAL OIL AGAINST SITOPHILUS GRANARIUS (L.) (COLEOPTERA, CURCULIONIDAE) ADULTS S.S.D. AGR/11 Coordinator of the PhD Course: Prof. Giuseppe Maiorano Supervisor: Prof. Giuseppe Rotundo Co-Supervisor: Prof. Antonio De Cristofaro PhD Student: Maria Giovanna Di Stefano Matr: 151609 Academic Year 2015/2016 INDEX RIASSUNTO pag. 4 1. INTRODUCTION pag. 6 1.1. ESSENTIAL OIL (EO) pag. 7 1.2 PLANT pag. 8 1.2.1 THE LAMIACEAE FAMILY pag. 8 1.2.2 LAVANDULA GENUS pag. 8 1.2.3 LAVANDULA ANGUSTIFOLIA MILLER pag. 11 1.3 INSECT pag. 12 1.3.1 COLEOPTERA pag. 12 1.3.2 GROWTH AND DEVELOPMENT OF BEETLES pag. 13 1.3.3 FAMILY CURCULIONIDAE, THE SNOUT BEETLES pag. 16 1.3.4 THE GRANARY WEEVIL, SITOPHILUS GRANARIUS (L.) pag. 16 1.3.5 PREVENTION AND CONTROL OF S.GRANARIUS pag.20 1.4. INERT DUSTS pag. 22 1.4.1 GROUPS pag. 22 1.4.2 APPLICATION IN AGRICULTURE pag 24 2. AIM OF THE WORK pag 29 3. MATERIALS AND METHODS pag. 30 3.1. PLANT MATERIAL pag. 30 3.2. EXTRACTION pag. 31 3.3 CHEMICAL ANALYSIS pag. 31 3.4. INSECT pag. 32 3.5. BIOASSAY TO EVALUATE ACTIVITY OF EO pag. 32 3.5.1 CONTACT TOXICITY pag. 32 3.5.2 FUMIGANT TOXICITY pag. 33 3.5.3 REPELLENCY ON FILTER PAPER DISC pag. -
Differential Analysis of the Cytochrome P450 Acaricide-Resistance Genes In
Differential analysis of the cytochrome p450 acaricide-resistance genes in Panonychus citri (Trombidiformes: Tetranychidae) strains Gaofei Jiang1,3, Yunfei Zhang2,3, Fei Chen1,3, Junli Li2,3, Xiaojiao Li2,3, Jiansu Yue2,3, Haoqiang Liu3, Hongjun Li3 and Chun Ran1,2,3* Abstract The citrus red mite, Panonychus citri (McGregor) (Trombidiformes: Tetranychidae), a highly destructive pest in citrus groves around the world, has developed resistance to many registered acaricides. Hexythiazox is a selective miticide that has been widely used to control citrus mites in a variety of crops. Forty-six cytochrome P450 mono-oxygenase genes related to general pesticide resistance in other insect species were obtained from the tran- scriptomes of the hexythiazox-resistant (RR) and hexythiazox-susceptible (SS) strains ofP. citri and divided into 4 clans, 15 families and 24 subfamilies. Sequence analyses of each CYP resulted in detection of 3 mutationsin theCYP307A1 gene (841-A to C, 1395-T to C, 1491-T to C) that differed between the 2 strains. Only the change at an amino acid position (278-lysine to glutamine) resulted in a sense mutation. One SNP site was also detected in CYP381A2 (40-A to T) causing a sense amino acid mutation (14-threonine to serine). Seven of these P450s belonged to the CYP2 clan, CYP3 clan and CYP4 clan based on digital gene expression (DGE) library sequencing with a |log2 ratio| value greater than 2, but there were no significant differences revealed by qRT-PCR analysis. This study provides essential information for future research on the hexythiazox-resistance mechanism ofP. citri. More methods are needed to further elucidate the molecular mechanisms of resistance to hexythiazox in P. -
Influence of Vineyard Inter-Row Groundcover Vegetation
insects Article Influence of Vineyard Inter-Row Groundcover Vegetation Management on Arthropod Assemblages in the Vineyards of North-Eastern Italy Giulia Zanettin 1 , Angela Bullo 1, Alberto Pozzebon 1 , Giovanni Burgio 2 and Carlo Duso 1,* 1 Department of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padova, Viale dell’Università 16, Agripolis, Legnaro, 35020 Padova, Italy; [email protected] (G.Z.); [email protected] (A.B.); [email protected] (A.P.) 2 Department of Agricultural and Food Sciences (DISTAL), Alma Mater Studiorum-Università di Bologna, Viale G. Fanin, 42, 40127 Bologna, Italy; [email protected] * Correspondence: [email protected] Simple Summary: Habitat simplification and use of pesticides in vineyard agro-ecosystems sim- plified arthropod communities, reducing natural pest control. In this context, habitat management practices could be useful strategies to provide fundamental sources for sustaining natural enemies. The effects of habitat management practices on pests and beneficial arthropods were evaluated in vineyards of North-eastern Italy through different field experiments. We reduced mowing frequency of inter-row spontaneous grasses, compared different timing of mowing of a green manure mixture, and different green manure mixtures. The abundance of key natural enemies (e.g., predatory mites, parasitic wasps and spiders) and some grapevine leafhoppers increased when the grass mowing Citation: Zanettin, G.; Bullo, A.; frequency was reduced. Many beneficial arthropods increased in numbers in organic vineyards. Late Pozzebon, A.; Burgio, G.; Duso, C. mowing of green manure favored spiders and parasitic wasps but not herbivores associated with Influence of Vineyard Inter-Row grapevines. The experiments on the comparison of green manure mixtures did not significantly affect Groundcover Vegetation the arthropod communities.