bioRxiv preprint doi: https://doi.org/10.1101/237347; this version posted January 7, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Cell type-specific CLIP reveals that NOVA regulates 2 cytoskeleton interactions in motoneurons. 3 4 Yuan Yuan1, Shirley Xie1, Jennifer C. Darnell1, Andrew J. Darnell1, Yuhki Saito1,2, 5 Hemali Phatnani3,5, Elisabeth Murphy1, Chaolin Zhang4,5,6, Tom Maniatis5,6, and Robert 6 B. Darnell1,2,3* 7 8 1Laboratory of Molecular Neuro-Oncology, 2Howard Hughes Medical Institute, The 9 Rockefeller University, 1230 York Ave. NY, NY 10065 USA* 10 3New York Genome Center, 101 Avenue of the Americas, NY, NY 10013 USA* 11 4Department of Systems Biology, 5Department of Biochemistry and Molecular Biophysics, 12 6Center for Motor Neuron Biology and Disease, Columbia University, New York NY 13 10032, USA 14 *Correspondence author: Robert B. Darnell, M.D., Ph.D. 15 Laboratory of Molecular Neuro-Oncology 16 The Rockefeller University 17 Howard Hughes Medical Institute 18 Box 226 19 1230 York Avenue 20 New York, NY 10021 21 Phone: (212) 327-7460 22 Fax: (212) 327-7109 23 e-mail:
[email protected] 24 25 26 27 28 MOTONEURON-SPECIFIC CLIP 29 Key words: cell-type specific, CLIP, motoneuron, NOVA, RNA, alternative splicing, 30 alternative last exon usage, septin 31 32 1 bioRxiv preprint doi: https://doi.org/10.1101/237347; this version posted January 7, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder.