Phytophthora Ramorum
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Research on the Epidemiology, Ecology and Management of Phytophthora Ramorum in California Forests1
Research on the Epidemiology, Ecology and Management of Phytophthora ramorum in California Forests1 David M. Rizzo2 Key words: disease management, landscape ecology, invasive species Introduction The ultimate goal of Phytophthora ramorum research is to develop disease management strategies. To date, studies have been focused at three management levels: the individual tree, the landscape (or forest stand), and the regional to international scale (Garbelotto and others 2003, Rizzo and Garbelotto 2003, Rizzo and others 2005). I will focus my brief remarks on the forest landscape, possibly the most difficult level to implement disease control strategies (for a more comprehensive discussion see Rizzo and others 2005). From a research perspective, there are four non-exclusive areas that we must continue to focus on in order to facilitate P. ramorum management in forest stands: Put the impacts of sudden oak death in context with expected successional patterns and ecosystem processes within coastal forests For any P. ramorum management proposal to be successful in coastal California forests it must also be put into context with other management goals (e.g. timber extraction, wildlife) and threats (e.g., high fuel loads due to fire suppression, other invasive species) (Rizzo and others 2005). This requires continued study on the ecology of the invaded forests in addition to examining the biology of P. ramorum. This pathogen has invaded three broad forest types in California: mixed-evergreen forests dominated by coast live oak (Quercus agrifolia), mixed-evergreen forests dominated by tanoak (Lithocarpus densiflorus) and Douglas-fir (Pseudotsuga menziesii), and coast redwood (Sequoia sempervirens) forests. With the possible exception of the coast redwood forest type, the ecology of many coastal mixed-evergreen forests has not been well characterized (Barbour and Minnich 2000). -
Invasive Alien Species Fact Sheet Phytophthora Ramorum
NOBANIS –Invasive Alien Species Fact Sheet Phytophthora ramorum Author of this species fact sheet: Anna Poimala and Arja Lilja, Finnish Forest Research Institute, Vantaa Research Unit, PO Box 18, 01301 Vantaa, Finland; +358 40 801 5377 ; [email protected] Bibliographical reference – how to cite this fact sheet: Poimala, A. & Lilja, A. (2013): NOBANIS – Invasive Alien Species Fact Sheet – Phytophthora ramorum . – From: Online Database of the European Network on Invasive Alien Species – NOBANIS www.nobanis.org , Date of access x/x/201x. Species description Scientific names: Phytophthora ramorum Werres, De Cock & Man in`t Veld, Oomycetes, Chromalveolata. Synonyms: None. Common names: Twig and leaf blight (EU), Ramorum leaf blight (North America), Sudden Oak Death= SOD (North America), tamme-äkksurm (EE), maladie de l’encre des chênes rouges (FR), mort subite du chêne (FR), tammen äkkikuolema (FI), europæisk visneskimmel (DK, European isolates) / californisk visneskimmel (DK, North American isolates), Plötslig ekdöd (SE), Plötzliches eichensterben (DE), Nagła śmier ć d ębu (POL). Fig 1 . Sporangia of Phytophthora ramorum in soil extract water, photo by Arja Lilja. 1 Fig 2 . Branched dendroid-like hyphae of Phytophthora ramorum on the bottom of an agar plate, photo by Arja Lilja. Fig 3. Clamydospore of Phytophthora ramorum , photo by Arja Lilja. Species identification Phytophthora ramorum is a heterothallic species characterized by abundant production of chlamydospores and elongate, ellipsoid, deciduous sporangia. The mean sporangium length was 43.6 µm ± 5.3 with a range from 20-79 µm, and the mean sporangium width 23.9 µm ± 2.6 with a range from 12-40 µm in measurements done by Werres and Kaminski (2005). -
Outline of Angiosperm Phylogeny
