Evolution After Darwin

Total Page:16

File Type:pdf, Size:1020Kb

Evolution After Darwin BIOLOGY & MEDICINE_Evolutionary Biology Evolution after Darwin Darwin’s pioneering work On the Origin of Species, in which he first formulated the principles of his theory of evolution, was published 150 years ago. This theory changed the thinking in biology significantly and influenced almost all areas of biological research. What could be more appropriate, then, than to stage a Max Planck Symposium on Evolutionary Biology in the Darwin Year 2009. TEXT CHRISTINA BECK volution goes on all the time.” Lenski’s studies began with twelve It was only after 33,000 generations This is the credo of Richard E. identical populations of an E. coli that a variant (Cit+) capable of exploit- Lenski of Michigan State Uni- strain. His objective was to find out ing citrate emerged – a fitness advan- versity. The American scientist whether random mutations that oc- tage that resulted in a clear increase in tracks evolution in the labora- curred in the past facilitate the evolu- the size of the population. So was this E tory with his team: some 21 years ago tion of key innovations. an extremely rare mutation, which he embarked on a long-term experi- would explain why its arrival was so ment with E. coli. Bacteria provide BILLIONS OF MUTATIONS delayed? Or was it a simple mutation good conditions for such experi- that had to be preceded by other muta- ments, as a bacterial population grows “One of the big advantages is that you tions in order for it to be phenotypical- to billions of cells within a very short can freeze bacteria and in this way ob- ly effective? “We tested these hypothe- time. Studying evolution in action tain fossil images,” explains the biolo- ses in experiments in which we calls for large numbers – it’s like play- gist. The bacteria grew on a medium repeated the evolution from different ing dice: if you roll the dice a hundred with a limited supply of glucose, starting points in the population his- times, you will almost certainly get a which also contained citrate. Howev- tory,” explained Lenski. six. Lenski hopes to overcome coinci- er, E. coli cannot use this citrate as a Not a single Cit+ mutant occurred dence through the sheer volume of source of carbon under oxygen condi- among the ten trillion ancestor cells cells and generations alone (“Our lab tions. “In the course of 30,000 gener- in the repeat experiments, either. All has produced 45,000 generations of ations, not a single generation devel- 19 Cit+ mutants obtained by the sci- bacteria so far”). His ultimate aim is to oped the ability to exploit citrates, entists originated from later clones. A identify the events that result in the even though each population had bil- sequence comparison of Cit+ and Cit advent of something new and original lions of mutations,” said Lenski. mutants showed that the necessary ci- in evolution. trate transporter was generated only 66 MaxPlanckResearch 3 | 09 The research studies presented at the Max Planck Symposium on Evolutionary Biology examined very different animal species including the beach mouse, which is a native of the US, cichlids from east Africa, the European great tit, and primates, including chimpanzees and us humans (l-r). when the corresponding gene was Hopi Hoekstra from Harvard Univer- to their conspecifics inland, they have able to recruit a promoter – the start sity in her lecture “From Mice to Mol- lighter-colored and significantly re- sequence that made it possible to read ecules.” Convergence is a fascinating duced coat pigmentation on their fac- it in the first place. And this, in turn, phenomenon in evolution: unrelated es, flanks and tails. The fact that the had become possible only as a result species develop similar characteristics lighter-colored coat provides better of the duplication of another gene. or a similar appearance in response to camouflage in the sand dunes was The evolution of this phenotype was similar selection pressures. But does demonstrated by a simple experiment thus dependent on the population’s this phenotypic convergence imply in which the researchers placed a fake “genetic history.” genetic convergence? In other words: dark mouse coat in the dunes: it was Are the same genes actually responsi- immediately carried off and then later HOW MICE ACQUIRE A ble for the development of similar abandoned by a predator (probably an DIFFERENT COAT COLOR forms and patterns? To find out, owl or a hawk) when it realized it had Hoekstra and her team studied coat been tricked. Genetic research provides the strong- color variants in natural mouse popu- “At least three genes – Mc1r, Agou- est proof of evolutionary theory to- lations. ti and Corin – influence coat color,” re- day. Charles Darwin could not have The mouse species Peromyscus po- ported Hoekstra. The Melanocortin-1 even guessed at such things. Indeed, lionotus populates