Cloacal Mycobiota in Wild Females of Caiman Latirostris (Crocodylia: Alligatoridae)
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(Gladiolus Grandiflorus Hort.) Corm Rot in Mexico Revista Mexicana De Fitopatología, Vol
Revista Mexicana de Fitopatología ISSN: 0185-3309 [email protected] Sociedad Mexicana de Fitopatología, A.C. México González-Pérez, Enrique; Yáñez-Morales, María de Jesús; Ortega-Escobar, Héctor Manuel; Velázquez-Mendoza, Juan Comparative Analysis among Pathogenic Fungal Species that Cause Gladiolus (Gladiolus grandiflorus Hort.) Corm Rot in Mexico Revista Mexicana de Fitopatología, vol. 27, núm. 1, enero-junio, 2009, pp. 45-52 Sociedad Mexicana de Fitopatología, A.C. Texcoco, México Available in: http://www.redalyc.org/articulo.oa?id=61211414006 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Revista Mexicana de FITOPATOLOGIA/ 45 Comparative Analysis among Pathogenic Fungal Species that Cause Gladiolus (Gladiolus grandiflorus Hort.) Corm Rot in Mexico Enrique González-Pérez1, María de Jesús Yáñez-Morales2, Héctor Manuel Ortega- Escobar1, and Juan Velázquez-Mendoza3, Colegio de Postgraduados, 1Hidrociencias, 2Fitopatología, and 3Forestal, Campus Montecillo, km 36.5 Carr. México-Texcoco, Montecillo, Edo. de México CP 56230. Correspondence to: [email protected] (Received: July 16, 2008 Accepted: February 10, 2009) González-Pérez, E., Yáñez-Morales, M.J., Ortega-Escobar, este cultivo. Todas las especies fueron patogénicas, se H.M., and Velázquez-Mendoza, J. 2009. Comparative analysis agruparon en tres categorías por su agresividad para causar among pathogenic fungal species that cause gladiolus la enfermedad, difirieron en características culturales. Los (Gladiolus grandiflorus Hort.) corm rot in Mexico. Revista análisis moleculares corroboraron las especies identificadas Mexicana de Fitopatología 27:45-52. -
Biological Diversity in the Patent System
Biological Diversity in the Patent System Paul Oldham1,2*, Stephen Hall1,3, Oscar Forero1,4 1 ESRC Centre for Economic and Social Aspects of Genomics (Cesagen), Lancaster University, Lancaster, United Kingdom, 2 Institute of Advanced Studies, United Nations University, Yokohama, Japan, 3 One World Analytics, Lancaster, United Kingdom, 4 Centre for Development, Environment and Policy, SOAS, University of London, London, United Kingdom Abstract Biological diversity in the patent system is an enduring focus of controversy but empirical analysis of the presence of biodiversity in the patent system has been limited. To address this problem we text mined 11 million patent documents for 6 million Latin species names from the Global Names Index (GNI) established by the Global Biodiversity Information Facility (GBIF) and Encyclopedia of Life (EOL). We identified 76,274 full Latin species names from 23,882 genera in 767,955 patent documents. 25,595 species appeared in the claims section of 136,880 patent documents. This reveals that human innovative activity involving biodiversity in the patent system focuses on approximately 4% of taxonomically described species and between 0.8–1% of predicted global species. In this article we identify the major features of the patent landscape for biological diversity by focusing on key areas including pharmaceuticals, neglected diseases, traditional medicines, genetic engineering, foods, biocides, marine genetic resources and Antarctica. We conclude that the narrow focus of human innovative activity and ownership of genetic resources is unlikely to be in the long term interest of humanity. We argue that a broader spectrum of biodiversity needs to be opened up to research and development based on the principles of equitable benefit-sharing, respect for the objectives of the Convention on Biological Diversity, human rights and ethics. -
Identification of Acremonium Isolates from Grapevines and Evaluation of Their Antagonism Towards Plasmopara Viticola
