Diapause in Tardigrades: a Study of Factors Involved in Encystment
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Analysis of Tardigrade Damage Suppressor Protein (Dsup) Expressed in Tobacco
Analysis of Tardigrade Damage Suppressor Protein (Dsup) Expressed in Tobacco by Justin Kirke A Thesis Submitted to the Faculty of The Charles E. Schmidt College of Science In Partial Fulfillment of the Requirements for the Degree of Master of Science Florida Atlantic University Boca Raton, FL December 2019 Copyright 2019 by Justin Kirke ii Abstract Author: Justin Kirke Title: Analysis of Tardigrade Damage Suppressor Protein (Dsup) Expressed in Tobacco Institution: Florida Atlantic University Thesis Advisor: Dr. Xing-Hai Zhang Degree: Master of Science Year: 2019 DNA damage is one of the most harmful stress inducers in living organisms. Studies have shown that exposure to high doses of various types of radiation cause DNA sequence changes (mutation) and disturb protein synthesis, hormone balance, leaf gas exchange and enzyme activity. Recent discovery of a protein called Damage Suppressor Protein (Dsup), found in the tardigrade species Ramazzotius varieornatus, has shown to reduce the effects of radiation damage in human cell lines. We have generated multiple lines of tobacco plants expressing the Dsup gene and preformed numerous tests to show viability and response of these transgenic plants when exposed to mutagenic chemicals, UV radiation and ionizing radiation. We have also investigated Dsup function in association to DNA damage and repair in plants by analyzing the expression of related genes using RT-qPCR. We have also analyzed DNA damage from X-ray and UV treatments using an Alkaline Comet Assay. This project has the potential to help generate plants that are tolerant to more extreme stress environments, particularly DNA damage and iv mutation, unshielded by our atmosphere. -
Meiofauna of the Koster-Area, Results from a Workshop at the Sven Lovén Centre for Marine Sciences (Tjärnö, Sweden)
1 Meiofauna Marina, Vol. 17, pp. 1-34, 16 tabs., March 2009 © 2009 by Verlag Dr. Friedrich Pfeil, München, Germany – ISSN 1611-7557 Meiofauna of the Koster-area, results from a workshop at the Sven Lovén Centre for Marine Sciences (Tjärnö, Sweden) W. R. Willems 1, 2, *, M. Curini-Galletti3, T. J. Ferrero 4, D. Fontaneto 5, I. Heiner 6, R. Huys 4, V. N. Ivanenko7, R. M. Kristensen6, T. Kånneby 1, M. O. MacNaughton6, P. Martínez Arbizu 8, M. A. Todaro 9, W. Sterrer 10 and U. Jondelius 1 Abstract During a two-week workshop held at the Sven Lovén Centre for Marine Sciences on Tjärnö, an island on the Swedish west-coast, meiofauna was studied in a large variety of habitats using a wide range of sampling tech- niques. Almost 100 samples coming from littoral beaches, rock pools and different types of sublittoral sand- and mudflats yielded a total of 430 species, a conservative estimate. The main focus was on acoels, proseriate and rhabdocoel flatworms, rotifers, nematodes, gastrotrichs, copepods and some smaller taxa, like nemertodermatids, gnathostomulids, cycliophorans, dorvilleid polychaetes, priapulids, kinorhynchs, tardigrades and some other flatworms. As this is a preliminary report, some species still have to be positively identified and/or described, as 157 species were new for the Swedish fauna and 27 are possibly new to science. Each taxon is discussed separately and accompanied by a detailed species list. Keywords: biodiversity, species list, biogeography, faunistics 1 Department of Invertebrate Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05, Sweden; e-mail: [email protected], [email protected] 2 Research Group Biodiversity, Phylogeny and Population Studies, Centre for Environmental Sciences, Hasselt University, Campus Diepenbeek, Agoralaan, Building D, B-3590 Diepenbeek, Belgium; e-mail: [email protected] 3 Department of Zoology and Evolutionary Genetics, University of Sassari, Via F. -
BURSA İLİ LİMNOKARASAL TARDIGRADA FAUNASI Tufan ÇALIK
