Actual Checklist of Tardigrade Species
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Analysis of Tardigrade Damage Suppressor Protein (Dsup) Expressed in Tobacco
Analysis of Tardigrade Damage Suppressor Protein (Dsup) Expressed in Tobacco by Justin Kirke A Thesis Submitted to the Faculty of The Charles E. Schmidt College of Science In Partial Fulfillment of the Requirements for the Degree of Master of Science Florida Atlantic University Boca Raton, FL December 2019 Copyright 2019 by Justin Kirke ii Abstract Author: Justin Kirke Title: Analysis of Tardigrade Damage Suppressor Protein (Dsup) Expressed in Tobacco Institution: Florida Atlantic University Thesis Advisor: Dr. Xing-Hai Zhang Degree: Master of Science Year: 2019 DNA damage is one of the most harmful stress inducers in living organisms. Studies have shown that exposure to high doses of various types of radiation cause DNA sequence changes (mutation) and disturb protein synthesis, hormone balance, leaf gas exchange and enzyme activity. Recent discovery of a protein called Damage Suppressor Protein (Dsup), found in the tardigrade species Ramazzotius varieornatus, has shown to reduce the effects of radiation damage in human cell lines. We have generated multiple lines of tobacco plants expressing the Dsup gene and preformed numerous tests to show viability and response of these transgenic plants when exposed to mutagenic chemicals, UV radiation and ionizing radiation. We have also investigated Dsup function in association to DNA damage and repair in plants by analyzing the expression of related genes using RT-qPCR. We have also analyzed DNA damage from X-ray and UV treatments using an Alkaline Comet Assay. This project has the potential to help generate plants that are tolerant to more extreme stress environments, particularly DNA damage and iv mutation, unshielded by our atmosphere. -
An Introduction to Phylum Tardigrada - Review
Volume V, Issue V, May 2016 IJLTEMAS ISSN 2278 – 2540 An Introduction to phylum Tardigrada - Review Yashas R Devasurmutt1, Arpitha B M1* 1: R & D Centre, Department of Biotechnology, Dayananda Sagar College of Engineering, Bangalore, India 1*: Corresponding Author: Arpitha B M Abstract: Tardigrades popularly known as water bears are In cryptobiosis (extreme form of anabiosis), the metabolism is micrometazoans with four pairs of lobopod legs. They are the undetectable and the animal is known as tun in this phase. organisms which can live in extreme conditions and are known to Tuns have been known to survive very harsh environmental survive in vacuum and space without protection. Tardigardes conditions such as immersion in helium at -272° C (-458° F) survive in lichens and mosses, usually associated with water film or heating temperatures at 149° C (300° F), exposure to very on mosses, liverworts, and lichens. More species are found in high ionizing radiation and toxic chemical substances and milder environments such as meadows, ponds and lakes. They long durations without oxygen. [4] Figure 2 illustrates the are the first known species to survive in outer space. Tardigrades process of transition of the tardigrades[41]. are closely related to Arthropoda and nematodes based on their morphological and molecular analysis. The cryptobiosis of Figure 2: Transition process of Tardigrades Tardigrades have helped scientists to develop dry vaccines. They have been applied as research subjects in transplantology. Future research would help in more applications of tardigrades in the field of science. Keywords: Tardigrades, cryptobiosis, dry vaccines, Transplantology, space research I. INTRODUCTION ardigrade, a group of tiny arthropod-like animals having T four pairs of stubby legs with big claws, an oval stout body with a round back and lumbering gait. -
Diapause in Tardigrades: a Study of Factors Involved in Encystment
