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Short Title: Lentinus, Polyporellus, Neofavolus
In Press at Mycologia, preliminary version published on February 6, 2015 as doi:10.3852/14-084 Short title: Lentinus, Polyporellus, Neofavolus Phylogenetic relationships and morphological evolution in Lentinus, Polyporellus and Neofavolus, emphasizing southeastern Asian taxa Jaya Seelan Sathiya Seelan Biology Department, Clark University, 950 Main Street, Worcester, Massachusetts 01610, and Institute for Tropical Biology and Conservation (ITBC), Universiti Malaysia Sabah, 88400 Kota Kinabalu, Sabah, Malaysia Alfredo Justo Laszlo G. Nagy Biology Department, Clark University, 950 Main Street, Worcester, Massachusetts 01610 Edward A. Grand Mahidol University International College (Science Division), 999 Phuttamonthon, Sai 4, Salaya, Nakorn Pathom 73170, Thailand Scott A. Redhead ECORC, Science & Technology Branch, Agriculture & Agri-Food Canada, CEF, Neatby Building, Ottawa, Ontario, K1A 0C6 Canada David Hibbett1 Biology Department, Clark University, 950 Main Street Worcester, Massachusetts 01610 Abstract: The genus Lentinus (Polyporaceae, Basidiomycota) is widely documented from tropical and temperate forests and is taxonomically controversial. Here we studied the relationships between Lentinus subg. Lentinus sensu Pegler (i.e. sections Lentinus, Tigrini, Dicholamellatae, Rigidi, Lentodiellum and Pleuroti and polypores that share similar morphological characters). We generated sequences of internal transcribed spacers (ITS) and Copyright 2015 by The Mycological Society of America. partial 28S regions of nuc rDNA and genes encoding the largest subunit of RNA polymerase II (RPB1), focusing on Lentinus subg. Lentinus sensu Pegler and the Neofavolus group, combined these data with sequences from GenBank (including RPB2 gene sequences) and performed phylogenetic analyses with maximum likelihood and Bayesian methods. We also evaluated the transition in hymenophore morphology between Lentinus, Neofavolus and related polypores with ancestral state reconstruction. -
Chapter 1. Introduction
Chapter 1: Introduction Chapter 1. Introduction Research and ecological context Importance of the mutualistic symbiosis Truffle-like fungi are an important component in many terrestrial ecosystems. They provide a food resource for mycophagous (‘fungus-eating’) animals and are an essential symbiont for many plant species (Claridge 2002; Brundrett 2009). Most truffle-like fungi are considered ectomycorrhizal (EcM) in which the fungus hyphae penetrate the plant root structure and form a sheath (‘Hartig Net’) around plant root tips. This enables the exchange of water, minerals, and metabolites between fungus and plant (Nehls et al. 2010). The fungus can form extensive networks of mycelium in the soil extending the effective surface of the plant-host root system. EcM fungi can also confer resistance to parasites, predators, pathogens, and heavy-metal pollution, as well as the breakdown of inorganic substrates (Claridge 2002; Gadd 2007; Bonfante & Genre 2010). EcM fungi can reproduce through mycelia (vegetative) growth or through spores. Truffle-like EcM fungi form reproductive below-ground (hypogeous) fruit-bodies (sporocarps) in which spores are entirely or partly enclosed within fungal tissue of the sporocarp (‘sequestrate’), and often referred to as ‘truffles’. The sporocarps of these fungi (‘truffles’) generally require excavation and consumption by mycophagous mammals for spores to be liberated and dispersed to new locations (Johnson 1996; Bougher & Lebel 2001). In contrast, epigeous or ‘mushroom-like’ fungi produce stipitate above-ground sporocarps in which spores are not enclosed within fungal tissue and are actively or passively discharged into the surrounding environment. Consequently, truffle-like taxa are considered to have evolved to be reliant on mycophagous animals for their dispersal. -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
A Samoan Hebeloma with Phylogenetic Ties to the Western Pacific