BURSA İLİ LİMNOKARASAL TARDIGRADA FAUNASI Tufan ÇALIK T.C. ULUDA Ğ ÜN İVERS İTES İ FEN B İLİMLER İ ENST İTÜSÜ BURSA İLİ LİMNOKARASAL TARDIGRADA FAUNASI Tufan ÇALIK Yrd. Doç. Dr. Rah şen S. KAYA (Danı şman) YÜKSEK L İSANS TEZ İ BİYOLOJ İ ANAB İLİM DALI BURSA-2017 ÖZET Yüksek Lisans Tezi BURSA İLİ LİMNOKARASAL TARDIGRADA FAUNASI Tufan ÇALIK Uluda ğ Üniversitesi Fen Bilimleri Enstitüsü Biyoloji Anabilim Dalı Danı şman: Yrd. Doç. Dr. Rah şen S. KAYA Bu çalı şmada, Bursa ili limnokarasal Tardigrada faunası ara ştırılmı ş, 6 familyaya ait 9 cins içerisinde yer alan 12 takson tespit edilmi ştir. Arazi çalı şmaları 09.06.2016 ile 22.02.2017 tarihleri arasında gerçekle ştirilmi ştir. Arazi çalı şmaları sonucunda 35 lokaliteden toplanan kara yosunu ve liken materyallerinden toplam 606 örnek elde edilmi ştir. Çalı şma sonucunda tespit edilen Cornechiniscus sp., Echiniscus testudo (Doyere, 1840), Echiniscus trisetosus Cuenot, 1932, Milnesium sp., Isohypsibius prosostomus prosostomus Thulin, 1928, Macrobiotus sp., Paramacrobiotus areolatus (Murray, 1907), Paramacrobiotus richtersi (Murray, 1911), Ramazzottius oberhaeuseri (Doyere, 1840) ve Richtersius coronifer (Richters, 1903) Bursa ilinden ilk kez kayıt edilmi ştir. Anahtar kelimeler: Tardigrada, Sistematik, Fauna, Bursa, Türkiye 2017, ix+ 85 sayfa i ABSTRACT MSc Thesis THE LIMNO-TERRESTRIAL TARDIGRADA FAUNA OF BURSA PROVINCE Tufan ÇALIK Uludag University Graduate School of Natural andAppliedSciences Department of Biology Supervisor: Asst. Prof. Dr. Rah şen S. KAYA In this study, the limno-terrestrial Tardigrada fauna of Bursa province was studied and 12 taxa in 9 genera which belongs to 6 families were identified. Field trips were conducted between 09.06.2016 and 22.02.2017. -
Eutardigrada: Parachela) from Antarctica That Reveals an Intraspecifc Variation in Tardigrade Egg Morphology Ji-Hoon Kihm1,2, Sanghee Kim 3, Sandra J
www.nature.com/scientificreports OPEN Integrative description of a new Dactylobiotus (Eutardigrada: Parachela) from Antarctica that reveals an intraspecifc variation in tardigrade egg morphology Ji-Hoon Kihm1,2, Sanghee Kim 3, Sandra J. McInnes 4, Krzysztof Zawierucha 5, Hyun Soo Rho6, Pilmo Kang1 & Tae-Yoon S. Park 1,2 ✉ Tardigrades constitute one of the most important group in the challenging Antarctic terrestrial ecosystem. Living in various habitats, tardigrades play major roles as consumers and decomposers in the trophic networks of Antarctic terrestrial and freshwater environments; yet we still know little about their biodiversity. The Eutardigrada is a species rich class, for which the eggshell morphology is one of the key morphological characters. Tardigrade egg morphology shows a diverse appearance, and it is known that, despite rare, intraspecifc variation is caused by seasonality, epigenetics, and external environmental conditions. Here we report Dactylobiotus ovimutans sp. nov. from King George Island, Antarctica. Interestingly, we observed a range of eggshell morphologies from the new species, although the population was cultured under controlled laboratory condition. Thus, seasonality, environmental conditions, and food source are eliminated, leaving an epigenetic factor as a main cause for variability in this case. Phylum Tardigrada is a microscopic metazoan group, characterized by having four pairs of legs usually termi- nated with claws, and is considered to be related to the arthropods and onychophorans1. Tey have attracted attention due to their cryptobiotic ability2–7, which helps them to occupy a variety of habitats throughout the world, including the harsh environments of Antarctica. Te challenging environments of Antarctica are rep- resented by a depauperate biodiversity, in which tardigrades have become one of the dominant invertebrate groups8–13. -
Introduction to the Body-Plan of Onychophora and Tardigrada
Joakim Eriksson, 02.12.13 Animal bodyplans Onychophora Tardigrada Bauplan, bodyplan • A Bauplan is a set of conservative characters that are typical for one group but distinctively different from a Bauplan of another group Arthropoda Bauplan 2 Bauplan 3 Bauplan 4 Tardigrada Onychophora Euarthropoda/Arthropoda Insects Chelicerates Myriapods Crustaceans Arthropoda/Panarthropoda Bauplan 1 Arthropod characters • Body segmented, with limbs on several segments • Adult body cavity a haemocoel that extends into the limbs • Cuticle of α-chitin which is molted regularly • Appendages with chitinous claws, and mixocoel with metanephridia and ostiate heart (absent in tardigrades) • Engrailed gene expressed in posterior ectoderm of each segment • Primitively possess a terminal mouth, a non-retractable proboscis, and a thick integument of diverse plates