fallow fields in the receptor, Mc1r for short, plays a key the door to a more profound under- southeastern US. However, popula- role here in that it controls whether standing of evolution opened only tions are also found in the bright sand the dark pigment eumelanin or the when James Watson and Francis Crick dunes along the Gulf coast and more light pigment pheomelanin is pro- succeeded in decoding DNA in 1953. than 300 kilometers away on the At- duced. The researcher succeeded in “What can genes tell us about evolu- lantic coast near Florida. They are demonstrating that the exchange of a Photos: Joel Sartore – Joelsartore.com/Vincent Musi/iStockphoto (2) tionary adaptation processes?” asked known as beach mice and, compared single nucleotide (a T instead of a C) in 3 | 09 MaxPlanckResearch 67 BIOLOGIE & MEDIZIN_Evolutionsbiologie left The coffee breaks provided an opportunity for lively conversation and exchange, as seen here between Dieter Ebert from the University of Basle (center) and David G. Heckel from the Max Planck Institute for Chemical Ecology. right In her lecture “From Mice to Molecules,” Hopi Hoekstra explained the genetic mechanisms that control adaptations in the coat color of beach mice. the sequence of the receptor gene in Using the Galapagos finches, Darwin been thought. Natural selection, that the mouse population originating had already clearly demonstrated the apparently endlessly cumbersome and from the Gulf coast altered the effec- fact that patterns, colors and forms slow mechanism of evolution, can tiveness of the receptor and hence can change as a result of evolution- clearly create new conditions within a changed the coat color. Arginine is ary adaptation processes. His draw- single generation. now inserted in position 65 in the ami- ings on this topic can still be found In another exciting finding, the re- no acid chain instead of cystein, and in every school science textbook to- searcher couple discovered that a new- this alters both the bonding of ligands day, and show how the finches devel- ly migrated larger species of bird could and the potential of the receptor for oped a thick beak for biting seeds, a make better use of the thicker seeds signal transmission. “Such Mc1r muta- longer and sharper one for flowers, than the long-established birds. The tions have also been observed in mam- and a short, pointed beak to access established residents responded to the moths,” added Hoekstra. tiny insects in rock crevices. As the arrival of the new competition through famous naturalist wrote in his travel adaptation – in precisely the opposite WHY DARWIN’S FINCHES APPEAR report of 1839: “Seeing this grada- direction as before, in that they now IN EVERY TEXTBOOK tion and diversity of structure in one developed smaller beaks. This meant small, intimately related group of they could access food sources in rock Interestingly, the lighter-colored coat birds, one might really fancy that crevices, for example, which their in the mice from the Atlantic coast from an original paucity of birds in thick-beaked rivals could not reach. could not be explained by the same this archipelago, one species had This adaptation, too, was quantifiable allele – the latter did not occur in been taken and modified for differ- in one generation of the birds. The re- them at all, nor could the researchers ent ends.” searchers call this phenomenon mi- find any new mutations in the Mc1r Rosemary and Peter Grant from croevolution. gene that would have influenced the Princeton succeeded in demonstrat- activity of the receptor. “Our findings ing the effect of natural selection di- HOW GREAT TITS FOLLOW show that a pigmentation pattern rectly. They studied the beaks of CLIMATE CHANGE that arose convergently in different ground finches on the island of mice populations that actually devel- Daphne Major and, at the same time, Other mechanisms also exist that oped under very similar conditions is recorded their food sources. In years could be the result of adaptation proc- clearly the result of completely differ- of extreme drought, a large part of the esses. Based on a long-term study car- ent genetic mechanisms,” said Hoek- population died and only the finches ried out in the UK, Ben Sheldon from stra. So there are different molecular with larger beaks survived because the University of Oxford demonstrat- solutions for attaining the same phe- they could crack thicker and harder ed that great tits are so plastic, in oth- notype under comparable environ- seeds when the seeds they usually fed er words adaptable, in their behavior mental conditions. The combination on became scarce. The beak shape is that the population as a whole is suc- of different alleles of the aforemen- not only inherited, as the Grants dis- cessfully adapting to the rapidly tioned genes Mc1r, Agouti and Corin covered. It also becomes established emerging changes in the climate.