Outline of angiosperm phylogeny: orders, families, and representative genera with emphasis on Oregon native plants Priscilla Spears December 2013 The following listing gives an introduction to the phylogenetic classification of the flowering plants that has emerged in recent decades, and which is based on nucleic acid sequences as well as morphological and developmental data. This listing emphasizes temperate families of the Northern Hemisphere and is meant as an overview with examples of Oregon native plants. It includes many exotic genera that are grown in Oregon as ornamentals plus other plants of interest worldwide. The genera that are Oregon natives are printed in a blue font. Genera that are exotics are shown in black, however genera in blue may also contain non-native species. Names separated by a slash are alternatives or else the nomenclature is in flux. When several genera have the same common name, the names are separated by commas. The order of the family names is from the linear listing of families in the APG III report. For further information, see the references on the last page. Basal Angiosperms (ANITA grade) Amborellales Amborellaceae, sole family, the earliest branch of flowering plants, a shrub native to New Caledonia – Amborella Nymphaeales Hydatellaceae – aquatics from Australasia, previously classified as a grass Cabombaceae (water shield – Brasenia, fanwort – Cabomba) Nymphaeaceae (water lilies – Nymphaea; pond lilies – Nuphar) Austrobaileyales Schisandraceae (wild sarsaparilla, star vine – Schisandra; Japanese -
Susceptibility of Larch, Hemlock, Sitka Spruce, and Douglas-Fir to Phytophthora Ramorum1
Proceedings of the Sudden Oak Death Fifth Science Symposium Susceptibility of Larch, Hemlock, Sitka Spruce, and 1 Douglas-fir to Phytophthora ramorum Gary Chastagner,2 Kathy Riley,2 and Marianne Elliott2 Introduction The recent determination that Phytophthora ramorum is causing bleeding stem cankers on Japanese larch (Larix kaempferi (Lam.) Carrière) in the United Kingdom (Forestry Commission 2012, Webber et al. 2010), and that inoculum from this host appears to have resulted in disease and canker development on other conifers, including western hemlock (Tsuga heterophylla (Raf.) Sarg.), Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco), grand fir (Abies grandis (Douglas ex D. Don) Lindl.), and Sitka spruce (Picea sitchensis (Bong.) Carrière), potentially has profound implications for the timber industry and forests in the United States Pacific Northwest (PNW). A clearer understanding of the susceptibility of these conifers to P. ramorum is needed to assess the risk of this occurring in the PNW. Methods An experiment was conducted to examine the susceptibility of new growth on European (L. decidua Mill.), Japanese, eastern (L. laricina (Du Roi) K. Koch), and western larch (L. occidentalis Nutt.); western and eastern hemlock (T. canadensis (L.) Carrière); Sitka spruce; and a coastal seed source of Douglas-fir to three genotypes (NA1, NA2, and EU1) of P. ramorum in 2011. In 2012, a similar experiment was conducted using only the four larch species. Container-grown seedlings or saplings were used in all experiments. Five trees or branches of each species were inoculated with a single isolate of the three genotypes by spraying the foliage with a suspension of zoospores (105/ml). -
Alphabetical Lists of the Vascular Plant Families with Their Phylogenetic
Colligo 2 (1) : 3-10 BOTANIQUE Alphabetical lists of the vascular plant families with their phylogenetic classification numbers Listes alphabétiques des familles de plantes vasculaires avec leurs numéros de classement phylogénétique FRÉDÉRIC DANET* *Mairie de Lyon, Espaces verts, Jardin botanique, Herbier, 69205 Lyon cedex 01, France - [email protected] Citation : Danet F., 2019. Alphabetical lists of the vascular plant families with their phylogenetic classification numbers. Colligo, 2(1) : 3- 10. https://perma.cc/2WFD-A2A7 KEY-WORDS Angiosperms family arrangement Summary: This paper provides, for herbarium cura- Gymnosperms Classification tors, the alphabetical lists of the recognized families Pteridophytes APG system in pteridophytes, gymnosperms and angiosperms Ferns PPG system with their phylogenetic classification numbers. Lycophytes phylogeny Herbarium MOTS-CLÉS Angiospermes rangement des familles Résumé : Cet article produit, pour les conservateurs Gymnospermes Classification d’herbier, les listes alphabétiques des familles recon- Ptéridophytes système APG nues pour les ptéridophytes, les gymnospermes et Fougères système PPG les angiospermes avec leurs numéros de classement Lycophytes phylogénie phylogénétique. Herbier Introduction These alphabetical lists have been established for the systems of A.-L de Jussieu, A.-P. de Can- The organization of herbarium collections con- dolle, Bentham & Hooker, etc. that are still used sists in arranging the specimens logically to in the management of historical herbaria find and reclassify them easily in the appro- whose original classification is voluntarily pre- priate storage units. In the vascular plant col- served. lections, commonly used methods are systema- Recent classification systems based on molecu- tic classification, alphabetical classification, or lar phylogenies have developed, and herbaria combinations of both. -