Phylogenomics and miRNAs suggest velvets worm are the sister group to the arthropods within a monophyletic Panarthropoda. Campbell L I et al. PNAS 2011;108:15920-15924 Fossil arthropods, the Cambrian explosion Aysheaia An onychophoran or phylum of its own? Anomalocaris A phylum on its own? Crown group and stem group Arthropoda Bauplan 2 Bauplan 3 Bauplan 4 Tardigrada Onychophora Euarthropoda/Arthropoda Arthropoda/Panarthropoda Bauplan 1 How do arthropods relate to other animal groups Articulata Georges Cuvier, 1817 Characters uniting articulata: •Segmentation •Ventral nerv cord •Teloblastic growth zone Ecdysozoa Aguinaldo et al 1997 Ecdysozoa Character uniting ecdysozoa: •Body covered by cuticle of α-chitin -
A New Addition to the Tardigrada of Iceland with an Updated Checklist of Icelandic Species (Eohypsibiidae, Eutardigrada)
University of Plymouth PEARL https://pearl.plymouth.ac.uk 01 University of Plymouth Research Outputs University of Plymouth Research Outputs 1996-11-01 Amphibolous weglarskae Dastych, a new addition to the Tardigrada of Iceland with an updated checklist of Icelandic species (Eohypsibiidae, Eutardigrada). Marley, NJ http://hdl.handle.net/10026.1/12098 Quekett Journal of Microscopy All content in PEARL is protected by copyright law. Author manuscripts are made available in accordance with publisher policies. Please cite only the published version using the details provided on the item record or document. In the absence of an open licence (e.g. Creative Commons), permissions for further reuse of content should be sought from the publisher or author. Quekett Journal of Microscopy, 1996, 37, 541-545 541 Amphibolus weglarskae (Dastych), a new addition to the Tardigrada of Iceland with an updated checklist of Icelandic species. (Eohypsibiidae, Eutardigrada) N. J. MARLEY & D. E. WRIGHT Department of Biological Sciences, University of Plymouth, Drake Circus, Plymouth, Devon, PL4 8AA, England. Summary slides in the Morgan collection held at the During the examination of the extensive Tardigrada National Museums of Scotland, Edinburgh. collections held at the Royal Museums of Scotland, Due to the very sparse number of records specimens and sculptured eggs belonging to Amphibolus available on the Tardigrada from Iceland it weglarskae (Dastych) were identified in the Morgan was considered a significant find. An updated Icelandic collection. This species had not previously taxonomic checklist to Iceland's tardigrada been reported from Iceland. A checklist of Icelandic species has been included because of the Tardigrada species is also provided. -
The Impact of Tourists on Antarctic Tardigrades: an Ordination-Based Model
J. Limnol., 2013; 72(s1): 128-135 DOI: 10.4081/jlimnol.2013.s1.e16 The impact of tourists on Antarctic tardigrades: an ordination-based model Sandra J. McINNES,1* Philip J.A. PUGH2 1British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, CB3 0ET, UK; 2Department of Life Sciences, Anglia Ruskin University, East Road, Cambridge, CB1 1PT, UK *Corresponding author: [email protected] ABSTRACT Tardigrades are important members of the Antarctic biota yet little is known about their role in the soil fauna or whether they are affected by anthropogenic factors. The German Federal Environment Agency commissioned research to assess the impact of human activities on soil meiofauna at 14 localities along the Antarctic peninsula during the 2009/2010 and 2010/2011 austral summers. We used ordination techniques to re-assess the block-sampling design used to compare areas of high and low human impact, to identify which of the sampled variables were biologically relevant and/or demonstrated an anthropogenic significance. We found the most sig- nificant differences between locations, reflecting local habitat and vegetation factor, rather than within-location anthropogenic impact. We noted no evidence of exotic imports but report on new maritime Antarctic sample sites and habitatsonly. Key words: Tardigrada, soil, alien introduction, maritime Antarctic. INTRODUCTION The German Federal Environment Agency commis- sioned a studyuse into the impact of ship-based tourism on The introduction of exotic taxa is regarded as a major Antarctic terrestrial soil ecosystems, focusing on a range threat to native species even in Antarctica (Chown et al., of taxa including Tardigrada. -