Recommended publications
  • Ricardo Mallarino Howard Hughes Medical Institute
    Ricardo Mallarino Howard Hughes Medical Institute; Department of Organismic & Evolutionary Biology and Department of Molecular & Cellular Biology, Harvard University, 26 Oxford Street, Cambridge, MA Phone (617)-308-5895; email: [email protected] EDUCATION 2011-present Postdoctoral Fellow, Hopi Hoekstra Laboratory, Harvard University, Cambridge, MA 2005-2011 Ph.D., Biology, Arhat Abzhanov Laboratory, Harvard University, Cambridge, MA 1998-2003 B.S., Biology, Universidad de los Andes, Bogotá, Colombia RESEARCH INTERESTS Molecular basis of morphological change; developmental biology; ecology and evolutionary biology; genetics and genomics. RESEARCH EXPERIENCE 2011-present Department of Organismic & Evolutionary Biology and Department of Molecular & Cellular Biology, Hopi Hoekstra laboratory -Studied the molecular basis of local adaptation in Peromyscus mice using functional in vivo and in vitro approaches -Developed a new mammalian model species for studying the developmental basis of periodic pattern formation 2005-2011 Department of Organismic & Evolutionary Biology, Arhat Abzhanov laboratory -Identified a network of developmental genes responsible for generating beak diversity in Darwin’s finches -Studied beak patterning mechanisms in the relatives of Darwin’s finches 2005 Whitehead Institute, Susan Lindquist laboratory -Studied the role of molecular chaperones in controlling adaptive polyphenisms in insects 2003-2005 Smithsonian Tropical Research Institute, supervisors: Chris Jiggins and Biff Bermingham -Studied molecular systematics and phylogenetics of tropical butterflies 2001-2003 Smithsonian Tropical Research Institute, supervisor: Penelope Barnes -Studied coevolution of marine bivalves of the Family Lucinidae and their sulfur-oxidizing bacterial endosymbionts RESEARCH GRANTS AND AWARDS 2012 Putnam Expeditionary Grant; Harvard University 2009 Doctoral Dissertation Improvement Grant, National Science Foundation 2008 Summer Research Grant, Rockefeller Center for Latin American Studies, Harvard University 2005 Student Research Award, Dept.
    [Show full text]
  • Introduction to Macroevolution
    Spring, 2012 Phylogenetics 200A Modes of Macroevolution Macroevolution is used to refer to any evolutionary change at or above the level of species. Darwin illustrated the combined action of descent with modification, the principle of divergence, and extinction in the only figure in On the Origin of Species (Fig. 1), showing the link between microevolution and macroevolution. The New Synthesis sought to distance itself from the ‘origin of species’ (= macroevolution) and concentrated instead on microevolution - variation within populations and reproductive isolation. “Darwin’s principle of divergence derives from what he thought to be one of the most potent components of the struggle for existence. He argued that the strongest interactions would be among individuals within a population or among closely related populations or species, because these organisms have the most similar requirements. Darwin’s principle of divergence predicts that the individuals, populations or species most likely to succeed in the struggle are those that differ most from their close relatives in the way they achieve their needs for survival and reproduction.” (Reznick & Ricklefs 2009. Nature 457) Macroevolution also fell into disfavor with its invocation for hopeful monsters in development as well as its implication in some Neo-Lamarckian theories. Interest in macroevolution revived by several paleontologists including Steven Stanley, Stephen Jay Gould and Niles Eldredge, the latter two in the context of punctuated equilibrium. They proposed that what happens in evolution beyond the species level is due to processes that operate beyond the level of populations – including species selection. Niles Eldredge, in particular, has written extensively on the macroevolutionary hierarchy.