2296 The Journal of Experimental Biology 211, 2296-2302 Published by The Company of Biologists 2008 doi:10.1242/jeb.015131 Diapause in tardigrades: a study of factors involved in encystment Roberto Guidetti1,*, Deborah Boschini2, Tiziana Altiero2, Roberto Bertolani2 and Lorena Rebecchi2 1Department of the Museum of Paleobiology and Botanical Garden, Via Università 4, 41100, Modena, Italy and 2Department of Animal Biology, University of Modena and Reggio Emilia, Via Campi 213/D, 41100, Modena, Italy *Author for correspondence (e-mail: [email protected]) Accepted 12 May 2008 SUMMARY Stressful environmental conditions limit survival, growth and reproduction, or these conditions induce resting stages indicated as dormancy. Tardigrades represent one of the few animal phyla able to perform both forms of dormancy: quiescence and diapause. Different forms of cryptobiosis (quiescence) are widespread and well studied, while little attention has been devoted to the adaptive meaning of encystment (diapause). Our goal was to determine the environmental factors and token stimuli involved in the encystment process of tardigrades. The eutardigrade Amphibolus volubilis, a species able to produce two types of cyst (type 1 and type 2), was considered. Laboratory experiments and long-term studies on cyst dynamics of a natural population were conducted. Laboratory experiments demonstrated that active tardigrades collected in April produced mainly type 2 cysts, whereas animals collected in November produced mainly type 1 cysts, indicating that the different responses are functions of the physiological state at the time they were collected. The dynamics of the two types of cyst show opposite seasonal trends: type 2 cysts are present only during the warm season and type 1 cysts are present during the cold season. -
Introduction to the Body-Plan of Onychophora and Tardigrada
Joakim Eriksson, 02.12.13 Animal bodyplans Onychophora Tardigrada Bauplan, bodyplan • A Bauplan is a set of conservative characters that are typical for one group but distinctively different from a Bauplan of another group Arthropoda Bauplan 2 Bauplan 3 Bauplan 4 Tardigrada Onychophora Euarthropoda/Arthropoda Insects Chelicerates Myriapods Crustaceans Arthropoda/Panarthropoda Bauplan 1 Arthropod characters • Body segmented, with limbs on several segments • Adult body cavity a haemocoel that extends into the limbs • Cuticle of α-chitin which is molted regularly • Appendages with chitinous claws, and mixocoel with metanephridia and ostiate heart (absent in tardigrades) • Engrailed gene expressed in posterior ectoderm of each segment • Primitively possess a terminal mouth, a non-retractable proboscis, and a thick integument of diverse plates Phylogenomics and miRNAs suggest velvets worm are the sister group to the arthropods within a monophyletic Panarthropoda. Campbell L I et al. PNAS 2011;108:15920-15924 Fossil arthropods, the Cambrian explosion Aysheaia An onychophoran or phylum of its own? Anomalocaris A phylum on its own? Crown group and stem group Arthropoda Bauplan 2 Bauplan 3 Bauplan 4 Tardigrada Onychophora Euarthropoda/Arthropoda Arthropoda/Panarthropoda Bauplan 1 How do arthropods relate to other animal groups Articulata Georges Cuvier, 1817 Characters uniting articulata: •Segmentation •Ventral nerv cord •Teloblastic growth zone Ecdysozoa Aguinaldo et al 1997 Ecdysozoa Character uniting ecdysozoa: •Body covered by cuticle of α-chitin -
The Impact of Tourists on Antarctic Tardigrades: an Ordination-Based Model
J. Limnol., 2013; 72(s1): 128-135 DOI: 10.4081/jlimnol.2013.s1.e16 The impact of tourists on Antarctic tardigrades: an ordination-based model Sandra J. McINNES,1* Philip J.A. PUGH2 1British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, CB3 0ET, UK; 2Department of Life Sciences, Anglia Ruskin University, East Road, Cambridge, CB1 1PT, UK *Corresponding author: [email protected] ABSTRACT Tardigrades are important members of the Antarctic biota yet little is known about their role in the soil fauna or whether they are affected by anthropogenic factors. The German Federal Environment Agency commissioned research to assess the impact of human activities on soil meiofauna at 14 localities along the Antarctic peninsula during the 2009/2010 and 2010/2011 austral summers. We used ordination techniques to re-assess the block-sampling design used to compare areas of high and low human impact, to identify which of the sampled variables were biologically relevant and/or demonstrated an anthropogenic significance. We found the most sig- nificant differences between locations, reflecting local habitat and vegetation factor, rather than within-location anthropogenic impact. We noted no evidence of exotic imports but report on new maritime Antarctic sample sites and habitatsonly. Key words: Tardigrada, soil, alien introduction, maritime Antarctic. INTRODUCTION The German Federal Environment Agency commis- sioned a studyuse into the impact of ship-based tourism on The introduction of exotic taxa is regarded as a major Antarctic terrestrial soil ecosystems, focusing on a range threat to native species even in Antarctica (Chown et al., of taxa including Tardigrada. -
