Halogenated Compounds from Marine Fungi
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(Gladiolus Grandiflorus Hort.) Corm Rot in Mexico Revista Mexicana De Fitopatología, Vol
Revista Mexicana de Fitopatología ISSN: 0185-3309 [email protected] Sociedad Mexicana de Fitopatología, A.C. México González-Pérez, Enrique; Yáñez-Morales, María de Jesús; Ortega-Escobar, Héctor Manuel; Velázquez-Mendoza, Juan Comparative Analysis among Pathogenic Fungal Species that Cause Gladiolus (Gladiolus grandiflorus Hort.) Corm Rot in Mexico Revista Mexicana de Fitopatología, vol. 27, núm. 1, enero-junio, 2009, pp. 45-52 Sociedad Mexicana de Fitopatología, A.C. Texcoco, México Available in: http://www.redalyc.org/articulo.oa?id=61211414006 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Revista Mexicana de FITOPATOLOGIA/ 45 Comparative Analysis among Pathogenic Fungal Species that Cause Gladiolus (Gladiolus grandiflorus Hort.) Corm Rot in Mexico Enrique González-Pérez1, María de Jesús Yáñez-Morales2, Héctor Manuel Ortega- Escobar1, and Juan Velázquez-Mendoza3, Colegio de Postgraduados, 1Hidrociencias, 2Fitopatología, and 3Forestal, Campus Montecillo, km 36.5 Carr. México-Texcoco, Montecillo, Edo. de México CP 56230. Correspondence to: [email protected] (Received: July 16, 2008 Accepted: February 10, 2009) González-Pérez, E., Yáñez-Morales, M.J., Ortega-Escobar, este cultivo. Todas las especies fueron patogénicas, se H.M., and Velázquez-Mendoza, J. 2009. Comparative analysis agruparon en tres categorías por su agresividad para causar among pathogenic fungal species that cause gladiolus la enfermedad, difirieron en características culturales. Los (Gladiolus grandiflorus Hort.) corm rot in Mexico. Revista análisis moleculares corroboraron las especies identificadas Mexicana de Fitopatología 27:45-52. -
Review of Oxepine-Pyrimidinone-Ketopiperazine Type Nonribosomal Peptides
H OH metabolites OH Review Review of Oxepine-Pyrimidinone-Ketopiperazine Type Nonribosomal Peptides Yaojie Guo , Jens C. Frisvad and Thomas O. Larsen * Department of Biotechnology and Biomedicine, Technical University of Denmark, Søltofts Plads, Building 221, DK-2800 Kgs. Lyngby, Denmark; [email protected] (Y.G.); [email protected] (J.C.F.) * Correspondence: [email protected]; Tel.: +45-4525-2632 Received: 12 May 2020; Accepted: 8 June 2020; Published: 15 June 2020 Abstract: Recently, a rare class of nonribosomal peptides (NRPs) bearing a unique Oxepine-Pyrimidinone-Ketopiperazine (OPK) scaffold has been exclusively isolated from fungal sources. Based on the number of rings and conjugation systems on the backbone, it can be further categorized into three types A, B, and C. These compounds have been applied to various bioassays, and some have exhibited promising bioactivities like antifungal activity against phytopathogenic fungi and transcriptional activation on liver X receptor α. This review summarizes all the research related to natural OPK NRPs, including their biological sources, chemical structures, bioassays, as well as proposed biosynthetic mechanisms from 1988 to March 2020. The taxonomy of the fungal sources and chirality-related issues of these products are also discussed. Keywords: oxepine; nonribosomal peptides; bioactivity; biosynthesis; fungi; Aspergillus 1. Introduction Nonribosomal peptides (NRPs), mostly found in bacteria and fungi, are a class of peptidyl secondary metabolites biosynthesized by large modularly organized multienzyme complexes named nonribosomal peptide synthetases (NRPSs) [1]. These products are amongst the most structurally diverse secondary metabolites in nature; they exhibit a broad range of activities, which have been exploited in treatments such as the immunosuppressant cyclosporine A and the antibiotic daptomycin [2,3]. -
Biological Diversity in the Patent System
Biological Diversity in the Patent System Paul Oldham1,2*, Stephen Hall1,3, Oscar Forero1,4 1 ESRC Centre for Economic and Social Aspects of Genomics (Cesagen), Lancaster University, Lancaster, United Kingdom, 2 Institute of Advanced Studies, United Nations University, Yokohama, Japan, 3 One World Analytics, Lancaster, United Kingdom, 4 Centre for Development, Environment and Policy, SOAS, University of London, London, United Kingdom Abstract Biological diversity in the patent system is an enduring focus of controversy but empirical analysis of the presence of biodiversity in the patent system has been limited. To address this problem we text mined 11 million patent documents for 6 million Latin species names from the Global Names Index (GNI) established by the Global Biodiversity Information Facility (GBIF) and Encyclopedia of Life (EOL). We identified 76,274 full Latin species names from 23,882 genera in 767,955 patent documents. 25,595 species appeared in the claims section of 136,880 patent documents. This reveals that human innovative activity involving biodiversity in the patent system focuses on approximately 4% of taxonomically described species and between 0.8–1% of predicted global species. In this article we identify the major features of the patent landscape for biological diversity by focusing on key areas including pharmaceuticals, neglected diseases, traditional medicines, genetic engineering, foods, biocides, marine genetic resources and Antarctica. We conclude that the narrow focus of human innovative activity and ownership of genetic resources is unlikely to be in the long term interest of humanity. We argue that a broader spectrum of biodiversity needs to be opened up to research and development based on the principles of equitable benefit-sharing, respect for the objectives of the Convention on Biological Diversity, human rights and ethics. -
Characterization of Fungi from Hypersaline Environments of Solar Salterns Using Morphological and Molecular Techniques
mycological research 110 (2006) 962–970 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres Characterization of fungi from hypersaline environments of solar salterns using morphological and molecular techniques Sharon A. CANTRELLa,*, Lilliam CASILLAS-MARTI´NEZb, Marirosa MOLINAc aDepartment of Biology, School of Science and Technology, Universidad del Turabo, P. O. Box 3030, Gurabo, PR 00778, USA bBiology Department, University of Puerto Rico, CUH Station, Humacao, PR 00791, USA cEnvironmental Protection Agency, ORD, Athens, GA 30602 USA article info abstract Article history: The Cabo Rojo Solar Salterns located on the southwest coast of Puerto Rico are composed of Received 22 December 2005 two main ecosystems (i.e., salt ponds and microbial mats). Even though these locations are Received in revised form characterized by high solar radiation (mean light intensity of 39 mol photons mÀ2 dÀ1)they 24 April 2006 harbour a diverse microscopic life. We used morphological and molecular techniques to Accepted 1 June 2006 identify a series of halotolerant fungi. A total of 183 isolates and 36 species were cultured Published online 10 August 2006 in this study. From the water from the salt ponds, 86 isolates of 26 species were cultured. Corresponding Editor: John Dighton The halotolerant fungi isolated from water were: Cladosporium cladosporioides, nine Aspergillus sp., five Penicillium sp. and the black yeast Hortaea werneckii. A distinctive isolate with a blue Keywords: mycelium was cultured from the salt ponds, representing a new species of Periconia based Evaporation ponds on morphology and rDNA analysis. Forty-four isolates from eight species were cultured Halophilic fungi from the sediments around the salt ponds. -
