The Early History of the Metazoa—A Paleontologist's Viewpoint
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The Ediacaran Frondose Fossil Arborea from the Shibantan Limestone of South China
Journal of Paleontology, 94(6), 2020, p. 1034–1050 Copyright © 2020, The Paleontological Society. This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/ licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited. 0022-3360/20/1937-2337 doi: 10.1017/jpa.2020.43 The Ediacaran frondose fossil Arborea from the Shibantan limestone of South China Xiaopeng Wang,1,3 Ke Pang,1,4* Zhe Chen,1,4* Bin Wan,1,4 Shuhai Xiao,2 Chuanming Zhou,1,4 and Xunlai Yuan1,4,5 1State Key Laboratory of Palaeobiology and Stratigraphy, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Palaeoenvironment, Chinese Academy of Sciences, Nanjing 210008, China <[email protected]><[email protected]> <[email protected]><[email protected]><[email protected]><[email protected]> 2Department of Geosciences, Virginia Tech, Blacksburg, Virginia 24061, USA <[email protected]> 3University of Science and Technology of China, Hefei 230026, China 4University of Chinese Academy of Sciences, Beijing 100049, China 5Center for Research and Education on Biological Evolution and Environment, Nanjing University, Nanjing 210023, China Abstract.—Bituminous limestone of the Ediacaran Shibantan Member of the Dengying Formation (551–539 Ma) in the Yangtze Gorges area contains a rare carbonate-hosted Ediacara-type macrofossil assemblage. This assemblage is domi- nated by the tubular fossil Wutubus Chen et al., 2014 and discoidal fossils, e.g., Hiemalora Fedonkin, 1982 and Aspidella Billings, 1872, but frondose organisms such as Charnia Ford, 1958, Rangea Gürich, 1929, and Arborea Glaessner and Wade, 1966 are also present. -
Multigene Eukaryote Phylogeny Reveals the Likely Protozoan Ancestors of Opis- Thokonts (Animals, Fungi, Choanozoans) and Amoebozoa
Accepted Manuscript Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opis- thokonts (animals, fungi, choanozoans) and Amoebozoa Thomas Cavalier-Smith, Ema E. Chao, Elizabeth A. Snell, Cédric Berney, Anna Maria Fiore-Donno, Rhodri Lewis PII: S1055-7903(14)00279-6 DOI: http://dx.doi.org/10.1016/j.ympev.2014.08.012 Reference: YMPEV 4996 To appear in: Molecular Phylogenetics and Evolution Received Date: 24 January 2014 Revised Date: 2 August 2014 Accepted Date: 11 August 2014 Please cite this article as: Cavalier-Smith, T., Chao, E.E., Snell, E.A., Berney, C., Fiore-Donno, A.M., Lewis, R., Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opisthokonts (animals, fungi, choanozoans) and Amoebozoa, Molecular Phylogenetics and Evolution (2014), doi: http://dx.doi.org/10.1016/ j.ympev.2014.08.012 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. 1 1 Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opisthokonts 2 (animals, fungi, choanozoans) and Amoebozoa 3 4 Thomas Cavalier-Smith1, Ema E. Chao1, Elizabeth A. Snell1, Cédric Berney1,2, Anna Maria 5 Fiore-Donno1,3, and Rhodri Lewis1 6 7 1Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK. -
An Exceptionally Preserved Arthropod Cardiovascular System from the Early Cambrian
ARTICLE Received 20 Dec 2013 | Accepted 4 Mar 2014 | Published 7 Apr 2014 DOI: 10.1038/ncomms4560 An exceptionally preserved arthropod cardiovascular system from the early Cambrian Xiaoya Ma1,2, Peiyun Cong1, Xianguang Hou1, Gregory D. Edgecombe2 & Nicholas J. Strausfeld3 The assumption that amongst internal organs of early arthropods only the digestive system withstands fossilization is challenged by the identification of brain and ganglia in early Cambrian fuxianhuiids and megacheirans from southwest China. Here we document in the 520-million-year-old Chengjiang arthropod Fuxianhuia protensa an exceptionally preserved bilaterally symmetrical organ system corresponding to the vascular system of extant arthropods. Preserved primarily as carbon, this system includes a broad dorsal vessel extending through the thorax to the brain where anastomosing branches overlap brain seg- ments and supply the eyes and antennae. The dorsal vessel provides segmentally paired branches to lateral vessels, an arthropod ground pattern character, and extends into the anterior part of the abdomen. The addition of its vascular system to documented digestive and nervous systems resolves the internal organization of F. protensa as the most completely understood of any Cambrian arthropod, emphasizing complexity that had evolved by the early Cambrian. 1 Yunnan Key Laboratory for Palaeobiology, Yunnan University, Kunming 650091, China. 2 Department of Earth Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, UK. 3 Department of Neuroscience and Center for Insect Science, University of Arizona, Tucson, Arizona 85721, USA. Correspondence and requests for materials should be addressed to X.H. (email: [email protected]) or to N.J.S. (email: fl[email protected]). -
