Integrated Eicosanoid Lipidomics and Gene Expression Reveal Decreased
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N-Glycan Trimming in the ER and Calnexin/Calreticulin Cycle
Neurotransmitter receptorsGABA and A postsynapticreceptor activation signal transmission Ligand-gated ion channel transport GABAGABA Areceptor receptor alpha-5 alpha-1/beta-1/gamma-2 subunit GABA A receptor alpha-2/beta-2/gamma-2GABA receptor alpha-4 subunit GABAGABA receptor A receptor beta-3 subunitalpha-6/beta-2/gamma-2 GABA-AGABA receptor; A receptor alpha-1/beta-2/gamma-2GABA receptoralpha-3/beta-2/gamma-2 alpha-3 subunit GABA-A GABAreceptor; receptor benzodiazepine alpha-6 subunit site GABA-AGABA-A receptor; receptor; GABA-A anion site channel (alpha1/beta2 interface) GABA-A receptor;GABA alpha-6/beta-3/gamma-2 receptor beta-2 subunit GABAGABA receptorGABA-A receptor alpha-2receptor; alpha-1 subunit agonist subunit GABA site Serotonin 3a (5-HT3a) receptor GABA receptorGABA-C rho-1 subunitreceptor GlycineSerotonin receptor subunit3 (5-HT3) alpha-1 receptor GABA receptor rho-2 subunit GlycineGlycine receptor receptor subunit subunit alpha-2 alpha-3 Ca2+ activated K+ channels Metabolism of ingested SeMet, Sec, MeSec into H2Se SmallIntermediateSmall conductance conductance conductance calcium-activated calcium-activated calcium-activated potassium potassium potassiumchannel channel protein channel protein 2 protein 1 4 Small conductance calcium-activatedCalcium-activated potassium potassium channel alpha/beta channel 1 protein 3 Calcium-activated potassiumHistamine channel subunit alpha-1 N-methyltransferase Neuraminidase Pyrimidine biosynthesis Nicotinamide N-methyltransferase Adenosylhomocysteinase PolymerasePolymeraseHistidine basic -
GPCR Expression in Cancer Cells and Tumors Identifies New
fphar-09-00431 May 17, 2018 Time: 16:38 # 1 ORIGINAL RESEARCH published: 22 May 2018 doi: 10.3389/fphar.2018.00431 GPCRomics: GPCR Expression in Cancer Cells and Tumors Identifies New, Potential Biomarkers and Therapeutic Targets Paul A. Insel1,2*†, Krishna Sriram1†, Shu Z. Wiley1, Andrea Wilderman1, Trishna Katakia1, Thalia McCann1, Hiroshi Yokouchi1, Lingzhi Zhang1, Ross Corriden1, Dongling Liu1, Michael E. Feigin3, Randall P. French4,5, Andrew M. Lowy4,5 and Fiona Murray1,2,6† 1 Department of Pharmacology, University of California, San Diego, San Diego, CA, United States, 2 Department of Medicine, University of California, San Diego, San Diego, CA, United States, 3 Department of Pharmacology and Therapeutics, Roswell Edited by: Park Comprehensive Cancer Center, Buffalo, NY, United States, 4 Department of Surgery, University of California, San Diego, Ramaswamy Krishnan, San Diego, CA, United States, 5 Moores Cancer Center, University of California, San Diego, San Diego, CA, United States, Harvard Medical School, 6 School of Medicine, Medical Sciences and Nutrition, University of Aberdeen, Aberdeen, United Kingdom United States Reviewed by: G protein-coupled receptors (GPCRs), the largest family of targets for approved drugs, Kevin D. G. Pfleger, Harry Perkins Institute of Medical are rarely targeted for cancer treatment, except for certain endocrine and hormone- Research, Australia responsive tumors. Limited knowledge regarding GPCR expression in cancer cells likely Deepak A. Deshpande, has contributed to this lack of use of GPCR-targeted drugs as cancer therapeutics. Thomas Jefferson University, United States We thus undertook GPCRomic studies to define the expression of endoGPCRs *Correspondence: (which respond to endogenous molecules such as hormones, neurotransmitters and Paul A. -
Cytochrome P450
