Polio Laboratory Manual
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WHO/IVB/04.10 ORIGINAL: ENGLISH Polio laboratory manual 4th edition, 2004 The World Health Organization has managed The evaluation of the impact of vaccine- cooperation with its Member States and preventable diseases informs decisions to provided technical support in the fi eld of introduce new vaccines. Optimal strategies vaccine-preventable diseases since 1975. and activities for reducing morbidity and In 2003, the offi ce carrying out this function mortality through the use of vaccines are was renamed the WHO Department of implemented (Vaccine Assessment and Immunization, Vaccines and Biologicals. Monitoring). The Department’s goal is the achievement Efforts are directed towards reducing fi nancial of a world in which all people at risk are and technical barriers to the introduction protected against vaccine-preventable of new and established vaccines and diseases. Work towards this goal can be immunization-related technologies (Access to visualized as occurring along a continuum. Technologies). The range of activities spans from research, development and evaluation of vaccines Under the guidance of its Member States, to implementation and evaluation of WHO, in conjunction with outside world immunization programmes in countries. experts, develops and promotes policies and strategies to maximize the use and delivery WHO facilitates and coordinates research of vaccines of public health importance. and development on new vaccines and Countries are supported so that they immunization-related technologies for viral, acquire the technical and managerial skills, bacterial and parasitic diseases. Existing competence and infrastructure needed to life-saving vaccines are further improved and achieve disease control and/or elimination new vaccines targeted at public health crises, and eradication objectives (Expanded such as HIV/AIDS and SARS, are discovered Programme on Immunization). and tested (Initiative for Vaccine Research). The quality and safety of vaccines and other biological medicines is ensured through the development and establishment of global norms and standards (Quality Assurance and Safety of Biologicals). Department of Immunization, Vaccines and Biologicals I Family and Community Health World Health Organization Immunization, Vaccines and Biologicals CH-1211 Geneva 27 Switzerland Fax: +41 22 791 4227 Email: [email protected] or visit our web site at: http://www.who.int/vaccines-documents VB WHO/IVB/04.10 ORIGINAL: ENGLISH Polio laboratory manual I 4th edition, 2004 VImmunization,B VaccinesVaccines and Biologicals The Department of Immunization, Vaccines and Biologicals thanks the donors whose unspecified financial support has made the production of this document possible. Ordering code: WHO/IVB/04.10 Printed: November 2004 Copies may be requested from: World Health Organization Department of Immunization, Vaccines and Biologicals CH-1211 Geneva 27, Switzerland Fax: +41 22 791 4227; Email: [email protected] This document revises and replaces the Manual for the virological investigation of polio WHO/EPI/GEN/97.01. © World Health Organization 2004 All rights reserved. Publications of the World Health Organization can be obtained from Marketing and Dissemination, World Health Organization, 20 Avenue Appia, 1211 Geneva 27, Switzerland (tel: +41 22 791 2476; fax: +41 22 791 4857; email: [email protected]). Requests for permission to reproduce or translate WHO publications – whether for sale or for noncommercial distribution – should be addressed to Publications, at the above address (fax: +41 22 791 4806; email: [email protected]). The designations employed and the presentation of the material in this publication do not imply the expression of any opinion whatsoever on the part of the World Health Organization concerning the legal status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. Dotted lines on maps represent approximate border lines for which there may not yet be full agreement. The mention of specific companies or of certain manufacturers’ products does not imply that they are endorsed or recommended by the World Health Organization in preference to others of a similar nature that are not mentioned. Errors and omissions excepted, the names of proprietary products are distinguished by initial capital letters. The World Health Organization does not warrant that the information contained in this publication is complete and correct and shall not be liable for any damages incurred as a result of its use. Printed by the WHO Document Production Services, Geneva, Switzerland ii Polio laboratory manual Contents List of figures ..............................................................................................................v List of tables ............................................................................................................vii Abbreviations and acronyms ...........................................................................................ix 1. Introduction.............................................................................................................. 1 1.1 The Polio Eradication Initiative .................................................................. 1 1.2 History of poliomyelitis and polio vaccines............................................... 4 1.3 Characterization of the pathogen................................................................ 4 1.4 Transmission of poliovirus .......................................................................... 6 2. Role and function of the laboratory in polio eradication ................................ 10 2.1 Appropriate investigations......................................................................... 10 2.2 Structure and activities of the WHO polio laboratory network ............ 11 2.3 Coordination of the network .................................................................... 13 2.4 Accreditation of network laboratories...................................................... 15 3. Laboratory quality assurance .............................................................................. 22 3.1 The basis of laboratory quality assurance................................................. 22 3.2 Standard operating procedures (SOPs)..................................................... 24 3.3 Documentation ........................................................................................... 29 3.4 Equipment and instruments....................................................................... 29 3.5 Supplies........................................................................................................ 30 3.6 Laboratory safety........................................................................................ 34 3.7 Audits .......................................................................................................... 37 4. Cell culture techniques.............................................................................................. 39 4.1 Working in the cell culture laboratory ..................................................... 39 4.2 Cell culture procedures .............................................................................. 47 4.3 Composition of media and other reagents used in cell and virus culture ......................................................................................... 59 4.4 Cell culture problems: identification and elimination............................. 62 4.5 Hoechst 33258 direct DNA stain for Mycoplasma ................................. 65 4.6 MYCO-TEST immuno assay for Mycoplasma detection....................... 66 4.7 PCR assay for Mycoplasma detection ...................................................... 68 WHO/IVB/04.10 iii 5. Evaluating cell line sensitivity.............................................................................. 73 5.1 Selection of reference standard for quality control of cell lines.............. 73 5.2 Preparation of laboratory quality-control standards............................... 74 5.3 Titration of laboratory quality control standard ..................................... 75 5.4 Calculation of the virus titre by the Kärber formula .............................. 78 5.5 Interpreting data on cell-line sensitivity and troubleshooting................ 78 5.6 Procurement of reference poliovirus strains............................................. 79 6. Specimen receipt and processing.......................................................................... 81 6.1 Receipt of specimens .................................................................................. 81 6.2 Specimen preparation ................................................................................. 82 6.3 Composition of reagents used in specimen processing ........................... 85 7. Isolation and identification of polioviruses ........................................................ 87 7.1 Recommended cell lines for the isolation of polioviruses....................... 87 7.2 Isolation of polio and other enteroviruses................................................ 88 7.3 Identification of poliovirus isolates........................................................... 91 7.4 Identification of non-poliovirus enteroviruses ........................................ 98 8. Intratypic differentiation of polioviruses ......................................................... 101 8.1 ELISA method for intratypic differentiation........................................