In Press at Mycologia, preliminary version published on October 31, 2014 as doi:10.3852/14-047 Short title: Samoan Hebeloma A Samoan Hebeloma with phylogenetic ties to the western Pacific Bradley R. Kropp1 Biology Department 5305 Old Main Hall, Utah State University, Logan, Utah 84341 Abstract: Hebeloma ifeleletorum is described as a new species from American Samoa. Based on analyses of ITS and combined nLSU-ITS datasets H. ifeleletorum clusters with but is distinct from described species that have been placed in the genus Anamika by some. The phylogenetic relationship of H. ifeleletorum to the genus Anamika from Asia and to other species from Australia and New Caledonia suggests that H. ifeleletorum has origins in the western Pacific. Key words: Agaricales, Anamika, biogeography, Oceania, South Pacific INTRODUCTION The islands of the South Pacific have received scant attention from mycologists. At first glance, these islands seems too small to harbor much fungal diversity. Whereas that might be true for many of the tiny atolls scattered across the Pacific, some of the larger volcanic islands like those of the Samoan Archipelago hold unique and diverse plant communities. As a consequence they potentially also hold diverse fungal communities (Whistler 1992, 1994; Hawksworth 2001; Schmit and Mueller 2007). Thus far some familiar and widespread agarics such as Chlorophyllum molybdites are known from American Samoa along with one recently described species of Inocybe and another new species of Moniliophthora (Kropp and Albee-Scott 2010, 2012). Other than that, the Samoan mycobiota is poorly known and more undescribed species probably will be be uncovered as work on the material collected in these islands continues. -
August 2006 Newsletter of the Mycological Society of America
Supplement to Mycologia Vol. 57(4) August 2006 Newsletter of the Mycological Society of America — In This Issue — Systematic Botany & Mycology Laboratory: Home of the U.S. National Fungus Collections Systematic Botany & Mycology Laboratory: Home By Amy Rossman of the U.S. National Fungus At present the USDA Agricultural Research Service’ Systematic Collections . 1 Botany and Mycology Laboratory (SBML) in Beltsville, Maryland, serves Myxomycetes (True Slime as the research base for five systematic mycologists plus two plant-quar- Molds): Educational Sources antine mycologists. The SBML is also the organization that maintains the for Students and Teachers U.S. National Fungus Collections with databases about plant-associated Part II . 4 fungi. The direction of the research and extent of the fungal databases has changed over the past two decades in order to meet the needs of U.S. agri- MSA Business . 6 culture. This invited feature article will present an overview of the U.S. MSA Abstracts . 11 National Fungus Collections, the world’s largest fungus collection, and associated databases and interactive keys available at the Web site and re- Mycological News . 41 view the research conducted by mycologists currently at SBML. Mycologist’s Bookshelf . 44 Essential to the needs of scientists at SBML and available to scientists worldwide are the mycological resources maintained at SBML. Primary Mycological Classifieds . 49 among these are the one-million specimens in the U.S. National Fungus Calender of Events . 50 Collections. Collections Manager Erin McCray ensures that these speci- mens are well-maintained and can be obtained on loan for research proj- Mycology On-Line . -
Two New Species of Geastrum (Geastraceae, Basidiomycota) Found in Brazil