Cytochrome P450 • R.T. Williams - in vivo, 1947. Brodie – in vitro, from late 40s till the 60s. • Cytochrome P450 enzymes (hemoproteins) play an important role in the intra-cellular metabolism. • Exist in prokaryotic and eukaryotic (plants insects fish and mammal, as well as microorganisms) • Different P450 enzymes can be found in almost any tissue: liver, kidney, lungs and even brain. • Plays important role in drugs metabolism and xenobiotics. P450 Reactions • Cytochrome P450 enzymes catalyze thousands of different reaction. • Oxidative reactions. SH + O2 + NADPH + H+ SOH + H2O + NADPH+ • The protein structure is believed to determines the catalytic specificity through complementarity to the transition state. General Features of Cytochrome P450 Catalysis 1. Substrate binding (presumably near the site of the heme ligand) 2. 1-electorn reduction of the iron by flavprotein NADPH cytochrome P450 reductase 3. Reaction of ferrous iron with O2 to yield an unstable FeO2 complex 4. Addition of the second electron from NADPH or cytochrome b5 5. Heterolytic scission of the FeO-O(H) bond to generate a formal (FeO)3+ 6. Oxidation of the substrate. 1. Formal abstraction of hydrogen atom or electron 2. Radical recombination 7. Release of the product. • Oxidative Reactions • Carbon Hydroxylation • Heteroatom Hydroxylation • Heteroatom Release • Rearangement Related to Heteroatom Oxidations • Oxidation of π-System • Hypervalent Oxygen substrate • Reductive Reactions Humans CYP450 -18 families, 43 subfamilies • CYP1 drug metabolism (3 subfamilies, 3 genes, -
Tłumaczenie Patentu Europejskiego (19) Pl (11) Pl/Ep 3105317 Polska
RZECZPOSPOLITA (12) TŁUMACZENIE PATENTU EUROPEJSKIEGO (19) PL (11) PL/EP 3105317 POLSKA (13) T3 (96) Data i numer zgłoszenia patentu europejskiego: (51) Int.Cl. 13.02.2015 15706399.1 A61K 35/17 (2015.01) C12N 5/0783 (2010.01) (97) O udzieleniu patentu europejskiego ogłoszono: 19.09.2018 Europejski Biuletyn Patentowy 2018/38 Urząd Patentowy EP 3105317 B1 Rzeczypospolitej Polskiej (54) Tytuł wynalazku: KOMÓRKI DO IMMUNOTERAPII ZAPROJEKTOWANE DO CELOWANIA ANTYGENU OBECNEGO ZARÓWNO NA KOMÓRKACH ODPORNOŚCIOWYCH, JAK I KOMÓRKACH PATOLOGICZNYCH (30) Pierwszeństwo: 14.02.2014 DK 201470076 (43) Zgłoszenie ogłoszono: 21.12.2016 w Europejskim Biuletynie Patentowym nr 2016/51 (45) O złożeniu tłumaczenia patentu ogłoszono: 28.02.2019 Wiadomości Urzędu Patentowego 2019/02 (73) Uprawniony z patentu: Cellectis, Paris, FR (72) Twórca(y) wynalazku: PHILIPPE DUCHATEAU, Draveil, FR T3 LAURENT POIROT, Paris, FR (74) Pełnomocnik: rzecz. pat. Magdalena Tagowska PATPOL 3105317 KANCELARIA PATENTOWA SP. Z O.O. ul. Nowoursynowska 162 J 02-776 Warszawa PL/EP Uwaga: W ciągu dziewięciu miesięcy od publikacji informacji o udzieleniu patentu europejskiego, każda osoba może wnieść do Europejskiego Urzędu Patentowego sprzeciw dotyczący udzielonego patentu europejskiego. Sprzeciw wnosi się w formie uzasadnionego na piśmie oświadczenia. Uważa się go za wniesiony dopiero z chwilą wniesienia opłaty za sprzeciw (Art. 99 (1) Konwencji o udzielaniu patentów europejskich). EP 3 105 317 B1 Opis Dziedzina wynalazku [0001] Niniejszy wynalazek dotyczy sposobów opracowywania genetycznie skonstruowanych, korzystnie niealloreaktywnych, komórek T do immunoterapii, które są obdarzone chimerycznymi receptorami 5 antygenowymi ukierunkowanymi na marker antygenowy, który jest wspólny zarówno dla komórek patologicznych, jak i komórek odpornościowych (np. CD38). [0002] Sposób obejmuje ekspresję CAR skierowanego przeciwko temu markerowi antygenowemu i inaktywację genów w komórkach T przyczyniających się do obecności wspomnianego markera antygenowego na powierzchni wspomnianych komórek T. -
IHC‐Plustm Nb Bod
May 2011 Catalog IHC‐plusTM Anbodies …..because seeing is believing. IHC-plus™ Antibodies ...because seeing is believing! LSBio is the world's largest supplier of Immunohistochemistry (IHC) antibodies with more than 27,000 having been tested and approved for use in IHC. More than 4,500 of these antibodies have been further validated specifically for use under LSBio's standardized IHC conditions against formalin-fixed paraffin-embedded human tissues. These are LSBio's premier IHC-plus™ brand antibodies. Visit ww.lsbio.com to learn more about our IHC validation procedure or for the most up to data list of IHC-plusTM antibodies. Host/Reactivity Application CD44 Antigen (CD44) Synaptophysin (SYP) Caspase 3 (CASP3) LS-B1862, IHC, Human skin LS-B3393, IHC, Human adrenal LS-B3404, IHC, Human spleen Clonality Solute Carrier Family 5 (sodium/glucose Histone Deacetylase 1 (HDAC1) ATP-Binding Cassette, Sub-Family B (Mdr/Tap), Cotransporter), Member 10 (SLC5A10) LS-B3438, IHC, Human colon Member 1 (Abcb1) LS-A2800, IHC, Human skeletal muscle LS-B1448, IHC, Human kidney Cyclin D1 (CCND1) Integrin, Alpha X (Antigen CD11C (P150), Alpha Transient Receptor Potential Cation Channel, LS-B3452, IHC, Human testis Polypeptide) (ITGAX) Subfamily A, Member 1 (TRPA1) LS-A9382, IHC, Human tonsil LS-A9098, IHC, Human dorsal root ganglia Host/Species Reactivity Abbreviation Species Av Avian Ba Baboon Bo Bovine Ca Cat Ch Chimpanzee Ck Chicken Do Dog Dr Drosophila Ec E. coli Fe Ferret Fi Atlantic salmon Fr Frog Gp Guinea Pig Gt Goat Ha Hamster Ho Horse Hu Human Ma -
Identification of a Homozygous Recessive Variant in PTGS1 Resulting in a Congenital Ferrata Storti Foundation Aspirin-Like Defect in Platelet Function
Platelet Biology & its Disorders ARTICLE Identification of a homozygous recessive variant in PTGS1 resulting in a congenital Ferrata Storti Foundation aspirin-like defect in platelet function Melissa V. Chan,1* Melissa A. Hayman,1* Suthesh Sivapalaratnam,2,3,4* Marilena Crescente,1 Harriet E. Allan,1 Matthew L. Edin,5 Darryl C. Zeldin,5 Ginger L. Milne,6 Jonathan Stephens,2,3 Daniel Greene,2,3,7 Moghees Hanif,4 Valerie B. O’Donnell,8 Liang Dong,9 Michael G. Malkowski,9 Claire Lentaigne,10,11 Katherine Wedderburn,2 Matthew Stubbs,10,11 Kate Downes,2,3,12 Willem H. Ouwehand,2,3,7,13 Ernest Turro,2,3,7,12 Daniel P. Hart,1,4 Kathleen Freson,14 Michael A. Laffan,10,11# Haematologica 2021 and Timothy D. Warner1# Volume 106(5):1423-1432 1The Blizard Institute, Barts & The London School of Medicine and Dentistry, Queen Mary University of London, London, UK; 2Department of Hematology, University of Cambridge, Cambridge, UK; 3National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge, UK; 4Department of Hematology, Barts Health National Health Service Trust, London, UK; 5National Institutes of Health, National Institute of Environmental Health Sciences, Research Triangle Park, Durham, NC, USA; 6Division of Clinical Pharmacology, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA; 7Medical Research Council Biostatistics Unit, Cambridge Institute of Public Health, Cambridge Biomedical Campus, Cambridge, UK; 8Systems Immunity Research Institute, and Division of Infection and Immunity, School -
AN EXAMINATION of the UTILITY of LARGE GENOMIC DATASETS for GENETIC MONITORING: an ATLANTIC SALMON (Salmo Salar) CASE STUDY
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Differential Expression of Prostaglandin I2 Synthase Associated with Arachidonic Acid Pathway in the Oral Squamous Cell Carcinoma
Hindawi Journal of Oncology Volume 2018, Article ID 6301980, 13 pages https://doi.org/10.1155/2018/6301980 Research Article Differential Expression of Prostaglandin I2 Synthase Associated with Arachidonic Acid Pathway in the Oral Squamous Cell Carcinoma Anelise Russo ,1 Patr-cia M. Biselli-Chicote ,1 Rosa S. Kawasaki-Oyama,1 Márcia M. U. Castanhole-Nunes,1 José V. Maniglia,2 Dal-sio de Santi Neto,3 Érika C. Pavarino ,1 and Eny M. Goloni-Bertollo 1 1 Department of Molecular Biology: Biological and Genetics and Molecular Biology Research Unit – UPGEM, Sao˜ Jose´ do Rio Preto Medical School – FAMERP, Sao˜ Jose´ do Rio Preto, SP 15090-000, Brazil 2Department of Otorhinolaryngology and Head and Neck Surgery, FAMERP, Sao˜ Jose´ do Rio Preto, SP 15090-000, Brazil 3Department of Pathology, FAMERP, Sao˜ Jose´ do Rio Preto, SP 15090-000, Brazil Correspondence should be addressed to Anelise Russo; [email protected] and Eny M. Goloni-Bertollo; [email protected] Received 17 July 2018; Accepted 16 October 2018; Published 8 November 2018 Academic Editor: Tomas R. Chauncey Copyright © 2018 Anelise Russo et al. Tis is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Introduction. Diferential expression of genes encoding cytochrome P450 (CYP) and other oxygenases enzymes involved in biotransformation mechanisms of endogenous and exogenous compounds can lead to oral tumor development. Objective.We aimed to identify the expression profle of these genes, searching for susceptibility biomarkers in oral squamous cell carcinoma. -