Phytophthora Ramorum
USDA’s Cooperative State Research, Education, and Extension Service Web site at www.csrees.usda. gov/Extension/index.html, or consult the blue pages of the telephone book under “U.S. Department of Agriculture, Cooperative State Research, Education, United States Department of Agriculture Animal and Plant Health Inspection Service and Extension Service.” A directory of State plant regulatory officials is available on the National Plant Board Web site at www.nationalplantboard.org/ member/index.shtml. Phytophthora For more information and resources concerning ramorum: Figure 6—Employees from the Maryland Department P. ramorum, visit APHIS’ Web site at of Agriculture’s Plant Protection and Weed Management www.aphis.usda.gov/plant_health/plant_pest_info/ Stopping Division (left) and APHIS’ Plant Protection and Quarantine pram/index.shtml ■ program collect leaf samples from rhododendrons during a national survey for P. ramorum in nurseries. (APHIS photo by the Spread R. Anson Eaglin) Program Aid No. 1842 APHIS has enacted strict regulations in 15 coun- ties along the California and Oregon coastline be- The U.S. Department of Agriculture (USDA) prohibits cause P. ramorum causes significant disease in those discrimination in all its programs and activities on the basis forest environments. For nurseries, preventing the of race, color, national origin, age, disability, and where introduction and establishment of the diseases applicable, sex, marital status, familial status, parental P. ramorum causes is the best defense. status, religion, sexual orientation, genetic information, political beliefs, reprisal, or because all or part of an individual’s income is derived from any public assistance program. (Not all prohibited bases apply to all programs.) How You Can Help Persons with disabilities who require alternative means for communication of program information (Braille, large print, If you suspect that shrubs or other plants are infect- audiotape, etc.) should contact USDA’s TARGET Center at ed with P. -
Evolutionary History of Floral Key Innovations in Angiosperms Elisabeth Reyes
Evolutionary history of floral key innovations in angiosperms Elisabeth Reyes To cite this version: Elisabeth Reyes. Evolutionary history of floral key innovations in angiosperms. Botanics. Université Paris Saclay (COmUE), 2016. English. NNT : 2016SACLS489. tel-01443353 HAL Id: tel-01443353 https://tel.archives-ouvertes.fr/tel-01443353 Submitted on 23 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. NNT : 2016SACLS489 THESE DE DOCTORAT DE L’UNIVERSITE PARIS-SACLAY, préparée à l’Université Paris-Sud ÉCOLE DOCTORALE N° 567 Sciences du Végétal : du Gène à l’Ecosystème Spécialité de Doctorat : Biologie Par Mme Elisabeth Reyes Evolutionary history of floral key innovations in angiosperms Thèse présentée et soutenue à Orsay, le 13 décembre 2016 : Composition du Jury : M. Ronse de Craene, Louis Directeur de recherche aux Jardins Rapporteur Botaniques Royaux d’Édimbourg M. Forest, Félix Directeur de recherche aux Jardins Rapporteur Botaniques Royaux de Kew Mme. Damerval, Catherine Directrice de recherche au Moulon Président du jury M. Lowry, Porter Curateur en chef aux Jardins Examinateur Botaniques du Missouri M. Haevermans, Thomas Maître de conférences au MNHN Examinateur Mme. Nadot, Sophie Professeur à l’Université Paris-Sud Directeur de thèse M. -
Erysiphe Aucubae Sp. Nov., a New Powdery Mildew Species on Aucuba Japonica from Japan