    [Show full text]
  • Microevolution and the Genetics of Populations ​ ​ Microevolution Refers to Varieties Within a Given Type
    Chapter 8: Evolution Lesson 8.3: Microevolution and the Genetics of Populations ​ ​ Microevolution refers to varieties within a given type. Change happens within a group, but the descendant is clearly of the same type as the ancestor. This might better be called variation, or adaptation, but the changes are "horizontal" in effect, not "vertical." Such changes might be accomplished by "natural selection," in which a trait ​ ​ ​ ​ within the present variety is selected as the best for a given set of conditions, or accomplished by "artificial selection," such as when dog breeders produce a new breed of dog. Lesson Objectives ● Distinguish what is microevolution and how it affects changes in populations. ● Define gene pool, and explain how to calculate allele frequencies. ● State the Hardy-Weinberg theorem ● Identify the five forces of evolution. Vocabulary ● adaptive radiation ● gene pool ● migration ● allele frequency ● genetic drift ● mutation ● artificial selection ● Hardy-Weinberg theorem ● natural selection ● directional selection ● macroevolution ● population genetics ● disruptive selection ● microevolution ● stabilizing selection ● gene flow Introduction Darwin knew that heritable variations are needed for evolution to occur. However, he knew nothing about Mendel’s laws of genetics. Mendel’s laws were rediscovered in the early 1900s. Only then could scientists fully understand the process of evolution. Microevolution is how individual traits within a population change over time. In order for a population to change, some things must be assumed to be true. In other words, there must be some sort of process happening that causes microevolution. The five ways alleles within a population change over time are natural selection, migration (gene flow), mating, mutations, or genetic drift.
    [Show full text]
  • Patterns and Power of Phenotypic Selection in Nature
    Articles Patterns and Power of Phenotypic Selection in Nature JOEL G. KINGSOLVER AND DAVID W. PFENNIG Phenotypic selection occurs when individuals with certain characteristics produce more surviving offspring than individuals with other characteristics. Although selection is regarded as the chief engine of evolutionary change, scientists have only recently begun to measure its action in the wild. These studies raise numerous questions: How strong is selection, and do different types of traits experience different patterns of selection? Is selection on traits that affect mating success as strong as selection on traits that affect survival? Does selection tend to favor larger body size, and, if so, what are its consequences? We explore these questions and discuss the pitfalls and future prospects of measuring selection in natural populations. Keywords: adaptive landscape, Cope’s rule, natural selection, rapid evolution, sexual selection henotypic selection occurs when individuals with selection on traits that affect survival stronger than on those Pdifferent characteristics (i.e., different phenotypes) that affect only mating success? In this article, we explore these differ in their survival, fecundity, or mating success. The idea and other questions about the patterns and power of phe- of phenotypic selection traces back to Darwin and Wallace notypic selection in nature. (1858), and selection is widely accepted as the primary cause of adaptive evolution within natural populations.Yet Darwin What is selection, and how does it work? never attempted to measure selection in nature, and in the Selection is the nonrandom differential survival or repro- century following the publication of On the Origin of Species duction of phenotypically different individuals.