Depsidone Derivatives and a Cyclopeptide Produced by Marine Fungus Aspergillus Unguis Under Chemical Induction and by Its Plasma Induced Mutant
molecules Article Depsidone Derivatives and a Cyclopeptide Produced by Marine Fungus Aspergillus unguis under Chemical Induction and by Its Plasma Induced Mutant Wen-Cong Yang 1,† ID , Hai-Yan Bao 1,2,†, Ya-Yue Liu 1, Ying-Ying Nie 1,3, Jing-Ming Yang 1, Peng-Zhi Hong 1,3 and Yi Zhang 1,3,* ID 1 Research Institute for Marine Drugs and Nutrition, College of Food Science and Technology, Guangdong Provincial Key Laboratory of Aquatic Product Processing and Safety, Guangdong Province Engineering Laboratory for Marine Biological Products, Guangdong Ocean University, Zhanjiang 524088, China; [email protected] (W.-C.Y.); [email protected] (H.-Y.B.); [email protected] (Y.-Y.L.); [email protected] (Y.-Y.N.); [email protected] (J.-M.Y.); [email protected] (P.-Z.H.) 2 School of Environmental and Chemical Engineering, Dalian Jiaotong University, Dalian 116028, China 3 Shenzhen Institute of Guangdong Ocean University, Shenzhen 518120, China * Correspondence: [email protected]; Tel.: +86-759-2396046 † These authors contributed equally to this work. Academic Editor: Francesco Epifano Received: 17 August 2018; Accepted: 30 August 2018; Published: 3 September 2018 Abstract: A new depsidone derivative (1), aspergillusidone G, was isolated from a marine fungus Aspergillus unguis, together with eight known depsidones (2–9) and a cyclic peptide (10): agonodepside A (2), nornidulin (3), nidulin (4), aspergillusidone F (5), unguinol (6), aspergillusidone C(7), 2-chlorounguinol (8), aspergillusidone A (9), and unguisin A (10). Compounds 1–4 and 7–9 were obtained from the plasma induced mutant of this fungus, while 5, 6, and 10 were isolated from the original strain under chemical induction. -
Identification of Acremonium Isolates from Grapevines and Evaluation of Their Antagonism Towards Plasmopara Viticola
Identification of Acremonium isolates from grapevines and evaluation of their antagonism towards Plasmopara viticola Sandra Lo Piccolo, Antonio Alfonzo, Selene Giambra, Gaetano Conigliaro, Luis V. Lopez-Llorca & Santella Burruano Annals of Microbiology ISSN 1590-4261 Ann Microbiol DOI 10.1007/s13213-015-1082-5 1 23 Your article is protected by copyright and all rights are held exclusively by Springer- Verlag Berlin Heidelberg and the University of Milan. This e-offprint is for personal use only and shall not be self-archived in electronic repositories. If you wish to self- archive your article, please use the accepted manuscript version for posting on your own website. You may further deposit the accepted manuscript version in any repository, provided it is only made publicly available 12 months after official publication or later and provided acknowledgement is given to the original source of publication and a link is inserted to the published article on Springer's website. The link must be accompanied by the following text: "The final publication is available at link.springer.com”. 1 23 Author's personal copy Ann Microbiol DOI 10.1007/s13213-015-1082-5 ORIGINAL ARTICLE Identification of Acremonium isolates from grapevines and evaluation of their antagonism towards Plasmopara viticola Sandra Lo Piccolo1 & Antonio Alfonzo1 & Selene Giambra1 & Gaetano Conigliaro1 & Luis V. Lopez-Llorca2 & Santella Burruano 1 Received: 8 July 2014 /Accepted: 1 April 2015 # Springer-Verlag Berlin Heidelberg and the University of Milan 2015 Abstract Some endophytic fungal genera in Vitis vinifera, Keywords Fungal endophytes . Phylogeny . RAPD . including Acremonium,havebeenreportedasantagonistsof Inhibition . Sporangia germination . Vitis vinifera Plasmopara viticola.EndophyticAcremonium isolates from an asymptomatic grapevine cultivar Inzolia from Italy were identified by morphological features and multigene phyloge- Introduction nies of ITS, 18S and 28S genes, and their intra-specific geno- mic diversity was analyzed by RAPD analysis. -