mycoscience 57 (2016) 251e254 Available online at www.sciencedirect.com journal homepage: www.elsevier.com/locate/myc Short communication Erysiphe aucubae sp. nov., a new powdery mildew species on Aucuba japonica from Japan Siska A.S. Siahaan, Susumu Takamatsu* Graduate School of Bioresources, Mie University, 1577 Kurima-machiya, Tsu, 514-8507, Japan article info abstract Article history: Aucuba japonica (Japanese aucuba), native to Japan, is an evergreen shrub distributed in the Received 3 February 2016 Japanese Archipelago and cultivated worldwide as an ornamental plant. A powdery mildew Received in revised form with Pseudoidium-type asexual morph commonly occurs on this species. Because of the 4 March 2016 absence of sexual morph (chasmothecia), the taxonomic identity of this fungus has been Accepted 6 March 2016 unclear for a long time. The new species Erysiphe aucubae is proposed for this fungus based Available online 4 April 2016 on molecular phylogenetic analyses and a detailed morphological description of the asexual morph. Keywords: © 2016 The Mycological Society of Japan. Published by Elsevier B.V. All rights reserved. Erysiphaceae Garryaceae Molecular phylogeny Morphology Pseudoidium The genus Aucuba (Garryaceae) consists of species that are asexual morph and host plant, and thus should be re- evergreen shrubs distributed in the Himalayas, southern China examined. Molecular phylogenetic analysis and morpholog- and Japan. Aucuba japonica Thunb. (Japanese aucuba), native to ical observations revealed that this fungus is an undescribed Japan, is distributed at Miyagi prefecture and westward in the species belonging to the genus Erysiphe. Erysiphe aucubae S. main island, Shikoku, Kyushu, and Ryukyu islands of the Jap- Takam. -
Phytophthora Ramorum and P. Kernoviae Diseases on Bilberry
Phytophthora ramorum and Phytophthora kernoviae diseases on bilberry (Vaccinium myrtillus) A threat to our woodlands, heathlands and historic gardens Very early symptom showing a brown lesion developing around the leaf node What is it and where is it found? Phytophthora is a devastating fungus-like organism that causes damage to a wide range of trees and plants. Recently two species of Phytophthora – Phytophthora ramorum and Phytophthora kernoviae – have been causing damage to our environment. Why the concern? PLANT DISEASE FACTSHEET Initial findings of the disease were predominantly confined to ornamental plants in nurseries. Since then, findings in the wider environment have continued to spread across the UK after initially being concentrated in the South West. With a large and varied host range, if left unchecked they may change our landscape with the loss of many trees, shrubs and heathland plants. Where is it found? P. ramorum was first identified in 1995 causing the death of oak and tanoak trees in the coastal counties of California in the USA. It was first detected in the UK in 2002 in the nursery trade and has since spread to the wider environment including historic gardens, parks, woodlands and heathlands. The first finding of P. ramorum on the heathland plant Vaccinium myrtillus (bilberry/blaeberry) in the wild was confirmed in January 2009. More recently, in August 2009, the pathogen was identified on Japanese larch trees at sites in South West England. P. kernoviae was first discovered in 2003 causing severe damage to rhododendron and beech trees in Cornwall. The disease has been found in woodlands, gardens and a small number of nurseries with outbreaks mainly confined to the South West. -
Phytophthora Ramorum: a Guide for Oregon Nurseries Hazel A
OREGON STATE UNIVERSITY EXTENSION SERVICE Phytophthora Ramorum: A Guide for Oregon Nurseries Hazel A. Daniels, Jennifer Parke, Jay W. Pscheidt and Chris Benemann Summary ¾ Phytophthora ramorum became a federally quarantined pathogen in 2005. ¾ This pathogen causes the diseases known as ramorum leaf and twig blight, and sudden oak death. ¾ In the United States, the regulated host list includes more than 150 plant species in 37 genera. ¾ Repeated shipments of P. ramorum-infested plants by nurseries have resulted in spread of the disease. In 2019, for example, nationwide trace investigations were triggered due to the detection of P. ramorum positive plants in commerce. The infected plants originated from two nurseries in Washington state and Canada and were shipped to 18 states. Photo: Jennifer Parke, © Oregon State University ¾ Nurseries should be vigilant in monitoring plant Figure 1: Ramorum shoot dieback and leaf blight