Tardigrade Reproduction and Food
Glime, J. M. 2017. Tardigrade Reproduction and Food. Chapt. 5-2. In: Glime, J. M. Bryophyte Ecology. Volume 2. Bryological 5-2-1 Interaction. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 18 July 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology2/>. CHAPTER 5-2 TARDIGRADE REPRODUCTION AND FOOD TABLE OF CONTENTS Life Cycle and Reproductive Strategies .............................................................................................................. 5-2-2 Reproductive Strategies and Habitat ............................................................................................................ 5-2-3 Eggs ............................................................................................................................................................. 5-2-3 Molting ......................................................................................................................................................... 5-2-7 Cyclomorphosis ........................................................................................................................................... 5-2-7 Bryophytes as Food Reservoirs ........................................................................................................................... 5-2-8 Role in Food Web ...................................................................................................................................... 5-2-12 Summary .......................................................................................................................................................... -
Tardigrades Colonise Antarctica?
This electronic thesis or dissertation has been downloaded from Explore Bristol Research, http://research-information.bristol.ac.uk Author: Short, Katherine A Title: Life in the extreme when did tardigrades colonise Antarctica? General rights Access to the thesis is subject to the Creative Commons Attribution - NonCommercial-No Derivatives 4.0 International Public License. A copy of this may be found at https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode This license sets out your rights and the restrictions that apply to your access to the thesis so it is important you read this before proceeding. Take down policy Some pages of this thesis may have been removed for copyright restrictions prior to having it been deposited in Explore Bristol Research. However, if you have discovered material within the thesis that you consider to be unlawful e.g. breaches of copyright (either yours or that of a third party) or any other law, including but not limited to those relating to patent, trademark, confidentiality, data protection, obscenity, defamation, libel, then please contact [email protected] and include the following information in your message: •Your contact details •Bibliographic details for the item, including a URL •An outline nature of the complaint Your claim will be investigated and, where appropriate, the item in question will be removed from public view as soon as possible. 1 Life in the Extreme: when did 2 Tardigrades Colonise Antarctica? 3 4 5 6 7 8 9 Katherine Short 10 11 12 13 14 15 A dissertation submitted to the University of Bristol in accordance with the 16 requirements for award of the degree of Geology in the Faculty of Earth 17 Sciences, September 2020. -
Ecdysis in a Stem-Group Euarthropod from the Early Cambrian of China Received: 2 November 2018 Jie Yang1,2, Javier Ortega-Hernández 3,4, Harriet B