    [Show full text]
  • After an Intense Competition, 27 Scientists Had the Right Stuff to Be Selected As HHMI Investigators. Where Will Their Curiosity
    ARDEM PATAPOUTIAN DYCHE MULLINS JOHANNES C. WALTER HOPI HOEKSTRA After an intense competition, 27 scientists had the right stuff to be selected as HHMI investigators. Where will their curiosity take them? Explorersby jennifer michalowski CHUAN HE DAVID REICH HHMI © AKIKO IWASAKI RACHEL I. WILSON PETER W. REDDIEN HHMI, Karl Deisseroth: Alison Yin / AP / Yin Alison Deisseroth: Karl HHMI, © RUSSELL E. VANCE AVIV REGEV TIRIN MOORE AP / Tesfaye Bizuayehu Cohen: Adam KARL DEISSEROTH CHRISTOPHER D. LIMA NICOLE KING ExplorersEVGENY NUDLER VAMSI K. MOOTHA MICHAEL A. DYER PETER BAUMANN HARMIT S. MALIK HHMI, Chuan He: Peter Barreras Peter He: Chuan HHMI, © ADAM E. COHEN MARC R. FREEMAN MICHAEL S. BRAINARD HHMI, Marc Freeman: Aynsley Floyd / AP / Floyd Aynsley Freeman: Marc HHMI, © YUKIKO YAMASHITA JEAN-LAURENT CASANOVA NEIL HUNTER Michael Dyer: Lance Murphey / AP / Murphey Lance Dyer: Michael illustration by gluekit MICHAEL RAPE 26 Fall 2013 / HHMI Bulletin “people think science is linear, but there are so many ways to approach a problem,” says biophysicist Adam Cohen. “Creativity is the key to everything.” That is to say, the road to discovery may depend less on technical expertise than on a researcher’s ability to choose the right questions, design an elegant experiment, follow unexpected leads, and turn failures into opportunities. HHMI scientists are known for these qualities, and in May, the Institute selected Cohen and 26 other highly creative scientists to join the ranks as new investigators. Chosen from among 1,155 applicants and based at 19 host institutions nationwide, the new investigators are exploring a broad swath of biology, asking how songbirds learn to sing, how cells sense mechanical forces, and what we can learn about human evolution from ancient DNA, among other questions.
    [Show full text]
  • Tempo and Mode in the Macroevolutionary Reconstruction of Darwinism STEPHEN JAY GOULD Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138
    Proc. Nadl. Acad. Sci. USA Vol. 91, pp. 6764-6771, July 1994 Colloquium Paper This paper was presented at a coloquium ented "Tempo and Mode in Evolution" organized by Walter M. Fitch and Francisco J. Ayala, held January 27-29, 1994, by the National Academy of Sciences, in Irvine, CA. Tempo and mode in the macroevolutionary reconstruction of Darwinism STEPHEN JAY GOULD Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138 ABSTRACT Among the several central nings of Dar- But conceptual complexity is not reducible to a formula or winism, his version ofLyellian uniformitranism-the extrap- epigram (as we taxonomists of life's diversity should know olationist commitment to viewing causes ofsmall-scale, observ- better than most). Too much ink has been wasted in vain able change in modern populations as the complete source, by attempts to define the essence ofDarwin's ideas, or Darwin- smooth extension through geological time, of all magnitudes ism itself. Mayr (1) has correctly emphasized that many and sequences in evolution-has most contributed to the causal different, if related, Darwinisms exist, both in the thought of hegemony of microevolutlon and the assumption that paleon- the eponym himself, and in the subsequent history of evo- tology can document the contingent history of life but cannot lutionary biology-ranging from natural selection, to genea- act as a domain of novel evolutionary theory. G. G. Simpson logical connection of all living beings, to gradualism of tried to combat this view of paleontology as theoretically inert change. in his classic work, Tempo and Mode in Evolution (1944), with It would therefore be fatuous to claim that any one legit- a brilliant argument that the two subjects of his tide fall into a imate "essence" can be more basic or important than an- unue paleontological domain and that modes (processes and other.