Identification of Acremonium isolates from grapevines and evaluation of their antagonism towards Plasmopara viticola Sandra Lo Piccolo, Antonio Alfonzo, Selene Giambra, Gaetano Conigliaro, Luis V. Lopez-Llorca & Santella Burruano Annals of Microbiology ISSN 1590-4261 Ann Microbiol DOI 10.1007/s13213-015-1082-5 1 23 Your article is protected by copyright and all rights are held exclusively by Springer- Verlag Berlin Heidelberg and the University of Milan. This e-offprint is for personal use only and shall not be self-archived in electronic repositories. If you wish to self- archive your article, please use the accepted manuscript version for posting on your own website. You may further deposit the accepted manuscript version in any repository, provided it is only made publicly available 12 months after official publication or later and provided acknowledgement is given to the original source of publication and a link is inserted to the published article on Springer's website. The link must be accompanied by the following text: "The final publication is available at link.springer.com”. 1 23 Author's personal copy Ann Microbiol DOI 10.1007/s13213-015-1082-5 ORIGINAL ARTICLE Identification of Acremonium isolates from grapevines and evaluation of their antagonism towards Plasmopara viticola Sandra Lo Piccolo1 & Antonio Alfonzo1 & Selene Giambra1 & Gaetano Conigliaro1 & Luis V. Lopez-Llorca2 & Santella Burruano 1 Received: 8 July 2014 /Accepted: 1 April 2015 # Springer-Verlag Berlin Heidelberg and the University of Milan 2015 Abstract Some endophytic fungal genera in Vitis vinifera, Keywords Fungal endophytes . Phylogeny . RAPD . including Acremonium,havebeenreportedasantagonistsof Inhibition . Sporangia germination . Vitis vinifera Plasmopara viticola.EndophyticAcremonium isolates from an asymptomatic grapevine cultivar Inzolia from Italy were identified by morphological features and multigene phyloge- Introduction nies of ITS, 18S and 28S genes, and their intra-specific geno- mic diversity was analyzed by RAPD analysis. -
Biodiversity of Trichoderma in Neotropics
13 Biodiversity of Trichoderma in Neotropics Lilliana Hoyos-Carvajal1 and John Bissett2 1Universidad Nacional de Colombia, Sede Bogotá 2Agriculture and Agri-Food Canada, Eastern Cereal and Oilseed Research Centre, Ottawa 1Colombia 2Canada 1. Introduction Trichoderma species frequently are predominant over wide geographic regions in all climatic zones, where they are significant decomposers of woody and herbaceous materials. They are characterized by rapid growth, an ability to assimilate a diverse array of substrates, and by their production of an range of antimicrobials. Strains have been exploited for production of enzymes and antibiotics, bioremediation of xenobiotic substances, and as biological control agents against plant pathogenic fungi and nematodes. The main use of Trichoderma in global trade is derived from its high production of enzymes. Trichoderma reesei (teleomorph: Hypocrea jecorina) is the most widely employed cellulolytic organism in the world, although high levels of cellulase production are also seen in other species of this genus (Baig et al., 2003, Watanabe et al., 2006). Worldwide sales of enzymes had reached the figure of $ 1.6 billion by the year 2000 (Demain 2000, cited by Karmakar and Ray, 2011), with an annual growth of 6.5 to 10% not including pharmaceutical enzymes (Stagehands, 2008). Of these, cellulases comprise approximately 20% of the enzymes marketed worldwide (Tramoy et al., 2009). Cellulases of microbial origin are used to process food and animal feed, biofuel production, baking, textiles, detergents, paper pulp, agriculture and research areas at all levels (Karmakar and Ray, 2011). Most cellulases are derived from Trichoderma (section Longibrachiatum in particular) and Aspergillus (Begum et al., 2009). -
Metabolites from Nematophagous Fungi and Nematicidal Natural Products from Fungi As an Alternative for Biological Control
Appl Microbiol Biotechnol (2016) 100:3799–3812 DOI 10.1007/s00253-015-7233-6 MINI-REVIEW Metabolites from nematophagous fungi and nematicidal natural products from fungi as an alternative for biological control. Part I: metabolites from nematophagous ascomycetes Thomas Degenkolb1 & Andreas Vilcinskas1,2 Received: 4 October 2015 /Revised: 29 November 2015 /Accepted: 2 December 2015 /Published online: 29 December 2015 # The Author(s) 2015. This article is published with open access at Springerlink.com Abstract Plant-parasitic nematodes are estimated to cause Keywords Phytoparasitic nematodes . Nematicides . global annual losses of more than US$ 100 billion. The num- Oligosporon-type antibiotics . Nematophagous fungi . ber of registered nematicides has declined substantially over Secondary metabolites . Biocontrol the last 25 years due to concerns about their non-specific mechanisms of action and hence their potential toxicity and likelihood to cause environmental damage. Environmentally Introduction