www.nature.com/scientificreports OPEN Ecdysis in a stem-group euarthropod from the early Cambrian of China Received: 2 November 2018 Jie Yang1,2, Javier Ortega-Hernández 3,4, Harriet B. Drage5,6, Kun-sheng Du1,2 & Accepted: 20 March 2019 Xi-guang Zhang1,2 Published: xx xx xxxx Moulting is a fundamental component of the ecdysozoan life cycle, but the fossil record of this strategy is susceptible to preservation biases, making evidence of ecdysis in soft-bodied organisms extremely rare. Here, we report an exceptional specimen of the fuxianhuiid Alacaris mirabilis preserved in the act of moulting from the Cambrian (Stage 3) Xiaoshiba Lagerstätte, South China. The specimen displays a fattened and wrinkled head shield, inverted overlap of the trunk tergites over the head shield, and duplication of exoskeletal elements including the posterior body margins and telson. We interpret this fossil as a discarded exoskeleton overlying the carcass of an emerging individual. The moulting behaviour of A. mirabilis evokes that of decapods, in which the carapace is separated posteriorly and rotated forward from the body, forming a wide gape for the emerging individual. A. mirabilis illuminates the moult strategy of stem-group Euarthropoda, ofers the stratigraphically and phylogenetically earliest direct evidence of ecdysis within total-group Euarthropoda, and represents one of the oldest examples of this growth strategy in the evolution of Ecdysozoa. Te process of moulting consists of the periodical shedding (i.e. ecdysis) of the cuticular exoskeleton during growth that defnes members of Ecdysozoa1, a megadiverse animal group that includes worm-like organisms with radial mouthparts (Priapulida, Loricifera, Nematoida, Kinorhyncha), as well as more familiar forms with clawed paired appendages (Euarthropoda, Tardigrada, Onychophora). -
Educator's Guide
Educator’s Guide INSIDE • Map of the Exhibition • Essential Questions • Teaching in the Exhibition • Come Prepared Checklist • Correlation to Standards • Glossary ONLINE • Science & Literacy Activities • Additional Resources amnh.org/lal/educators ESSENTIAL QUESTIONS Use the Essential Questions below to connect the exhibition’s themes to your curriculum. Identify key points that you’d like your students to learn. Bolded text are science concepts that are addressed in this exhibition. Words in blue are defined in the Glossary. What do all living things need to do? • KEEP SAFE: Animals won’t get eaten if predators can’t Basic biological processes o!en include ge"ing oxygen, find them. Camouflage and finding food, moving around, taking in information, staying mimicry protect species safe, and above all, reproducing. that range from ants to The mimic octopus imitates octopodes, including the diferent animals—here, a flatfish moving along the ocean floor. What are some of the unexpected ways in harlequin jawfish, which which life survives and thrives? mimics the arm of the mimic octopus and eats its scraps; Living things have responded to the fundamental challenge and the treehopper, an insect that resembles an enormous of surviving and reproducing in extremely inventive ways: venomous ant. Because protective armor is such an effective defense, it has evolved again and again in countless plants • REPRODUCE: Every organism on Earth has a way to bring and animals, from the scales of a snake to the shell of a new life into the world and maximize its offspring’s conch. chance of survival. Some animals, like corals, • SENSE: release billions of tiny eggs and sperm at a In order to carry out all these life processes, time. -
Tardigrades: an Imaging Approach, a Record of Occurrence, and A
TARDIGRADES: AN IMAGING APPROACH, A RECORD OF OCCURRENCE, AND A BIODIVERSITY INVENTORY By STEVEN LOUIS SCHULZE A thesis submitted to the Graduate School-Camden Rutgers, The State University of New Jersey In partial fulfillment of the requirements For the degree of Master of Science Graduate Program in Biology Written under the direction of Dr. John Dighton And approved by ____________________________ Dr. John Dighton ____________________________ Dr. William Saidel ____________________________ Dr. Emma Perry ____________________________ Dr. Jennifer Oberle Camden, New Jersey May 2020 THESIS ABSTRACT Tardigrades: An Imaging Approach, A Record of Occurrence, and a Biodiversity Inventory by STEVEN LOUIS SCHULZE Thesis Director: Dr. John Dighton Three unrelated studies that address several aspects of the biology of tardigrades— morphology, records of occurrence, and local biodiversity—are herein described. Chapter 1 is a collaborative effort and meant to provide supplementary scanning electron micrographs for a forthcoming description of a genus of tardigrade. Three micrographs illustrate the structures that will be used to distinguish this genus from its confamilials. An In toto lateral view presents the external structures relative to one another. A second micrograph shows a dentate collar at the distal end of each of the fourth pair of legs, a posterior sensory organ (cirrus E), basal spurs at the base of two of four claws on each leg, and a ventral plate. The third micrograph illustrates an appendage on the second leg (p2) of the animal and a lateral appendage (C′) at the posterior sinistral margin of the first paired plate (II). This image also reveals patterning on the plate margin and the leg. -