Lessons from the Fossil Record: the Ediacaran Radiation, the Cambrian Radiation, and the End-Permian Mass Extinction
OUP CORRECTED PROOF – FINAL, 06/21/12, SPi CHAPTER 5 Lessons from the fossil record: the Ediacaran radiation, the Cambrian radiation, and the end-Permian mass extinction S tephen Q . D ornbos, M atthew E . C lapham, M argaret L . F raiser, and M arc L afl amme 5.1 Introduction and altering substrate consistency ( Thayer 1979 ; Seilacher and Pfl üger 1994 ). In addition, burrowing Ecologists studying modern communities and eco- organisms play a crucial role in modifying decom- systems are well aware of the relationship between position and enhancing nutrient cycling ( Solan et al. biodiversity and aspects of ecosystem functioning 2008 ). such as productivity (e.g. Tilman 1982 ; Rosenzweig Increased species richness often enhances ecosys- and Abramsky 1993 ; Mittelbach et al. 2001 ; Chase tem functioning, but a simple increase in diversity and Leibold 2002 ; Worm et al. 2002 ), but the pre- may not be the actual underlying driving mecha- dominant directionality of that relationship, nism; instead an increase in functional diversity, the whether biodiversity is a consequence of productiv- number of ecological roles present in a community, ity or vice versa, is a matter of debate ( Aarssen 1997 ; may be the proximal cause of enhanced functioning Tilman et al. 1997 ; Worm and Duffy 2003 ; van ( Tilman et al. 1997 ; Naeem 2002 ; Petchey and Gaston, Ruijven and Berendse 2005 ). Increased species rich- 2002 ). The relationship between species richness ness could result in increased productivity through (diversity) and functional diversity has important 1) interspecies facilitation and complementary implications for ecosystem functioning during resource use, 2) sampling effects such as a greater times of diversity loss, such as mass extinctions, chance of including a highly productive species in a because species with overlapping ecological roles diverse assemblage, or 3) a combination of biologi- can provide functional redundancy to maintain cal and stochastic factors ( Tilman et al. -
Protist Phylogeny and the High-Level Classification of Protozoa
Europ. J. Protistol. 39, 338–348 (2003) © Urban & Fischer Verlag http://www.urbanfischer.de/journals/ejp Protist phylogeny and the high-level classification of Protozoa Thomas Cavalier-Smith Department of Zoology, University of Oxford, South Parks Road, Oxford, OX1 3PS, UK; E-mail: [email protected] Received 1 September 2003; 29 September 2003. Accepted: 29 September 2003 Protist large-scale phylogeny is briefly reviewed and a revised higher classification of the kingdom Pro- tozoa into 11 phyla presented. Complementary gene fusions reveal a fundamental bifurcation among eu- karyotes between two major clades: the ancestrally uniciliate (often unicentriolar) unikonts and the an- cestrally biciliate bikonts, which undergo ciliary transformation by converting a younger anterior cilium into a dissimilar older posterior cilium. Unikonts comprise the ancestrally unikont protozoan phylum Amoebozoa and the opisthokonts (kingdom Animalia, phylum Choanozoa, their sisters or ancestors; and kingdom Fungi). They share a derived triple-gene fusion, absent from bikonts. Bikonts contrastingly share a derived gene fusion between dihydrofolate reductase and thymidylate synthase and include plants and all other protists, comprising the protozoan infrakingdoms Rhizaria [phyla Cercozoa and Re- taria (Radiozoa, Foraminifera)] and Excavata (phyla Loukozoa, Metamonada, Euglenozoa, Percolozoa), plus the kingdom Plantae [Viridaeplantae, Rhodophyta (sisters); Glaucophyta], the chromalveolate clade, and the protozoan phylum Apusozoa (Thecomonadea, Diphylleida). Chromalveolates comprise kingdom Chromista (Cryptista, Heterokonta, Haptophyta) and the protozoan infrakingdom Alveolata [phyla Cilio- phora and Miozoa (= Protalveolata, Dinozoa, Apicomplexa)], which diverged from a common ancestor that enslaved a red alga and evolved novel plastid protein-targeting machinery via the host rough ER and the enslaved algal plasma membrane (periplastid membrane). -