beneficial and inexpensive alternatives to chemicals, which do not affect vertebrates, crops, and other non-target organisms, Nematodes as economically important crop pests are therefore urgently required. Nematophagous fungi are nat- ural antagonists of nematode parasites, and these offer an eco- Among more than 26,000 known species of nematodes, 8000 physiological source of novel biocontrol strategies. In this first are parasites of vertebrates (Hugot et al. 2001), whereas 4100 section of a two-part review article, we discuss 83 nematicidal are parasites of plants, mostly soil-borne root pathogens and non-nematicidal primary and secondary metabolites (Nicol et al. 2011). Approximately 100 species in this latter found in nematophagous ascomycetes. Some of these sub- group are considered economically important phytoparasites stances exhibit nematicidal activities, namely oligosporon, of crops. -
Two New Species and a New Chinese Record of Hypocreaceae As Evidenced by Morphological and Molecular Data
MYCOBIOLOGY 2019, VOL. 47, NO. 3, 280–291 https://doi.org/10.1080/12298093.2019.1641062 RESEARCH ARTICLE Two New Species and a New Chinese Record of Hypocreaceae as Evidenced by Morphological and Molecular Data Zhao Qing Zeng and Wen Ying Zhuang State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, P.R. China ABSTRACT ARTICLE HISTORY To explore species diversity of Hypocreaceae, collections from Guangdong, Hubei, and Tibet Received 13 February 2019 of China were examined and two new species and a new Chinese record were discovered. Revised 27 June 2019 Morphological characteristics and DNA sequence analyses of the ITS, LSU, EF-1a, and RPB2 Accepted 4 July 2019 regions support their placements in Hypocreaceae and the establishments of the new spe- Hypomyces hubeiensis Agaricus KEYWORDS cies. sp. nov. is characterized by occurrence on fruitbody of Hypomyces hubeiensis; sp., concentric rings formed on MEA medium, verticillium-like conidiophores, subulate phia- morphology; phylogeny; lides, rod-shaped to narrowly ellipsoidal conidia, and absence of chlamydospores. Trichoderma subiculoides Trichoderma subiculoides sp. nov. is distinguished by effuse to confluent rudimentary stro- mata lacking of a well-developed flank and not changing color in KOH, subcylindrical asci containing eight ascospores that disarticulate into 16 dimorphic part-ascospores, verticillium- like conidiophores, subcylindrical phialides, and subellipsoidal to rod-shaped conidia. Morphological distinctions between the new species and their close relatives are discussed. Hypomyces orthosporus is found for the first time from China. 1. Introduction Members of the genus are mainly distributed in temperate and tropical regions and economically The family Hypocreaceae typified by Hypocrea Fr. -
Molecular Cloning and Heterologous Expression of Manganese(II)-Oxidizing Enzyme from Acremonium Strictum Strain KR21-2
Supplementary Material Molecular Cloning and Heterologous Expression of Manganese(II)-Oxidizing Enzyme from Acremonium strictum Strain KR21-2 Fuyumi Tojo 1, Ayumi Kitayama 2, Naoyuki Miyata 2,*, Kunihiro Okano 2, Jun Fukushima 3, Ryuichiro Suzuki 4 and Yukinori Tani 5 1 Akita Research Institute of Food and Brewing, 4-26 Sanuki, Arayamachi, Akita 010-1623, Japan; [email protected] 2 Department of Biological Environment, Akita Prefectural University, Shimoshinjo-Nakano, Akita 010-0195, Japan; [email protected] (A.K.); [email protected] (K.O.) 3 Department of Biotechnology, Akita Prefectural Univ1ersity, Shimoshinjo-Nakano, Akita 010-0195, Japan; [email protected] 4 Department of Biological Production, Akita Prefectural University, Shimoshinjo-Nakano, Akita 010-0195, Japan; [email protected] 5 Department of Environmental Health Sciences, Graduate School of Nutritional and Environmental Sciences, University of Shizuoka, 52-1 Yada, Shizuoka 422-8526, Japan; [email protected] * Correspondence: [email protected]; Tel.: +81-18-872-1660 Received: 26 May 2020; Accepted: 16 June 2020; Published: date (Figure S1) Figure S1. Nucleotide and deduced amino acid sequences of mco1 gene from A. strictum KR21-2. Underlined 25 amino acids correspond to the N-terminus of matured Mco1 determined previously (see ref. [23] in the Text). The amino acid residues at positions 149 are predicted signal peptide. Conserved Cu-binding regions are boxed, and bold characters in the box represent the Cu-binding residues. Shaded nucleotide sequences represent introns. Sequences with wavy underline indicate the targets of primers used in PCR amplification of the gene. -