Nova Hedwigia 2013 Vol. 96 issue 3–4, 445–456 Article published online March 6, 2013 Two new species of Geastrum (Geastraceae, Basidiomycota) found in Brazil Bianca Denise Barbosa da Silva*1, Tiara Sousa Cabral2, Paulo Marinho3, Noemia Kazue Ishikawa4 and Iuri Goulart Baseia5 1 Programa de Pós-Graduação em Biologia de Fungos, Depto. Micologia, Universidade Federal de Pernambuco, Recife 50670-420 Brazil 2 Programa de Pós-graduação em Genética, Conservação e Biologia Evolutiva, Instituto Nacional de Pesquisas da Amazônia, Manaus 69011-970 Brazil 3 Depto. Biologia Celular e Genética, Universidade Federal do Rio Grande do Norte, Natal 59072-970 Brazil 4 Instituto Nacional de Pesquisa da Amazônia, Coordenação de Biodiversidade, Manaus 69060-001 Brazil 5 Depto. Botânica, Ecologia e Zoologia, Universidade Federal do Rio Grande do Norte, Natal 59072-970 Brazil With 4 figures Abstract: We have studied molecular and morphological data of Geastrum aculeatum sp. nov. and G. echinulatum sp. nov. These two species were found in Brazil’s semi-arid region and in central Amazon. It is characterized by the nature of the mycelial layer with aculeate tufts. Geastrum echinu- latum differs from G. aculeatum in the size of the spores, presence of subiculum and structural details in the mycelial tufts. The phylogenetic analyses were performed through parsimony and Bayesian methods, using the atp6 and LSU regions. These analyses confirm that both species are distinctly segregated from the other Geastrum species analyzed here. Key words: Geastraceae, molecular phylogenetics, taxonomy, Neotropics. *corresponding author: [email protected] © 2013 J. Cramer in Gebr. Borntraeger Verlagsbuchhandlung, Stuttgart, www.borntraeger-cramer.de Germany. -
Ectomycorrhizal Fungi from Southern Brazil – a Literature-Based Review, Their Origin and Potential Hosts
Mycosphere Doi 10.5943/mycosphere/4/1/5 Ectomycorrhizal fungi from southern Brazil – a literature-based review, their origin and potential hosts Sulzbacher MA1*, Grebenc, T2, Jacques RJS3 and Antoniolli ZI3 1Universidade Federal de Pernambuco, Departamento de Micologia/CCB, Av. Prof. Nelson Chaves, s/n, CEP: 50670- 901, Recife, PE, Brazil 2Slovenian Forestry Institute Vecna pot 2, SI-1000 Ljubljana, Slovenia 3Universidade Federal de Santa Maria, Departamento de Solos, CCR Campus Universitário, 971050-900, Santa Maria, RS, Brazil Sulzbacher MA, Grebenc T, Jacques RJS, Antoniolli ZI 2013 – Ectomycorrhizal fungi from southern Brazil – a literature-based review, their origin and potential hosts. Mycosphere 4(1), 61– 95, Doi 10.5943 /mycosphere/4/1/5 A first list of ectomycorrhizal and putative ectomycorrhizal fungi from southern Brazil (the states of Rio Grande do Sul, Santa Catarina and Paraná), their potential hosts and origin is presented. The list is based on literature and authors observations. Ectomycorrhizal status and putative origin of listed species was assessed based on worldwide published data and, for some genera, deduced from taxonomic position of otherwise locally distributed species. A total of 144 species (including 18 doubtfull species) in 49 genera were recorded for this region, all accompanied with a brief distribution, habitat and substrate data. At least 30 collections were published only to the genus level and require further taxonomic review. Key words – distribution – habitat – mycorrhiza – neotropics – regional list Article Information Received 28 November 2012 Accepted 20 December 2012 Published online 10 February 2013 *Corresponding author: MA Sulzbacher – e-mail – [email protected] Introduction work of Singer & Araújo (1979), Singer et al. -
<I>Hebeloma Vinosophyllum</I>
ISSN (print) 0093-4666 © 2014. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/128.25 Volume 128, pp. 25–36 April–June 2014 The first record of Hebeloma vinosophyllum (Strophariaceae) in Southeast Asia Bao-Thuy Quyen Ho1, 2*, Nguyen-Duc Hoang Pham3, Kiminori Shimizu4, Toshimitsu Fukiharu5, Binh Nguyen Truong6, & Akira Suzuki1, 7 1 Graduate School of Horticulture, Chiba University, 648 Matsudo, Matsudo 271-8510, Japan 2 Faculty of Biology, University of Science, Vietnam National University in Hochiminh City, 227 NguyenVanCu St., Dist. 5, Hochiminh City, Vietnam 3 Division of Microbiology, Biotechnology Center of Hochiminh City, km 1900, Highway 1A, Dist. 12, Hochiminh City, Vietnam 4 Medical Mycology Research Center, Chiba University, 1-8-1 Inohana, Chuo-ku, Chiba 260-8673, Japan 