A NEW METAZOAN from the MIDDLE CAMBRIAN of UTAH and the NATURE of the VETULICOLIA by DEREK E
[Palaeontology, Vol. 48, Part 4, 2005, pp. 681–686] RAPID COMMUNICATION A NEW METAZOAN FROM THE MIDDLE CAMBRIAN OF UTAH AND THE NATURE OF THE VETULICOLIA by DEREK E. G. BRIGGS*, BRUCES.LIEBERMAN , SUSAN L. HALGEDAHLà and RICHARD D. JARRARDà *Department of Geology and Geophysics, Yale University, PO Box 208109, New Haven, CT 06520-8109, USA; e-mail: [email protected] Department of Geology, University of Kansas, 1475 Jayhawk Boulevard, 120 Lindley Hall, Lawrence, KS 66045, USA àDepartment of Geology and Geophysics, University of Utah, 135 S. 1460 East, Salt Lake City, UT 84112, USA Typescript received 22 November 2004; accepted in revised form 24 March 2005 Abstract: A new metazoan, Skeemella clavula gen. et sp. arthropodan in character. The similarity of this fossil nov., is described from the Middle Cambrian Pierson Cove to vetulicolians throws hypotheses of their deuterostome Formation of the Drum Mountains, Utah, USA. Skeemella affinity into question and highlights their problematic sta- is similar to vetulicolians, but differs from other examples tus. of this group in the relative proportions of the anterior and posterior sections, the large number of divisions, and Key words: vetulicolian, Cambrian, deuterostome, arthro- the elongate bifid termination. The posterior section is pod. The very name vetulicolian conjures up creatures from species Banffia confusa, to erect a new class of stem-group another planet. These extraordinary fossils, with a head arthropods, the Vetulicolida. They argued that Banffia shield-like anterior and narrow segmented trunk-like pos- constricta from the Burgess Shale belongs to the same terior, are the latest Cambrian group to be accorded phy- class, extending its range to North America. -
Probabilistic Methods Surpass Parsimony When Assessing Clade Support in Phylogenetic Analyses of Discrete Morphological Data
O'Reilly, J., Puttick, M., Pisani, D., & Donoghue, P. (2017). Probabilistic methods surpass parsimony when assessing clade support in phylogenetic analyses of discrete morphological data. Palaeontology. https://doi.org/10.1111/pala.12330 Publisher's PDF, also known as Version of record License (if available): CC BY Link to published version (if available): 10.1111/pala.12330 Link to publication record in Explore Bristol Research PDF-document This is the final published version of the article (version of record). It first appeared online via Wiley at http://onlinelibrary.wiley.com/doi/10.1111/pala.12330/abstract. Please refer to any applicable terms of use of the publisher. University of Bristol - Explore Bristol Research General rights This document is made available in accordance with publisher policies. Please cite only the published version using the reference above. Full terms of use are available: http://www.bristol.ac.uk/red/research-policy/pure/user-guides/ebr-terms/ [Palaeontology, 2017, pp. 1–14] PROBABILISTIC METHODS SURPASS PARSIMONY WHEN ASSESSING CLADE SUPPORT IN PHYLOGENETIC ANALYSES OF DISCRETE MORPHOLOGICAL DATA by JOSEPH E. O’REILLY1 ,MARKN.PUTTICK1,2 , DAVIDE PISANI1,3 and PHILIP C. J. DONOGHUE1 1School of Earth Sciences, University of Bristol, Life Sciences Building, Tyndall Avenue, Bristol, BS8 1TQ, UK; [email protected]; [email protected]; [email protected]; [email protected] 2Department of Earth Sciences, The Natural History Museum, Cromwell Road, London, SW7 5BD, UK 3School of Biological Sciences, University of Bristol, Life Sciences Building, Tyndall Avenue, Bristol, BS8 1TQ, UK Typescript received 28 April 2017; accepted in revised form 13 September 2017 Abstract: Fossil taxa are critical to inferences of historical 50% support. -
First Record of the Colonial Ascidian Didemnum Vexillum Kott, 2002 in the Mediterranean: Lagoon of Venice (Italy)