Enhancing the Potentiality of Trichoderma Harzianum Against Pythium Pathogen of Beans Using Chamomile (Matricaria Chamomilla, L.) Flower Extract
molecules Article Enhancing the Potentiality of Trichoderma harzianum against Pythium Pathogen of Beans Using Chamomile (Matricaria chamomilla, L.) Flower Extract Abeer Abdulkhalek Ghoniem 1, Kamar M. Abd El-Hai 2, Ayman Y. El-khateeb 3, Noha M. Eldadamony 4, Samy F. Mahmoud 5 and Ashraf Elsayed 6,* 1 Microbial Activity Unit, Department of Microbiology, Soils, Water and Environment Research Institute, Agricultural Research Center, Giza 12619, Egypt; [email protected] 2 Department of Leguminous and Forage Crop Diseases, Plant Pathology Research Institute, Agricultural Research Center, Giza 12112, Egypt; [email protected] 3 Department of Agricultural Chemistry, Faculty of Agriculture, Mansoura University, Elgomhouria St., Mansoura 35516, Egypt; [email protected] 4 Seed Pathology Department, Plant Pathology Institute, Agricultural Research Center, Giza 12112, Egypt; [email protected] 5 Department of Biotechnology, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia; [email protected] 6 Botany Department, Faculty of Science, Mansoura University, Elgomhouria St., Mansoura 35516, Egypt * Correspondence: [email protected] Abstract: Our present study was designed to investigate the role of both Trichoderma harzianum and Citation: Ghoniem, A.A.; Abd chamomile (Matricaria chamomilla L.) flower extract in mutual reaction against growth of Pythium El-Hai, K.M.; El-khateeb, A.Y.; ultimum. In vitro, the activity of chamomile extract was found to reduce the radial growth of Eldadamony, N.M.; Mahmoud, S.F.; Pythium ultimum up to 30% compared to the control. Whereas, the radial growth reduction effect Elsayed, A. Enhancing the of T. harzianum against P. ultimum reached 81.6% after 120 h. -
Trichoderma: the “Secrets” of a Multitalented Biocontrol Agent
plants Review Trichoderma: The “Secrets” of a Multitalented Biocontrol Agent 1, 1, 2 3 Monika Sood y, Dhriti Kapoor y, Vipul Kumar , Mohamed S. Sheteiwy , Muthusamy Ramakrishnan 4 , Marco Landi 5,6,* , Fabrizio Araniti 7 and Anket Sharma 4,* 1 School of Bioengineering and Biosciences, Lovely Professional University, Jalandhar-Delhi G.T. Road (NH-1), Phagwara, Punjab 144411, India; [email protected] (M.S.); [email protected] (D.K.) 2 School of Agriculture, Lovely Professional University, Delhi-Jalandhar Highway, Phagwara, Punjab 144411, India; [email protected] 3 Department of Agronomy, Faculty of Agriculture, Mansoura University, Mansoura 35516, Egypt; [email protected] 4 State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou 311300, China; [email protected] 5 Department of Agriculture, University of Pisa, I-56124 Pisa, Italy 6 CIRSEC, Centre for Climatic Change Impact, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy 7 Dipartimento AGRARIA, Università Mediterranea di Reggio Calabria, Località Feo di Vito, SNC I-89124 Reggio Calabria, Italy; [email protected] * Correspondence: [email protected] (M.L.); [email protected] (A.S.) Authors contributed equal. y Received: 25 May 2020; Accepted: 16 June 2020; Published: 18 June 2020 Abstract: The plant-Trichoderma-pathogen triangle is a complicated web of numerous processes. Trichoderma spp. are avirulent opportunistic plant symbionts. In addition to being successful plant symbiotic organisms, Trichoderma spp. also behave as a low cost, effective and ecofriendly biocontrol agent. They can set themselves up in various patho-systems, have minimal impact on the soil equilibrium and do not impair useful organisms that contribute to the control of pathogens. -
Genome Sequence of Trichoderma Lixii MUT3171, a Promising Strain for Mycoremediation of PAH-Contaminated Sites