Histology and Affinity of Anaspids, and the Early Evolution of the Vertebrate
Downloaded from http://rspb.royalsocietypublishing.org/ on March 9, 2016 Histology and affinity of anaspids, and rspb.royalsocietypublishing.org the early evolution of the vertebrate dermal skeleton Joseph N. Keating1,2 and Philip C. J. Donoghue1 Research 1School of Earth Sciences, University of Bristol, Life Sciences Building, Tyndall Avenue, Bristol BS8 1TQ, UK 2 Cite this article: Keating JN, Donoghue PCJ. Department of Earth Sciences, Natural History Museum, Cromwell Road, South Kensington, London SW7 5BD, UK 2016 Histology and affinity of anaspids, and the early evolution of the vertebrate dermal The assembly of the gnathostome bodyplan constitutes a formative episode in skeleton. Proc. R. Soc. B 283: 20152917. vertebrate evolutionary history, an interval in which the mineralized skeleton http://dx.doi.org/10.1098/rspb.2015.2917 and its canonical suite of cell and tissue types originated. Fossil jawless fishes, assigned to the gnathostome stem-lineage, provide an unparalleled insight into the origin and evolution of the skeleton, hindered only by uncertainty over the phylogenetic position and evolutionary significance of key clades. Received: 5 December 2015 Chief among these are the jawless anaspids, whose skeletal composition, a Accepted: 15 February 2016 rich source of phylogenetic information, is poorly characterized. Here we survey the histology of representatives spanning anaspid diversity and infer their generalized skeletal architecture. The anaspid dermal skeleton is com- posed of odontodes comprising spheritic dentine and enameloid, overlying a basal layer of acellular parallel fibre bone containing an extensive shallow Subject Areas: canal network. A recoded and revised phylogenetic analysis using equal palaeontology, developmental biology, and implied weights parsimony resolves anaspids as monophyletic, nested evolution among stem-gnathostomes. -
Hallucigenia's Onychophoran-Like Claws
LETTER doi:10.1038/nature13576 Hallucigenia’s onychophoran-like claws and the case for Tactopoda Martin R. Smith1 & Javier Ortega-Herna´ndez1 The Palaeozoic form-taxon Lobopodia encompasses a diverse range of Onychophorans lack armature sclerites, but possess two types of ap- soft-bodied‘leggedworms’ known from exceptionalfossil deposits1–9. pendicular sclerite: paired terminal claws in the walking legs, and den- Although lobopodians occupy a deep phylogenetic position within ticulate jaws within the mouth cavity9,23.AsinH. sparsa, claws in E. Panarthropoda, a shortage of derived characters obscures their evo- kanangrensis exhibit a broad base that narrows to a smooth conical point lutionary relationships with extant phyla (Onychophora, Tardigrada (Fig. 1e–h). Each terminal clawsubtends anangle of130u and comprises and Euarthropoda)2,3,5,10–15. Here we describe a complex feature in two to three constituent elements (Fig. 1e–h). Each smaller element pre- the terminal claws of the mid-Cambrian lobopodian Hallucigenia cisely fills the basal fossa of its container, from which it can be extracted sparsa—their construction from a stack of constituent elements— with careful manipulation (Fig. 1e, g, h and Extended Data Fig. 3a–g). and demonstrate that equivalent elements make up the jaws and claws Each constituent element has a similar morphology and surface orna- of extant Onychophora. A cladistic analysis, informed by develop- ment (Extended Data Fig. 3a–d), even in an abnormal claw where mental data on panarthropod head segmentation, indicates that the element tips are flat instead of pointed (Extended Data Fig. 3h). The stacked sclerite components in these two taxa are homologous— proximal bases of the innermost constituent elements are associated with resolving hallucigeniid lobopodians as stem-group onychophorans.