Prostaglandin Terminal Synthases As Novel Therapeutic Targets
No. 9] Proc. Jpn. Acad., Ser. B 93 (2017) 703 Review Prostaglandin terminal synthases as novel therapeutic targets † By Shuntaro HARA*1, (Communicated by Shigekazu NAGATA, M.J.A.) Abstract: Non-steroidal anti-inflammatory drugs (NSAIDs) exert their anti-inflammatory and anti-tumor effects by reducing prostaglandin (PG) production via the inhibition of cyclooxygenase (COX). However, the gastrointestinal, renal and cardiovascular side effects associated with the pharmacological inhibition of the COX enzymes have focused renewed attention onto other potential targets for NSAIDs. PGH2, a COX metabolite, is converted to each PG species by species-specific PG terminal synthases. Because of their potential for more selective modulation of PG production, PG terminal synthases are now being investigated as a novel target for NSAIDs. In this review, I summarize the current understanding of PG terminal synthases, with a focus on microsomal PGE synthase-1 (mPGES-1) and PGI synthase (PGIS). mPGES-1 and PGIS cooperatively exacerbate inflammatory reactions but have opposing effects on carcinogenesis. mPGES-1 and PGIS are expected to be attractive alternatives to COX as therapeutic targets for several diseases, including inflammatory diseases and cancer. Keywords: prostaglandin, prostacyclin, NSAIDs, inflammatory reaction, carcinogenesis fatty acids, and they have a broad range of biological 1. Introduction activities.1) Prostanoids include what are sometimes Prostanoids are cyclic and oxygenated metabo- referred to as the “classical” prostaglandins (PGs), lites comprised of B-3 and B-6 20-carbon essential such as PGD, PGE, and PGF (all of which have a prostanoic acid backbone), as well as prostacyclin fi *1 Division of Health Chemistry, Department of Healthcare (PGI2) and thromboxane. -
Relationship Between CYP17A1 Genetic Polymorphism and Coronary
Dai et al. Lipids in Health and Disease (2015) 14:16 DOI 10.1186/s12944-015-0007-4 RESEARCH Open Access Relationship between CYP17A1 genetic polymorphism and coronary artery disease in a Chinese Han population Chuan-Fang Dai, Xiang Xie*, Yi-Ning Yang, Xiao-Mei Li, Ying-Ying Zheng, Zhen-Yan Fu, Fen Liu, Bang-Dang Chen, Min-Tao Gai and Yi-Tong Ma* Abstract Background: CYP17A1 gene encodes P450c17 proteins, which is a key enzyme that catalyzes the formation of sex hormones. Many clinical studies showed that sex hormones levels play an important role in the pathogenesis of coronary artery disease (CAD). However, the relationship between CYP17A1 genetic polymorphisms and CAD remains unclear. The aim of this study was to investigate the association of CYP17A1 genetic polymorphisms with CAD in a Han population of China. Methods: A total of 997 people include 490 patients and 507 controls were selected for the present study. Five single-nucleotide polymorphisms (SNPs) (rs4919686, rs1004467, rs4919687, rs10786712, and rs2486758) were genotyped by using the real-time PCR (TaqMan) method. Results: For men, the rs10786712 was found to be associated with CAD in a recessive model (P = 0.016), after adjustment of the major confounding factors, the significant difference was retained (OR = 1.644, 95% confidence interval [CI]: 1.087-2.488, P = 0.019). For women, the rs1004467 was also found to be associated with CAD in a dominant model (P = 0.038), the difference remained statistically significant after multivariate adjustment (OR = 1.623, 95% CI: 1.023-2.576, P = 0.040). The distribution of rs4919687 genotypes showed a significant difference between CAD and control participants in a recessive model (P = 0.019), the significant difference was retained after adjustment for covariates (OR = 0.417, 95% CI: 0.188-0.926, P = 0.032). -