Metabolites from Nematophagous Fungi and Nematicidal Natural Products from Fungi As an Alternative for Biological Control
Appl Microbiol Biotechnol (2016) 100:3799–3812 DOI 10.1007/s00253-015-7233-6 MINI-REVIEW Metabolites from nematophagous fungi and nematicidal natural products from fungi as an alternative for biological control. Part I: metabolites from nematophagous ascomycetes Thomas Degenkolb1 & Andreas Vilcinskas1,2 Received: 4 October 2015 /Revised: 29 November 2015 /Accepted: 2 December 2015 /Published online: 29 December 2015 # The Author(s) 2015. This article is published with open access at Springerlink.com Abstract Plant-parasitic nematodes are estimated to cause Keywords Phytoparasitic nematodes . Nematicides . global annual losses of more than US$ 100 billion. The num- Oligosporon-type antibiotics . Nematophagous fungi . ber of registered nematicides has declined substantially over Secondary metabolites . Biocontrol the last 25 years due to concerns about their non-specific mechanisms of action and hence their potential toxicity and likelihood to cause environmental damage. Environmentally Introduction beneficial and inexpensive alternatives to chemicals, which do not affect vertebrates, crops, and other non-target organisms, Nematodes as economically important crop pests are therefore urgently required. Nematophagous fungi are nat- ural antagonists of nematode parasites, and these offer an eco- Among more than 26,000 known species of nematodes, 8000 physiological source of novel biocontrol strategies. In this first are parasites of vertebrates (Hugot et al. 2001), whereas 4100 section of a two-part review article, we discuss 83 nematicidal are parasites of plants, mostly soil-borne root pathogens and non-nematicidal primary and secondary metabolites (Nicol et al. 2011). Approximately 100 species in this latter found in nematophagous ascomycetes. Some of these sub- group are considered economically important phytoparasites stances exhibit nematicidal activities, namely oligosporon, of crops. -
Cloacal Mycobiota in Wild Females of Caiman Latirostris (Crocodylia: Alligatoridae)
Revista Mexicana de Biodiversidad 84: 722-726, 2013 722 Nuñez-Otaño et al.- Cloacal mycobiota of DOI:broud-snouted 10.7550/rmb.32425 caimans Research note Cloacal mycobiota in wild females of Caiman latirostris (Crocodylia: Alligatoridae) Micobiota cloacal de hembras de Caiman latirostris (Crocodylia: Alligatoridae) en estado silvestre Noelia Betiana Núñez-Otaño1,2 , Carlos Ignacio Piña1, 2, 3, 4, Thiago Costa Gonçalves Portelinha1, 2, 3 and Angélica Margarita Arambarri5 1Laboratorio de Ecología Animal. Centro de Investigaciones Científicas y Transferencia de Tecnología a la Producción, Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) Dr. Materi y España. CP 3105. Diamante (Entre Ríos), Argentina. 2Laboratorio de Zoología Aplicada: Anexo Vertebrados (FHUC-UNL / MASPyMA). CP. 3000 Santa Fe, Argentina. 3Facultad de Ciencias y Tecnología (UAdER). CP. 3105 Argentina. 4Facultad de Ciencias de la Alimentación (UNER). CP. 3100 Argentina. 5Laboratorio de Hongos Imperfectos. Instituto de Botánica Carlos Spegazzini. Facultad de Ciencias Naturales y Museo. CP. 1900 La Plata (Buenos Aires), Argentina. [email protected] Abstract. There are few reports of cloacal mycobiota on wild reptiles, and in particular, fungal presence and function in Caiman latirostris remains unknown. Our objective was to describe the fungal community present in the cloaca of wild female broad-snouted caimans during their reproductive season determine whether the number of fungi has some relationship with the female’s corporeal condition. Fungi were found in 9 out of 13 cloacal samples and 14 species of fungi were isolated and identified. Three of the species isolated had the highest occurrence values, and 2 of them are pathogenic. In this case, body condition index had no relationship with fungal frequency; the fungi found in this study may have originated from soil habitat and nest substrate that are in constant contact with the cloaca of the C. -