Tardigrade Reproduction and Food
Glime, J. M. 2017. Tardigrade Reproduction and Food. Chapt. 5-2. In: Glime, J. M. Bryophyte Ecology. Volume 2. Bryological 5-2-1 Interaction. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 18 July 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology2/>. CHAPTER 5-2 TARDIGRADE REPRODUCTION AND FOOD TABLE OF CONTENTS Life Cycle and Reproductive Strategies .............................................................................................................. 5-2-2 Reproductive Strategies and Habitat ............................................................................................................ 5-2-3 Eggs ............................................................................................................................................................. 5-2-3 Molting ......................................................................................................................................................... 5-2-7 Cyclomorphosis ........................................................................................................................................... 5-2-7 Bryophytes as Food Reservoirs ........................................................................................................................... 5-2-8 Role in Food Web ...................................................................................................................................... 5-2-12 Summary .......................................................................................................................................................... -
A Checklist of Norwegian Tardigrada
Fauna norvegica 2017 Vol. 37: 25-42. A checklist of Norwegian Tardigrada Terje Meier1 Meier T. 2017. A checklist of Norwegian Tardigrada. Fauna norvegica 37: 25-42. Animals of the phylum Tardigrada are microscopical metazoans that seldom exceed 1 mm in length. They are recorded from terrestrial, limnic and marine habitats and they have a distribution from Arctic to Antarctica. Tardigrades are also named ‘water bears’ referring to their ‘walk’ that resembles a bear’s gait. Knowledge of Norwegian tardigrades is fragmented and distributed across numerous sources. Here this information is gathered and validity of some records is discussed. In total 146 different species are recorded from the Norwegian mainland and Svalbard. Among these, 121 species and subspecies are recorded in previous publications and another 25 species are recorded from Norway for the first time. doi: 10.5324/fn.v37i0.2269. Received: 2017-05-22. Accepted: 2017-12-06. Published online: 2017-12.20. ISSN: 1891-5396 (electronic). Keywords: Tardigrada, Norway, Svalbard, checklist, taxonomy, literature, biodiversity, new records 1. Prinsdalsfaret 20, NO-1262 Oslo, Norway. Corresponding author: Terje Meier E-mail: [email protected] INTRODUCTION terminating in claws or sucking disks. The first three pairs of legs are directed ventrolaterally and are used to moving over the The phylum Tardigrada (water bears) currently holds about substrate. The hind legs are directed posteriorly and are used for 1250 valid species and subspecies (Degma et al. 2007, Degma grasping. Adult Tardigrades usually range from 250 µm to 700 et al. 2017) and are found in a great variety of habitats. They µm in length. -
Dwelling Eutardigrade Hypsibius Klebelsbergi MIHEL…I…, 1959 (Tardigrada)
Hamburg, Dezember 2007 Mitt. hamb. zool. Mus. Inst. Band 104 S. 61-72 ISSN 0072 9612 The osmoregulatory/excretory organs of the glacier- dwelling eutardigrade Hypsibius klebelsbergi MIHEL…I…, 1959 (Tardigrada) BEATE PELZER1, HIERONYMUS DASTYCH2 & HARTMUT GREVEN1 1 Institut für Zoomorphologie und Zellbiologie der Universität Düsseldorf, Universitätsstr. 1, 40225 Düsseldorf, Germany. E-mail: [email protected]. 