BioInvasions Records (2012) Volume 1, Issue 4: 247–254 Open Access doi: http://dx.doi.org/10.3391/bir.2012.1.4.02 © 2012 The Author(s). Journal compilation © 2012 REABIC Research Article First record of the colonial ascidian Didemnum vexillum Kott, 2002 in the Mediterranean: Lagoon of Venice (Italy) Davide Tagliapietra1*, Erica Keppel1, Marco Sigovini1 and Gretchen Lambert2 1 CNR - National Research Council of Italy, ISMAR - Marine Sciences Institute, Arsenale - Tesa 104, Castello 2737/F, I-30122 Venice, Italy 2 University of Washington Friday Harbor Laboratories, Friday Harbor, WA 98250. Mailing address: 12001 11th Ave. NW, Seattle, WA 98177, USA E-mail: [email protected] (DT), [email protected] (EK), [email protected] (MS), [email protected] (GL) *Corresponding author Received: 30 July 2012 / Accepted: 16 October 2012 / Published online: 23 October 2012 Abstract Numerous colonies of the invasive colonial ascidian Didemnum vexillum Kott, 2002 have been found in the Lagoon of Venice (Italy) in 2012, overgrowing fouling organisms on maritime structures such as docks, pilings, and pontoons. This is the first record for the Mediterranean Sea. A survey conducted in July 2012 revealed that D. vexillum is present in the euhaline and tidally well flushed zones of the lagoon, whereas it was absent at the examined estuarine tracts and at the zones surrounding the saltmarshes. Suitable climatic, physiographic and saline features together with a high volume of international maritime traffic make the Lagoon of Venice a perfect hub for the successful introduction of temperate non-native species. Key words: Didemnum vexillum, Mediterranean, Lagoon of Venice, ascidian, fouling, marinas, invasive species Introduction cold coasts of North America and Europe as well as from Japan where it is probably native Didemnum vexillum Kott, 2002 (Ascidiacea: (Bullard et al. -
What Came Before the Cambrian Explosion
What Came Before the Cambrian? Advanced Reading The Cambrian Explosion was an era of significant evolution of animal life. What came before the Cambrian era that, in a sense, opened the door for the new body forms to evolve? The geologic era before the Cambrian was called the Ediacran, lasting from about 635 to 542 million years ago. Scientists often characterize this era as an “experimental” phase in the evolution of animals. By this time unicellular life had been around for millions of years and a mat of microbes covered parts of the seafloor. The first multicellular animals that evolved could have grazed on those microbes. The fossils from the Ediacran mostly show soft-bodied organisms. Some of these fossils look like fronds, discs and blobs, and aren’t easy to identify. Others seem to be related to Cnidarians or to be soft-bodied relatives of arthropods or perhaps Echinoderms. In addition, there are trace fossils, probably made by worm-like creatures. Many of the fossil animals remain mysterious and may represent lines of animals that no longer exist. But fossils are not the only evidence of animal life in the Ediacran. In fact the first evidence of sponges is not a body fossil but rather a biochemical fossil. When an animal dies, some of its molecules break down into a stable form that can last in rocks for millions of years just like body fossils. These are biochemical fossils. Scientists have found an Ediacran biochemical fossil of a fat molecule found today only in sponges. The name Ediacran comes from the Ediacra Hills of South Australia, the most famous location of these fossils. -
Hemichordate Phylogeny: a Molecular, and Genomic Approach By
Hemichordate Phylogeny: A molecular, and genomic approach by Johanna Taylor Cannon A dissertation submitted to the Graduate Faculty of Auburn University in partial fulfillment of the requirements for the Degree of Doctor of Philosophy Auburn, Alabama May 4, 2014 Keywords: phylogeny, evolution, Hemichordata, bioinformatics, invertebrates Copyright 2014 by Johanna Taylor Cannon Approved by Kenneth M. Halanych, Chair, Professor of Biological Sciences Jason Bond, Associate Professor of Biological Sciences Leslie Goertzen, Associate Professor of Biological Sciences Scott Santos, Associate Professor of Biological Sciences Abstract The phylogenetic relationships within Hemichordata are significant for understanding the evolution of the deuterostomes. Hemichordates possess several important morphological structures in common with chordates, and they have been fixtures in hypotheses on chordate origins for over 100 years. However, current evidence points to a sister relationship between echinoderms and hemichordates, indicating that these chordate-like features were likely present in the last common ancestor of these groups. Therefore, Hemichordata should be highly informative for studying deuterostome character evolution. Despite their importance