Redalyc.Assessment of Non-Cultured Aquatic Fungal Diversity from Differenthabitats in Mexico
Revista Mexicana de Biodiversidad ISSN: 1870-3453 [email protected] Universidad Nacional Autónoma de México México Valderrama, Brenda; Paredes-Valdez, Guadalupe; Rodríguez, Rocío; Romero-Guido, Cynthia; Martínez, Fernando; Martínez-Romero, Julio; Guerrero-Galván, Saúl; Mendoza- Herrera, Alberto; Folch-Mallol, Jorge Luis Assessment of non-cultured aquatic fungal diversity from differenthabitats in Mexico Revista Mexicana de Biodiversidad, vol. 87, núm. 1, marzo, 2016, pp. 18-28 Universidad Nacional Autónoma de México Distrito Federal, México Available in: http://www.redalyc.org/articulo.oa?id=42546734003 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Available online at www.sciencedirect.com Revista Mexicana de Biodiversidad Revista Mexicana de Biodiversidad 87 (2016) 18–28 www.ib.unam.mx/revista/ Taxonomy and systematics Assessment of non-cultured aquatic fungal diversity from different habitats in Mexico Estimación de la diversidad de hongos acuáticos no-cultivables de diferentes hábitats en México a a b b Brenda Valderrama , Guadalupe Paredes-Valdez , Rocío Rodríguez , Cynthia Romero-Guido , b c d Fernando Martínez , Julio Martínez-Romero , Saúl Guerrero-Galván , e b,∗ Alberto Mendoza-Herrera , Jorge Luis Folch-Mallol a Instituto de Biotecnología, Universidad Nacional Autónoma de México, Avenida Universidad 2001, Col. Chamilpa, 62210 Cuernavaca, Morelos, Mexico b Centro de Investigación en Biotecnología, Universidad Autónoma del Estado de Morelos, Avenida Universidad 1001, Col. Chamilpa, 62209 Cuernavaca, Morelos, Mexico c Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Avenida Universidad s/n, Col. -
Antimicrobial and Cytotoxic Activities Screening of Fungal Secondary Metabolites Isolated from Marine Sponge Callyspongia Sp
cx Antimicrobial and cytotoxic activities screening of fungal secondary metabolites isolated from marine sponge Callyspongia sp. 1Dian Handayani, 1,2Muh A. Artasasta, 1Dian Mutia, 1Nurul Atikah, 1Rustini, 3Trina E. Tallei 1 Sumatran Biota Laboratory, Faculty of Pharmacy, University of Andalas, Padang, West Sumatera, Indonesia; 2 Biotechnology Department, Faculty of Mathematics and Natural Sciences, Malang State University (UM), Malang, Indonesia; 3 Department of Biology, Faculty of Mathematics and Natural Sciences, Sam Ratulangi University, Manado, Indonesia. Corresponding author: D. Handayani, [email protected] Abstract. Secondary metabolites from marine sponge-derived fungi repeatedly showed potential bioactive activity against several diseases. In this study, screening for antibacterial and cytotoxic isolated fungi from marine sponge Callyspongia sp. have been performed. A common media for culturing fungi, sodium dextrose agar (SDA), was used. For fungal isolates the streak plate method was used. Each pure fungal isolate was cultivated on rice media under room temperature for 4-8 weeks then extracted with ethyl acetate. Thirteen pure fungal isolates were successfully obtained from Callyspongia sp. Ethyl acetate extract of all isolated fungi was tested for antimicrobial activity against pathogenic microbes using the disk diffusion method and cytotoxic activity using brine shrimp lethality test (BSLT). Of thirteen fungal isolates, only Cas 02 showed antimicrobial activity against Staphylococcus aureus (SA) ATCC 2592 and Escherichia coli (EC) ATCC 25922 with a diameter of inhibition zone of 12.75 mm and 17.16 mm respectively. The cytotoxic activity results showed that only isolate Cas03 had a potential activity with -1 LC50 < 30 µg mL and four fungal strains (Cas02, Cas06, Cas07, and Cas09) had a moderate activity -1 with LC50 < 100 µg mL . -