PGE Inhibits Spermatogonia Differentiation in Zebrafish
244 1 Journal of D Crespo et al. PGE2 inhibits spermatogonial 244:1 163–175 Endocrinology differentiation RESEARCH PGE2 inhibits spermatogonia differentiation in zebrafish: interaction with Fsh and an androgen Diego Crespo1, Moline Severino Lemos2, Yu Ting Zhang3,4, Diego Safian1, Birgitta Norberg5, Jan Bogerd1 and Rüdiger W Schulz1,6 1Reproductive Biology Group, Division Developmental Biology, Department Biology, Science Faculty, Utrecht University, Utrecht, The Netherlands 2Laboratory of Cell Biology, Department of Morphology, Institute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte, Minas Gerais, Brazil 3State Key Laboratory of Marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University, Fujian, People’s Republic of China 4Institute of Oceanography, Minjiang University, Fuzhou, People’s Republic of China 5Institute of Marine Research, Austevoll Research Station, Storebø, Norway 6Research Group Reproduction and Developmental Biology, Institute of Marine Research, Bergen, Norway Correspondence should be addressed to R W Schulz: [email protected] Abstract Changes in zebrafish testicular gene expression induced by follicle-stimulating Key Words hormone (Fsh) or anti-Mullerian hormone (Amh) suggested that Amh inhibition and f Fsh Fsh stimulation of spermatogenesis involved up and downregulation, respectively, f androgen of prostaglandin (PG) signaling. We found that Sertoli cells contacting type A f prostaglandin E2 undifferentiated (Aund) and differentiating (Adiff) spermatogonia expressed a key enzyme f spermatogonia of PG production (Ptgs2); previous work showed that Sertoli cells contacting Adiff and B f proliferation spermatogonia and spermatocytes showed ptges3b expression, an enzyme catalyzing f differentiation PGE2 production. In primary testis tissue cultures, PGE2, but not PGD2 or PGF2α, reduced f zebrafish the mitotic activity of Adiff and their development into B spermatogonia. -
Epigenetics Override Pro-Inflammatory PTGS
Cebola et al. Clinical Epigenetics (2015) 7:74 DOI 10.1186/s13148-015-0110-4 RESEARCH Open Access Epigenetics override pro-inflammatory PTGS transcriptomic signature towards selective hyperactivation of PGE2 in colorectal cancer Inês Cebola1,5, Joaquin Custodio1,6, Mar Muñoz1, Anna Díez-Villanueva1, Laia Paré2, Patricia Prieto3, Susanna Aussó2, Llorenç Coll-Mulet1, Lisardo Boscá3, Victor Moreno2,4 and Miguel A. Peinado1* Abstract Background: Misregulation of the PTGS (prostaglandin endoperoxide synthase, also known as cyclooxygenase or COX) pathway may lead to the accumulation of pro-inflammatory signals, which constitutes a hallmark of cancer. To get insight into the role of this signaling pathway in colorectal cancer (CRC), we have characterized the transcriptional and epigenetic landscapes of the PTGS pathway genes in normal and cancer cells. Results: Data from four independent series of CRC patients (502 tumors including adenomas and carcinomas and 222 adjacent normal tissues) and two series of colon mucosae from 69 healthy donors have been included in the study. Gene expression was analyzed by real-time PCR and Affymetrix U219 arrays. DNA methylation was analyzed by bisulfite sequencing, dissociation curves, and HumanMethylation450K arrays. Most CRC patients show selective transcriptional deregulation of the enzymes involved in the synthesis of prostanoids and their receptors in both tumor and its adjacent mucosa. DNA methylation alterations exclusively affect the tumor tissue (both adenomas and carcinomas), redirecting the transcriptional deregulation to activation of prostaglandin E2 (PGE2) function and blockade of other biologically active prostaglandins. In particular, PTGIS, PTGER3, PTGFR,andAKR1B1 were hypermethylated in more than 40 % of all analyzed tumors. Conclusions: The transcriptional and epigenetic profiling of the PTGS pathway provides important clues on the biology of the tumor and its microenvironment.