for understanding the evolution of chordate-like morphological and developmental features, relationships within hemichordates have been poorly studied. At present, Hemichordata is divided into two classes, the solitary, free-living enteropneust worms, and the colonial, tube- dwelling Pterobranchia. The objective of this dissertation is to elucidate the evolutionary relationships of Hemichordata using multiple datasets. Chapter 1 provides an introduction to Hemichordata and outlines the objectives for the dissertation research. Chapter 2 presents a molecular phylogeny of hemichordates based on nuclear ribosomal 18S rDNA and two mitochondrial genes. In this chapter, we suggest that deep-sea family Saxipendiidae is nested within Harrimaniidae, and Torquaratoridae is affiliated with Ptychoderidae. -
Filogranula Cincta (Goldfuss, 1831), a Serpulid Worm (Polychaeta, Sedentaria, Serpulidae) from the Bohemian Cretaceous Basin
SBORNÍK NÁRODNÍHO MUZEA V PRAZE ACTA MUSEI NATIONALIS PRAGAE Řada B – Přírodní vědy • sv. 71 • 2015 • čís. 3–4 • s. 293–300 Series B – Historia Naturalis • vol. 71 • 2015 • no. 3–4 • pp. 293–300 FILOGRANULA CINCTA (GOLDFUSS, 1831), A SERPULID WORM (POLYCHAETA, SEDENTARIA, SERPULIDAE) FROM THE BOHEMIAN CRETACEOUS BASIN TOMÁŠ KOČÍ Department of Palaeontology, Natural History Museum, National Museum, Václavské náměstí 68, 115 79 Praha 1, the Czech Republic; Ivančická 581, Praha 9 – Letňany 199 00, the Czech Republic; e-mail: [email protected] MANFRED JÄGER Lindenstrasse 53, D-72348 Rosenfeld, Germany; e-mail: [email protected] Kočí, T., Jäger, M. (2015): Filogranula cincta (GOLDFUSS, 1831), a serpulid worm (Polychaeta, Sedentaria, Serpulidae) from the Bohemian Cretaceous Basin. – Acta Mus. Nat. Pragae, Ser. B Hist. Nat., 71(3-4): 293–300, Praha. ISSN 1804-6479. Abstract. Tubes of the serpulid worm Filogranula cincta (GOLDFUSS, 1831) were found in several rocky coast facies and other nearshore / shallow water localities in the Bohemian Cretaceous Basin ranging in geological age from the Late Cenomanian to the Late Turonian. A mor - phological description, discussion regarding systematics and taxonomy and notes on palaeoecology and stratigraphy are presented. ■ Late Cretaceous, Polychaeta, Filogranula, Serpulidae, Palaeoecology Received April 24, 2015 Issued December, 2015 Introduction any Filogranula cincta specimen. It seems that, apart from the vague mention from Strehlen by Wegner (1913), for more Filogranula cincta (GOLDFUSS, 1831) is a small and than a hundred years no additional finds of Filogranula inconspicuous but nevertheless common serpulid species in cincta from the BCB had been published until the present the Bohemian Cretaceous Basin (BCB). -
Retallack 2014 Newfoundland Ediacaran
Downloaded from gsabulletin.gsapubs.org on May 2, 2014 Geological Society of America Bulletin Volcanosedimentary paleoenvironments of Ediacaran fossils in Newfoundland Gregory J. Retallack Geological Society of America Bulletin 2014;126, no. 5-6;619-638 doi: 10.1130/B30892.1 Email alerting services click www.gsapubs.org/cgi/alerts to receive free e-mail alerts when new articles cite this article Subscribe click www.gsapubs.org/subscriptions/ to subscribe to Geological Society of America Bulletin Permission request click http://www.geosociety.org/pubs/copyrt.htm#gsa to contact GSA Copyright not claimed on content prepared wholly by U.S. government employees within scope of their employment. Individual scientists are hereby granted permission, without fees or further requests to GSA, to use a single figure, a single table, and/or a brief paragraph of text in subsequent works and to make unlimited copies of items in GSA's journals for noncommercial use in classrooms to further education and science. This file may not be posted to any Web site, but authors may post the abstracts only of their articles on their own or their organization's Web site providing the posting includes a reference to the article's full citation. GSA provides this and other forums for the presentation of diverse opinions and positions by scientists worldwide, regardless of their race, citizenship, gender, religion, or political viewpoint. Opinions presented in this publication do not reflect official positions of the Society. Notes © 2014 Geological Society of America Downloaded from gsabulletin.gsapubs.org on May 2, 2014 Volcanosedimentary paleoenvironments of Ediacaran fossils in Newfoundland Gregory J.