    [Show full text]
  • Dynamics of Excitatory-Inhibitory Neuronal Networks With
    I (X;Y) = S(X) - S(X|Y) in c ≈ p + N r V(t) = V 0 + ∫ dτZ 1(τ)I(t-τ) P(N) = 1 V= R I N! λ N e -λ www.cosyne.org R j = R = P( Ψ, υ) + Mγ (Ψ, υ) σ n D +∑ j n k D k n MAIN MEETING Salt Lake City, UT Feb 27 - Mar 2 ................................................................................................................................................................................................................. Program Summary Thursday, 27 February 4:00 pm Registration opens 5:30 pm Welcome reception 6:20 pm Opening remarks 6:30 pm Session 1: Keynote Invited speaker: Thomas Jessell 7:30 pm Poster Session I Friday, 28 February 7:30 am Breakfast 8:30 am Session 2: Circuits I: From wiring to function Invited speaker: Thomas Mrsic-Flogel; 3 accepted talks 10:30 am Session 3: Circuits II: Population recording Invited speaker: Elad Schneidman; 3 accepted talks 12:00 pm Lunch break 2:00 pm Session 4: Circuits III: Network models 5 accepted talks 3:45 pm Session 5: Navigation: From phenomenon to mechanism Invited speakers: Nachum Ulanovsky, Jeffrey Magee; 1 accepted talk 5:30 pm Dinner break 7:30 pm Poster Session II Saturday, 1 March 7:30 am Breakfast 8:30 am Session 6: Behavior I: Dissecting innate movement Invited speaker: Hopi Hoekstra; 3 accepted talks 10:30 am Session 7: Behavior II: Motor learning Invited speaker: Rui Costa; 2 accepted talks 11:45 am Lunch break 2:00 pm Session 8: Behavior III: Motor performance Invited speaker: John Krakauer; 2 accepted talks 3:45 pm Session 9: Reward: Learning and prediction Invited speaker: Yael
    [Show full text]
  • Darwin's Theory of Evolution Charles Darwin the Old World View
    9/11/14 Darwin’s Theory of Evolution Charles Darwin “Nothing in biology makes sense except in the light of evolution” • Synthesized these areas to establish -Theodosius Dobzhansky modern evolutionary biology. • Most important theory in biology. • Provides loose framework for this course. The History of Evolutionary The Old World View Thought • What led Darwin to conclude that • Plato & the Essence organisms evolve and are related by • Philosophical view descent? that all things have an essence, or type. • Old World View • Individuals are a • The enlightenment deviation from this • The lead-up to Darwin type. • Darwin 1 9/11/14 Ptolemy & geocentrism Aristotle & the Scala Naturae Coincided nicely with humans as the center of the universe • Life arranged in a scale from simple to complex with humans on top. • Developed the idea of a ‘final cause’ to explain everything. • Everything served a purpose to strive toward perfecon. The Renaissance & Revolutions The Judeo-Christian tradition • Increased wealth allowed for increased freedom to stray from the dictates of authority (especially in Italy). • Formalized/instuonalized all of this. • The world was geng smaller! – Discovery of the New World. • Final purpose was to glorify – People began to realize that the world was not exactly the way they were God. told that it was. • Humans (and the universe) – Again, a challenge to authority. were created perfectly, • Followed closely by the Reformaon. therefore any suggeson of – Again, a fundamental challenge to The Authority. evolu.on was heresy. – All of these caused certain people to begin thinking outside of dogma. • World was young (origins – Including challenges of dogma in observaons of the physical world.
    [Show full text]
  • The Scientific Controversy Over Whether Microevolution Can Account for Macroevolution
    SUMMARY: The Scientific Controversy Over Whether Microevolution Can Account For Macroevolution © Center for Science and Culture/Discovery Institute, 1511 Third Avenue, Suite 808, Seattle, WA 98101 When Charles Darwin published The Origin of Species in 1859, it was already known that existing species can change over time. This is the basis of artificial breeding, which had been practiced for thousands of years. Darwin and his contemporaries were also familiar enough with the fossil record to know that major changes in living things had occurred over geological time. Darwin's theory was that a process analogous to artificial breeding also occurs in nature; he called that process natural selection. Darwin's theory was also that changes in existing species due primarily to natural selection could, if given enough time, produce the major changes we see in the fossil record. After Darwin, the first phenomenon (changes within an existing species or gene pool) was named "microevolution." There is abundant evidence that changes can occur within existing species, both domestic and wild, so microevolution is uncontroversial. The second phenomenon (large-scale changes over geological time) was named "macroevolution," and Darwin's theory that the processes of the former can account for the latter was controversial right from the start. Many biologists during and after Darwin's lifetime have questioned whether the natural counterpart of domestic breeding could do what domestic breeding has never done -- namely, produce new species, organs, and body plans. In the first few decades of the twentieth century, skepticism over this aspect of evolution was so strong that Darwin's theory went into eclipse.