5 Natural History Museum and Institute, Chiba, 955-2 Aoba-cho, Chuo-ku, Chiba 260-8682, Japan 6 Faculty of Biology, Dalat University, 1 Phu Dong Thien Vuong St., Dalat City, LamDong Province, Vietnam 7 Faculty of Knowledge Engineering, Tokyo City University, 1-28-1 Tamazutsumi, Setagaya-ku, Tokyo 158-8557, Japan * Correspondence to: [email protected] Abstract – Basidiomata of a Hebeloma sp. were collected from two urea-plots in a pine (Pinus kesiya) forest, Da Lat City, Lam Dong Province, Vietnam. Based on morphology, molecular phylogeny, and mating compatibility, the specimens were identified asHebeloma vinosophyllum. This is the first record ofH. vinosophyllum in Southeast Asia and of H. vinosophyllum occurring in P. kesiy a forests, one of two dominant pines in Southeast Asia. Key words – Porphyrospora, cortina, cheilocystidia, ammonia fungi Introduction Hebeloma vinosophyllum was originally described by Hongo (1965) from Japanese specimens. -
Fungal Endophyte Communities of Three Agricultural Important Grass Species Differ in Their Response Towards Management Regimes
Article Fungal Endophyte Communities of Three Agricultural Important Grass Species Differ in Their Response Towards Management Regimes Bernd Wemheuer 1,2, Torsten Thomas 2 and Franziska Wemheuer 1,3,†,* 1 Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, D-37077 Göttingen, Germany; [email protected] 2 Centre for Marine Bio-Innovation and School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, NSW 2052, Australia; [email protected] 3 Division of Agricultural Entomology, Department of Crop Sciences, Georg-August University of Göttingen, D-37077 Göttingen, Germany * Correspondence: [email protected] † Present address: Evolution and Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, NSW 2052, Australia. Received: 31 December 2018; Accepted: 23 January 2019; Published: 27 January 2019 Abstract: Despite the importance of endophytic fungi for plant health, it remains unclear how these fungi are influenced by grassland management practices. Here, we investigated the effect of fertilizer application and mowing frequency on fungal endophyte communities and their life strategies in aerial tissues of three agriculturally important grass species (Dactylis glomerata L., Festuca rubra L. and Lolium perenne L.) over two consecutive years. Our results showed that the management practices influenced fungal communities in the plant holobiont, but observed effects differed between grass species and sampling year. Phylogenetic diversity of fungal endophytes in D. glomerata was significantly affected by mowing frequency in 2010, whereas fertilizer application and the interaction of fertilization with mowing frequency had a significant impact on community composition of L. -
Complete References List
Aanen, D. K. & T. W. Kuyper (1999). Intercompatibility tests in the Hebeloma crustuliniforme complex in northwestern Europe. Mycologia 91: 783-795. Aanen, D. K., T. W. Kuyper, T. Boekhout & R. F. Hoekstra (2000). Phylogenetic relationships in the genus Hebeloma based on ITS1 and 2 sequences, with special emphasis on the Hebeloma crustuliniforme complex. Mycologia 92: 269-281. Aanen, D. K. & T. W. Kuyper (2004). A comparison of the application of a biological and phenetic species concept in the Hebeloma crustuliniforme complex within a phylogenetic framework. Persoonia 18: 285-316. Abbott, S. O. & Currah, R. S. (1997). The Helvellaceae: Systematic revision and occurrence in northern and northwestern North America. Mycotaxon 62: 1-125. Abesha, E., G. Caetano-Anollés & K. Høiland (2003). Population genetics and spatial structure of the fairy ring fungus Marasmius oreades in a Norwegian sand dune ecosystem. Mycologia 95: 1021-1031. Abraham, S. P. & A. R. Loeblich III (1995). Gymnopilus palmicola a lignicolous Basidiomycete, growing on the adventitious roots of the palm sabal palmetto in Texas. Principes 39: 84-88. Abrar, S., S. Swapna & M. Krishnappa (2012). Development and morphology of Lysurus cruciatus--an addition to the Indian mycobiota. Mycotaxon 122: 217-282. Accioly, T., R. H. S. F. Cruz, N. M. Assis, N. K. Ishikawa, K. Hosaka, M. P. Martín & I. G. Baseia (2018). Amazonian bird's nest fungi (Basidiomycota): Current knowledge and novelties on Cyathus species. Mycoscience 59: 331-342. Acharya, K., P. Pradhan, N. Chakraborty, A. K. Dutta, S. Saha, S. Sarkar & S. Giri (2010). Two species of Lysurus Fr.: addition to the macrofungi of West Bengal. -