Mining of Cryptic Secondary Metabolism in Aspergillus
Downloaded from orbit.dtu.dk on: Oct 10, 2021 Mining of Cryptic Secondary Metabolism in Aspergillus Guo, Yaojie Publication date: 2020 Document Version Publisher's PDF, also known as Version of record Link back to DTU Orbit Citation (APA): Guo, Y. (2020). Mining of Cryptic Secondary Metabolism in Aspergillus. DTU Bioengineering. General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. Users may download and print one copy of any publication from the public portal for the purpose of private study or research. You may not further distribute the material or use it for any profit-making activity or commercial gain You may freely distribute the URL identifying the publication in the public portal If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Mining of Cryptic Secondary Metabolism in Aspergillus O O O N R HN O N N N O O O OH OH O O OH OH OH O OH O OH OH OH OH HO O OH OH O OH OH OH O Yaojie Guo PhD Thesis Department of Biotechnology and Biomedicine Technical University of Denmark September 2020 Mining of Cryptic Secondary Metabolism in Aspergillus Yaojie Guo PhD Thesis Department of Biotechnology and Biomedicine Technical University of Denmark September 2020 Supervisors: Professor Thomas Ostenfeld Larsen Professor Uffe Hasbro Mortensen Preface This thesis is submitted to the Technical University of Denmark (Danmarks Tekniske Universitet, DTU) in partial fulfillment of the requirements for the Degree of Doctor of Philosophy. -
Diversity and Bioprospection of Fungal Community Present in Oligotrophic Soil of Continental Antarctica
Extremophiles (2015) 19:585–596 DOI 10.1007/s00792-015-0741-6 ORIGINAL PAPER Diversity and bioprospection of fungal community present in oligotrophic soil of continental Antarctica Valéria M. Godinho · Vívian N. Gonçalves · Iara F. Santiago · Hebert M. Figueredo · Gislaine A. Vitoreli · Carlos E. G. R. Schaefer · Emerson C. Barbosa · Jaquelline G. Oliveira · Tânia M. A. Alves · Carlos L. Zani · Policarpo A. S. Junior · Silvane M. F. Murta · Alvaro J. Romanha · Erna Geessien Kroon · Charles L. Cantrell · David E. Wedge · Stephen O. Duke · Abbas Ali · Carlos A. Rosa · Luiz H. Rosa Received: 20 November 2014 / Accepted: 16 February 2015 / Published online: 26 March 2015 © Springer Japan 2015 Abstract We surveyed the diversity and capability of understanding eukaryotic survival in cold-arid oligotrophic producing bioactive compounds from a cultivable fungal soils. We hypothesize that detailed further investigations community isolated from oligotrophic soil of continen- may provide a greater understanding of the evolution of tal Antarctica. A total of 115 fungal isolates were obtained Antarctic fungi and their relationships with other organisms and identified in 11 taxa of Aspergillus, Debaryomyces, described in that region. Additionally, different wild pristine Cladosporium, Pseudogymnoascus, Penicillium and Hypo- bioactive fungal isolates found in continental Antarctic soil creales. The fungal community showed low diversity and may represent a unique source to discover prototype mol- richness, and high dominance indices. The extracts of ecules for use in drug and biopesticide discovery studies. Aspergillus sydowii, Penicillium allii-sativi, Penicillium brevicompactum, Penicillium chrysogenum and Penicil- Keywords Antarctica · Drug discovery · Ecology · lium rubens possess antiviral, antibacterial, antifungal, Fungi · Taxonomy antitumoral, herbicidal and antiprotozoal activities.