    [Show full text]
  • Darwin: a Summative Evaluation of the Visitor Experience
    Darwin: A Summative Evaluation of the Visitor Experience Prepared by Ellen Giusti March 2006 Darwin: A Summative Evaluation of the Visitor Experience Prepared by Ellen Giusti March 2006 SUMMARY................................................................................................................................................................. 3 INTRODUCTION ....................................................................................................................................................... 4 PURPOSE .................................................................................................................................................................... 5 METHOD..................................................................................................................................................................... 6 FINDINGS................................................................................................................................................................... 7 DARWIN RATINGS AND OTHER AMNH EXHIBITIONS ....................................................................................... 7 EXPECTATIONS .................................................................................................................................................. 8 TIME SPENT IN THE EXHIBITION......................................................................................................................... 9 HIGHLIGHTS ....................................................................................................................................................
    [Show full text]
  • Was Darwin Wrong? by David Quammen
    Was Darwin Wrong? By David Quammen National Geographic – November 2004 Evolution by natural selection, the central concept of the life's work of Charles Darwin, is a theory. It's a theory about the origin of adaptation, complexity, and diversity among Earth's living creatures. If you are skeptical by nature, unfamiliar with the terminology of science, and unaware of the overwhelming evidence, you might even be tempted to say that it's "just" a theory. In the same sense, relativity as described by Albert Einstein is "just" a theory. The notion that Earth orbits around the sun rather than vice versa, offered by Copernicus in 1543, is a theory. Continental drift is a theory. The existence, structure, and dynamics of atoms? Atomic theory. Even electricity is a theoretical construct, involving electrons, which are tiny units of charged mass that no one has ever seen. Each of these theories is an explanation that has been confirmed to such a degree, by observation and experiment, that knowledgeable experts accept it as fact. That's what scientists mean when they talk about a theory: not a dreamy and unreliable speculation, but an explanatory statement that fits the evidence. They embrace such an explanation confidently but provisionally—taking it as their best available view of reality, at least until some severely conflicting data or some better explanation might come along. The rest of us generally agree. We plug our televisions into little wall sockets, measure a year by the length of Earth's orbit, and in many other ways live our lives based on the trusted reality of those theories.
    [Show full text]
  • Peromyscus Mice As a Model for Studying Natural Variation
    FEATURE ARTICLE elifesciences.org THE NATURAL HISTORY OF MODEL ORGANISMS Peromyscus mice as a model for studying natural variation Abstract The deer mouse (genus Peromyscus) is the most abundant mammal in North America, and it occupies almost every type of terrestrial habitat. It is not surprising therefore that the natural history of Peromyscus is among the best studied of any small mammal. For decades, the deer mouse has contributed to our understanding of population genetics, disease ecology, longevity, endocrinology and behavior. Over a century’s worth of detailed descriptive studies of Peromyscus in the wild, coupled with emerging genetic and genomic techniques, have now positioned these mice as model organisms for the study of natural variation and adaptation. Recent work, combining field observations and laboratory experiments, has lead to exciting advances in a number of fields—from evolution and genetics, to physiology and neurobiology. DOI: 10.7554/eLife.06813.001 NICOLE L BEDFORD AND HOPI E HOEKSTRA* Introduction from Mus and Rattus, more is known concerning Peromyscus is a genus of small North American its biology in the laboratory than any other group rodents known colloquially as deer mice (Emmons, of small mammals (Figure 1; King, 1968; 1840). When the first Peromyscus specimens were Kirkland and Layne, 1989). Several disciplines shipped to European systematicists in the late 18th including ecology, evolution, physiology, repro- century, their resemblance to the local wood ductive biology and behavioral neuroscience mouse prompted the designation Mus sylvaticus have all employed Peromyscus, inspiring its label (Hooper, 1968). At the time, little was known of as ‘the Drosophila ofNorthAmericanmammalogy’ the diversity of rodents worldwide and most were (Dewey and Dawson, 2001).
    [Show full text]