Ulukiġla (Nġğde) Yöresġnde Yetġġen Makromantarlarin Belġrlenmesġ
ULUKIġLA (NĠĞDE) YÖRESĠNDE YETĠġEN MAKROMANTARLARIN BELĠRLENMESĠ Osman BERBER Yüksek Lisans Tezi Biyoloji Anabilim Dalı Prof. Dr. Abdullah KAYA Haziran-2019 T.C KARAMANOĞLU MEHMETBEY ÜNĠVERSĠTESĠ FEN BĠLĠMLERĠ ENSTĠTÜSÜ ULUKIġLA (NĠĞDE) YÖRESĠNDE YETĠġEN MAKROMANTARLARIN BELĠRLENMESĠ YÜKSEK LĠSANS TEZĠ Osman BERBER Anabilim Dalı: Biyoloji Tez DanıĢmanı: Prof. Dr. Abdullah KAYA KARAMAN-2019 TEZ BĠLDĠRĠMĠ Yazım kurallarına uygun olarak hazırlanan bu tezin yazılmasında bilimsel ahlak kurallarına uyulduğunu, başkalarının eserlerinden yararlanılması durumunda bilimsel normlara uygun olarak atıfta bulunulduğunu, tezin içerdiği yenilik ve sonuçların başka bir yerden alınmadığını, kullanılan verilerde herhangi bir tahrifat yapılmadığını, tezin herhangi bir kısmının bu üniversite veya başka bir üniversitedeki başka bir tez çalışması olarak sunulmadığını beyan ederim. OsmanBERBER ÖZET Yüksek Lisans Tezi ULUKIġLA (NĠĞDE) YÖRESĠNDE YETĠġEN MAKROMANTARLARIN BELĠRLENMESĠ Osman BERBER Karamanoğlu Mehmetbey Üniversitesi Fen Bilimleri Enstitüsü Biyoloji Anabilim Dalı DanıĢman: Prof. Dr. Abdullah KAYA Haziran, 2019, 121 sayfa Bu çalışma Ulukışla (Niğde) yöresinde yetişen makromantarlar üzerinde gerçekleştirilmiştir. 2017-2019 yılları arasında periyodik olarak bölgede gerçekleştirilen arazi çalışmaları sonucunda 356 makromantar örneği toplanmıştır. Laboratuvar ortamına getirilen örnekler kurutularak fungaryum materyali haline getirilmiş, gerekli teşhis işlemleri sonucunda 6 sınıf, 13 takım, 38 familya ve 62 cinse ait 79 tür tanımlanmıştır. Belirlenen türlerden -
Covered = = from Public Databases (Fig
Persoonia 42, 2019: 127–185 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2019.42.06 A phylogenetic and taxonomic revision of sequestrate Russulaceae in Mediterranean and temperate Europe J.M. Vidal1*, P. Alvarado2*, M. Loizides3, G. Konstantinidis4, P. Chachuła5, P. Mleczko6, G. Moreno7, A. Vizzini8, M. Krakhmalnyi9, A. Paz10, J. Cabero11, V. Kaounas12, M. Slavova13, B. Moreno-Arroyo14, J. Llistosella15 Key words Abstract A comprehensive morphological and genetic study of type material and new collections of sequestrate Russulales species formerly belonging to the genera Arcangeliella, Elasmomyces, Gymnomyces, Hydnangium, angiocarpic Hymenogaster, Macowanites, Martellia, Secotium and Zelleromyces is here undertaken, for the purpose of providing Arcangeliella a complete taxonomical revision of sequestrate Russulaceae species in the Mediterranean and temperate regions Elasmomyces of Europe. As a result, seven distinct taxa in the genus Lactarius and 18 in the genus Russula are identified. Six Europe of them are new species: L. populicola, L. subgiennensis, R. bavarica, R. candidissima, R. hobartiae and R. medi Gymnomyces terraneensis, and seven represent new combinations: L. josserandii (≡ Zelleromyces josserandii), L. soehneri Lactarius (≡ Hydnangium soehneri), R. candida (≡ Hydnangium candidum), R. cerea (≡ Hydnangium cereum), R. messapica Macowanites var. messapicoides (≡ Macowanites messapicoides), R. meridionalis (≡ Zelleromyces meridionalis) and R. neuhoffii Martellia (≡ Hydnangium neuhoffii). Twenty-two of the 25 taxa are illustrated, while descriptions, microscopy images, as well pseudoangiocarpic as extensive information on the ecology, chorology and phylogeny for all taxa are provided. A key is further included taxonomy to facilitate their identification. Zelleromyces Article info Received: 2 July 2018; Accepted: 4 December 2018; Published: 5 April 2019.