on Viburnum x material brought in from external sources. bodnantense ‘Dawn’. ¾ Management efforts in Pacific Northwest nurseries (Quercus spp.) in the San Francisco Bay Area were dying are focused on eradicating the pathogen when it is from a new disease, sudden oak death. The cause of both found and preventing new infections. sudden oak death and the nursery diseases was found to be Phytophthora ramorum, which was formally described ¾ If P. ramorum is found in your nursery, and you ship in 2001. material outside of Oregon, you will be required to sign a cooperative agreement with the United By 2001, P. ramorum had spread to 10 counties in States Department of Agriculture and Oregon coastal California. The pathogen was also detected Department of Agriculture. -
Emergence of the Sudden Oak Death Pathogen Phytophthora Ramorum
Review Emergence of the sudden oak death pathogen Phytophthora ramorum 1 2 3 4 Niklaus J. Gru¨ nwald , Matteo Garbelotto , Erica M. Goss , Kurt Heungens and 5 Simone Prospero 1 Horticultural Crops Research Laboratory, United States Department of Agriculture (USDA) Agricultural Research Service, Corvallis, OR 97330, USA 2 Department of Environmental Science, Policy and Management, University of California, Berkeley, CA 94720, USA 3 Emerging Pathogens Institute and Department of Plant Pathology, University of Florida, Gainesville, FL 32611, USA 4 Institute for Agricultural and Fisheries Research (ILVO), Plant Sciences Unit – Crop Protection, 9820 Merelbeke, Belgium 5 Swiss Federal Institute for Forest, Snow and Landscape Research WSL, 8903 Birmensdorf, Switzerland The recently emerged plant pathogen Phytophthora can only be formed when the two mating types encounter ramorum is responsible for causing the sudden oak and mate. P. ramorum is heterothallic and produces death epidemic. This review documents the emergence sporangia and chlamydospores. Oospores have not been of P. ramorum based on evolutionary and population observed in the known geographic distribution of genetic analyses. Currently infection by P. ramorum P. ramorum. occurs only in Europe and North America and three Phytophthora ramorum is adapted to cool temperatures clonal lineages are distinguished: EU1, NA1 and NA2. with optimal growth at 20 8C [3]. The life cycle of P. Ancient divergence of these lineages supports a scenario ramorum resembles that of other splash-dispersed Phy- in which P. ramorum originated from reproductively tophthora species [1]. Deciduous sporangia are formed on isolated populations and underwent at least four global the surface of infected leaves or twigs and, depending upon migration events. -
Impacts of Phytophthora Ramorum Canker and Other Agents in Sonoma County Forests1
Impacts of Phytophthora ramorum Canker and Other Agents in Sonoma County 1 Forests Tedmund J. Swiecki2 and Elizabeth A. Bernhardt2 Abstract To study impacts of sudden oak death (SOD), a lethal bark canker disease caused by Phytophthora ramorum, we established permanent plots in Sonoma County forest types at risk of SOD. Baseline stand and tree health data were collected in 2001 and the plots were reassessed in 2004. The 250 plots (0.02 ha each) were located at 11 study locations in stands containing Quercus agrifolia, Q. kelloggii, or Lithocarpus densiflorus as the dominant hardwood species. By 2004, P. ramorum canker symptoms developed at two locations that lacked symptoms in 2001, leading to new tree mortality at one of these locations. Between 2001 and 2004, plot level incidence of P. ramorum canker increased from 29 to 40 percent of plots containing L. densiflorus and from 2 to 10 percent in plots containing Q. kelloggii. Plots with Q. agrifolia showed a slight drop in P. ramorum canker (from 9 to 7 percent of plots) due to apparent symptom remission in trees at one location. Between 2001 and 2004, the percentage of trees with P. ramorum canker symptoms increased at three of four locations with symptomatic SOD canker hosts. Mortality due to both P. ramorum and other agents increased at 9 of 11 study locations between 2001 and 2004. Among SOD canker hosts that died during this period, mortality was due to P. ramorum in 4 of 16 Q. kelloggii, 7 of 18 Q. agrifolia, and 18 of 50 L. densiflorus. In most study locations, annual background mortality unrelated to P.