2 Universität Hamburg, Biozentrum Grindel und Zoologisches Museum, Martin-Luther-King- Platz 3, 20146 Hamburg, Germany. E-mail: [email protected]. ABSTRACT. – The glacier-dwelling eutardigrade Hypsibius klebelsbergi MIHEL…I…, 1959 is exclusively known from cryoconite holes, i.e., water-filled micro-caverns on the glacier surface. This highly specialized environment is characterized by near zero temperatures and an extreme low conductivity of the water in these holes. Especially low conductivity might require powerful organs of osmoregulation in this unique species. Therefore we examined these organs in H. klebelsbergi using light and electron microscopy. H. klebelsbergi possesses three large Malpighian tubules at the transition of the midgut to the hindgut. Each tubule consists of a three- lobed distal, a thin middle and a short proximal part. The latter opens at the junction of the midgut and rectum. The distal part consists of three cells, which are characterized by a large nucleus, a fair number of mitochondria, a basal labyrinth, interdigitating plasma membranes and an irregular surface. Apical spaces extend in the middle part, which largely lacks nuclei and probably is made of offshoots of the proximal part. Here basal infolding and mitochondria are sparse. Interwoven cell projections and microvilli give this part and the proximal part a vacuolated appearance. -
Distribution and Diversity of Tardigrada Along Altitudinal Gradients in the Hornsund, Spitsbergen
RESEARCH/REVIEW ARTICLE Distribution and diversity of Tardigrada along altitudinal gradients in the Hornsund, Spitsbergen (Arctic) Krzysztof Zawierucha,1 Jerzy Smykla,2,3 Łukasz Michalczyk,4 Bartłomiej Gołdyn5,6 & Łukasz Kaczmarek1,6 1 Department of Animal Taxonomy and Ecology, Faculty of Biology, Adam Mickiewicz University in Poznan´ , Umultowska 89, PL-61-614 Poznan´ , Poland 2 Department of Biodiversity, Institute of Nature Conservation, Polish Academy of Sciences, Mickiewicza 33, PL-31-120 Krako´ w, Poland 3 Present address: Department of Biology and Marine Biology, University of North Carolina, Wilmington, 601 S. College Rd., Wilmington, NC 28403, USA 4 Department of Entomology, Institute of Zoology, Jagiellonian University, Gronostajowa 9, PL-30-387 Krako´ w, Poland 5 Department of General Zoology, Faculty of Biology, A. Mickiewicz University in Poznan´ , Umultowska 89, PL-61-614 Poznan´ , Poland 6 Laboratorio de Ecologı´a Natural y Aplicada de Invertebrados, Universidad Estatal Amazo´ nica, Puyo, Ecuador Keywords Abstract Arctic; biodiversity; climate change; invertebrate ecology; Milnesium; Two transects were established and sampled along altitudinal gradients on the Tardigrada. slopes of Ariekammen (77801?N; 15831?E) and Rotjesfjellet (77800?N; 15822?E) in Hornsund, Spitsbergen. In total 59 moss, lichen, liverwort and mixed mossÁ Correspondence lichen samples were collected and 33 tardigrade species of Hetero- and Krzysztof Zawierucha, Department of Eutardigrada were found. The a diversity ranged from 1 to 8 per sample; the Animal Taxonomy and Ecology, Faculty of estimated number of species based on all analysed samples was 52917 for the Biology, Adam Mickiewicz University in Chao 2 estimator and 41 for the incidence-based coverage estimator. -
Phylum Tardigrada Doyère, 1840. In: Zhang, Z.-Q
Phylum Tardigrada Doyère, 1840 (3 classes)1 Class Heterotardigrada Marcus, 1927 (2 orders) Order Arthrotardigrada Marcus, 1927 (8 families) Family Archechiniscidae Binda, 1978 (1 genus, 3 species) Family Batillipedidae Ramazzotti, 1962 (1 genus, 26 species) Family Coronarctidae Renaud-Mornant, 1974 (2 genera, 8 species) Family Halechiniscidae Thulin, 1928 (7 subfamilies, 28 genera, 88 species) Family Neoarctidae de Zio Grimaldi, D'Addabbo Gallo & Morone De Lucia, 1992 (1 genus, 1 species) Family Neostygarctidae de Zio Grimaldi, D’Addabbo Gallo & De Lucia Morone, 1987 (1 genus, 1 species) Family Renaudarctidae Kristensen & Higgins, 1984 (1 genus, 1 species) Family Stygarctidae Schulz, 1951 (2 subfamilies, 4 genera, 21 species) Order Echiniscoidea Richters, 1926 (4 families) Family Echiniscoididae Kristensen & Hallas, 1980 (2 genera, 11 species) Family Carphaniidae Binda & Kristensen, 1986 (1 genus, 1 species) Family Oreellidae Ramazzotti, 1962 (1 genus, 2 species) Family Echiniscidae Thulin, 1928 (12 genera, 281 species) Class Mesotardigrada Rahm, 1937 (1 order)2 Order Thermozodia Ramazzotti & Maucci, 1983 (1 family) Family Thermozodiidae Rahm, 1937 (1 genus, 1 species) Class Eutardigrada Richters 1926 (2 orders) Order Apochela Schuster, Nelson, Grigarick & Christenberry, 1980 (1 family) Family Milnesiidae Ramazzotti, 1962 (3 genera, 19+1† species)3 Order Parachela Schuster, Nelson Grigarick & Christenberry, 1980 (4 superfamilies, 9 families) Family Necopinatidae Ramazzotti & Maucci, 1983 (1 genus, 1 species)4 incertae sedis (1 genus: Apodibius,