microorganisms Article Genome Sequence of Trichoderma lixii MUT3171, A Promising Strain for Mycoremediation of PAH-Contaminated Sites Francesco Venice 1, Domenico Davolos 2, Federica Spina 3 , Anna Poli 3, Valeria Paola Prigione 3, Giovanna Cristina Varese 3,* and Stefano Ghignone 1 1 Institute for Sustainable Plant Protection (IPSP)–SS Turin—National Research Council (CNR), Viale Mattioli 25, 10125 Turin, Italy; [email protected] (F.V.); [email protected] (S.G.) 2 Department of Technological Innovations and Safety of Plants, Products and Anthropic Settlements (DIT), INAIL, Research Area, Via R. Ferruzzi 38/40, 00143 Rome, Italy; [email protected] 3 Department of Life Sciences and System Biology, University of Turin, Viale Mattioli 25, 10125 Turin, Italy; [email protected] (F.S.); [email protected] (A.P.); [email protected] (V.P.P.) * Correspondence: [email protected]; Tel.: +39-011-670-5984 Received: 14 July 2020; Accepted: 17 August 2020; Published: 20 August 2020 Abstract: Mono- and polycyclic aromatic hydrocarbons (PAHs) are widespread and recalcitrant pollutants that threaten both environmental and human health. By exploiting the powerful enzymatic machinery of fungi, mycoremediation in contaminated sites aims at removing a wide range of pollutants in a cost-efficient and environmentally friendly manner. Next-generation sequencing (NGS) techniques are powerful tools for understanding the molecular basis of biotransformation of PAHs by selected fungal strains, allowing genome mining to identify genetic features of biotechnological value. Trichoderma lixii MUT3171, isolated from a historically PAH-contaminated soil in Italy, can grow on phenanthrene, as a sole carbon source. -
Antagonistic Activity of Trichoderma Asperellum and Trichoderma Harzianum Against Genetically Diverse Botrytis Cinerea Isolates
RESEARCH Antagonistic activity of Trichoderma asperellum and Trichoderma harzianum against genetically diverse Botrytis cinerea isolates Biljana Kuzmanovska1*, Rade Rusevski1, Mirjana Jankulovska1, and Katerina B. Oreshkovikj2 1Ss. Cyril and Methodius University, Faculty of Agricultural Sciences and Food, 16-ta Makedonska brigada 3, 1000 Skopje, Republic of Macedonia. *Corresponding author ([email protected]). 2Ss. Cyril and Methodius University, Institute of Agriculture, blvd. Aleksandar Makedonski bb, 1000 Skopje, Republic of Macedonia. Received: 3 Abril 2018; Accepted: 22 June 2018; doi:10.4067/S0718-58392018000300391 ABSTRACT Trichoderma species have been identified as potential biocontrol agents of many plant pathogenic fungi, including Botrytis cinerea Pers., one of the major pathogens in tomato (Solanum lycopersicum L.) production in the Republic of Macedonia. The aim of this study was to evaluate the in vitro antagonistic activity of Trichoderma asperellum and T. harzianum against 18 genetically diverse B. cinerea isolates. The results showed considerable antagonistic abilities of both Trichoderma species against all tested B. cinerea isolates. Both antagonists significantly (p < 0.01) inhibited the mycelial growth (T. asperellum from 74.246% to 96.915% and T. harzianum from 71.072% to 95.889%) and conidial germination (T. asperellum from 76.932% to 95.107% and T. harzianum from 76.933% to 93.658%) of B. cinerea isolates. The antagonistic abilities were not related to the genetic group, but apparent association with the region of origin of the pathogen isolates was observed. Trichoderma asperellum and T. harzianum are promising biocontrol agents for control of gray mold disease in tomato. Key words: Gray mold, mycoparasitism, PICG, PIMG, Solanum lycopersicum, tomato. -
Network Analysis Reveals Different Strategies of Trichoderma Spp
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.02.074344; this version posted March 17, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Network analysis reveals different strategies of Trichoderma spp. associated with 2 XYR1 and CRE1 during cellulose degradation 3 4 Strategies of Trichoderma spp. associated with XYR1 and CRE1 during cellulose degradation 5 6 Rafaela Rossi Rosolen1,2, Alexandre Hild Aono1,2, Déborah Aires Almeida1,2, Jaire Alves 7 Ferreira Filho1,2, Maria Augusta Crivelente Horta1, Anete Pereira de Souza1,3* 8 9 1 Center for Molecular Biology and Genetic Engineering (CBMEG), University of Campinas 10 (UNICAMP), Cidade Universitária Zeferino Vaz, Campinas, SP, Brazil 11 2 Graduate Program in Genetics and Molecular Biology, Institute of Biology, UNICAMP, 12 Campinas, SP, Brazil 13 3 Department of Plant Biology, Institute of Biology, UNICAMP, Cidade Universitária Zeferino 14 Vaz, Rua Monteiro Lobato, 255, Campinas, SP, Brazil 15 16 * Corresponding author 17 Email: [email protected] (APS) 18 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.05.02.074344; this version posted March 17, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 19 Abstract 20 Trichoderma atroviride and Trichoderma harzianum are mycoparasitic fungi widely used 21 in agriculture as biocontrol agents.